AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0577660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577660 MtrunA17_Chr8g0377501 97.294 961 25 1 1 960 8 968 0.0 1949
Msa0577660 MtrunA17_Chr3g0122351 60.142 986 320 12 1 957 1 942 0.0 1098
Msa0577660 MtrunA17_Chr2g0279141 41.318 622 278 21 388 956 439 1026 4.76e-132 423
Msa0577660 MtrunA17_Chr2g0279141 49.180 183 81 4 4 179 10 187 3.76e-45 176
Msa0577660 MtrunA17_Chr4g0068161 33.299 970 521 29 6 935 24 907 2.20e-126 405
Msa0577660 MtrunA17_Chr8g0382191 41.889 561 280 12 394 926 496 1038 2.72e-126 409
Msa0577660 MtrunA17_Chr8g0382191 45.918 196 87 4 6 188 8 197 2.93e-46 180
Msa0577660 MtrunA17_Chr4g0050401 39.228 622 304 19 388 959 426 1023 2.83e-121 394
Msa0577660 MtrunA17_Chr4g0050401 50.641 156 70 1 8 156 14 169 1.18e-42 169
Msa0577660 MtrunA17_Chr2g0294711 33.059 971 507 34 6 933 24 894 1.64e-119 387
Msa0577660 MtrunA17_Chr8g0382181 30.346 491 262 17 49 489 8 468 2.42e-47 176
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577660 AT1G67310.1 52.333 986 394 21 3 939 32 990 0.0 897
Msa0577660 AT5G09410.4 40.806 620 292 21 389 956 276 872 1.18e-124 400
Msa0577660 AT5G09410.2 40.806 620 292 21 389 956 397 993 2.33e-123 400
Msa0577660 AT5G09410.2 54.745 137 62 0 1 137 10 146 1.58e-45 178
Msa0577660 AT5G09410.1 40.806 620 292 21 389 956 379 975 3.88e-123 399
Msa0577660 AT5G09410.1 54.745 137 62 0 1 137 10 146 1.77e-45 178
Msa0577660 AT5G09410.3 40.806 620 292 21 389 956 456 1052 3.27e-122 398
Msa0577660 AT5G09410.3 44.910 167 62 1 1 137 69 235 1.59e-40 162
Msa0577660 AT2G22300.3 41.593 565 261 13 392 926 396 921 1.95e-121 394
Msa0577660 AT2G22300.3 38.919 185 106 3 53 235 1 180 4.50e-31 132
Msa0577660 AT2G22300.2 41.593 565 261 13 392 926 454 979 9.68e-121 393
Msa0577660 AT2G22300.2 40.343 233 132 3 5 235 11 238 4.78e-48 186
Msa0577660 AT2G22300.1 41.593 565 261 13 392 926 454 979 9.68e-121 393
Msa0577660 AT2G22300.1 40.343 233 132 3 5 235 11 238 4.78e-48 186
Msa0577660 AT5G64220.1 39.864 587 290 16 389 934 446 1010 1.88e-120 393
Msa0577660 AT5G64220.1 49.711 173 74 1 8 180 14 173 6.03e-48 186
Msa0577660 AT5G64220.2 39.864 587 290 16 389 934 446 1010 1.88e-120 393
Msa0577660 AT5G64220.2 49.711 173 74 1 8 180 14 173 6.03e-48 186
Msa0577660 AT3G16940.3 31.295 687 400 22 291 935 155 811 7.04e-79 274
Msa0577660 AT3G16940.3 48.993 149 75 1 12 160 1 148 8.20e-38 153
Msa0577660 AT3G16940.1 31.295 687 400 22 291 935 182 838 1.18e-78 274
Msa0577660 AT3G16940.1 47.742 155 80 1 6 160 22 175 9.19e-39 156
Msa0577660 AT3G16940.2 29.915 585 346 18 291 838 182 739 4.41e-56 207
Msa0577660 AT3G16940.2 53.030 132 62 0 6 137 22 153 3.89e-39 156

Find 243 sgRNAs with CRISPR-Local

Find 542 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGCATAGTAACAATTTA+TGG 0.140587 4_1:-81995391 None:intergenic
AGAAACCTCAGCTGACTTTA+AGG 0.172864 4_1:+81996374 Msa0577660:CDS
GTTCACCATCTTCTTCATTA+AGG 0.204228 4_1:+81998220 Msa0577660:CDS
ATTATAGAGGCTCTACTATT+TGG 0.207358 4_1:+81999586 Msa0577660:CDS
GGAAGCATTACAAAGTATTA+TGG 0.222235 4_1:+82001130 Msa0577660:CDS
TCTATTGCATTATCAGTTTC+CGG 0.225698 4_1:+82001782 Msa0577660:three_prime_UTR
AATAATCCCCTGCTCTTTCT+TGG 0.231755 4_1:-81999728 None:intergenic
AAAACAGAAATTTACTATTA+AGG 0.252298 4_1:+81998558 Msa0577660:CDS
CTTCATTGGGCTGCACGTTT+TGG 0.253483 4_1:+81999847 Msa0577660:CDS
GGGATTATTCACATGGTTGC+TGG 0.262638 4_1:+81999742 Msa0577660:CDS
GCCAGGCATGACCATCTTTC+CGG 0.272852 4_1:-81994749 None:intergenic
CTGTTATTACTTGTTAGATT+TGG 0.278401 4_1:+81999469 Msa0577660:CDS
CTTTGTAATGCTTCCTAACT+TGG 0.282011 4_1:-82001122 None:intergenic
ACTTCCTCCATATTCTTCTA+TGG 0.286754 4_1:+81998435 Msa0577660:CDS
GTTACTCTGTGCATTACTTC+TGG 0.291948 4_1:+81999337 Msa0577660:CDS
CCCTTGATGATTCGGTGGTT+TGG 0.297385 4_1:-81996499 None:intergenic
GGAGAAAAGGAGTCGGTTTA+CGG 0.298490 4_1:+82001190 Msa0577660:CDS
ATGGGTGGACTGCCCTTCAT+TGG 0.305451 4_1:+81999833 Msa0577660:CDS
TCAGAGGAATAACCCCATTC+TGG 0.307135 4_1:-81998589 None:intergenic
AATCTTTGTAAAGTATAAAA+TGG 0.314092 4_1:+82001928 Msa0577660:three_prime_UTR
CATCATGAGATGCTCCAATT+TGG 0.318825 4_1:-81998510 None:intergenic
TTGTTTGACCAAAGCCAAAT+TGG 0.322075 4_1:+81998496 Msa0577660:CDS
CTTTCCAGAGGCGGAGCTAT+TGG 0.324977 4_1:+81995430 Msa0577660:CDS
AGTTCCTGTTGAGCTAATTC+AGG 0.325656 4_1:+81999270 Msa0577660:CDS
TTTGGCAGTGAAAATTCTTC+TGG 0.330125 4_1:+81999604 Msa0577660:CDS
GTCATCCCTCTGATTCTGCC+TGG 0.330295 4_1:+81999224 Msa0577660:CDS
ATTCACATGGTTGCTGGGTT+GGG 0.335295 4_1:+81999748 Msa0577660:CDS
TTCACTTGTTTGTGCAAGTT+CGG 0.338414 4_1:-82001661 None:intergenic
TGTTACTTGTTGGCTGTTGC+GGG 0.338603 4_1:-81994141 None:intergenic
ATTATGGGCAGTTGGAATCT+TGG 0.340243 4_1:+82001146 Msa0577660:CDS
TGTTATTACTTGTTAGATTT+GGG 0.340702 4_1:+81999470 Msa0577660:CDS
GTTTCATCCATAGAAGAATA+TGG 0.341126 4_1:-81998442 None:intergenic
TTCACCATCTTCTTCATTAA+GGG 0.346632 4_1:+81998221 Msa0577660:CDS
TAAAATAGCCCCTGGTTATC+TGG 0.347146 4_1:-81996561 None:intergenic
AGCTTCATGCTCGTTGTAGA+AGG 0.349283 4_1:-81996466 None:intergenic
GTGAAACAGTAGAATTGATT+TGG 0.352194 4_1:-81993467 None:intergenic
AGAAGAAGAGTAATTGAATC+TGG 0.352299 4_1:-81993534 None:intergenic
CACATCATCCCTTGATGATT+CGG 0.355017 4_1:-81996507 None:intergenic
ATAGTAGAGCCTCTATAATA+TGG 0.356170 4_1:-81999582 None:intergenic
GAAGAGTATTACGTTTCTTC+CGG 0.359417 4_1:+81994730 Msa0577660:CDS
GAAGTTCCATCTCACATTCC+TGG 0.365550 4_1:+81999310 Msa0577660:CDS
TTCATCTACTTCCCGAGATC+TGG 0.365870 4_1:-81999686 None:intergenic
AAAGTAGATTGTATGTATAT+TGG 0.372896 4_1:+82001875 Msa0577660:three_prime_UTR
ATTCTTCTGGTACTATCAAT+TGG 0.373127 4_1:+81999617 Msa0577660:CDS
TGCAGCTAGCAGCGGGCATA+AGG 0.374436 4_1:+82000239 Msa0577660:CDS
TAACAGCTCATCTGGAGTTC+TGG 0.376239 4_1:-81999452 None:intergenic
TATTCACATGGTTGCTGGGT+TGG 0.377002 4_1:+81999747 Msa0577660:CDS
CCAATTGGATCTTGTGCACT+TGG 0.378723 4_1:-82000198 None:intergenic
ATGTGAGAGGTTACCAAGTT+AGG 0.379390 4_1:+82001109 Msa0577660:CDS
GAGAAAAGGAGTCGGTTTAC+GGG 0.381739 4_1:+82001191 Msa0577660:CDS
GTTGCATCACTTATAGCTTC+TGG 0.385172 4_1:+82000150 Msa0577660:CDS
AGTCATTCCATTGTTATAAG+AGG 0.386448 4_1:-81996325 None:intergenic
CCATCCTGAATTAGCTCAAC+AGG 0.389513 4_1:-81999274 None:intergenic
GCTTCTCTTTCCAATGGAGC+AGG 0.391039 4_1:-81999427 None:intergenic
CATTTCCATCAGGGAAATCA+TGG 0.392414 4_1:-81998027 None:intergenic
GAAGCATTACAAAGTATTAT+GGG 0.396758 4_1:+82001131 Msa0577660:CDS
ATAGCTTCTGGTGCATCTGC+TGG 0.404064 4_1:+82000162 Msa0577660:CDS
ATGCACAGAGTAACCTTTCC+AGG 0.407884 4_1:-81999328 None:intergenic
CATCCATTGCAGCTAGCAGC+GGG 0.408752 4_1:+82000232 Msa0577660:CDS
ACAAGTAATAACAGCTCATC+TGG 0.410138 4_1:-81999460 None:intergenic
TTGTAGGGAAGGCTCAGTTC+TGG 0.411053 4_1:+81996156 Msa0577660:intron
GAGATGCTCCAATTTGGCTT+TGG 0.415155 4_1:-81998504 None:intergenic
TGTGCATTACTTCTGGAAAC+CGG 0.420398 4_1:+81999344 Msa0577660:CDS
TCAAGCTTTGCGCCGATTGG+AGG 0.420689 4_1:+81996401 Msa0577660:CDS
CTGGTGGCTTCTCTTTCCAA+TGG 0.422838 4_1:-81999433 None:intergenic
TCACACCGCAACTGAGAATA+GGG 0.423019 4_1:-81999789 None:intergenic
AGCAGGGTCGGTGAAATTCT+TGG 0.425679 4_1:-81999410 None:intergenic
TACTCAAGCTTTGCGCCGAT+TGG 0.428909 4_1:+81996398 Msa0577660:CDS
CGAACCCGGAAAACTATTGC+TGG 0.430215 4_1:+81998253 Msa0577660:CDS
GAGGAATCCACAGCTCTCTC+TGG 0.431726 4_1:+81996537 Msa0577660:CDS
TCTGCCTGGGCCTGTATGCT+TGG 0.432274 4_1:+81999238 Msa0577660:CDS
TAAGGCTAGCGTTGCTCCCC+AGG 0.434493 4_1:-82001748 None:intergenic
TCATATAGTACTCAGAATCC+AGG 0.436097 4_1:+81996231 Msa0577660:CDS
TGGGTGGACTGCCCTTCATT+GGG 0.436536 4_1:+81999834 Msa0577660:CDS
GGATTATTCACATGGTTGCT+GGG 0.437285 4_1:+81999743 Msa0577660:CDS
TTTCACCGACCCTGCTCCAT+TGG 0.437455 4_1:+81999417 Msa0577660:CDS
TAAGGCAGTCTCCCCAGAAT+GGG 0.443176 4_1:+81998576 Msa0577660:CDS
GAAGCTCTGATTAGGTTCAT+AGG 0.447215 4_1:-81996277 None:intergenic
AGCGGGCATAAGGGACTGGC+AGG 0.447828 4_1:+82000249 Msa0577660:CDS
TGATATTGCTCACGAGCATC+AGG 0.448217 4_1:-82001339 None:intergenic
CCATCTGTCATCTCTTACAC+TGG 0.451970 4_1:+82000299 Msa0577660:CDS
CAGAGGAATAACCCCATTCT+GGG 0.453671 4_1:-81998588 None:intergenic
CAAAACGTGCAGCCCAATGA+AGG 0.453699 4_1:-81999846 None:intergenic
ATGTTACTTGTTGGCTGTTG+CGG 0.454201 4_1:-81994142 None:intergenic
CCCGGTGACAATTGTGTGCC+AGG 0.454642 4_1:-81996180 None:intergenic
AAGTAATGATAACAACGAAT+CGG 0.457105 4_1:+81999519 Msa0577660:CDS
GATCACATTCATTTAGAAAA+CGG 0.457488 4_1:+82000490 Msa0577660:CDS
ATAAATTTCCGTGATGTCAA+TGG 0.460639 4_1:+81999814 Msa0577660:CDS
AGAAGGCTGATGATGATTCA+TGG 0.462726 4_1:+81999557 Msa0577660:CDS
AAAAGAGATGGAAGAGCTGT+AGG 0.467414 4_1:+81994777 Msa0577660:CDS
AGTAGATGTGGAAATTGAAA+AGG 0.467562 4_1:+82001284 Msa0577660:CDS
GGACTGGAGAAGCTCTGATT+AGG 0.467985 4_1:-81996285 None:intergenic
TCATCCCTCTGATTCTGCCT+GGG 0.473426 4_1:+81999225 Msa0577660:CDS
TTACGTTTCTTCCGGAAAGA+TGG 0.474223 4_1:+81994738 Msa0577660:CDS
TAGCTCCGCCTCTGGAAAGT+AGG 0.474330 4_1:-81995426 None:intergenic
GTGCTAAGATGGCGGAGAAA+AGG 0.474475 4_1:+82001177 Msa0577660:CDS
TTCACACCGCAACTGAGAAT+AGG 0.474658 4_1:-81999790 None:intergenic
ATGAATGAAATGAAATCAAA+AGG 0.475216 4_1:-81993508 None:intergenic
TATATTCTTGTAGGTGATAG+TGG 0.478429 4_1:+81997980 Msa0577660:intron
CGTGGCTTACTTCCAGATCT+CGG 0.478848 4_1:+81999674 Msa0577660:CDS
TTCTTTGTCCAAGAAAGAGC+AGG 0.480183 4_1:+81999720 Msa0577660:CDS
TAAACAACGGACGTTGACCC+TGG 0.483608 4_1:-81996249 None:intergenic
TCTTCTTCTACCATGACATC+TGG 0.484799 4_1:+81993548 Msa0577660:exon
AATCAGAGCTTCTCCAGTCC+TGG 0.487676 4_1:+81996288 Msa0577660:CDS
GCTTCTTGAAGAGCTACTAA+AGG 0.488943 4_1:+81999639 Msa0577660:CDS
TTCAGAAGAAATATCGAGGT+TGG 0.489389 4_1:+82000649 Msa0577660:CDS
AATGCACCTTCAGCCGTTCG+TGG 0.490374 4_1:-81994806 None:intergenic
CAATAGAGTTGAAATTAGTA+AGG 0.494219 4_1:-82001766 None:intergenic
AGTAATGATAACAACGAATC+GGG 0.494514 4_1:+81999520 Msa0577660:CDS
GAAATGAAAAGGCTCTATCA+TGG 0.494556 4_1:+81998044 Msa0577660:CDS
TGACTTCACTGCATGACTCC+CGG 0.494680 4_1:-81999363 None:intergenic
GCAACTGAGAATAGGGTTCA+AGG 0.496854 4_1:-81999782 None:intergenic
ACATCCAATAGCTCCGCCTC+TGG 0.497187 4_1:-81995434 None:intergenic
TTCCGGCATCAACATTCTGT+TGG 0.497246 4_1:+82001799 Msa0577660:three_prime_UTR
GAGGTAACTTCTGCAGATCC+AGG 0.497445 4_1:-81996306 None:intergenic
TGGACAAGGTTGTGCTAAGA+TGG 0.498360 4_1:+82001166 Msa0577660:CDS
GCATCCATTGCAGCTAGCAG+CGG 0.501501 4_1:+82000231 Msa0577660:CDS
TAAATTTCCGTGATGTCAAT+GGG 0.503471 4_1:+81999815 Msa0577660:CDS
CTAGACCATGATTTCCCTGA+TGG 0.505531 4_1:+81998022 Msa0577660:CDS
TAGCAGCGGGCATAAGGGAC+TGG 0.507308 4_1:+82000245 Msa0577660:CDS
TTTCCCTGATGGAAATGAAA+AGG 0.507835 4_1:+81998033 Msa0577660:CDS
AATTTCAACACTGATAATGC+TGG 0.508070 4_1:+81998279 Msa0577660:CDS
AACTTAACTGCACCTCCAAT+CGG 0.509739 4_1:-81996413 None:intergenic
TACAAAGTATTATGGGCAGT+TGG 0.512430 4_1:+82001138 Msa0577660:CDS
TGTATTTCTGACAGCAGCTA+AGG 0.517159 4_1:-82000433 None:intergenic
GTGGCTTACTTCCAGATCTC+GGG 0.517721 4_1:+81999675 Msa0577660:CDS
ATGCCCGCTGCTAGCTGCAA+TGG 0.519565 4_1:-82000235 None:intergenic
ACCTGGCACACAATTGTCAC+CGG 0.520234 4_1:+81996179 Msa0577660:CDS
TCCAAACCACCGAATCATCA+AGG 0.520384 4_1:+81996498 Msa0577660:CDS
CCAAGTGCACAAGATCCAAT+TGG 0.522680 4_1:+82000198 Msa0577660:CDS
AAAATGTACATCACTTCTGC+AGG 0.523652 4_1:-81994082 None:intergenic
TTCAACATCACCAAGCATAC+AGG 0.525286 4_1:-81999248 None:intergenic
TCCGGAAAGATGGTCATGCC+TGG 0.525525 4_1:+81994748 Msa0577660:CDS
GGGTTTCAAACCAGAGATGC+AGG 0.526149 4_1:+82001212 Msa0577660:CDS
AAGAAATATCGAGGTTGGAA+AGG 0.529924 4_1:+82000654 Msa0577660:CDS
GCAGCTAGCAGCGGGCATAA+GGG 0.531238 4_1:+82000240 Msa0577660:CDS
ATCACCAAGCATACAGGCCC+AGG 0.535400 4_1:-81999242 None:intergenic
CTTGACATAGCATAAAGCTC+TGG 0.536851 4_1:-82000579 None:intergenic
AGCTCCGCCTCTGGAAAGTA+GGG 0.537194 4_1:-81995425 None:intergenic
TTAAGGCAGTCTCCCCAGAA+TGG 0.537679 4_1:+81998575 Msa0577660:CDS
TAAACAAACACGCGTAGAGA+TGG 0.539052 4_1:-81993443 None:intergenic
AAAGAAAGAGACAAGAGAGT+TGG 0.540143 4_1:-81993413 None:intergenic
GCTACTAAAGGATAAGCTAC+AGG 0.543205 4_1:+81999651 Msa0577660:CDS
TCCATCTCACATTCCTGGAA+AGG 0.544442 4_1:+81999315 Msa0577660:CDS
ATTGGAGCATCTCATGATGC+TGG 0.547038 4_1:+81998514 Msa0577660:CDS
TCTCTCTGGACCAGATAACC+AGG 0.547626 4_1:+81996551 Msa0577660:CDS
TTCATGGAGCCATATTATAG+AGG 0.548594 4_1:+81999573 Msa0577660:CDS
GCAATACTTACATTTCCTGC+TGG 0.549061 4_1:-81998082 None:intergenic
AACTGTTAGTAATGTCTCCA+AGG 0.549109 4_1:+82000368 Msa0577660:CDS
ATGCACCTTCAGCCGTTCGT+GGG 0.549348 4_1:-81994805 None:intergenic
AACTTCTGCAGATCCAGGAC+TGG 0.551466 4_1:-81996301 None:intergenic
ATCATCCCTTGATGATTCGG+TGG 0.554360 4_1:-81996504 None:intergenic
GTGCATTACTTCTGGAAACC+GGG 0.556150 4_1:+81999345 Msa0577660:CDS
ATCAAGAAGCTCAAAGGAGA+TGG 0.558476 4_1:+81994053 Msa0577660:CDS
GATGGATATAATGGAAGGCA+AGG 0.559300 4_1:+81996585 Msa0577660:CDS
TCTTTCCAATGGAGCAGGGT+CGG 0.560531 4_1:-81999422 None:intergenic
GGTGCAGTTAAGTTTGAATG+AGG 0.561643 4_1:+81996422 Msa0577660:CDS
AGAAGCCCACGAACGGCTGA+AGG 0.562890 4_1:+81994800 Msa0577660:CDS
GACCAACAGAATGTTGATGC+CGG 0.564290 4_1:-82001801 None:intergenic
ATCTGTATCAAGAAGCTCAA+AGG 0.564701 4_1:+81994047 Msa0577660:CDS
GGTTCCCTTAATGAAGAAGA+TGG 0.565841 4_1:-81998225 None:intergenic
ACCTTTCCAGGAATGTGAGA+TGG 0.568391 4_1:-81999316 None:intergenic
GTTACTTGTTGGCTGTTGCG+GGG 0.569067 4_1:-81994140 None:intergenic
TTACTTGTTGGCTGTTGCGG+GGG 0.569205 4_1:-81994139 None:intergenic
TACAACGAGCATGAAGCTAC+CGG 0.569270 4_1:+81996471 Msa0577660:CDS
ATTCGGTGGTTTGGAATCAC+CGG 0.569274 4_1:-81996490 None:intergenic
TTTATGATGGATATAATGGA+AGG 0.570899 4_1:+81996580 Msa0577660:CDS
GATATAAGTGCAAGTAGTGT+TGG 0.571594 4_1:+82000549 Msa0577660:CDS
TCGGGAAGTAGATGAAGAGA+CGG 0.571607 4_1:+81999693 Msa0577660:CDS
GGAAGGCTCAGTTCTGGACC+TGG 0.571723 4_1:+81996162 Msa0577660:CDS
GGACTATACGCAGAAGAACC+CGG 0.572116 4_1:-81996198 None:intergenic
AGAAAAGGAGTCGGTTTACG+GGG 0.574601 4_1:+82001192 Msa0577660:CDS
CTTCTCTTTCCAATGGAGCA+GGG 0.575366 4_1:-81999426 None:intergenic
GAAACAAATGCTGTTATGAG+TGG 0.575428 4_1:+82000522 Msa0577660:CDS
ATCCATCATAAAATAGCCCC+TGG 0.576549 4_1:-81996569 None:intergenic
GAAGTTACCTCTTATAACAA+TGG 0.577185 4_1:+81996318 Msa0577660:CDS
ACATGTGTTACCAGATGTCA+TGG 0.577892 4_1:-81993558 None:intergenic
ATGTTCACGTGAGTTTCGAA+AGG 0.582903 4_1:-82000607 None:intergenic
GCCTGGCGGAAGAAAAGAGA+TGG 0.583866 4_1:+81994765 Msa0577660:CDS
TGCTGTCAGAAATACAACTC+AGG 0.587231 4_1:+82000440 Msa0577660:CDS
TGTCTCAAGAGTGCTGTCCA+TGG 0.588545 4_1:+82001308 Msa0577660:CDS
CAGCTCATCTGGAGTTCTGG+TGG 0.594570 4_1:-81999449 None:intergenic
ACAGGCCCAGGCAGAATCAG+AGG 0.594590 4_1:-81999230 None:intergenic
ATATTGCTTTCAGTGAGGAT+CGG 0.596772 4_1:+82000394 Msa0577660:CDS
TTTGTGTAGGCTCATGTGAG+AGG 0.599137 4_1:+82001096 Msa0577660:intron
AAGGCTAGCGTTGCTCCCCA+GGG 0.599236 4_1:-82001747 None:intergenic
AAGGGAACCAGTTACGAACC+CGG 0.599640 4_1:+81998239 Msa0577660:CDS
AAAACGTGCAGCCCAATGAA+GGG 0.600218 4_1:-81999845 None:intergenic
TTCTGAGTACTATATGAGCT+AGG 0.601385 4_1:-81996225 None:intergenic
GGACATGATTTCGAGTTGAA+CGG 0.601641 4_1:+82001965 Msa0577660:three_prime_UTR
TTGAACCCTATTCTCAGTTG+CGG 0.604424 4_1:+81999784 Msa0577660:CDS
GCTTCATGCTCGTTGTAGAA+GGG 0.605012 4_1:-81996465 None:intergenic
TCTTTGTCCAAGAAAGAGCA+GGG 0.605633 4_1:+81999721 Msa0577660:CDS
CCTGGCACACAATTGTCACC+GGG 0.606469 4_1:+81996180 Msa0577660:CDS
CCAGTGTAAGAGATGACAGA+TGG 0.610309 4_1:-82000299 None:intergenic
TTATTCCTCTGAGACTACAA+AGG 0.612910 4_1:+81998600 Msa0577660:CDS
AGGGATGATGTGCAAGCAAG+AGG 0.613198 4_1:+81996518 Msa0577660:CDS
CAGTCCACCCATTGACATCA+CGG 0.613503 4_1:-81999822 None:intergenic
CGGGAAGTAGATGAAGAGAC+GGG 0.614610 4_1:+81999694 Msa0577660:CDS
AAAATGGTCTTGAATGCAGT+AGG 0.618258 4_1:+82001944 Msa0577660:three_prime_UTR
CCAAACCACCGAATCATCAA+GGG 0.620745 4_1:+81996499 Msa0577660:CDS
CATATAGTACTCAGAATCCA+GGG 0.621356 4_1:+81996232 Msa0577660:CDS
AGTAACCTTAAAGTCAGCTG+AGG 0.622511 4_1:-81996379 None:intergenic
CCTGTTGAGCTAATTCAGGA+TGG 0.622578 4_1:+81999274 Msa0577660:CDS
CCGAAAACAGAAAGTAGATG+TGG 0.623324 4_1:+82001272 Msa0577660:CDS
CTGTAGGAGAAGCCCACGAA+CGG 0.626185 4_1:+81994793 Msa0577660:CDS
TGATCATGATGTGGAAGTGA+TGG 0.631329 4_1:+82001898 Msa0577660:three_prime_UTR
GCGGGCATAAGGGACTGGCA+GGG 0.631483 4_1:+82000250 Msa0577660:CDS
GGCAGTTGGAATCTTGGACA+AGG 0.634216 4_1:+82001152 Msa0577660:CDS
ACTGGCAGGGTATCTTTCTG+AGG 0.634962 4_1:+82000263 Msa0577660:CDS
AATGGAATGACTTACTCAGA+AGG 0.637909 4_1:+81996336 Msa0577660:CDS
CAGGCCCAGGCAGAATCAGA+GGG 0.639349 4_1:-81999229 None:intergenic
ATACAACTCAGGCAGCTGCA+CGG 0.642481 4_1:+82000451 Msa0577660:CDS
GTACTATATGAGCTAGGACT+CGG 0.643924 4_1:-81996219 None:intergenic
CTCTCTGGACCAGATAACCA+GGG 0.644821 4_1:+81996552 Msa0577660:CDS
AGAGCAGGGGATTATTCACA+TGG 0.645001 4_1:+81999735 Msa0577660:CDS
GTATATTGGTGATCATGATG+TGG 0.646907 4_1:+82001889 Msa0577660:three_prime_UTR
AGCTAAGGTATCTTTGAGTG+AGG 0.652018 4_1:-82000418 None:intergenic
TCAATTCAGAAGAAATATCG+AGG 0.658574 4_1:+82000645 Msa0577660:CDS
TGAGAAGTATCGTCAAGCCA+AGG 0.663944 4_1:+82001371 Msa0577660:CDS
ATAAATTGTTACTATGCACA+TGG 0.664247 4_1:+81995393 Msa0577660:CDS
ACAAACCTTTGTAGTCTCAG+AGG 0.664931 4_1:-81998605 None:intergenic
CTTTGTCCAAGAAAGAGCAG+GGG 0.667079 4_1:+81999722 Msa0577660:CDS
GGAAAATATTGCTTTCAGTG+AGG 0.667748 4_1:+82000389 Msa0577660:CDS
AGAACCCTACTTTCCAGAGG+CGG 0.671098 4_1:+81995421 Msa0577660:CDS
ATTTCCGTGATGTCAATGGG+TGG 0.671605 4_1:+81999818 Msa0577660:CDS
GTGACTTCATCAACACCTTG+AGG 0.672304 4_1:-81998412 None:intergenic
TGAGCTATCTAAAAGTTCTG+CGG 0.677458 4_1:+82000329 Msa0577660:CDS
AAGGCAGTCTCCCCAGAATG+GGG 0.679096 4_1:+81998577 Msa0577660:CDS
AGCAGAACCCTACTTTCCAG+AGG 0.679127 4_1:+81995418 Msa0577660:CDS
ATCTGGTCCAGAGAGAGCTG+TGG 0.680189 4_1:-81996544 None:intergenic
GGAAAGATGGTCATGCCTGG+CGG 0.682808 4_1:+81994751 Msa0577660:CDS
AGATGGCGGAGAAAAGGAGT+CGG 0.685188 4_1:+82001183 Msa0577660:CDS
TTCATAGGCGTCATAAACAA+CGG 0.687883 4_1:-81996262 None:intergenic
AGAGGAATAACCCCATTCTG+GGG 0.688939 4_1:-81998587 None:intergenic
ACAAGGTTGTGCTAAGATGG+CGG 0.689666 4_1:+82001169 Msa0577660:CDS
AGCATCAGGAGATTTGACCA+TGG 0.713604 4_1:-82001325 None:intergenic
TCATCCATAGAAGAATATGG+AGG 0.715779 4_1:-81998439 None:intergenic
TCTCTGGACCAGATAACCAG+GGG 0.716297 4_1:+81996553 Msa0577660:CDS
TAAAGGATAAGCTACAGGCG+TGG 0.717250 4_1:+81999656 Msa0577660:CDS
AGATCCAATTGGTAAAACTG+CGG 0.717630 4_1:+82000209 Msa0577660:CDS
TGTAATGAACGAGAACAATG+TGG 0.718490 4_1:-81995728 None:intergenic
TCATTACAGAGACACAAGTG+AGG 0.732114 4_1:+81995743 Msa0577660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTAGTATATAAGAATA+TGG - chr4_1:81996004-81996023 None:intergenic 10.0%
!! TTTATAAATAAGAGTTTAAT+TGG + chr4_1:81998838-81998857 Msa0577660:intron 10.0%
!!! AGTTTATTTATTTATTTTTG+GGG + chr4_1:81999902-81999921 Msa0577660:intron 10.0%
!!! ATATCAAGAATATTTTAAAA+GGG - chr4_1:82000088-82000107 None:intergenic 10.0%
!!! AATATCAAGAATATTTTAAA+AGG - chr4_1:82000089-82000108 None:intergenic 10.0%
!! TTTACTCTTTATACTTAATT+TGG + chr4_1:81993621-81993640 Msa0577660:intron 15.0%
!! TAAATTGTTGAAAATTCTAA+TGG - chr4_1:81993843-81993862 None:intergenic 15.0%
!!! TAGAAAAAGTTTATTTCTTA+GGG + chr4_1:81993879-81993898 Msa0577660:intron 15.0%
!!! TTTTTAATTTTAATAACCCA+GGG - chr4_1:81994969-81994988 None:intergenic 15.0%
!!! ATTTTTAATTTTAATAACCC+AGG - chr4_1:81994970-81994989 None:intergenic 15.0%
!! AAAATAATAAATTATCCATC+TGG + chr4_1:81995150-81995169 Msa0577660:intron 15.0%
!! GTTGGAAAAAATAATAAAAA+AGG + chr4_1:81996932-81996951 Msa0577660:intron 15.0%
!! ATTAAACAAGAAAAATACTA+AGG + chr4_1:81997336-81997355 Msa0577660:intron 15.0%
!! AAAAAACTGTTAAATTGATA+AGG - chr4_1:81998326-81998345 None:intergenic 15.0%
!!! ATCAATTTAACAGTTTTTTT+TGG + chr4_1:81998327-81998346 Msa0577660:intron 15.0%
!! AAAACAGAAATTTACTATTA+AGG + chr4_1:81998558-81998577 Msa0577660:CDS 15.0%
!! AAATCTATATAAAATTGGTT+TGG + chr4_1:81998784-81998803 Msa0577660:intron 15.0%
!! AATTAAATCCATAAATAATC+AGG + chr4_1:81999026-81999045 Msa0577660:intron 15.0%
!! TTTCTTATCTTAAAATGATT+TGG + chr4_1:81999123-81999142 Msa0577660:intron 15.0%
!!! AAATGTCTTTTAAATAATTC+AGG - chr4_1:82000049-82000068 None:intergenic 15.0%
!!! TAAAAGACATTTTCATAATT+TGG + chr4_1:82000057-82000076 Msa0577660:intron 15.0%
!!! TATTTCTAATTTATTTGTGT+AGG + chr4_1:82001083-82001102 Msa0577660:intron 15.0%
!!! GAAATCTTTTGATTATATTT+TGG + chr4_1:82001420-82001439 Msa0577660:intron 15.0%
!!! TTTTGTTACAATGTATAAAT+TGG + chr4_1:82001623-82001642 Msa0577660:intron 15.0%
!! AATCTTTGTAAAGTATAAAA+TGG + chr4_1:82001928-82001947 Msa0577660:three_prime_UTR 15.0%
!! ATGAATGAAATGAAATCAAA+AGG - chr4_1:81993511-81993530 None:intergenic 20.0%
!!! GTAGAAAAAGTTTATTTCTT+AGG + chr4_1:81993878-81993897 Msa0577660:intron 20.0%
!! TAGTTAGTTAGTTAGTTATT+TGG + chr4_1:81994239-81994258 Msa0577660:intron 20.0%
!! TACTTGTATACTTGTATATA+AGG + chr4_1:81994288-81994307 Msa0577660:intron 20.0%
!!! GTTTGACTTAATTTTATCTT+TGG - chr4_1:81994427-81994446 None:intergenic 20.0%
!! TCATATTATACATGTAAAAG+AGG + chr4_1:81994925-81994944 Msa0577660:intron 20.0%
!! CATATTATACATGTAAAAGA+GGG + chr4_1:81994926-81994945 Msa0577660:intron 20.0%
!!! TTTTAATTTTAATAACCCAG+GGG - chr4_1:81994968-81994987 None:intergenic 20.0%
!! AAAACATAATTCACTTTCTA+TGG + chr4_1:81995244-81995263 Msa0577660:intron 20.0%
!! TTTAAAGGATATACAACATA+TGG - chr4_1:81995524-81995543 None:intergenic 20.0%
!!! ATATTGTATGTTCGTTTTAA+AGG - chr4_1:81995539-81995558 None:intergenic 20.0%
!!! AAATGAATTGCAAAGATTTT+AGG + chr4_1:81995600-81995619 Msa0577660:intron 20.0%
!! ATTAAACCATATTACACAAA+TGG - chr4_1:81995858-81995877 None:intergenic 20.0%
!! TGATTACAATTTAACAAATC+AGG - chr4_1:81995977-81995996 None:intergenic 20.0%
!!! CTATTTTATGATGGATATAA+TGG + chr4_1:81996576-81996595 Msa0577660:CDS 20.0%
!! ATTTAATCAGTGAAATATCT+GGG + chr4_1:81996652-81996671 Msa0577660:intron 20.0%
!! GCAAATAAGAAGATTTATTA+TGG - chr4_1:81996830-81996849 None:intergenic 20.0%
!! AAGATTTACATGTAAAAAAG+TGG + chr4_1:81997025-81997044 Msa0577660:intron 20.0%
!! TCAAATTATGAAAGAAGATA+TGG - chr4_1:81997858-81997877 None:intergenic 20.0%
!! TAAAATTTGATACTTAAAGC+AGG + chr4_1:81998194-81998213 Msa0577660:intron 20.0%
!!! TATAGATTGTAAAGATTTTC+AGG - chr4_1:81998751-81998770 None:intergenic 20.0%
!!! ATTTTATATAGATTTCCACT+AGG - chr4_1:81998779-81998798 None:intergenic 20.0%
!! AGTGGAAATCTATATAAAAT+TGG + chr4_1:81998779-81998798 Msa0577660:intron 20.0%
!!! CTCTTATTTATAAATAGCAT+GGG - chr4_1:81998832-81998851 None:intergenic 20.0%
!!! ACTCTTATTTATAAATAGCA+TGG - chr4_1:81998833-81998852 None:intergenic 20.0%
!! GTCAATTTAGGAATTTAATA+CGG + chr4_1:81998931-81998950 Msa0577660:intron 20.0%
!!! TGTTATTACTTGTTAGATTT+GGG + chr4_1:81999470-81999489 Msa0577660:CDS 20.0%
!!! TTTTCAGTAAACAAAAATGT+TGG + chr4_1:81999970-81999989 Msa0577660:intron 20.0%
!!! AAGAATATTTTAAAAGGGAT+CGG - chr4_1:82000083-82000102 None:intergenic 20.0%
!!! TGTAGAAGATTTTTTAAACA+TGG + chr4_1:82001704-82001723 Msa0577660:CDS 20.0%
!!! ATGATTTTTATTAATATCCC+TGG + chr4_1:82001730-82001749 Msa0577660:exon 20.0%
!!! TGATTTTTATTAATATCCCT+GGG + chr4_1:82001731-82001750 Msa0577660:exon 20.0%
!! AAAGTAGATTGTATGTATAT+TGG + chr4_1:82001875-82001894 Msa0577660:three_prime_UTR 20.0%
!!! TTGGTTTTTTTGCTTTGAAT+TGG + chr4_1:81993680-81993699 Msa0577660:intron 25.0%
!!! TGGTTTTTTTGCTTTGAATT+GGG + chr4_1:81993681-81993700 Msa0577660:intron 25.0%
! TGGTTTATGATAATAGTAGT+TGG - chr4_1:81993823-81993842 None:intergenic 25.0%
! TATGACAAAAAATCTTGGAA+AGG + chr4_1:81993934-81993953 Msa0577660:intron 25.0%
! TGTGGGAAAATAAAAATGAT+AGG + chr4_1:81993957-81993976 Msa0577660:intron 25.0%
! GGAAAATAAAAATGATAGGA+AGG + chr4_1:81993961-81993980 Msa0577660:intron 25.0%
!! ACAGTTATAACTTTTAACAC+AGG - chr4_1:81994179-81994198 None:intergenic 25.0%
! TATACAAGTAAAAAGCTACA+AGG - chr4_1:81994278-81994297 None:intergenic 25.0%
! CATAAAAATAGCTTATACGT+TGG - chr4_1:81994403-81994422 None:intergenic 25.0%
! TGCATGTTAACATTATCAAT+TGG + chr4_1:81994671-81994690 Msa0577660:intron 25.0%
! TTATACGTTGTTCATGAAAA+AGG + chr4_1:81994850-81994869 Msa0577660:intron 25.0%
! TATAACTACAAAACAGGAAT+TGG - chr4_1:81995205-81995224 None:intergenic 25.0%
! AAGTACTATAACTACAAAAC+AGG - chr4_1:81995211-81995230 None:intergenic 25.0%
!! GTGAATTATGTTTTCAAAAC+AGG - chr4_1:81995238-81995257 None:intergenic 25.0%
! ATGTGCATAGTAACAATTTA+TGG - chr4_1:81995394-81995413 None:intergenic 25.0%
! ATAAATTGTTACTATGCACA+TGG + chr4_1:81995393-81995412 Msa0577660:CDS 25.0%
!! TAATAAGCTTGATAGTATGA+AGG - chr4_1:81995501-81995520 None:intergenic 25.0%
! GATCAAATTATGTATGTTGA+TGG - chr4_1:81995643-81995662 None:intergenic 25.0%
! GTACTATTATTATGCTTATC+TGG - chr4_1:81995789-81995808 None:intergenic 25.0%
! TAACTAATGAAGAACATGAT+AGG - chr4_1:81995883-81995902 None:intergenic 25.0%
! GAAAAGATATAAACAGCTTA+TGG - chr4_1:81996054-81996073 None:intergenic 25.0%
!!! TTTATGATGGATATAATGGA+AGG + chr4_1:81996580-81996599 Msa0577660:CDS 25.0%
! CATTTAATCAGTGAAATATC+TGG + chr4_1:81996651-81996670 Msa0577660:intron 25.0%
! TAAAAGAAAGTCGTCTATAA+GGG - chr4_1:81996696-81996715 None:intergenic 25.0%
! CTTTCATACATTATGTAACA+AGG - chr4_1:81997080-81997099 None:intergenic 25.0%
!! AGATTATTTTCCCTATTTCA+TGG + chr4_1:81997098-81997117 Msa0577660:intron 25.0%
! AAAACTCAATTTGAGAGAAA+AGG + chr4_1:81997223-81997242 Msa0577660:intron 25.0%
! TTTAATTAGAGTCCTAATTC+AGG - chr4_1:81997322-81997341 None:intergenic 25.0%
! CAAGAAAAATACTAAGGTTA+AGG + chr4_1:81997342-81997361 Msa0577660:intron 25.0%
! TACAAAAAAAGCCACTAATA+AGG + chr4_1:81997548-81997567 Msa0577660:intron 25.0%
!!! CATTTTTTAAGCCTTATTAG+TGG - chr4_1:81997562-81997581 None:intergenic 25.0%
! CACTAATAAGGCTTAAAAAA+TGG + chr4_1:81997560-81997579 Msa0577660:intron 25.0%
!!! AAGGCTTAAAAAATGGATTT+TGG + chr4_1:81997567-81997586 Msa0577660:intron 25.0%
!!! AGGCTTAAAAAATGGATTTT+GGG + chr4_1:81997568-81997587 Msa0577660:intron 25.0%
! GCTTTACATTGATATTGTAT+AGG + chr4_1:81997648-81997667 Msa0577660:intron 25.0%
!! TTATGAAATTGTTGTGGTTT+TGG + chr4_1:81997781-81997800 Msa0577660:intron 25.0%
!!! TGAAAAAACTAACTAGCTTT+AGG - chr4_1:81997824-81997843 None:intergenic 25.0%
!!! GATGTTTAATTTTAACGAAG+AGG - chr4_1:81997921-81997940 None:intergenic 25.0%
! AGATCTGAATAAACGTAAAT+TGG - chr4_1:81998140-81998159 None:intergenic 25.0%
!!! CAGTTTTTTTTGGCTTATTT+TGG + chr4_1:81998337-81998356 Msa0577660:intron 25.0%
! AATCCATAAATAATCAGGTT+AGG + chr4_1:81999031-81999050 Msa0577660:intron 25.0%
! TATCCTAACCTGATTATTTA+TGG - chr4_1:81999037-81999056 None:intergenic 25.0%
! ACATTTAAGCTTAACTAGTT+TGG + chr4_1:81999082-81999101 Msa0577660:intron 25.0%
!! CTGTTATTACTTGTTAGATT+TGG + chr4_1:81999469-81999488 Msa0577660:CDS 25.0%
! AAGTAATGATAACAACGAAT+CGG + chr4_1:81999519-81999538 Msa0577660:CDS 25.0%
!! GATGTTGATATTTTCATTCA+AGG + chr4_1:81999928-81999947 Msa0577660:intron 25.0%
! GATCACATTCATTTAGAAAA+CGG + chr4_1:82000490-82000509 Msa0577660:CDS 25.0%
!! TCTCATCATTTCAATTTTTC+AGG - chr4_1:82000753-82000772 None:intergenic 25.0%
! ATTTGTGAACAGAAATTAAG+AGG + chr4_1:82000844-82000863 Msa0577660:intron 25.0%
! AGAAATTAAGAGGATCTATA+AGG + chr4_1:82000854-82000873 Msa0577660:intron 25.0%
! TGAAAAATGCTAGTATAGTT+AGG - chr4_1:82000986-82001005 None:intergenic 25.0%
! ATGAAGAGAGAAACAATTAT+AGG + chr4_1:82001015-82001034 Msa0577660:intron 25.0%
!! TTTGATAATAATGCAGTTGA+AGG - chr4_1:82001056-82001075 None:intergenic 25.0%
!! GAAGCATTACAAAGTATTAT+GGG + chr4_1:82001131-82001150 Msa0577660:CDS 25.0%
!! CATCATCAATTTTTATAGGA+TGG - chr4_1:82001483-82001502 None:intergenic 25.0%
! AAAACATTTGATTATGTGAG+TGG - chr4_1:82001508-82001527 None:intergenic 25.0%
! AAATGGTTTATAGATCTTCA+TGG - chr4_1:82001578-82001597 None:intergenic 25.0%
! ATGACAATGTAAAGTCAAAA+TGG - chr4_1:82001595-82001614 None:intergenic 25.0%
! ACAAACAAGTGAAGAAAAAT+CGG + chr4_1:82001671-82001690 Msa0577660:CDS 25.0%
!! GATTTTTATTAATATCCCTG+GGG + chr4_1:82001732-82001751 Msa0577660:exon 25.0%
! CAATAGAGTTGAAATTAGTA+AGG - chr4_1:82001769-82001788 None:intergenic 25.0%
GTGAAACAGTAGAATTGATT+TGG - chr4_1:81993470-81993489 None:intergenic 30.0%
AGAAGAAGAGTAATTGAATC+TGG - chr4_1:81993537-81993556 None:intergenic 30.0%
!!! GGTTTTTTTGCTTTGAATTG+GGG + chr4_1:81993682-81993701 Msa0577660:intron 30.0%
GCTACTATGACAAAAAATCT+TGG + chr4_1:81993929-81993948 Msa0577660:intron 30.0%
! AAAAAATCTTGGAAAGGTGT+GGG + chr4_1:81993940-81993959 Msa0577660:intron 30.0%
ACAATTATTATTGTTGCCTC+AGG + chr4_1:81994004-81994023 Msa0577660:intron 30.0%
GATATCATATTCATAACCTG+AGG - chr4_1:81994023-81994042 None:intergenic 30.0%
! GAGTTAAAGATGTTACTTGT+TGG - chr4_1:81994154-81994173 None:intergenic 30.0%
ATAACTGTTAGATGTTAGCT+AGG + chr4_1:81994191-81994210 Msa0577660:intron 30.0%
TAAGTAGCTTATCCAAAACA+GGG - chr4_1:81994342-81994361 None:intergenic 30.0%
TTAAGTAGCTTATCCAAAAC+AGG - chr4_1:81994343-81994362 None:intergenic 30.0%
! TTTTCGGCTTATAGCTTATA+TGG - chr4_1:81994455-81994474 None:intergenic 30.0%
AATGAATCTATTCCTCTCAA+CGG - chr4_1:81994578-81994597 None:intergenic 30.0%
! AGTCACTCTAAGAAACAAAA+AGG - chr4_1:81994640-81994659 None:intergenic 30.0%
!! TATCAATTGGTCTTCTAAAC+AGG + chr4_1:81994684-81994703 Msa0577660:intron 30.0%
GAAAAAGGAAAATTTATCCG+CGG + chr4_1:81994865-81994884 Msa0577660:intron 30.0%
AAGCATCTTGAAAGTTGAAA+GGG - chr4_1:81995125-81995144 None:intergenic 30.0%
! AAAGCATCTTGAAAGTTGAA+AGG - chr4_1:81995126-81995145 None:intergenic 30.0%
! ATGGCTATATTCATGACTTT+TGG + chr4_1:81995263-81995282 Msa0577660:intron 30.0%
! CAAATTATGTATGTTGATGG+TGG - chr4_1:81995640-81995659 None:intergenic 30.0%
AGGAATCCATTTGTGTAATA+TGG + chr4_1:81995849-81995868 Msa0577660:intron 30.0%
!! GCTTATGGATGGATTATTAA+AGG - chr4_1:81996039-81996058 None:intergenic 30.0%
AGATATAAACAGCTTATGGA+TGG - chr4_1:81996050-81996069 None:intergenic 30.0%
! TTCTTAAGCTTGTTCTTGTA+TGG + chr4_1:81996071-81996090 Msa0577660:intron 30.0%
GAAGTTACCTCTTATAACAA+TGG + chr4_1:81996318-81996337 Msa0577660:CDS 30.0%
AGTCATTCCATTGTTATAAG+AGG - chr4_1:81996328-81996347 None:intergenic 30.0%
GTAAAAGAAAGTCGTCTATA+AGG - chr4_1:81996697-81996716 None:intergenic 30.0%
AGTATTCTGTAATTGTCGAT+TGG + chr4_1:81996758-81996777 Msa0577660:intron 30.0%
ACAACCAGCATATAACAATT+GGG - chr4_1:81996892-81996911 None:intergenic 30.0%
AACAACCAGCATATAACAAT+TGG - chr4_1:81996893-81996912 None:intergenic 30.0%
!! GGTTGTTTTGTGTGAATAAA+AGG + chr4_1:81996906-81996925 Msa0577660:intron 30.0%
TGTGTGAATAAAAGGAATGT+TGG + chr4_1:81996914-81996933 Msa0577660:intron 30.0%
AAAAGTGGAACAGTCTTTAA+AGG + chr4_1:81997040-81997059 Msa0577660:intron 30.0%
ATGTAACAAGGAATTTCCTA+TGG - chr4_1:81997068-81997087 None:intergenic 30.0%
TACTTGACAACCATGAAATA+GGG - chr4_1:81997111-81997130 None:intergenic 30.0%
TTACTTGACAACCATGAAAT+AGG - chr4_1:81997112-81997131 None:intergenic 30.0%
TTGTCTTGAAACATTTCATG+TGG + chr4_1:81997143-81997162 Msa0577660:intron 30.0%
AACAGTGTTACATGGTTATA+GGG + chr4_1:81997276-81997295 Msa0577660:intron 30.0%
ATGGATTTCAGGCTTAAAAA+AGG + chr4_1:81997415-81997434 Msa0577660:intron 30.0%
! TATTTTCCTCGTTTAATCAG+AGG - chr4_1:81997530-81997549 None:intergenic 30.0%
CAATTTCATAAGCAAACCTT+TGG - chr4_1:81997772-81997791 None:intergenic 30.0%
GTTTGCTTATGAAATTGTTG+TGG + chr4_1:81997775-81997794 Msa0577660:intron 30.0%
!! AACTAGCTTTAGGAGAAAAT+TGG - chr4_1:81997814-81997833 None:intergenic 30.0%
AAAGAAGATATGGTTTACAG+TGG - chr4_1:81997848-81997867 None:intergenic 30.0%
GAGACTATAAATGCTAAAAG+TGG + chr4_1:81997955-81997974 Msa0577660:intron 30.0%
AAAGTGGTGTATATTCTTGT+AGG + chr4_1:81997971-81997990 Msa0577660:intron 30.0%
TATATTCTTGTAGGTGATAG+TGG + chr4_1:81997980-81997999 Msa0577660:intron 30.0%
TTCACCATCTTCTTCATTAA+GGG + chr4_1:81998221-81998240 Msa0577660:CDS 30.0%
! AATTTCAACACTGATAATGC+TGG + chr4_1:81998279-81998298 Msa0577660:CDS 30.0%
GTTTCATCCATAGAAGAATA+TGG - chr4_1:81998445-81998464 None:intergenic 30.0%
ACAATCTATATATGACCTAG+TGG + chr4_1:81998761-81998780 Msa0577660:intron 30.0%
GATATTTGAGGAGTCAATTT+AGG + chr4_1:81998919-81998938 Msa0577660:intron 30.0%
! TATGCACAGGTTTTCATTAT+TGG + chr4_1:81999190-81999209 Msa0577660:intron 30.0%
! ATGCACAGGTTTTCATTATT+GGG + chr4_1:81999191-81999210 Msa0577660:intron 30.0%
AGTAATGATAACAACGAATC+GGG + chr4_1:81999520-81999539 Msa0577660:CDS 30.0%
! GGGAATTTTCATAAAACAGA+AGG + chr4_1:81999540-81999559 Msa0577660:CDS 30.0%
ATAGTAGAGCCTCTATAATA+TGG - chr4_1:81999585-81999604 None:intergenic 30.0%
ATTATAGAGGCTCTACTATT+TGG + chr4_1:81999586-81999605 Msa0577660:CDS 30.0%
ATTCTTCTGGTACTATCAAT+TGG + chr4_1:81999617-81999636 Msa0577660:CDS 30.0%
ATAAATTTCCGTGATGTCAA+TGG + chr4_1:81999814-81999833 Msa0577660:CDS 30.0%
TAAATTTCCGTGATGTCAAT+GGG + chr4_1:81999815-81999834 Msa0577660:CDS 30.0%
!! AAGTGTTTGTTATTCCATAC+AGG + chr4_1:82000118-82000137 Msa0577660:intron 30.0%
!! AGTGTTTGTTATTCCATACA+GGG + chr4_1:82000119-82000138 Msa0577660:intron 30.0%
TATTCCATACAGGGAAAAAA+TGG + chr4_1:82000128-82000147 Msa0577660:intron 30.0%
! ACTGAAAGCAATATTTTCCT+TGG - chr4_1:82000388-82000407 None:intergenic 30.0%
TCAATTCAGAAGAAATATCG+AGG + chr4_1:82000645-82000664 Msa0577660:CDS 30.0%
TTGAAATGATGAGAGCTATA+TGG + chr4_1:82000759-82000778 Msa0577660:intron 30.0%
!! GGAAGCATTACAAAGTATTA+TGG + chr4_1:82001130-82001149 Msa0577660:CDS 30.0%
AGTAGATGTGGAAATTGAAA+AGG + chr4_1:82001284-82001303 Msa0577660:CDS 30.0%
AATCAAATGCTAAAGAACAG+AGG - chr4_1:82001455-82001474 None:intergenic 30.0%
! GGCACATCATCAATTTTTAT+AGG - chr4_1:82001487-82001506 None:intergenic 30.0%
TCTATTGCATTATCAGTTTC+CGG + chr4_1:82001782-82001801 Msa0577660:three_prime_UTR 30.0%
AAAGAAAGAGACAAGAGAGT+TGG - chr4_1:81993416-81993435 None:intergenic 35.0%
AAAAACCAAGTCAAGTGATG+TGG - chr4_1:81993669-81993688 None:intergenic 35.0%
CGTGATTTACAAAACCATGA+TGG - chr4_1:81993709-81993728 None:intergenic 35.0%
TTTCTTAGGGTGTAGAAAAG+AGG + chr4_1:81993892-81993911 Msa0577660:intron 35.0%
CAAAAAATCTTGGAAAGGTG+TGG + chr4_1:81993939-81993958 Msa0577660:intron 35.0%
ATCTGTATCAAGAAGCTCAA+AGG + chr4_1:81994047-81994066 Msa0577660:CDS 35.0%
AAAATGTACATCACTTCTGC+AGG - chr4_1:81994085-81994104 None:intergenic 35.0%
GTTGGCACTTATATGATAAG+CGG - chr4_1:81994385-81994404 None:intergenic 35.0%
ATAAGCCGAAAAACAGCTTA+TGG + chr4_1:81994463-81994482 Msa0577660:intron 35.0%
!!! CATGTCCATAAGCTGTTTTT+CGG - chr4_1:81994471-81994490 None:intergenic 35.0%
TGTCACAAGCAGTTTCTATA+AGG + chr4_1:81994489-81994508 Msa0577660:intron 35.0%
!! GAAGAGTATTACGTTTCTTC+CGG + chr4_1:81994730-81994749 Msa0577660:CDS 35.0%
TATAAAATTCATAGCACCCC+TGG + chr4_1:81994949-81994968 Msa0577660:intron 35.0%
ATAAAATTCATAGCACCCCT+GGG + chr4_1:81994950-81994969 Msa0577660:intron 35.0%
! TAAAAAGCGTAATTGCCAGA+TGG - chr4_1:81995168-81995187 None:intergenic 35.0%
!!! GGTCAACATTTGTTTTGCAA+TGG + chr4_1:81995284-81995303 Msa0577660:intron 35.0%
ACAACTGCTACAATAACACA+TGG - chr4_1:81995668-81995687 None:intergenic 35.0%
TGTAATGAACGAGAACAATG+TGG - chr4_1:81995731-81995750 None:intergenic 35.0%
ATGTCCCTACAGAAAAACTT+CGG + chr4_1:81995824-81995843 Msa0577660:intron 35.0%
! CTTTCCGAAGTTTTTCTGTA+GGG - chr4_1:81995831-81995850 None:intergenic 35.0%
CACGTGAGTACAAATAAACA+CGG - chr4_1:81996136-81996155 None:intergenic 35.0%
TATTTGTACTCACGTGTTGT+AGG + chr4_1:81996140-81996159 Msa0577660:intron 35.0%
ATTTGTACTCACGTGTTGTA+GGG + chr4_1:81996141-81996160 Msa0577660:intron 35.0%
TTCTGAGTACTATATGAGCT+AGG - chr4_1:81996228-81996247 None:intergenic 35.0%
TCATATAGTACTCAGAATCC+AGG + chr4_1:81996231-81996250 Msa0577660:CDS 35.0%
CATATAGTACTCAGAATCCA+GGG + chr4_1:81996232-81996251 Msa0577660:CDS 35.0%
TTCATAGGCGTCATAAACAA+CGG - chr4_1:81996265-81996284 None:intergenic 35.0%
AATGGAATGACTTACTCAGA+AGG + chr4_1:81996336-81996355 Msa0577660:CDS 35.0%
ATTACAGAATACTATCCGTG+CGG - chr4_1:81996751-81996770 None:intergenic 35.0%
! CAAGAGAATTTTACCACAGA+AGG - chr4_1:81996855-81996874 None:intergenic 35.0%
CATATAACAATTGGGGAATC+AGG - chr4_1:81996884-81996903 None:intergenic 35.0%
ATTCCCCAATTGTTATATGC+TGG + chr4_1:81996885-81996904 Msa0577660:intron 35.0%
CAACCAGCATATAACAATTG+GGG - chr4_1:81996891-81996910 None:intergenic 35.0%
! ACAGTCTTTAAAGGTTCCAT+AGG + chr4_1:81997049-81997068 Msa0577660:intron 35.0%
! CTAGTCTTCATATGACTCAT+CGG - chr4_1:81997169-81997188 None:intergenic 35.0%
TTGCAAAGAACAGTGTTACA+TGG + chr4_1:81997268-81997287 Msa0577660:intron 35.0%
GAACAGTGTTACATGGTTAT+AGG + chr4_1:81997275-81997294 Msa0577660:intron 35.0%
! ATGCTTAAGCAATGGATTTC+AGG + chr4_1:81997404-81997423 Msa0577660:intron 35.0%
CAACAGGAGTTTACATGATT+GGG - chr4_1:81997605-81997624 None:intergenic 35.0%
TGGGCTTAAGTGAAGTTATA+CGG - chr4_1:81997674-81997693 None:intergenic 35.0%
TTAAGCCCATTCAACATCAT+TGG + chr4_1:81997685-81997704 Msa0577660:intron 35.0%
TAAACATCAACTGCTAAGAG+AGG + chr4_1:81997933-81997952 Msa0577660:intron 35.0%
TTTCCCTGATGGAAATGAAA+AGG + chr4_1:81998033-81998052 Msa0577660:CDS 35.0%
GAAATGAAAAGGCTCTATCA+TGG + chr4_1:81998044-81998063 Msa0577660:CDS 35.0%
AAAAATGTATACATGCCAGC+AGG + chr4_1:81998067-81998086 Msa0577660:CDS 35.0%
GTTCACCATCTTCTTCATTA+AGG + chr4_1:81998220-81998239 Msa0577660:CDS 35.0%
! TTTGTCCAGCAATAGTTTTC+CGG - chr4_1:81998261-81998280 None:intergenic 35.0%
ACTTCCTCCATATTCTTCTA+TGG + chr4_1:81998435-81998454 Msa0577660:CDS 35.0%
TCATCCATAGAAGAATATGG+AGG - chr4_1:81998442-81998461 None:intergenic 35.0%
TTGTTTGACCAAAGCCAAAT+TGG + chr4_1:81998496-81998515 Msa0577660:CDS 35.0%
!! TTATTCCTCTGAGACTACAA+AGG + chr4_1:81998600-81998619 Msa0577660:CDS 35.0%
! ACAAAGGTTTGTTCCTTTCT+AGG + chr4_1:81998616-81998635 Msa0577660:intron 35.0%
CAGTCAGAAATCATAGTGTA+AGG - chr4_1:81998657-81998676 None:intergenic 35.0%
CTTACACTATGATTTCTGAC+TGG + chr4_1:81998655-81998674 Msa0577660:intron 35.0%
!! GTAAAGATTTTCAGGAACCT+AGG - chr4_1:81998743-81998762 None:intergenic 35.0%
TTTCACCGCATAGATATTTG+AGG + chr4_1:81998907-81998926 Msa0577660:intron 35.0%
TGACTCCTCAAATATCTATG+CGG - chr4_1:81998915-81998934 None:intergenic 35.0%
ACAAGTAATAACAGCTCATC+TGG - chr4_1:81999463-81999482 None:intergenic 35.0%
TTCATGGAGCCATATTATAG+AGG + chr4_1:81999573-81999592 Msa0577660:CDS 35.0%
TTTGGCAGTGAAAATTCTTC+TGG + chr4_1:81999604-81999623 Msa0577660:CDS 35.0%
AGATCCAATTGGTAAAACTG+CGG + chr4_1:82000209-82000228 Msa0577660:CDS 35.0%
TGAGCTATCTAAAAGTTCTG+CGG + chr4_1:82000329-82000348 Msa0577660:CDS 35.0%
AACTGTTAGTAATGTCTCCA+AGG + chr4_1:82000368-82000387 Msa0577660:CDS 35.0%
GGAAAATATTGCTTTCAGTG+AGG + chr4_1:82000389-82000408 Msa0577660:CDS 35.0%
ATATTGCTTTCAGTGAGGAT+CGG + chr4_1:82000394-82000413 Msa0577660:CDS 35.0%
GAAACAAATGCTGTTATGAG+TGG + chr4_1:82000522-82000541 Msa0577660:CDS 35.0%
GATATAAGTGCAAGTAGTGT+TGG + chr4_1:82000549-82000568 Msa0577660:CDS 35.0%
TTCAGAAGAAATATCGAGGT+TGG + chr4_1:82000649-82000668 Msa0577660:CDS 35.0%
AAGAAATATCGAGGTTGGAA+AGG + chr4_1:82000654-82000673 Msa0577660:CDS 35.0%
!! CCTGTATCTTCACTACTTTT+TGG - chr4_1:82000704-82000723 None:intergenic 35.0%
CCAAAAAGTAGTGAAGATAC+AGG + chr4_1:82000701-82000720 Msa0577660:CDS 35.0%
AGTAGTGAAGATACAGGTAA+TGG + chr4_1:82000707-82000726 Msa0577660:intron 35.0%
CTTTGTAATGCTTCCTAACT+TGG - chr4_1:82001125-82001144 None:intergenic 35.0%
! TACAAAGTATTATGGGCAGT+TGG + chr4_1:82001138-82001157 Msa0577660:CDS 35.0%
! CCACATCTACTTTCTGTTTT+CGG - chr4_1:82001275-82001294 None:intergenic 35.0%
! TTTTGCATGATGCTTCCATA+GGG + chr4_1:82001524-82001543 Msa0577660:intron 35.0%
TCACAGTATAAAATGCCCTA+TGG - chr4_1:82001542-82001561 None:intergenic 35.0%
! GCATTTTATACTGTGAGAGT+CGG + chr4_1:82001546-82001565 Msa0577660:intron 35.0%
! TAAATTGGCAACTCTTTTGC+AGG + chr4_1:82001638-82001657 Msa0577660:intron 35.0%
TTCACTTGTTTGTGCAAGTT+CGG - chr4_1:82001664-82001683 None:intergenic 35.0%
! GTATATTGGTGATCATGATG+TGG + chr4_1:82001889-82001908 Msa0577660:three_prime_UTR 35.0%
! AAAATGGTCTTGAATGCAGT+AGG + chr4_1:82001944-82001963 Msa0577660:three_prime_UTR 35.0%
TAAACAAACACGCGTAGAGA+TGG - chr4_1:81993446-81993465 None:intergenic 40.0%
!!! CAAAAGGCAGAGAGCATTTT+TGG - chr4_1:81993495-81993514 None:intergenic 40.0%
TCTTCTTCTACCATGACATC+TGG + chr4_1:81993548-81993567 Msa0577660:exon 40.0%
ACATGTGTTACCAGATGTCA+TGG - chr4_1:81993561-81993580 None:intergenic 40.0%
ATCAAGAAGCTCAAAGGAGA+TGG + chr4_1:81994053-81994072 Msa0577660:CDS 40.0%
! ATGTTACTTGTTGGCTGTTG+CGG - chr4_1:81994145-81994164 None:intergenic 40.0%
GTTAGCTAGGAGTAACTGAT+CGG + chr4_1:81994204-81994223 Msa0577660:intron 40.0%
!! CAATTGGTCTTCTAAACAGG+TGG + chr4_1:81994687-81994706 Msa0577660:intron 40.0%
TTACGTTTCTTCCGGAAAGA+TGG + chr4_1:81994738-81994757 Msa0577660:CDS 40.0%
AAAAGAGATGGAAGAGCTGT+AGG + chr4_1:81994777-81994796 Msa0577660:CDS 40.0%
ACTCTTAACATTAGTAGCCG+CGG - chr4_1:81994885-81994904 None:intergenic 40.0%
AATGTTAAGAGTCCCAGTCA+TGG + chr4_1:81994893-81994912 Msa0577660:intron 40.0%
ATGTTAAGAGTCCCAGTCAT+GGG + chr4_1:81994894-81994913 Msa0577660:intron 40.0%
TGAACAACATTCCCATGACT+GGG - chr4_1:81994908-81994927 None:intergenic 40.0%
ATGAACAACATTCCCATGAC+TGG - chr4_1:81994909-81994928 None:intergenic 40.0%
TCACACTAATCTGCATGACT+AGG + chr4_1:81995353-81995372 Msa0577660:intron 40.0%
ACTAATCTGCATGACTAGGT+TGG + chr4_1:81995357-81995376 Msa0577660:intron 40.0%
CAGCAGCAGAAATTTACTCA+CGG - chr4_1:81995465-81995484 None:intergenic 40.0%
AGTATGAAGGACGAGCAATT+AGG - chr4_1:81995488-81995507 None:intergenic 40.0%
TCATTACAGAGACACAAGTG+AGG + chr4_1:81995743-81995762 Msa0577660:CDS 40.0%
! CCTTTCCGAAGTTTTTCTGT+AGG - chr4_1:81995832-81995851 None:intergenic 40.0%
CCTACAGAAAAACTTCGGAA+AGG + chr4_1:81995829-81995848 Msa0577660:intron 40.0%
AAAGCGAACAGTGCAAAAGA+AGG - chr4_1:81995924-81995943 None:intergenic 40.0%
GTACTATATGAGCTAGGACT+CGG - chr4_1:81996222-81996241 None:intergenic 40.0%
! GAAGCTCTGATTAGGTTCAT+AGG - chr4_1:81996280-81996299 None:intergenic 40.0%
! AGAAACCTCAGCTGACTTTA+AGG + chr4_1:81996374-81996393 Msa0577660:CDS 40.0%
AGTAACCTTAAAGTCAGCTG+AGG - chr4_1:81996382-81996401 None:intergenic 40.0%
AACTTAACTGCACCTCCAAT+CGG - chr4_1:81996416-81996435 None:intergenic 40.0%
GGTGCAGTTAAGTTTGAATG+AGG + chr4_1:81996422-81996441 Msa0577660:CDS 40.0%
! CACATCATCCCTTGATGATT+CGG - chr4_1:81996510-81996529 None:intergenic 40.0%
TAAAATAGCCCCTGGTTATC+TGG - chr4_1:81996564-81996583 None:intergenic 40.0%
!! AACCAGGGGCTATTTTATGA+TGG + chr4_1:81996567-81996586 Msa0577660:CDS 40.0%
ATCCATCATAAAATAGCCCC+TGG - chr4_1:81996572-81996591 None:intergenic 40.0%
! GATGGATATAATGGAAGGCA+AGG + chr4_1:81996585-81996604 Msa0577660:CDS 40.0%
TTACAGAATACTATCCGTGC+GGG - chr4_1:81996750-81996769 None:intergenic 40.0%
! TTCTTATTTGCTGCCTTCTG+TGG + chr4_1:81996839-81996858 Msa0577660:intron 40.0%
CGATGAGTCATATGAAGACT+AGG + chr4_1:81997167-81997186 Msa0577660:intron 40.0%
ATGAAGACTAGGTTAGCACT+TGG + chr4_1:81997178-81997197 Msa0577660:intron 40.0%
AGTGTTACATGGTTATAGGG+TGG + chr4_1:81997279-81997298 Msa0577660:intron 40.0%
TGAAAAGCTCCTTTCAATCC+TGG - chr4_1:81997472-81997491 None:intergenic 40.0%
TTAGGACCTCTGATTAAACG+AGG + chr4_1:81997521-81997540 Msa0577660:intron 40.0%
GCAACAGGAGTTTACATGAT+TGG - chr4_1:81997606-81997625 None:intergenic 40.0%
GCAGTCCAATGATGTTGAAT+GGG - chr4_1:81997693-81997712 None:intergenic 40.0%
TGCAGTCCAATGATGTTGAA+TGG - chr4_1:81997694-81997713 None:intergenic 40.0%
AAGTGAAATTTAGCGCTGTC+CGG + chr4_1:81997883-81997902 Msa0577660:intron 40.0%
GAAGAGGAGAAAACAAGATC+CGG - chr4_1:81997905-81997924 None:intergenic 40.0%
CATTTCCATCAGGGAAATCA+TGG - chr4_1:81998030-81998049 None:intergenic 40.0%
! GAGCCTTTTCATTTCCATCA+GGG - chr4_1:81998039-81998058 None:intergenic 40.0%
! AGAGCCTTTTCATTTCCATC+AGG - chr4_1:81998040-81998059 None:intergenic 40.0%
GCAATACTTACATTTCCTGC+TGG - chr4_1:81998085-81998104 None:intergenic 40.0%
GGTTCCCTTAATGAAGAAGA+TGG - chr4_1:81998228-81998247 None:intergenic 40.0%
! TTGTCCAGCAATAGTTTTCC+GGG - chr4_1:81998260-81998279 None:intergenic 40.0%
CATCATGAGATGCTCCAATT+TGG - chr4_1:81998513-81998532 None:intergenic 40.0%
ACAAACCTTTGTAGTCTCAG+AGG - chr4_1:81998608-81998627 None:intergenic 40.0%
ACACTATGATTTCTGACTGG+TGG + chr4_1:81998658-81998677 Msa0577660:intron 40.0%
TTTGTGCCTATGAGTTACCT+AGG + chr4_1:81998723-81998742 Msa0577660:intron 40.0%
GATATGTTGCTCATGCTTTG+TGG + chr4_1:81999053-81999072 Msa0577660:intron 40.0%
!! CGAGCTTTAGGAATCAAATC+AGG - chr4_1:81999164-81999183 None:intergenic 40.0%
TTCAACATCACCAAGCATAC+AGG - chr4_1:81999251-81999270 None:intergenic 40.0%
AGTTCCTGTTGAGCTAATTC+AGG + chr4_1:81999270-81999289 Msa0577660:CDS 40.0%
GTTACTCTGTGCATTACTTC+TGG + chr4_1:81999337-81999356 Msa0577660:CDS 40.0%
! TGTGCATTACTTCTGGAAAC+CGG + chr4_1:81999344-81999363 Msa0577660:CDS 40.0%
! AGAAGGCTGATGATGATTCA+TGG + chr4_1:81999557-81999576 Msa0577660:CDS 40.0%
GCTTCTTGAAGAGCTACTAA+AGG + chr4_1:81999639-81999658 Msa0577660:CDS 40.0%
GCTACTAAAGGATAAGCTAC+AGG + chr4_1:81999651-81999670 Msa0577660:CDS 40.0%
TTCTTTGTCCAAGAAAGAGC+AGG + chr4_1:81999720-81999739 Msa0577660:CDS 40.0%
TCTTTGTCCAAGAAAGAGCA+GGG + chr4_1:81999721-81999740 Msa0577660:CDS 40.0%
AATAATCCCCTGCTCTTTCT+TGG - chr4_1:81999731-81999750 None:intergenic 40.0%
GGATTATTCACATGGTTGCT+GGG + chr4_1:81999743-81999762 Msa0577660:CDS 40.0%
TTGAACCCTATTCTCAGTTG+CGG + chr4_1:81999784-81999803 Msa0577660:CDS 40.0%
CTTGATACGATCATCAGTCT+TGG - chr4_1:82000011-82000030 None:intergenic 40.0%
!!! GCAACCATTTTTTCCCTGTA+TGG - chr4_1:82000135-82000154 None:intergenic 40.0%
GTTGCATCACTTATAGCTTC+TGG + chr4_1:82000150-82000169 Msa0577660:CDS 40.0%
! AGCTAAGGTATCTTTGAGTG+AGG - chr4_1:82000421-82000440 None:intergenic 40.0%
! TGTATTTCTGACAGCAGCTA+AGG - chr4_1:82000436-82000455 None:intergenic 40.0%
TGCTGTCAGAAATACAACTC+AGG + chr4_1:82000440-82000459 Msa0577660:CDS 40.0%
CTTGACATAGCATAAAGCTC+TGG - chr4_1:82000582-82000601 None:intergenic 40.0%
ATGTTCACGTGAGTTTCGAA+AGG - chr4_1:82000610-82000629 None:intergenic 40.0%
!!! CTACTTTTTGGCGCAATGAT+AGG - chr4_1:82000692-82000711 None:intergenic 40.0%
ATGTGAGAGGTTACCAAGTT+AGG + chr4_1:82001109-82001128 Msa0577660:CDS 40.0%
ATTATGGGCAGTTGGAATCT+TGG + chr4_1:82001146-82001165 Msa0577660:CDS 40.0%
! TTTTCGTTAACCTGCATCTC+TGG - chr4_1:82001225-82001244 None:intergenic 40.0%
CCGAAAACAGAAAGTAGATG+TGG + chr4_1:82001272-82001291 Msa0577660:CDS 40.0%
CTTTGACGACTAACTTACCT+TGG - chr4_1:82001391-82001410 None:intergenic 40.0%
! GTTTTGCATGATGCTTCCAT+AGG + chr4_1:82001523-82001542 Msa0577660:intron 40.0%
TGATCATGATGTGGAAGTGA+TGG + chr4_1:82001898-82001917 Msa0577660:three_prime_UTR 40.0%
GTGAACCACATCACTTGACT+TGG + chr4_1:81993661-81993680 Msa0577660:intron 45.0%
CTTTGAATTGGGGACCATCA+TGG + chr4_1:81993692-81993711 Msa0577660:intron 45.0%
! TGTTACTTGTTGGCTGTTGC+GGG - chr4_1:81994144-81994163 None:intergenic 45.0%
! TTCACATTTGCGCCCTGTTT+TGG + chr4_1:81994327-81994346 Msa0577660:intron 45.0%
AGTCTAAGCAAACCGTTGAG+AGG + chr4_1:81994563-81994582 Msa0577660:intron 45.0%
CCATGAAACAACAGCACAAG+TGG - chr4_1:81995696-81995715 None:intergenic 45.0%
!! CCACTTGTGCTGTTGTTTCA+TGG + chr4_1:81995693-81995712 Msa0577660:intron 45.0%
!! TTGTGCTGTTGTTTCATGGC+AGG + chr4_1:81995697-81995716 Msa0577660:intron 45.0%
!! TGTGCTGTTGTTTCATGGCA+GGG + chr4_1:81995698-81995717 Msa0577660:intron 45.0%
GCTTCATGCTCGTTGTAGAA+GGG - chr4_1:81996468-81996487 None:intergenic 45.0%
AGCTTCATGCTCGTTGTAGA+AGG - chr4_1:81996469-81996488 None:intergenic 45.0%
TACAACGAGCATGAAGCTAC+CGG + chr4_1:81996471-81996490 Msa0577660:CDS 45.0%
! ATTCGGTGGTTTGGAATCAC+CGG - chr4_1:81996493-81996512 None:intergenic 45.0%
TCCAAACCACCGAATCATCA+AGG + chr4_1:81996498-81996517 Msa0577660:CDS 45.0%
CCAAACCACCGAATCATCAA+GGG + chr4_1:81996499-81996518 Msa0577660:CDS 45.0%
! ATCATCCCTTGATGATTCGG+TGG - chr4_1:81996507-81996526 None:intergenic 45.0%
! TGTCACATCTTTTTCCCGCA+CGG + chr4_1:81996733-81996752 Msa0577660:intron 45.0%
GAAACCACTCTCTCACAACT+AGG + chr4_1:81996958-81996977 Msa0577660:intron 45.0%
GTAACCTAGTTGTGAGAGAG+TGG - chr4_1:81996965-81996984 None:intergenic 45.0%
CATGGTTATAGGGTGGTAAG+TGG + chr4_1:81997286-81997305 Msa0577660:intron 45.0%
GGTGACATCTGACCTGAATT+AGG + chr4_1:81997307-81997326 Msa0577660:intron 45.0%
CATTGCTTAAGCATGAGTCG+TGG - chr4_1:81997398-81997417 None:intergenic 45.0%
CACGACTCATGCTTAAGCAA+TGG + chr4_1:81997396-81997415 Msa0577660:intron 45.0%
GTGACATTGCCAGGATTGAA+AGG + chr4_1:81997460-81997479 Msa0577660:intron 45.0%
AGAGGTCCTAAGCAGAGTTA+CGG - chr4_1:81997512-81997531 None:intergenic 45.0%
TGGCAACTAGTGTGGTGAAA+TGG - chr4_1:81997752-81997771 None:intergenic 45.0%
TTCACCACACTAGTTGCCAA+AGG + chr4_1:81997753-81997772 Msa0577660:intron 45.0%
CAAACCTTTGGCAACTAGTG+TGG - chr4_1:81997760-81997779 None:intergenic 45.0%
CTAGACCATGATTTCCCTGA+TGG + chr4_1:81998022-81998041 Msa0577660:CDS 45.0%
! TAGTTTTCCGGGTTCGTAAC+TGG - chr4_1:81998249-81998268 None:intergenic 45.0%
TGAGGTAGTGAGAAAACAGC+TGG - chr4_1:81998397-81998416 None:intergenic 45.0%
!! GCTGTTTTCTCACTACCTCA+AGG + chr4_1:81998397-81998416 Msa0577660:intron 45.0%
GTGACTTCATCAACACCTTG+AGG - chr4_1:81998415-81998434 None:intergenic 45.0%
! GAGATGCTCCAATTTGGCTT+TGG - chr4_1:81998507-81998526 None:intergenic 45.0%
! ATTGGAGCATCTCATGATGC+TGG + chr4_1:81998514-81998533 Msa0577660:CDS 45.0%
AGAGGAATAACCCCATTCTG+GGG - chr4_1:81998590-81998609 None:intergenic 45.0%
CAGAGGAATAACCCCATTCT+GGG - chr4_1:81998591-81998610 None:intergenic 45.0%
TCAGAGGAATAACCCCATTC+TGG - chr4_1:81998592-81998611 None:intergenic 45.0%
TGCAAGCAATCAGCCTAGAA+AGG - chr4_1:81998632-81998651 None:intergenic 45.0%
CAGGAACCTAGGTAACTCAT+AGG - chr4_1:81998732-81998751 None:intergenic 45.0%
TTGCTCATGCTTTGTGGCTT+TGG + chr4_1:81999059-81999078 Msa0577660:intron 45.0%
TGCATAGCACATCGAGCTTT+AGG - chr4_1:81999176-81999195 None:intergenic 45.0%
CCATCCTGAATTAGCTCAAC+AGG - chr4_1:81999277-81999296 None:intergenic 45.0%
CCTGTTGAGCTAATTCAGGA+TGG + chr4_1:81999274-81999293 Msa0577660:CDS 45.0%
GAAGTTCCATCTCACATTCC+TGG + chr4_1:81999310-81999329 Msa0577660:CDS 45.0%
TCCATCTCACATTCCTGGAA+AGG + chr4_1:81999315-81999334 Msa0577660:CDS 45.0%
ACCTTTCCAGGAATGTGAGA+TGG - chr4_1:81999319-81999338 None:intergenic 45.0%
ATGCACAGAGTAACCTTTCC+AGG - chr4_1:81999331-81999350 None:intergenic 45.0%
! GTGCATTACTTCTGGAAACC+GGG + chr4_1:81999345-81999364 Msa0577660:CDS 45.0%
CTTCTCTTTCCAATGGAGCA+GGG - chr4_1:81999429-81999448 None:intergenic 45.0%
! TAACAGCTCATCTGGAGTTC+TGG - chr4_1:81999455-81999474 None:intergenic 45.0%
TAAAGGATAAGCTACAGGCG+TGG + chr4_1:81999656-81999675 Msa0577660:CDS 45.0%
TTCATCTACTTCCCGAGATC+TGG - chr4_1:81999689-81999708 None:intergenic 45.0%
TCGGGAAGTAGATGAAGAGA+CGG + chr4_1:81999693-81999712 Msa0577660:CDS 45.0%
CTTTGTCCAAGAAAGAGCAG+GGG + chr4_1:81999722-81999741 Msa0577660:CDS 45.0%
AGAGCAGGGGATTATTCACA+TGG + chr4_1:81999735-81999754 Msa0577660:CDS 45.0%
GGGATTATTCACATGGTTGC+TGG + chr4_1:81999742-81999761 Msa0577660:CDS 45.0%
TATTCACATGGTTGCTGGGT+TGG + chr4_1:81999747-81999766 Msa0577660:CDS 45.0%
ATTCACATGGTTGCTGGGTT+GGG + chr4_1:81999748-81999767 Msa0577660:CDS 45.0%
GCAACTGAGAATAGGGTTCA+AGG - chr4_1:81999785-81999804 None:intergenic 45.0%
TCACACCGCAACTGAGAATA+GGG - chr4_1:81999792-81999811 None:intergenic 45.0%
TTCACACCGCAACTGAGAAT+AGG - chr4_1:81999793-81999812 None:intergenic 45.0%
ATTTCCGTGATGTCAATGGG+TGG + chr4_1:81999818-81999837 Msa0577660:CDS 45.0%
AAAACGTGCAGCCCAATGAA+GGG - chr4_1:81999848-81999867 None:intergenic 45.0%
CCAATTGGATCTTGTGCACT+TGG - chr4_1:82000201-82000220 None:intergenic 45.0%
CCAAGTGCACAAGATCCAAT+TGG + chr4_1:82000198-82000217 Msa0577660:CDS 45.0%
! GATGCCGCAGTTTTACCAAT+TGG - chr4_1:82000216-82000235 None:intergenic 45.0%
CCAGTGTAAGAGATGACAGA+TGG - chr4_1:82000302-82000321 None:intergenic 45.0%
CCATCTGTCATCTCTTACAC+TGG + chr4_1:82000299-82000318 Msa0577660:CDS 45.0%
TTTGTGTAGGCTCATGTGAG+AGG + chr4_1:82001096-82001115 Msa0577660:intron 45.0%
TGGACAAGGTTGTGCTAAGA+TGG + chr4_1:82001166-82001185 Msa0577660:CDS 45.0%
ACAAGGTTGTGCTAAGATGG+CGG + chr4_1:82001169-82001188 Msa0577660:CDS 45.0%
! GGAGAAAAGGAGTCGGTTTA+CGG + chr4_1:82001190-82001209 Msa0577660:CDS 45.0%
! GAGAAAAGGAGTCGGTTTAC+GGG + chr4_1:82001191-82001210 Msa0577660:CDS 45.0%
! AGAAAAGGAGTCGGTTTACG+GGG + chr4_1:82001192-82001211 Msa0577660:CDS 45.0%
AGCATCAGGAGATTTGACCA+TGG - chr4_1:82001328-82001347 None:intergenic 45.0%
TGATATTGCTCACGAGCATC+AGG - chr4_1:82001342-82001361 None:intergenic 45.0%
!! TGAGAAGTATCGTCAAGCCA+AGG + chr4_1:82001371-82001390 Msa0577660:CDS 45.0%
TTCCGGCATCAACATTCTGT+TGG + chr4_1:82001799-82001818 Msa0577660:three_prime_UTR 45.0%
GACCAACAGAATGTTGATGC+CGG - chr4_1:82001804-82001823 None:intergenic 45.0%
!! AAATAAAAAAAATCAATATA+TGG - chr4_1:81995314-81995333 None:intergenic 5.0%
!!! TTAGTTTATTTATTTATTTT+TGG + chr4_1:81999900-81999919 Msa0577660:intron 5.0%
!!! TAGTTTATTTATTTATTTTT+GGG + chr4_1:81999901-81999920 Msa0577660:intron 5.0%
! TTACTTGTTGGCTGTTGCGG+GGG - chr4_1:81994142-81994161 None:intergenic 50.0%
! GTTACTTGTTGGCTGTTGCG+GGG - chr4_1:81994143-81994162 None:intergenic 50.0%
! TCCATCTCTTTTCTTCCGCC+AGG - chr4_1:81994769-81994788 None:intergenic 50.0%
AGCAGAACCCTACTTTCCAG+AGG + chr4_1:81995418-81995437 Msa0577660:CDS 50.0%
AGAACCCTACTTTCCAGAGG+CGG + chr4_1:81995421-81995440 Msa0577660:CDS 50.0%
GTACTCACGTGTTGTAGGGA+AGG + chr4_1:81996145-81996164 Msa0577660:intron 50.0%
TTGTAGGGAAGGCTCAGTTC+TGG + chr4_1:81996156-81996175 Msa0577660:intron 50.0%
ACCTGGCACACAATTGTCAC+CGG + chr4_1:81996179-81996198 Msa0577660:CDS 50.0%
GGACTATACGCAGAAGAACC+CGG - chr4_1:81996201-81996220 None:intergenic 50.0%
TAAACAACGGACGTTGACCC+TGG - chr4_1:81996252-81996271 None:intergenic 50.0%
! GGACTGGAGAAGCTCTGATT+AGG - chr4_1:81996288-81996307 None:intergenic 50.0%
AATCAGAGCTTCTCCAGTCC+TGG + chr4_1:81996288-81996307 Msa0577660:CDS 50.0%
AACTTCTGCAGATCCAGGAC+TGG - chr4_1:81996304-81996323 None:intergenic 50.0%
GAGGTAACTTCTGCAGATCC+AGG - chr4_1:81996309-81996328 None:intergenic 50.0%
! TACTCAAGCTTTGCGCCGAT+TGG + chr4_1:81996398-81996417 Msa0577660:CDS 50.0%
!! CCCTTGATGATTCGGTGGTT+TGG - chr4_1:81996502-81996521 None:intergenic 50.0%
AGGGATGATGTGCAAGCAAG+AGG + chr4_1:81996518-81996537 Msa0577660:CDS 50.0%
TCTCTCTGGACCAGATAACC+AGG + chr4_1:81996551-81996570 Msa0577660:CDS 50.0%
CTCTCTGGACCAGATAACCA+GGG + chr4_1:81996552-81996571 Msa0577660:CDS 50.0%
TCTCTGGACCAGATAACCAG+GGG + chr4_1:81996553-81996572 Msa0577660:CDS 50.0%
AGGTCCTAAGCAGAGTTACG+GGG - chr4_1:81997510-81997529 None:intergenic 50.0%
GAGGTCCTAAGCAGAGTTAC+GGG - chr4_1:81997511-81997530 None:intergenic 50.0%
AAGCTTGTCACTGTCGCAAC+AGG - chr4_1:81997621-81997640 None:intergenic 50.0%
GCGACAGTGACAAGCTTGAA+AGG + chr4_1:81997624-81997643 Msa0577660:intron 50.0%
AAGGGAACCAGTTACGAACC+CGG + chr4_1:81998239-81998258 Msa0577660:CDS 50.0%
CGAACCCGGAAAACTATTGC+TGG + chr4_1:81998253-81998272 Msa0577660:CDS 50.0%
TTAAGGCAGTCTCCCCAGAA+TGG + chr4_1:81998575-81998594 Msa0577660:CDS 50.0%
TAAGGCAGTCTCCCCAGAAT+GGG + chr4_1:81998576-81998595 Msa0577660:CDS 50.0%
AAGCTCGATGTGCTATGCAC+AGG + chr4_1:81999177-81999196 Msa0577660:intron 50.0%
TCATCCCTCTGATTCTGCCT+GGG + chr4_1:81999225-81999244 Msa0577660:CDS 50.0%
TGACTTCACTGCATGACTCC+CGG - chr4_1:81999366-81999385 None:intergenic 50.0%
AGCAGGGTCGGTGAAATTCT+TGG - chr4_1:81999413-81999432 None:intergenic 50.0%
TCTTTCCAATGGAGCAGGGT+CGG - chr4_1:81999425-81999444 None:intergenic 50.0%
GCTTCTCTTTCCAATGGAGC+AGG - chr4_1:81999430-81999449 None:intergenic 50.0%
CTGGTGGCTTCTCTTTCCAA+TGG - chr4_1:81999436-81999455 None:intergenic 50.0%
CGTGGCTTACTTCCAGATCT+CGG + chr4_1:81999674-81999693 Msa0577660:CDS 50.0%
GTGGCTTACTTCCAGATCTC+GGG + chr4_1:81999675-81999694 Msa0577660:CDS 50.0%
CGGGAAGTAGATGAAGAGAC+GGG + chr4_1:81999694-81999713 Msa0577660:CDS 50.0%
!!! TTGCTGGGTTGGGTTTTGAG+TGG + chr4_1:81999758-81999777 Msa0577660:CDS 50.0%
!!! TGCTGGGTTGGGTTTTGAGT+GGG + chr4_1:81999759-81999778 Msa0577660:CDS 50.0%
CAGTCCACCCATTGACATCA+CGG - chr4_1:81999825-81999844 None:intergenic 50.0%
CAAAACGTGCAGCCCAATGA+AGG - chr4_1:81999849-81999868 None:intergenic 50.0%
! CTTCATTGGGCTGCACGTTT+TGG + chr4_1:81999847-81999866 Msa0577660:CDS 50.0%
!! ATTGGGCTGCACGTTTTGGA+AGG + chr4_1:81999851-81999870 Msa0577660:CDS 50.0%
TCATCAGTCTTGGCAGATGG+TGG - chr4_1:82000001-82000020 None:intergenic 50.0%
CGATCATCAGTCTTGGCAGA+TGG - chr4_1:82000004-82000023 None:intergenic 50.0%
ATAGCTTCTGGTGCATCTGC+TGG + chr4_1:82000162-82000181 Msa0577660:CDS 50.0%
! ACTGGCAGGGTATCTTTCTG+AGG + chr4_1:82000263-82000282 Msa0577660:CDS 50.0%
ATACAACTCAGGCAGCTGCA+CGG + chr4_1:82000451-82000470 Msa0577660:CDS 50.0%
GGCAGTTGGAATCTTGGACA+AGG + chr4_1:82001152-82001171 Msa0577660:CDS 50.0%
!! GTGCTAAGATGGCGGAGAAA+AGG + chr4_1:82001177-82001196 Msa0577660:CDS 50.0%
!! AGATGGCGGAGAAAAGGAGT+CGG + chr4_1:82001183-82001202 Msa0577660:CDS 50.0%
GGGTTTCAAACCAGAGATGC+AGG + chr4_1:82001212-82001231 Msa0577660:CDS 50.0%
!! TGTCTCAAGAGTGCTGTCCA+TGG + chr4_1:82001308-82001327 Msa0577660:CDS 50.0%
GGGCGCAAATGTGAAGTCTC+TGG - chr4_1:81994322-81994341 None:intergenic 55.0%
TCCGGAAAGATGGTCATGCC+TGG + chr4_1:81994748-81994767 Msa0577660:CDS 55.0%
GCCAGGCATGACCATCTTTC+CGG - chr4_1:81994752-81994771 None:intergenic 55.0%
GGAAAGATGGTCATGCCTGG+CGG + chr4_1:81994751-81994770 Msa0577660:CDS 55.0%
GCCTGGCGGAAGAAAAGAGA+TGG + chr4_1:81994765-81994784 Msa0577660:CDS 55.0%
CTGTAGGAGAAGCCCACGAA+CGG + chr4_1:81994793-81994812 Msa0577660:CDS 55.0%
ATGCACCTTCAGCCGTTCGT+GGG - chr4_1:81994808-81994827 None:intergenic 55.0%
AATGCACCTTCAGCCGTTCG+TGG - chr4_1:81994809-81994828 None:intergenic 55.0%
! AGCTCCGCCTCTGGAAAGTA+GGG - chr4_1:81995428-81995447 None:intergenic 55.0%
! TAGCTCCGCCTCTGGAAAGT+AGG - chr4_1:81995429-81995448 None:intergenic 55.0%
CTTTCCAGAGGCGGAGCTAT+TGG + chr4_1:81995430-81995449 Msa0577660:CDS 55.0%
ACATCCAATAGCTCCGCCTC+TGG - chr4_1:81995437-81995456 None:intergenic 55.0%
CCTGGCACACAATTGTCACC+GGG + chr4_1:81996180-81996199 Msa0577660:CDS 55.0%
!! TCAAGCTTTGCGCCGATTGG+AGG + chr4_1:81996401-81996420 Msa0577660:CDS 55.0%
GAGGAATCCACAGCTCTCTC+TGG + chr4_1:81996537-81996556 Msa0577660:CDS 55.0%
ATCTGGTCCAGAGAGAGCTG+TGG - chr4_1:81996547-81996566 None:intergenic 55.0%
GCTCTAGCTGTGACATTGCC+AGG + chr4_1:81997451-81997470 Msa0577660:intron 55.0%
GCTGACACATAGCCTGCTCT+AGG + chr4_1:81997724-81997743 Msa0577660:intron 55.0%
GGTGAAATGGTGCCTAGAGC+AGG - chr4_1:81997739-81997758 None:intergenic 55.0%
TGAGGTGCATCAGAGGTGGA+AGG - chr4_1:81998367-81998386 None:intergenic 55.0%
CATGTGAGGTGCATCAGAGG+TGG - chr4_1:81998371-81998390 None:intergenic 55.0%
AAGGCAGTCTCCCCAGAATG+GGG + chr4_1:81998577-81998596 Msa0577660:CDS 55.0%
GTCATCCCTCTGATTCTGCC+TGG + chr4_1:81999224-81999243 Msa0577660:CDS 55.0%
ATCACCAAGCATACAGGCCC+AGG - chr4_1:81999245-81999264 None:intergenic 55.0%
TTTCACCGACCCTGCTCCAT+TGG + chr4_1:81999417-81999436 Msa0577660:CDS 55.0%
! CAGCTCATCTGGAGTTCTGG+TGG - chr4_1:81999452-81999471 None:intergenic 55.0%
!! ATGGGTGGACTGCCCTTCAT+TGG + chr4_1:81999833-81999852 Msa0577660:CDS 55.0%
!! TGGGTGGACTGCCCTTCATT+GGG + chr4_1:81999834-81999853 Msa0577660:CDS 55.0%
GCATCCATTGCAGCTAGCAG+CGG + chr4_1:82000231-82000250 Msa0577660:CDS 55.0%
CATCCATTGCAGCTAGCAGC+GGG + chr4_1:82000232-82000251 Msa0577660:CDS 55.0%
AGAAGCCCACGAACGGCTGA+AGG + chr4_1:81994800-81994819 Msa0577660:CDS 60.0%
!! GGAAGGCTCAGTTCTGGACC+TGG + chr4_1:81996162-81996181 Msa0577660:CDS 60.0%
CCCGGTGACAATTGTGTGCC+AGG - chr4_1:81996183-81996202 None:intergenic 60.0%
CCTAAGCAGAGTTACGGGGC+TGG - chr4_1:81997506-81997525 None:intergenic 60.0%
CCAGCCCCGTAACTCTGCTT+AGG + chr4_1:81997503-81997522 Msa0577660:intron 60.0%
CAGGCCCAGGCAGAATCAGA+GGG - chr4_1:81999232-81999251 None:intergenic 60.0%
ACAGGCCCAGGCAGAATCAG+AGG - chr4_1:81999233-81999252 None:intergenic 60.0%
TCTGCCTGGGCCTGTATGCT+TGG + chr4_1:81999238-81999257 Msa0577660:CDS 60.0%
ATGCCCGCTGCTAGCTGCAA+TGG - chr4_1:82000238-82000257 None:intergenic 60.0%
TGCAGCTAGCAGCGGGCATA+AGG + chr4_1:82000239-82000258 Msa0577660:CDS 60.0%
GCAGCTAGCAGCGGGCATAA+GGG + chr4_1:82000240-82000259 Msa0577660:CDS 60.0%
TAGCAGCGGGCATAAGGGAC+TGG + chr4_1:82000245-82000264 Msa0577660:CDS 60.0%
AAGGCTAGCGTTGCTCCCCA+GGG - chr4_1:82001750-82001769 None:intergenic 60.0%
TAAGGCTAGCGTTGCTCCCC+AGG - chr4_1:82001751-82001770 None:intergenic 60.0%
! AGCGGGCATAAGGGACTGGC+AGG + chr4_1:82000249-82000268 Msa0577660:CDS 65.0%
! GCGGGCATAAGGGACTGGCA+GGG + chr4_1:82000250-82000269 Msa0577660:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 81993393 82001985 81993393 ID=Msa0577660;Name=Msa0577660
chr4_1 mRNA 81993393 82001985 81993393 ID=Msa0577660-mRNA-1;Parent=Msa0577660;Name=Msa0577660-mRNA-1;_AED=0.02;_eAED=0.02;_QI=167|1|1|1|1|1|13|242|960
chr4_1 exon 81993393 81993569 81993393 ID=Msa0577660-mRNA-1:exon:29603;Parent=Msa0577660-mRNA-1
chr4_1 exon 81994026 81994157 81994026 ID=Msa0577660-mRNA-1:exon:29604;Parent=Msa0577660-mRNA-1
chr4_1 exon 81994706 81994821 81994706 ID=Msa0577660-mRNA-1:exon:29605;Parent=Msa0577660-mRNA-1
chr4_1 exon 81995375 81995463 81995375 ID=Msa0577660-mRNA-1:exon:29606;Parent=Msa0577660-mRNA-1
chr4_1 exon 81995719 81995764 81995719 ID=Msa0577660-mRNA-1:exon:29607;Parent=Msa0577660-mRNA-1
chr4_1 exon 81996162 81996606 81996162 ID=Msa0577660-mRNA-1:exon:29608;Parent=Msa0577660-mRNA-1
chr4_1 exon 81997993 81998093 81997993 ID=Msa0577660-mRNA-1:exon:29609;Parent=Msa0577660-mRNA-1
chr4_1 exon 81998216 81998306 81998216 ID=Msa0577660-mRNA-1:exon:29610;Parent=Msa0577660-mRNA-1
chr4_1 exon 81998398 81998621 81998398 ID=Msa0577660-mRNA-1:exon:29611;Parent=Msa0577660-mRNA-1
chr4_1 exon 81999199 81999872 81999199 ID=Msa0577660-mRNA-1:exon:29612;Parent=Msa0577660-mRNA-1
chr4_1 exon 82000140 82000722 82000140 ID=Msa0577660-mRNA-1:exon:29613;Parent=Msa0577660-mRNA-1
chr4_1 exon 82001105 82001392 82001105 ID=Msa0577660-mRNA-1:exon:29614;Parent=Msa0577660-mRNA-1
chr4_1 exon 82001660 82001985 82001660 ID=Msa0577660-mRNA-1:exon:29615;Parent=Msa0577660-mRNA-1
chr4_1 five_prime_UTR 81993393 81993559 81993393 ID=Msa0577660-mRNA-1:five_prime_utr;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81993560 81993569 81993560 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81994026 81994157 81994026 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81994706 81994821 81994706 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81995375 81995463 81995375 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81995719 81995764 81995719 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81996162 81996606 81996162 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81997993 81998093 81997993 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81998216 81998306 81998216 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81998398 81998621 81998398 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 81999199 81999872 81999199 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 82000140 82000722 82000140 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 82001105 82001392 82001105 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 CDS 82001660 82001743 82001660 ID=Msa0577660-mRNA-1:cds;Parent=Msa0577660-mRNA-1
chr4_1 three_prime_UTR 82001744 82001985 82001744 ID=Msa0577660-mRNA-1:three_prime_utr;Parent=Msa0577660-mRNA-1
Gene Sequence

>Msa0577660

ATGACATCTGGTTATGAATATGATATCGATGATCTGTATCAAGAAGCTCAAAGGAGATGGTTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAAAAGTATCAGTTCACTCAAGAGCCCCCGCAACAGCCAACAAGTGGTTCGCTGTTTCTGTTTAACAGAAGAGTATTACGTTTCTTCCGGAAAGATGGTCATGCCTGGCGGAAGAAAAGAGATGGAAGAGCTGTAGGAGAAGCCCACGAACGGCTGAAGGTTGGAAATGTTGAAGCCATAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGAATCCGGAATTTGACCACATTGTTCTCGTTCATTACAGAGACACAAGTGAGGGAAGGCTCAGTTCTGGACCTGGCACACAATTGTCACCGGGTTCTTCTGCGTATAGTCCGAGTCCTAGCTCATATAGTACTCAGAATCCAGGGTCAACGTCCGTTGTTTATGACGCCTATGAACCTAATCAGAGCTTCTCCAGTCCTGGATCTGCAGAAGTTACCTCTTATAACAATGGAATGACTTACTCAGAAGGAGCAGAAGCAGAATCAGAAACCTCAGCTGACTTTAAGGTTACTCAAGCTTTGCGCCGATTGGAGGTGCAGTTAAGTTTGAATGAGGACAACATTGAAGAAATTGCTCCCTTCTACAACGAGCATGAAGCTACCGGTGATTCCAAACCACCGAATCATCAAGGGATGATGTGCAAGCAAGAGGAATCCACAGCTCTCTCTGGACCAGATAACCAGGGGCTATTTTATGATGGATATAATGGAAGGCAAGGTGATAGTGGTGAAAGTTATCATGAATTACTAGACCATGATTTCCCTGATGGAAATGAAAAGGCTCTATCATGGAAAAATGTATACATGCCAGCAGGAAATGAGAGTTCACCATCTTCTTCATTAAGGGAACCAGTTACGAACCCGGAAAACTATTGCTGGACAAATTTCAACACTGATAATGCTGGAAACTCTGTTTTCTCACTACCTCAAGGTGTTGATGAAGTCACACTTCCTCCATATTCTTCTATGGATGAAACACAAGAAATTCGTTCTAGCTACTATTCGACATTGTTTGACCAAAGCCAAATTGGAGCATCTCATGATGCTGGTTCAAGCTTAACTGTTTCACAAAAACAGAAATTTACTATTAAGGCAGTCTCCCCAGAATGGGGTTATTCCTCTGAGACTACAAAGGTTTTCATTATTGGGTCTTTTCTCTGTCATCCCTCTGATTCTGCCTGGGCCTGTATGCTTGGTGATGTTGAAGTTCCTGTTGAGCTAATTCAGGATGGTGTAATGTGTTGTGAAGTTCCATCTCACATTCCTGGAAAGGTTACTCTGTGCATTACTTCTGGAAACCGGGAGTCATGCAGTGAAGTCAGAGAGTTTGAGTATCGTGATAAGACCAAGAATTTCACCGACCCTGCTCCATTGGAAAGAGAAGCCACCAGAACTCCAGATGAGCTGTTATTACTTGTTAGATTTGGGCAGATGCTGCTTTCTGAGTCATCTGTAAGTAATGATAACAACGAATCGGGAATTTTCATAAAACAGAAGGCTGATGATGATTCATGGAGCCATATTATAGAGGCTCTACTATTTGGCAGTGAAAATTCTTCTGGTACTATCAATTGGCTTCTTGAAGAGCTACTAAAGGATAAGCTACAGGCGTGGCTTACTTCCAGATCTCGGGAAGTAGATGAAGAGACGGGCTGTTCTTTGTCCAAGAAAGAGCAGGGGATTATTCACATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTCAGTTGCGGTGTGAATATAAATTTCCGTGATGTCAATGGGTGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCATCACTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCAATTGGTAAAACTGCGGCATCCATTGCAGCTAGCAGCGGGCATAAGGGACTGGCAGGGTATCTTTCTGAGGTAGCTCTAACAAGCCATCTGTCATCTCTTACACTGGAAGAGAATGAGCTATCTAAAAGTTCTGCGGAGCTTCAAGCAGATTTAACTGTTAGTAATGTCTCCAAGGAAAATATTGCTTTCAGTGAGGATCGGACCTCACTCAAAGATACCTTAGCTGCTGTCAGAAATACAACTCAGGCAGCTGCACGGATACAAGCTGCTTTTCGATCACATTCATTTAGAAAACGGAGAACAAAAGAAACAAATGCTGTTATGAGTGGACATGATATAAGTGCAAGTAGTGTTGGTGACATGCCAGAGCTTTATGCTATGTCAAGACTTGCCTTTCGAAACTCACGTGAACATAACTCAGCTGCATTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCCTATCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGAGGTTACCAAGTTAGGAAGCATTACAAAGTATTATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTAAGATGGCGGAGAAAAGGAGTCGGTTTACGGGGTTTCAAACCAGAGATGCAGGTTAACGAAAATGAAGATGAAGATATTCTCAAAGTGTTCCGAAAACAGAAAGTAGATGTGGAAATTGAAAAGGCTGTCTCAAGAGTGCTGTCCATGGTCAAATCTCCTGATGCTCGTGAGCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCCAAGGCCGAACTTGCACAAACAAGTGAAGAAAAATCGGTAACAACTTCTGTAGAAGATTTTTTAAACATGGATGATGATTTTTATTAA
Protein sequence

>Msa0577660

MTSGYEYDIDDLYQEAQRRWLKPAEVMYILQNHEKYQFTQEPPQQPTSGSLFLFNRRVLRFFRKDGHAWRKKRDGRAVGEAHERLKVGNVEAINCYYAHGEQNPTFQRRSYWMLNPEFDHIVLVHYRDTSEGRLSSGPGTQLSPGSSAYSPSPSSYSTQNPGSTSVVYDAYEPNQSFSSPGSAEVTSYNNGMTYSEGAEAESETSADFKVTQALRRLEVQLSLNEDNIEEIAPFYNEHEATGDSKPPNHQGMMCKQEESTALSGPDNQGLFYDGYNGRQGDSGESYHELLDHDFPDGNEKALSWKNVYMPAGNESSPSSSLREPVTNPENYCWTNFNTDNAGNSVFSLPQGVDEVTLPPYSSMDETQEIRSSYYSTLFDQSQIGASHDAGSSLTVSQKQKFTIKAVSPEWGYSSETTKVFIIGSFLCHPSDSAWACMLGDVEVPVELIQDGVMCCEVPSHIPGKVTLCITSGNRESCSEVREFEYRDKTKNFTDPAPLEREATRTPDELLLLVRFGQMLLSESSVSNDNNESGIFIKQKADDDSWSHIIEALLFGSENSSGTINWLLEELLKDKLQAWLTSRSREVDEETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDVNGWTALHWAARFGREKMVASLIASGASAGAVTDPSAQDPIGKTAASIAASSGHKGLAGYLSEVALTSHLSSLTLEENELSKSSAELQADLTVSNVSKENIAFSEDRTSLKDTLAAVRNTTQAAARIQAAFRSHSFRKRRTKETNAVMSGHDISASSVGDMPELYAMSRLAFRNSREHNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVLWAVGILDKVVLRWRRKGVGLRGFKPEMQVNENEDEDILKVFRKQKVDVEIEKAVSRVLSMVKSPDAREQYHRMLEKYRQAKAELAQTSEEKSVTTSVEDFLNMDDDFY*