Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592330 | XP_003604990.1 | 100.000 | 219 | 0 | 0 | 1 | 219 | 1 | 219 | 6.51e-162 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592330 | sp|Q9MAS5|VA726_ARATH | 80.365 | 219 | 43 | 0 | 1 | 219 | 1 | 219 | 2.21e-132 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592330 | G7JUL3 | 100.000 | 219 | 0 | 0 | 1 | 219 | 1 | 219 | 3.11e-162 | 456 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0592330 | -0.803402 | 3.545559e-49 | -8.615850e-47 |
| Msa0004480 | Msa0592330 | 0.801524 | 8.645650e-49 | -8.615850e-47 |
| Msa0017300 | Msa0592330 | -0.802942 | 4.414606e-49 | -8.615850e-47 |
| Msa0024400 | Msa0592330 | 0.817489 | 3.211701e-52 | -8.615850e-47 |
| Msa0029520 | Msa0592330 | -0.819448 | 1.155234e-52 | -8.615850e-47 |
| Msa0030700 | Msa0592330 | 0.805316 | 1.415670e-49 | -8.615850e-47 |
| Msa0032710 | Msa0592330 | 0.822051 | 2.913218e-53 | -8.615850e-47 |
| Msa0033840 | Msa0592330 | -0.862712 | 4.172484e-64 | -8.615850e-47 |
| Msa0043850 | Msa0592330 | 0.862396 | 5.219855e-64 | -8.615850e-47 |
| Msa0052360 | Msa0592330 | 0.834622 | 2.693859e-56 | -8.615850e-47 |
| Msa0052780 | Msa0592330 | 0.816906 | 4.343676e-52 | -8.615850e-47 |
| Msa0061220 | Msa0592330 | 0.851568 | 8.153362e-61 | -8.615850e-47 |
| Msa0076290 | Msa0592330 | 0.800847 | 1.189574e-48 | -8.615850e-47 |
| Msa0077370 | Msa0592330 | 0.825969 | 3.507712e-54 | -8.615850e-47 |
| Msa0078120 | Msa0592330 | 0.803921 | 2.767855e-49 | -8.615850e-47 |
| Msa0081610 | Msa0592330 | -0.849617 | 2.882751e-60 | -8.615850e-47 |
| Msa0082420 | Msa0592330 | 0.841111 | 5.791971e-58 | -8.615850e-47 |
| Msa0090510 | Msa0592330 | 0.866602 | 2.529487e-65 | -8.615850e-47 |
| Msa0091730 | Msa0592330 | 0.805886 | 1.074808e-49 | -8.615850e-47 |
| Msa0094710 | Msa0592330 | 0.831943 | 1.253097e-55 | -8.615850e-47 |
| Msa0097370 | Msa0592330 | 0.836407 | 9.526734e-57 | -8.615850e-47 |
| Msa0097570 | Msa0592330 | 0.826392 | 2.782632e-54 | -8.615850e-47 |
| Msa0108760 | Msa0592330 | 0.806962 | 6.375454e-50 | -8.615850e-47 |
| Msa0137980 | Msa0592330 | 0.855565 | 5.791701e-62 | -8.615850e-47 |
| Msa0138900 | Msa0592330 | 0.842441 | 2.581199e-58 | -8.615850e-47 |
| Msa0138990 | Msa0592330 | -0.806793 | 6.923426e-50 | -8.615850e-47 |
| Msa0139670 | Msa0592330 | 0.840765 | 7.140297e-58 | -8.615850e-47 |
| Msa0145430 | Msa0592330 | 0.819752 | 9.847301e-53 | -8.615850e-47 |
| Msa0152560 | Msa0592330 | 0.810805 | 9.602697e-51 | -8.615850e-47 |
| Msa0158890 | Msa0592330 | -0.800345 | 1.505603e-48 | -8.615850e-47 |
| Msa0160960 | Msa0592330 | 0.802620 | 5.146130e-49 | -8.615850e-47 |
| Msa0163510 | Msa0592330 | 0.821730 | 3.457077e-53 | -8.615850e-47 |
| Msa0170630 | Msa0592330 | 0.812406 | 4.307879e-51 | -8.615850e-47 |
| Msa0173950 | Msa0592330 | -0.849787 | 2.583175e-60 | -8.615850e-47 |
| Msa0183910 | Msa0592330 | 0.859574 | 3.765495e-63 | -8.615850e-47 |
| Msa0189530 | Msa0592330 | 0.860567 | 1.888329e-63 | -8.615850e-47 |
| Msa0194920 | Msa0592330 | 0.848139 | 7.412986e-60 | -8.615850e-47 |
| Msa0204960 | Msa0592330 | 0.806453 | 8.167730e-50 | -8.615850e-47 |
| Msa0213540 | Msa0592330 | 0.807232 | 5.589584e-50 | -8.615850e-47 |
| Msa0217670 | Msa0592330 | 0.810849 | 9.394522e-51 | -8.615850e-47 |
| Msa0217700 | Msa0592330 | 0.801355 | 9.363406e-49 | -8.615850e-47 |
| Msa0220400 | Msa0592330 | -0.844262 | 8.427850e-59 | -8.615850e-47 |
| Msa0221850 | Msa0592330 | -0.825655 | 4.163475e-54 | -8.615850e-47 |
| Msa0223200 | Msa0592330 | -0.804176 | 2.449296e-49 | -8.615850e-47 |
| Msa0224130 | Msa0592330 | 0.827290 | 1.697417e-54 | -8.615850e-47 |
| Msa0231800 | Msa0592330 | 0.865803 | 4.528811e-65 | -8.615850e-47 |
| Msa0233370 | Msa0592330 | 0.803793 | 2.942152e-49 | -8.615850e-47 |
| Msa0234090 | Msa0592330 | 0.822898 | 1.851476e-53 | -8.615850e-47 |
| Msa0234410 | Msa0592330 | -0.810156 | 1.325979e-50 | -8.615850e-47 |
| Msa0236920 | Msa0592330 | 0.853605 | 2.139911e-61 | -8.615850e-47 |
| Msa0237300 | Msa0592330 | 0.808703 | 2.719294e-50 | -8.615850e-47 |
| Msa0372300 | Msa0592330 | 0.826123 | 3.223798e-54 | -8.615850e-47 |
| Msa0380400 | Msa0592330 | -0.815139 | 1.077305e-51 | -8.615850e-47 |
| Msa0382370 | Msa0592330 | 0.842400 | 2.645765e-58 | -8.615850e-47 |
| Msa0385500 | Msa0592330 | 0.825523 | 4.474962e-54 | -8.615850e-47 |
| Msa0388730 | Msa0592330 | 0.836094 | 1.144339e-56 | -8.615850e-47 |
| Msa0389080 | Msa0592330 | -0.823254 | 1.529057e-53 | -8.615850e-47 |
| Msa0389210 | Msa0592330 | 0.808499 | 3.005515e-50 | -8.615850e-47 |
| Msa0403470 | Msa0592330 | -0.814164 | 1.770652e-51 | -8.615850e-47 |
| Msa0403770 | Msa0592330 | 0.803078 | 4.139342e-49 | -8.615850e-47 |
| Msa0405470 | Msa0592330 | -0.826884 | 2.122650e-54 | -8.615850e-47 |
| Msa0405550 | Msa0592330 | -0.810817 | 9.543625e-51 | -8.615850e-47 |
| Msa0420610 | Msa0592330 | 0.815244 | 1.021014e-51 | -8.615850e-47 |
| Msa0432160 | Msa0592330 | 0.836168 | 1.096318e-56 | -8.615850e-47 |
| Msa0449910 | Msa0592330 | -0.802004 | 6.891081e-49 | -8.615850e-47 |
| Msa0450400 | Msa0592330 | -0.805001 | 1.647562e-49 | -8.615850e-47 |
| Msa0476170 | Msa0592330 | -0.805478 | 1.309331e-49 | -8.615850e-47 |
| Msa0476680 | Msa0592330 | 0.841532 | 4.488192e-58 | -8.615850e-47 |
| Msa0240900 | Msa0592330 | 0.825880 | 3.683404e-54 | -8.615850e-47 |
| Msa0257490 | Msa0592330 | 0.840308 | 9.400129e-58 | -8.615850e-47 |
| Msa0265270 | Msa0592330 | 0.826140 | 3.194269e-54 | -8.615850e-47 |
| Msa0274720 | Msa0592330 | 0.821137 | 4.737716e-53 | -8.615850e-47 |
| Msa0278580 | Msa0592330 | 0.808690 | 2.735964e-50 | -8.615850e-47 |
| Msa0293720 | Msa0592330 | 0.822412 | 2.402290e-53 | -8.615850e-47 |
| Msa0296790 | Msa0592330 | 0.815039 | 1.133727e-51 | -8.615850e-47 |
| Msa0315520 | Msa0592330 | 0.815851 | 7.480891e-52 | -8.615850e-47 |
| Msa0317960 | Msa0592330 | 0.802386 | 5.749661e-49 | -8.615850e-47 |
| Msa0317970 | Msa0592330 | 0.838923 | 2.154756e-57 | -8.615850e-47 |
| Msa0332190 | Msa0592330 | 0.828719 | 7.690174e-55 | -8.615850e-47 |
| Msa0332200 | Msa0592330 | 0.803097 | 4.101208e-49 | -8.615850e-47 |
| Msa0483970 | Msa0592330 | -0.813424 | 2.578103e-51 | -8.615850e-47 |
| Msa0493180 | Msa0592330 | -0.807749 | 4.342433e-50 | -8.615850e-47 |
| Msa0500610 | Msa0592330 | -0.803002 | 4.291537e-49 | -8.615850e-47 |
| Msa0500700 | Msa0592330 | -0.803109 | 4.077513e-49 | -8.615850e-47 |
| Msa0512630 | Msa0592330 | 0.807388 | 5.179582e-50 | -8.615850e-47 |
| Msa0521010 | Msa0592330 | 0.842218 | 2.956482e-58 | -8.615850e-47 |
| Msa0527540 | Msa0592330 | 0.832897 | 7.270271e-56 | -8.615850e-47 |
| Msa0529000 | Msa0592330 | 0.823725 | 1.186571e-53 | -8.615850e-47 |
| Msa0532230 | Msa0592330 | 0.852550 | 4.289341e-61 | -8.615850e-47 |
| Msa0534870 | Msa0592330 | 0.803800 | 2.931764e-49 | -8.615850e-47 |
| Msa0536350 | Msa0592330 | 0.845167 | 4.808443e-59 | -8.615850e-47 |
| Msa0545020 | Msa0592330 | 0.822889 | 1.860536e-53 | -8.615850e-47 |
| Msa0545050 | Msa0592330 | 0.835955 | 1.241433e-56 | -8.615850e-47 |
| Msa0567370 | Msa0592330 | 0.822224 | 2.655853e-53 | -8.615850e-47 |
| Msa0569960 | Msa0592330 | 0.803233 | 3.843818e-49 | -8.615850e-47 |
| Msa0577490 | Msa0592330 | 0.803629 | 3.182536e-49 | -8.615850e-47 |
| Msa0577660 | Msa0592330 | 0.816847 | 4.478308e-52 | -8.615850e-47 |
| Msa0577750 | Msa0592330 | 0.811299 | 7.505028e-51 | -8.615850e-47 |
| Msa0583360 | Msa0592330 | -0.801155 | 1.028869e-48 | -8.615850e-47 |
| Msa0587120 | Msa0592330 | 0.810271 | 1.252226e-50 | -8.615850e-47 |
| Msa0592270 | Msa0592330 | 0.805082 | 1.584664e-49 | -8.615850e-47 |
| Msa0592330 | Msa0594050 | 0.829904 | 3.964263e-55 | -8.615850e-47 |
| Msa0592330 | Msa0600590 | 0.862812 | 3.885989e-64 | -8.615850e-47 |
| Msa0592330 | Msa0604290 | 0.812050 | 5.152863e-51 | -8.615850e-47 |
| Msa0592330 | Msa0611060 | 0.801565 | 8.480247e-49 | -8.615850e-47 |
| Msa0592330 | Msa0613110 | 0.811949 | 5.421070e-51 | -8.615850e-47 |
| Msa0592330 | Msa0613340 | 0.811896 | 5.567354e-51 | -8.615850e-47 |
| Msa0592330 | Msa0613420 | 0.826850 | 2.162821e-54 | -8.615850e-47 |
| Msa0592330 | Msa0617170 | 0.800930 | 1.143593e-48 | -8.615850e-47 |
| Msa0592330 | Msa0626920 | 0.810854 | 9.372639e-51 | -8.615850e-47 |
| Msa0592330 | Msa0629240 | 0.829172 | 5.972735e-55 | -8.615850e-47 |
| Msa0592330 | Msa0632420 | 0.899568 | 1.741649e-77 | -8.615850e-47 |
| Msa0592330 | Msa0637930 | -0.808584 | 2.882958e-50 | -8.615850e-47 |
| Msa0592330 | Msa0639520 | 0.806380 | 8.459645e-50 | -8.615850e-47 |
| Msa0592330 | Msa0641130 | 0.840962 | 6.337165e-58 | -8.615850e-47 |
| Msa0592330 | Msa0651560 | 0.827406 | 1.591899e-54 | -8.615850e-47 |
| Msa0592330 | Msa0653670 | 0.817604 | 3.025603e-52 | -8.615850e-47 |
| Msa0592330 | Msa0653880 | 0.805417 | 1.348250e-49 | -8.615850e-47 |
| Msa0592330 | Msa0667030 | 0.853518 | 2.266045e-61 | -8.615850e-47 |
| Msa0592330 | Msa0671170 | 0.828308 | 9.663682e-55 | -8.615850e-47 |
| Msa0592330 | Msa0671210 | 0.838834 | 2.271594e-57 | -8.615850e-47 |
| Msa0592330 | Msa0672550 | 0.803729 | 3.034240e-49 | -8.615850e-47 |
| Msa0592330 | Msa0679670 | 0.831163 | 1.950852e-55 | -8.615850e-47 |
| Msa0592330 | Msa0694140 | 0.812555 | 3.996371e-51 | -8.615850e-47 |
| Msa0592330 | Msa0697680 | 0.853540 | 2.233152e-61 | -8.615850e-47 |
| Msa0592330 | Msa0698460 | 0.805875 | 1.080693e-49 | -8.615850e-47 |
| Msa0592330 | Msa0702720 | 0.801749 | 7.773812e-49 | -8.615850e-47 |
| Msa0592330 | Msa0703800 | 0.828385 | 9.259199e-55 | -8.615850e-47 |
| Msa0592330 | Msa0703810 | 0.840958 | 6.353099e-58 | -8.615850e-47 |
| Msa0592330 | Msa0709120 | 0.841814 | 3.781996e-58 | -8.615850e-47 |
| Msa0592330 | Msa0712860 | 0.804574 | 2.023377e-49 | -8.615850e-47 |
| Msa0592330 | Msa0744640 | 0.872440 | 3.175883e-67 | -8.615850e-47 |
| Msa0592330 | Msa0760700 | 0.814154 | 1.780308e-51 | -8.615850e-47 |
| Msa0592330 | Msa0769720 | 0.800035 | 1.740440e-48 | -8.615850e-47 |
| Msa0592330 | Msa0787790 | 0.805876 | 1.080140e-49 | -8.615850e-47 |
| Msa0592330 | Msa0796580 | -0.859450 | 4.102557e-63 | -8.615850e-47 |
| Msa0592330 | Msa0798450 | 0.801960 | 7.035303e-49 | -8.615850e-47 |
| Msa0592330 | Msa0800480 | 0.809092 | 2.244732e-50 | -8.615850e-47 |
| Msa0592330 | Msa0802240 | 0.825114 | 5.591535e-54 | -8.615850e-47 |
| Msa0592330 | Msa0810440 | 0.814173 | 1.763216e-51 | -8.615850e-47 |
| Msa0592330 | Msa0822500 | 0.818077 | 2.366344e-52 | -8.615850e-47 |
| Msa0592330 | Msa0823370 | 0.816505 | 5.340971e-52 | -8.615850e-47 |
| Msa0592330 | Msa0823540 | 0.825922 | 3.598812e-54 | -8.615850e-47 |
| Msa0592330 | Msa0833270 | 0.803110 | 4.076489e-49 | -8.615850e-47 |
| Msa0592330 | Msa0833950 | -0.840786 | 7.048285e-58 | -8.615850e-47 |
| Msa0592330 | Msa0841730 | 0.872263 | 3.638787e-67 | -8.615850e-47 |
| Msa0592330 | Msa0855870 | 0.816590 | 5.112699e-52 | -8.615850e-47 |
| Msa0592330 | Msa0862620 | 0.825483 | 4.574427e-54 | -8.615850e-47 |
| Msa0592330 | Msa0863990 | 0.825302 | 5.047832e-54 | -8.615850e-47 |
| Msa0592330 | Msa0864820 | -0.802391 | 5.735885e-49 | -8.615850e-47 |
| Msa0592330 | Msa0867660 | -0.800476 | 1.415581e-48 | -8.615850e-47 |
| Msa0592330 | Msa0870460 | -0.818998 | 1.462638e-52 | -8.615850e-47 |
| Msa0592330 | Msa0870510 | 0.858436 | 8.247632e-63 | -8.615850e-47 |
| Msa0592330 | Msa0881530 | -0.816153 | 6.404854e-52 | -8.615850e-47 |
| Msa0592330 | Msa0921420 | 0.805937 | 1.048782e-49 | -8.615850e-47 |
| Msa0592330 | Msa0924900 | -0.803121 | 4.055479e-49 | -8.615850e-47 |
| Msa0592330 | Msa0924980 | -0.803519 | 3.354131e-49 | -8.615850e-47 |
| Msa0592330 | Msa0925030 | -0.815949 | 7.111475e-52 | -8.615850e-47 |
| Msa0592330 | Msa0931000 | -0.819781 | 9.698193e-53 | -8.615850e-47 |
| Msa0592330 | Msa0940910 | 0.818891 | 1.547249e-52 | -8.615850e-47 |
| Msa0592330 | Msa0944020 | 0.810404 | 1.172316e-50 | -8.615850e-47 |
| Msa0592330 | Msa0965290 | 0.802840 | 4.634938e-49 | -8.615850e-47 |
| Msa0592330 | Msa0969380 | 0.804735 | 1.872786e-49 | -8.615850e-47 |
| Msa0592330 | Msa0969720 | 0.805088 | 1.580445e-49 | -8.615850e-47 |
| Msa0592330 | Msa0982090 | -0.848786 | 4.907714e-60 | -8.615850e-47 |
| Msa0592330 | Msa0983600 | -0.800451 | 1.432470e-48 | -8.615850e-47 |
| Msa0592330 | Msa0983610 | -0.800184 | 1.623232e-48 | -8.615850e-47 |
| Msa0592330 | Msa0985180 | 0.808598 | 2.863314e-50 | -8.615850e-47 |
| Msa0592330 | Msa0992510 | 0.803161 | 3.978083e-49 | -8.615850e-47 |
| Msa0592330 | Msa0999680 | 0.801873 | 7.332950e-49 | -8.615850e-47 |
| Msa0592330 | Msa1011250 | 0.833776 | 4.391180e-56 | -8.615850e-47 |
| Msa0592330 | Msa1031460 | 0.801296 | 9.627892e-49 | -8.615850e-47 |
| Msa0592330 | Msa1062040 | 0.840988 | 6.239512e-58 | -8.615850e-47 |
| Msa0592330 | Msa1063360 | 0.812114 | 4.990230e-51 | -8.615850e-47 |
| Msa0592330 | Msa1070540 | 0.820021 | 8.548666e-53 | -8.615850e-47 |
| Msa0592330 | Msa1086490 | -0.824991 | 5.979193e-54 | -8.615850e-47 |
| Msa0592330 | Msa1089190 | 0.813013 | 3.173076e-51 | -8.615850e-47 |
| Msa0592330 | Msa1089450 | 0.835422 | 1.693956e-56 | -8.615850e-47 |
| Msa0592330 | Msa1089460 | 0.805175 | 1.515682e-49 | -8.615850e-47 |
| Msa0592330 | Msa1096070 | 0.823485 | 1.350155e-53 | -8.615850e-47 |
| Msa0592330 | Msa1101240 | 0.818779 | 1.640143e-52 | -8.615850e-47 |
| Msa0592330 | Msa1107200 | 0.822571 | 2.206266e-53 | -8.615850e-47 |
| Msa0592330 | Msa1128270 | 0.867708 | 1.121595e-65 | -8.615850e-47 |
| Msa0592330 | Msa1128280 | 0.839087 | 1.953641e-57 | -8.615850e-47 |
| Msa0592330 | Msa1150780 | 0.824875 | 6.368014e-54 | -8.615850e-47 |
| Msa0592330 | Msa1158390 | 0.816886 | 4.389097e-52 | -8.615850e-47 |
| Msa0592330 | Msa1159170 | 0.805579 | 1.247159e-49 | -8.615850e-47 |
| Msa0592330 | Msa1165270 | 0.826649 | 2.415574e-54 | -8.615850e-47 |
| Msa0592330 | Msa1173150 | 0.822816 | 1.934293e-53 | -8.615850e-47 |
| Msa0592330 | Msa1175200 | 0.807045 | 6.121535e-50 | -8.615850e-47 |
| Msa0592330 | Msa1183140 | 0.824276 | 8.812627e-54 | -8.615850e-47 |
| Msa0592330 | Msa1184690 | 0.815617 | 8.434655e-52 | -8.615850e-47 |
| Msa0592330 | Msa1188350 | 0.808830 | 2.553666e-50 | -8.615850e-47 |
| Msa0592330 | Msa1190100 | -0.837921 | 3.907882e-57 | -8.615850e-47 |
| Msa0592330 | Msa1206270 | 0.805675 | 1.190351e-49 | -8.615850e-47 |
| Msa0592330 | Msa1206450 | -0.808077 | 3.697585e-50 | -8.615850e-47 |
| Msa0592330 | Msa1207920 | -0.819077 | 1.403822e-52 | -8.615850e-47 |
| Msa0592330 | Msa1208110 | 0.816645 | 4.971303e-52 | -8.615850e-47 |
| Msa0592330 | Msa1208990 | 0.841340 | 5.042737e-58 | -8.615850e-47 |
| Msa0592330 | Msa1211230 | -0.830881 | 2.287156e-55 | -8.615850e-47 |
| Msa0592330 | Msa1211420 | -0.824423 | 8.135748e-54 | -8.615850e-47 |
| Msa0592330 | Msa1218160 | 0.828739 | 7.605100e-55 | -8.615850e-47 |
| Msa0592330 | Msa1221630 | 0.823684 | 1.213499e-53 | -8.615850e-47 |
| Msa0592330 | Msa1221960 | 0.813529 | 2.443833e-51 | -8.615850e-47 |
| Msa0592330 | Msa1225860 | -0.800376 | 1.483460e-48 | -8.615850e-47 |
| Msa0592330 | Msa1228040 | 0.833100 | 6.475204e-56 | -8.615850e-47 |
| Msa0592330 | Msa1229480 | 0.813151 | 2.959692e-51 | -8.615850e-47 |
| Msa0592330 | Msa1234620 | 0.834662 | 2.632819e-56 | -8.615850e-47 |
| Msa0592330 | Msa1236110 | -0.826322 | 2.891051e-54 | -8.615850e-47 |
| Msa0592330 | Msa1238600 | 0.848364 | 6.424184e-60 | -8.615850e-47 |
| Msa0592330 | Msa1256330 | 0.811476 | 6.869564e-51 | -8.615850e-47 |
| Msa0592330 | Msa1258030 | -0.822414 | 2.399973e-53 | -8.615850e-47 |
| Msa0592330 | Msa1260060 | 0.841297 | 5.176775e-58 | -8.615850e-47 |
| Msa0592330 | Msa1260220 | 0.803501 | 3.382598e-49 | -8.615850e-47 |
| Msa0592330 | Msa1265020 | 0.829203 | 5.869377e-55 | -8.615850e-47 |
| Msa0592330 | Msa1271130 | 0.808757 | 2.647520e-50 | -8.615850e-47 |
| Msa0592330 | Msa1273620 | -0.820893 | 5.391737e-53 | -8.615850e-47 |
| Msa0592330 | Msa1277410 | 0.800691 | 1.279745e-48 | -8.615850e-47 |
| Msa0592330 | Msa1277780 | 0.804731 | 1.876117e-49 | -8.615850e-47 |
| Msa0592330 | Msa1299400 | -0.833039 | 6.704242e-56 | -8.615850e-47 |
| Msa0592330 | Msa1307160 | 0.807640 | 4.580529e-50 | -8.615850e-47 |
| Msa0592330 | Msa1309760 | 0.824571 | 7.508202e-54 | -8.615850e-47 |
| Msa0592330 | Msa1309870 | 0.801671 | 8.066178e-49 | -8.615850e-47 |
| Msa0592330 | Msa1311600 | -0.804410 | 2.189724e-49 | -8.615850e-47 |
| Msa0592330 | Msa1316360 | 0.802410 | 5.684528e-49 | -8.615850e-47 |
| Msa0592330 | Msa1319560 | 0.803363 | 3.612416e-49 | -8.615850e-47 |
| Msa0592330 | Msa1325410 | -0.834000 | 3.860205e-56 | -8.615850e-47 |
| Msa0592330 | Msa1331050 | -0.846969 | 1.555340e-59 | -8.615850e-47 |
| Msa0592330 | Msa1337850 | 0.833051 | 6.659007e-56 | -8.615850e-47 |
| Msa0592330 | Msa1340200 | 0.816863 | 4.439853e-52 | -8.615850e-47 |
| Msa0592330 | Msa1342960 | -0.828897 | 6.963973e-55 | -8.615850e-47 |
| Msa0592330 | Msa1354790 | -0.800232 | 1.587115e-48 | -8.615850e-47 |
| Msa0592330 | Msa1354960 | -0.801307 | 9.579004e-49 | -8.615850e-47 |
| Msa0592330 | Msa1364080 | 0.818697 | 1.711912e-52 | -8.615850e-47 |
| Msa0592330 | Msa1364350 | -0.842864 | 1.992369e-58 | -8.615850e-47 |
| Msa0592330 | Msa1366390 | 0.815956 | 7.088354e-52 | -8.615850e-47 |
| Msa0592330 | Msa1369690 | 0.822780 | 1.972247e-53 | -8.615850e-47 |
| Msa0592330 | Msa1369920 | -0.818547 | 1.851851e-52 | -8.615850e-47 |
| Msa0592330 | Msa1370810 | 0.801495 | 8.766369e-49 | -8.615850e-47 |
| Msa0592330 | Msa1375610 | -0.808912 | 2.452387e-50 | -8.615850e-47 |
| Msa0592330 | Msa1376550 | -0.802926 | 4.449257e-49 | -8.615850e-47 |
| Msa0592330 | Msa1379020 | 0.815753 | 7.866172e-52 | -8.615850e-47 |
| Msa0592330 | Msa1382380 | -0.850260 | 1.904700e-60 | -8.615850e-47 |
| Msa0592330 | Msa1383630 | 0.830896 | 2.267724e-55 | -8.615850e-47 |
| Msa0592330 | Msa1385390 | -0.806219 | 9.149227e-50 | -8.615850e-47 |
| Msa0592330 | Msa1391140 | -0.800562 | 1.359617e-48 | -8.615850e-47 |
| Msa0592330 | Msa1407750 | 0.800696 | 1.276800e-48 | -8.615850e-47 |
| Msa0592330 | Msa1407760 | 0.845955 | 2.939770e-59 | -8.615850e-47 |
| Msa0592330 | Msa1407880 | 0.852777 | 3.695075e-61 | -8.615850e-47 |
| Msa0592330 | Msa1418970 | 0.827284 | 1.702858e-54 | -8.615850e-47 |
| Msa0592330 | Msa1419840 | 0.832327 | 1.006848e-55 | -8.615850e-47 |
| Msa0592330 | Msa1437730 | 0.813118 | 3.009286e-51 | -8.615850e-47 |
| Msa0592330 | Msa1442920 | 0.800596 | 1.338008e-48 | -8.615850e-47 |
| Msa0592330 | Msa1443200 | 0.812641 | 3.827079e-51 | -8.615850e-47 |
| Msa0592330 | Msa1443620 | 0.804104 | 2.535787e-49 | -8.615850e-47 |
| Msa0592330 | Msa1452710 | 0.809331 | 1.995073e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592330 | MtrunA17_Chr4g0010271 | 100.000 | 219 | 0 | 0 | 1 | 219 | 1 | 219 | 5.99e-166 | 456 |
| Msa0592330 | MtrunA17_Chr1g0169861 | 78.995 | 219 | 46 | 0 | 1 | 219 | 51 | 269 | 2.50e-138 | 388 |
| Msa0592330 | MtrunA17_Chr7g0237561 | 84.018 | 219 | 35 | 0 | 1 | 219 | 1 | 219 | 1.72e-129 | 363 |
| Msa0592330 | MtrunA17_Chr2g0296021 | 71.233 | 219 | 63 | 0 | 1 | 219 | 1 | 219 | 1.10e-122 | 346 |
| Msa0592330 | MtrunA17_Chr4g0043521 | 79.275 | 193 | 40 | 0 | 3 | 195 | 5 | 197 | 3.93e-121 | 342 |
| Msa0592330 | MtrunA17_Chr2g0291651 | 74.419 | 215 | 55 | 0 | 2 | 216 | 6 | 220 | 5.40e-115 | 327 |
| Msa0592330 | MtrunA17_Chr7g0237521 | 75.385 | 195 | 48 | 0 | 1 | 195 | 1 | 195 | 1.39e-111 | 318 |
| Msa0592330 | MtrunA17_Chr1g0210521 | 56.303 | 238 | 85 | 1 | 1 | 219 | 1 | 238 | 7.10e-102 | 294 |
| Msa0592330 | MtrunA17_Chr4g0010211 | 95.370 | 108 | 5 | 0 | 64 | 171 | 3 | 110 | 1.90e-71 | 213 |
| Msa0592330 | MtrunA17_Chr1g0169851 | 69.178 | 146 | 30 | 1 | 57 | 187 | 8 | 153 | 4.04e-70 | 211 |
| Msa0592330 | MtrunA17_Chr5g0441741 | 39.151 | 212 | 126 | 3 | 6 | 216 | 3 | 212 | 1.50e-49 | 160 |
| Msa0592330 | MtrunA17_Chr4g0026121 | 36.279 | 215 | 134 | 3 | 5 | 218 | 2 | 214 | 4.33e-46 | 152 |
| Msa0592330 | MtrunA17_Chr4g0064371 | 33.180 | 217 | 136 | 5 | 6 | 216 | 3 | 216 | 6.54e-41 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592330 | AT1G04760.2 | 80.365 | 219 | 43 | 0 | 1 | 219 | 1 | 219 | 2.25e-133 | 374 |
| Msa0592330 | AT1G04760.1 | 80.365 | 219 | 43 | 0 | 1 | 219 | 1 | 219 | 2.25e-133 | 374 |
| Msa0592330 | AT1G04750.1 | 83.105 | 219 | 37 | 0 | 1 | 219 | 1 | 219 | 3.29e-129 | 363 |
| Msa0592330 | AT2G32670.1 | 82.192 | 219 | 39 | 0 | 1 | 219 | 66 | 284 | 5.30e-129 | 365 |
| Msa0592330 | AT2G33120.1 | 83.105 | 219 | 37 | 0 | 1 | 219 | 1 | 219 | 1.24e-128 | 362 |
| Msa0592330 | AT2G33120.2 | 79.736 | 227 | 38 | 1 | 1 | 219 | 1 | 227 | 2.07e-125 | 354 |
| Msa0592330 | AT3G54300.3 | 56.723 | 238 | 84 | 2 | 1 | 219 | 1 | 238 | 8.02e-101 | 292 |
| Msa0592330 | AT3G54300.2 | 56.723 | 238 | 84 | 2 | 1 | 219 | 1 | 238 | 8.02e-101 | 292 |
| Msa0592330 | AT3G54300.1 | 56.723 | 238 | 84 | 2 | 1 | 219 | 1 | 238 | 8.02e-101 | 292 |
| Msa0592330 | AT2G33110.1 | 67.580 | 219 | 67 | 1 | 1 | 219 | 1 | 215 | 5.90e-97 | 281 |
| Msa0592330 | AT4G15780.1 | 70.391 | 179 | 52 | 1 | 1 | 178 | 1 | 179 | 2.49e-95 | 276 |
| Msa0592330 | AT2G33110.2 | 69.753 | 162 | 49 | 0 | 1 | 162 | 1 | 162 | 3.45e-85 | 251 |
| Msa0592330 | AT1G04750.2 | 84.397 | 141 | 22 | 0 | 79 | 219 | 1 | 141 | 3.06e-74 | 221 |
| Msa0592330 | AT1G04750.4 | 84.397 | 141 | 22 | 0 | 79 | 219 | 1 | 141 | 3.06e-74 | 221 |
| Msa0592330 | AT1G04750.3 | 84.397 | 141 | 22 | 0 | 79 | 219 | 1 | 141 | 3.06e-74 | 221 |
| Msa0592330 | AT5G11150.1 | 40.553 | 217 | 123 | 5 | 5 | 218 | 2 | 215 | 7.85e-53 | 169 |
| Msa0592330 | AT5G11150.2 | 40.553 | 217 | 123 | 5 | 5 | 218 | 2 | 215 | 1.45e-52 | 169 |
| Msa0592330 | AT5G22360.1 | 37.963 | 216 | 130 | 3 | 5 | 218 | 2 | 215 | 7.00e-51 | 164 |
| Msa0592330 | AT4G32150.1 | 38.498 | 213 | 128 | 3 | 5 | 216 | 2 | 212 | 2.37e-48 | 158 |
| Msa0592330 | AT2G25340.1 | 37.850 | 214 | 128 | 4 | 5 | 216 | 2 | 212 | 1.59e-43 | 145 |
| Msa0592330 | AT2G33120.3 | 88.372 | 86 | 10 | 0 | 134 | 219 | 52 | 137 | 3.87e-36 | 124 |
| Msa0592330 | AT3G24890.2 | 53.191 | 94 | 38 | 2 | 113 | 200 | 14 | 107 | 5.20e-25 | 95.5 |
| Msa0592330 | AT3G24890.1 | 53.125 | 64 | 26 | 1 | 113 | 176 | 14 | 73 | 2.18e-15 | 68.9 |
| Msa0592330 | AT3G24890.4 | 53.125 | 64 | 26 | 1 | 113 | 176 | 14 | 73 | 2.18e-15 | 68.9 |
| Msa0592330 | AT3G24890.3 | 53.125 | 64 | 26 | 1 | 113 | 176 | 14 | 73 | 2.18e-15 | 68.9 |
| Msa0592330 | AT3G24890.5 | 53.125 | 64 | 26 | 1 | 113 | 176 | 14 | 73 | 2.18e-15 | 68.9 |
Find 64 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTGTATTGTTTCATTTA+TGG | 0.081202 | 4_2:+17670523 | Msa0592330:three_prime_UTR |
| AAAAGTCTTAACAAAGAATT+TGG | 0.112791 | 4_2:+17668205 | Msa0592330:CDS |
| AAGCATGCTGAACATTATTT+TGG | 0.185674 | 4_2:+17670559 | Msa0592330:three_prime_UTR |
| AGAATTGTCACTACATATAT+TGG | 0.236659 | 4_2:+17670350 | Msa0592330:three_prime_UTR |
| TTGTGCAGGCACAAGATTTC+AGG | 0.249513 | 4_2:+17670180 | Msa0592330:intron |
| GGGAGAGAAGATTGAGGTTT+TGG | 0.250137 | 4_2:+17669525 | Msa0592330:CDS |
| ACCACATCTTTCTCCTCAAT+TGG | 0.292197 | 4_2:-17670214 | None:intergenic |
| TTCAGCTTCCTCGTCGATAA+TGG | 0.292725 | 4_2:+17667060 | Msa0592330:CDS |
| TGGAGTGACTGTTGGTGTTT+TGG | 0.295674 | 4_2:+17670596 | Msa0592330:three_prime_UTR |
| GTTAGGAAGGGAAGTGAATA+AGG | 0.317743 | 4_2:+17670453 | Msa0592330:three_prime_UTR |
| GTTATGTGCAGGTTATTGAT+AGG | 0.320869 | 4_2:+17669503 | Msa0592330:intron |
| TGCATCTGCTCCTTCAACTT+TGG | 0.346126 | 4_2:-17668314 | None:intergenic |
| AAGGAGTGAAAAGAGGAAAA+AGG | 0.346895 | 4_2:-17666724 | None:intergenic |
| TGTCAAATTTAGAGGCTAAA+AGG | 0.365585 | 4_2:-17666743 | None:intergenic |
| GCAAGTTTGCTAACTTCCTC+TGG | 0.381827 | 4_2:-17668353 | None:intergenic |
| ATACGTTCGAGAAAAGCTAT+TGG | 0.397330 | 4_2:-17668127 | None:intergenic |
| ATCATTGATCTATAGCTTTG+TGG | 0.397799 | 4_2:+17666909 | Msa0592330:CDS |
| AACTCCCTGCTTCTAACAAC+AGG | 0.399581 | 4_2:+17667010 | Msa0592330:CDS |
| TTTGTTTATTAGACATTCAA+TGG | 0.402021 | 4_2:+17670415 | Msa0592330:three_prime_UTR |
| AACTGAGAACCTTCGCTCTC+AGG | 0.426253 | 4_2:+17669555 | Msa0592330:CDS |
| CCACATCTTTCTCCTCAATT+GGG | 0.430467 | 4_2:-17670213 | None:intergenic |
| AGAGGTGGTGTCAAATTTAG+AGG | 0.431446 | 4_2:-17666751 | None:intergenic |
| GGCACAAGATTTCAGGCAGC+AGG | 0.435566 | 4_2:+17670187 | Msa0592330:intron |
| TTGTGAATTGTGATCATTCA+TGG | 0.455075 | 4_2:+17666879 | Msa0592330:exon |
| GTAAACCTGTTGTTAGAAGC+AGG | 0.458806 | 4_2:-17667015 | None:intergenic |
| TGAAGTCAAAGGAGTTATGA+TGG | 0.459537 | 4_2:+17668397 | Msa0592330:CDS |
| TTATGTGCAGGTTATTGATA+GGG | 0.472672 | 4_2:+17669504 | Msa0592330:intron |
| ATTGTTCTTTCTGTGTGCCA+TGG | 0.487473 | 4_2:+17670296 | Msa0592330:CDS |
| ATCTATAGCTTTGTGGCTCG+TGG | 0.490761 | 4_2:+17666916 | Msa0592330:CDS |
| TAGCTTTGTGGCTCGTGGTA+CGG | 0.495371 | 4_2:+17666921 | Msa0592330:CDS |
| ATGCTTTAGACCAAAGTTGA+AGG | 0.496438 | 4_2:+17668304 | Msa0592330:intron |
| AAAGTCTTAACAAAGAATTT+GGG | 0.498770 | 4_2:+17668206 | Msa0592330:CDS |
| AAAATGATGAAGAAATGAAA+AGG | 0.501975 | 4_2:-17666790 | None:intergenic |
| TGATAGGGGAGAGAAGATTG+AGG | 0.506422 | 4_2:+17669519 | Msa0592330:CDS |
| GGAGAAAGAGATAGAGAGAG+AGG | 0.517405 | 4_2:-17666769 | None:intergenic |
| AGGCTAAAAGGAGTGAAAAG+AGG | 0.522755 | 4_2:-17666731 | None:intergenic |
| GGAAGTGAATAAGGTGTGGT+AGG | 0.525716 | 4_2:+17670462 | Msa0592330:three_prime_UTR |
| AGGTTTACTTACAACTGTGA+TGG | 0.540715 | 4_2:+17667030 | Msa0592330:CDS |
| TTTAATAAAAGATATGGTGG+AGG | 0.542291 | 4_2:+17668160 | Msa0592330:CDS |
| AACAATACAGTTTATAAAGT+AGG | 0.548560 | 4_2:-17670513 | None:intergenic |
| TATGTGCAGGTTATTGATAG+GGG | 0.549992 | 4_2:+17669505 | Msa0592330:intron |
| TTGAAGACACTGTAAAGCAA+TGG | 0.558595 | 4_2:-17666986 | None:intergenic |
| GTTGTAGCAGTGGAGTCTGT+TGG | 0.563744 | 4_2:+17668094 | Msa0592330:CDS |
| GGCAGCAGGGAACCCAATTG+AGG | 0.564168 | 4_2:+17670201 | Msa0592330:CDS |
| GCGGAGTACAGTGACTTCAC+AGG | 0.572690 | 4_2:+17666952 | Msa0592330:CDS |
| TAAGTTAACAACTGAAGCCA+TGG | 0.574043 | 4_2:-17670313 | None:intergenic |
| TAAACCTGTTGTTAGAAGCA+GGG | 0.578456 | 4_2:-17667014 | None:intergenic |
| GCTCAAGTTTCTGAAGTCAA+AGG | 0.586109 | 4_2:+17668386 | Msa0592330:CDS |
| AGCTTACTGTGTTGTAGCAG+TGG | 0.596996 | 4_2:+17668084 | Msa0592330:intron |
| TGTGAATTGTGATCATTCAT+GGG | 0.599877 | 4_2:+17666880 | Msa0592330:exon |
| TCGTGGTACGGTGATTCTTG+CGG | 0.609688 | 4_2:+17666933 | Msa0592330:CDS |
| GAAAGAGATAGAGAGAGAGG+TGG | 0.617900 | 4_2:-17666766 | None:intergenic |
| GAAGGGAAGTGAATAAGGTG+TGG | 0.619277 | 4_2:+17670458 | Msa0592330:three_prime_UTR |
| GCACAAGATTTCAGGCAGCA+GGG | 0.625497 | 4_2:+17670188 | Msa0592330:CDS |
| ATAATGCATGGAGTGACTGT+TGG | 0.643651 | 4_2:+17670588 | Msa0592330:three_prime_UTR |
| ACAGATACTCAAAAGAAGAG+AGG | 0.645995 | 4_2:-17666847 | None:intergenic |
| ATTATCGACGAGGAAGCTGA+AGG | 0.649726 | 4_2:-17667058 | None:intergenic |
| CCCAATTGAGGAGAAAGATG+TGG | 0.650037 | 4_2:+17670213 | Msa0592330:CDS |
| AAGGTCGAACCTGAGAGCGA+AGG | 0.664624 | 4_2:-17669564 | None:intergenic |
| ATATTGTGTGGAACATCCAG+AGG | 0.668552 | 4_2:+17668337 | Msa0592330:CDS |
| GGAGCAGATGCAATATTGTG+TGG | 0.680494 | 4_2:+17668325 | Msa0592330:CDS |
| AAGACACTGTAAAGCAATGG+TGG | 0.700756 | 4_2:-17666983 | None:intergenic |
| TACTGAATCCATTATCGACG+AGG | 0.708046 | 4_2:-17667068 | None:intergenic |
| TATGATGGAAAATATCGACA+AGG | 0.735916 | 4_2:+17668412 | Msa0592330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATATGTAAATTGAAAT+AGG | + | chr4_2:17669634-17669653 | Msa0592330:intron | 10.0% |
| !!! | TTATCTGTTATTTATATTTT+TGG | + | chr4_2:17670060-17670079 | Msa0592330:intron | 10.0% |
| !!! | TTTTATTTTTGGAAAAGAAA+TGG | - | chr4_2:17666816-17666835 | None:intergenic | 15.0% |
| !! | TTGAACAAAAAATTATTCAA+GGG | - | chr4_2:17667146-17667165 | None:intergenic | 15.0% |
| !!! | AGAAAAAAATCTCATATTTT+TGG | - | chr4_2:17667333-17667352 | None:intergenic | 15.0% |
| !! | ATTGAAAAAAACAAAATGTA+AGG | - | chr4_2:17667806-17667825 | None:intergenic | 15.0% |
| !!! | TCATAAATTTTAAGATAAGA+GGG | - | chr4_2:17667962-17667981 | None:intergenic | 15.0% |
| !!! | ATCATAAATTTTAAGATAAG+AGG | - | chr4_2:17667963-17667982 | None:intergenic | 15.0% |
| !!! | TTCATCTACATATATTTTTT+TGG | + | chr4_2:17667992-17668011 | Msa0592330:intron | 15.0% |
| !!! | GATGATTTTAATAAAAGATA+TGG | + | chr4_2:17668154-17668173 | Msa0592330:CDS | 15.0% |
| !! | AAATTTCATATAGTCATAAA+TGG | - | chr4_2:17669181-17669200 | None:intergenic | 15.0% |
| !! | AAAACGAACAATAAAATTAA+AGG | - | chr4_2:17669586-17669605 | None:intergenic | 15.0% |
| !! | ATTTACATATATAAAACTGT+TGG | - | chr4_2:17669628-17669647 | None:intergenic | 15.0% |
| !!! | ATGTATATAATATTTAGTTC+TGG | + | chr4_2:17669697-17669716 | Msa0592330:intron | 15.0% |
| !! | CATACAATATTCATAATTAA+TGG | - | chr4_2:17670117-17670136 | None:intergenic | 15.0% |
| !! | TTAATTATGAATATTGTATG+AGG | + | chr4_2:17670117-17670136 | Msa0592330:intron | 15.0% |
| !! | AAAATGATGAAGAAATGAAA+AGG | - | chr4_2:17666793-17666812 | None:intergenic | 20.0% |
| !! | GTTGAACAAAAAATTATTCA+AGG | - | chr4_2:17667147-17667166 | None:intergenic | 20.0% |
| !! | TTTAATAATATCGACATTGT+CGG | - | chr4_2:17667169-17667188 | None:intergenic | 20.0% |
| !!! | TTAAACTGAACATTTTTACT+AGG | + | chr4_2:17667184-17667203 | Msa0592330:intron | 20.0% |
| !!! | TAAACTGAACATTTTTACTA+GGG | + | chr4_2:17667185-17667204 | Msa0592330:intron | 20.0% |
| !! | AAATCTAACATAATTAACGT+AGG | + | chr4_2:17667304-17667323 | Msa0592330:intron | 20.0% |
| !!! | TAATCTGATTTTATGAATTG+AGG | - | chr4_2:17667735-17667754 | None:intergenic | 20.0% |
| !! | AACAAGTTCAACAAAAAAAA+AGG | - | chr4_2:17668043-17668062 | None:intergenic | 20.0% |
| !!! | GATTTTAATAAAAGATATGG+TGG | + | chr4_2:17668157-17668176 | Msa0592330:CDS | 20.0% |
| !! | AAAAGTCTTAACAAAGAATT+TGG | + | chr4_2:17668205-17668224 | Msa0592330:CDS | 20.0% |
| !! | AAAGTCTTAACAAAGAATTT+GGG | + | chr4_2:17668206-17668225 | Msa0592330:CDS | 20.0% |
| !! | ATAACATGTAAATACCAATT+CGG | - | chr4_2:17668535-17668554 | None:intergenic | 20.0% |
| !!! | TAGATTTTAAGATTTATGTC+GGG | - | chr4_2:17668581-17668600 | None:intergenic | 20.0% |
| !!! | CTAGATTTTAAGATTTATGT+CGG | - | chr4_2:17668582-17668601 | None:intergenic | 20.0% |
| !! | CAAAGAAATCATCAATTATA+TGG | - | chr4_2:17668918-17668937 | None:intergenic | 20.0% |
| !!! | TTTGCTTTAACTATTTTGTT+AGG | + | chr4_2:17668954-17668973 | Msa0592330:intron | 20.0% |
| !! | TATGATTACTAAAGAATATC+TGG | + | chr4_2:17669116-17669135 | Msa0592330:intron | 20.0% |
| !!! | TATTTTTGTAGAATCGATAT+AGG | - | chr4_2:17669285-17669304 | None:intergenic | 20.0% |
| !! | GAATTTCATTTAATATCATG+TGG | + | chr4_2:17669457-17669476 | Msa0592330:intron | 20.0% |
| !! | TTATTATATATGTTATGTGC+AGG | + | chr4_2:17669492-17669511 | Msa0592330:intron | 20.0% |
| !!! | ATCCAAAACTTTAAAACATT+GGG | - | chr4_2:17669825-17669844 | None:intergenic | 20.0% |
| !!! | TTTTATGAAACTGGAATTAT+TGG | - | chr4_2:17670008-17670027 | None:intergenic | 20.0% |
| !! | TTTGTTTATTAGACATTCAA+TGG | + | chr4_2:17670415-17670434 | Msa0592330:three_prime_UTR | 20.0% |
| !! | AACAATACAGTTTATAAAGT+AGG | - | chr4_2:17670516-17670535 | None:intergenic | 20.0% |
| !! | AAACTGTATTGTTTCATTTA+TGG | + | chr4_2:17670523-17670542 | Msa0592330:three_prime_UTR | 20.0% |
| ! | TTTAGACAAAACCAAAAACA+AGG | + | chr4_2:17667255-17667274 | Msa0592330:intron | 25.0% |
| !!! | TTTTAATTGTGATGATGAAG+TGG | + | chr4_2:17667387-17667406 | Msa0592330:intron | 25.0% |
| !!! | TGTATTTTGAGCAATGTATA+AGG | + | chr4_2:17667451-17667470 | Msa0592330:intron | 25.0% |
| ! | ATAAGCAATTTAAGCAAGTA+AGG | - | chr4_2:17667917-17667936 | None:intergenic | 25.0% |
| ! | TTACTTGCTTAAATTGCTTA+TGG | + | chr4_2:17667916-17667935 | Msa0592330:intron | 25.0% |
| !! | TGAACTTGTTTAATGATTAG+TGG | + | chr4_2:17668053-17668072 | Msa0592330:intron | 25.0% |
| ! | TTTAATAAAAGATATGGTGG+AGG | + | chr4_2:17668160-17668179 | Msa0592330:CDS | 25.0% |
| ! | CATAGCAGTATAAAAAAAAC+AGG | + | chr4_2:17668639-17668658 | Msa0592330:intron | 25.0% |
| !!! | ATTGACTCGTATCATAAAAA+TGG | - | chr4_2:17668745-17668764 | None:intergenic | 25.0% |
| !!! | ATACGAGTCAATTTTTAACT+TGG | + | chr4_2:17668753-17668772 | Msa0592330:intron | 25.0% |
| ! | AATCGAGACAAAATACTTAA+AGG | - | chr4_2:17669084-17669103 | None:intergenic | 25.0% |
| !! | CATATATAAAACTGTTGGTT+TGG | - | chr4_2:17669623-17669642 | None:intergenic | 25.0% |
| ! | ATTGAAATAGGAGAAGATTA+TGG | + | chr4_2:17669646-17669665 | Msa0592330:intron | 25.0% |
| !!! | ATCCCAATGTTTTAAAGTTT+TGG | + | chr4_2:17669820-17669839 | Msa0592330:intron | 25.0% |
| !!! | CATCCAAAACTTTAAAACAT+TGG | - | chr4_2:17669826-17669845 | None:intergenic | 25.0% |
| !!! | CAATGTTTTAAAGTTTTGGA+TGG | + | chr4_2:17669824-17669843 | Msa0592330:intron | 25.0% |
| !! | GTATCATGATTTTATGAAAC+TGG | - | chr4_2:17670017-17670036 | None:intergenic | 25.0% |
| ! | TATTGGAATGTCAATTGAAA+TGG | + | chr4_2:17670149-17670168 | Msa0592330:intron | 25.0% |
| ! | AGAATTGTCACTACATATAT+TGG | + | chr4_2:17670350-17670369 | Msa0592330:three_prime_UTR | 25.0% |
| ! | TCATGTAAAAAAAGTTAGGA+AGG | + | chr4_2:17670440-17670459 | Msa0592330:three_prime_UTR | 25.0% |
| ! | CATGTAAAAAAAGTTAGGAA+GGG | + | chr4_2:17670441-17670460 | Msa0592330:three_prime_UTR | 25.0% |
| !! | TTGTTTGAGTTAAAAACACT+TGG | - | chr4_2:17670624-17670643 | None:intergenic | 25.0% |
| TGTCAAATTTAGAGGCTAAA+AGG | - | chr4_2:17666746-17666765 | None:intergenic | 30.0% | |
| TTGTGAATTGTGATCATTCA+TGG | + | chr4_2:17666879-17666898 | Msa0592330:exon | 30.0% | |
| TGTGAATTGTGATCATTCAT+GGG | + | chr4_2:17666880-17666899 | Msa0592330:exon | 30.0% | |
| ! | ATCATTGATCTATAGCTTTG+TGG | + | chr4_2:17666909-17666928 | Msa0592330:CDS | 30.0% |
| ! | ATTATCCAATGATGATGCTT+TGG | + | chr4_2:17667641-17667660 | Msa0592330:intron | 30.0% |
| TATTAGTGAGCTTCAACATA+TGG | - | chr4_2:17667840-17667859 | None:intergenic | 30.0% | |
| ! | TATGATGGAAAATATCGACA+AGG | + | chr4_2:17668412-17668431 | Msa0592330:CDS | 30.0% |
| !!! | AAATGTAGGTGCTATTTTGT+TGG | - | chr4_2:17668500-17668519 | None:intergenic | 30.0% |
| ! | GGTTCTTCAATCTAAAATGT+AGG | - | chr4_2:17668514-17668533 | None:intergenic | 30.0% |
| TTTAGATTGAAGAACCGAAT+TGG | + | chr4_2:17668518-17668537 | Msa0592330:intron | 30.0% | |
| ACTTGGTTTATCAATTGACT+TGG | + | chr4_2:17668770-17668789 | Msa0592330:intron | 30.0% | |
| TATTTATAGAACCAGATCAC+GGG | - | chr4_2:17668802-17668821 | None:intergenic | 30.0% | |
| GTATTTATAGAACCAGATCA+CGG | - | chr4_2:17668803-17668822 | None:intergenic | 30.0% | |
| ! | TCTTTTGCCTTGAAACTTAA+TGG | + | chr4_2:17668984-17669003 | Msa0592330:intron | 30.0% |
| CTTTATGCCATTAAGTTTCA+AGG | - | chr4_2:17668994-17669013 | None:intergenic | 30.0% | |
| TAAGTGACTATTAACTGTCA+AGG | - | chr4_2:17669024-17669043 | None:intergenic | 30.0% | |
| TTATGTGCAGGTTATTGATA+GGG | + | chr4_2:17669504-17669523 | Msa0592330:intron | 30.0% | |
| TTATGGACAGAGTTTGTATT+TGG | + | chr4_2:17669663-17669682 | Msa0592330:intron | 30.0% | |
| !!! | TAAAGTTTTGGATGGAGTTA+TGG | + | chr4_2:17669832-17669851 | Msa0592330:intron | 30.0% |
| AATCACAGCAAAATAAGCTA+AGG | - | chr4_2:17669880-17669899 | None:intergenic | 30.0% | |
| AATCACAGCAAAATAAGCTA+AGG | - | chr4_2:17669880-17669899 | None:intergenic | 30.0% | |
| TCATGATACTCTAGCATTAA+TGG | + | chr4_2:17670028-17670047 | Msa0592330:intron | 30.0% | |
| CATGATACTCTAGCATTAAT+GGG | + | chr4_2:17670029-17670048 | Msa0592330:intron | 30.0% | |
| GTATGAGGATTGTGAATTAT+TGG | + | chr4_2:17670132-17670151 | Msa0592330:intron | 30.0% | |
| GAATGTCAATTGAAATGGTA+TGG | + | chr4_2:17670154-17670173 | Msa0592330:intron | 30.0% | |
| GGCTTCATGTAAAAAAAGTT+AGG | + | chr4_2:17670436-17670455 | Msa0592330:three_prime_UTR | 30.0% | |
| ! | AAGCATGCTGAACATTATTT+TGG | + | chr4_2:17670559-17670578 | Msa0592330:three_prime_UTR | 30.0% |
| AAGGAGTGAAAAGAGGAAAA+AGG | - | chr4_2:17666727-17666746 | None:intergenic | 35.0% | |
| ACAGATACTCAAAAGAAGAG+AGG | - | chr4_2:17666850-17666869 | None:intergenic | 35.0% | |
| TTGAAGACACTGTAAAGCAA+TGG | - | chr4_2:17666989-17667008 | None:intergenic | 35.0% | |
| TAAACCTGTTGTTAGAAGCA+GGG | - | chr4_2:17667017-17667036 | None:intergenic | 35.0% | |
| AGGTTTACTTACAACTGTGA+TGG | + | chr4_2:17667030-17667049 | Msa0592330:CDS | 35.0% | |
| ! | TTTTACTAGGGTTCGAACTT+AGG | + | chr4_2:17667197-17667216 | Msa0592330:intron | 35.0% |
| !!! | GCACTTATGTACCTTGTTTT+TGG | - | chr4_2:17667269-17667288 | None:intergenic | 35.0% |
| CATCCAATAATAGAAGTGGA+CGG | - | chr4_2:17667414-17667433 | None:intergenic | 35.0% | |
| TGAGCAATGTATAAGGTCAA+TGG | + | chr4_2:17667458-17667477 | Msa0592330:intron | 35.0% | |
| TAGGTGGAACAATAACTAGT+TGG | + | chr4_2:17667496-17667515 | Msa0592330:intron | 35.0% | |
| ! | AATCTCCAAAGCATCATCAT+TGG | - | chr4_2:17667649-17667668 | None:intergenic | 35.0% |
| ATACGTTCGAGAAAAGCTAT+TGG | - | chr4_2:17668130-17668149 | None:intergenic | 35.0% | |
| ! | AGCTTTTCTCGAACGTATTA+AGG | + | chr4_2:17668132-17668151 | Msa0592330:CDS | 35.0% |
| ! | ATGCTTTAGACCAAAGTTGA+AGG | + | chr4_2:17668304-17668323 | Msa0592330:intron | 35.0% |
| TGAAGTCAAAGGAGTTATGA+TGG | + | chr4_2:17668397-17668416 | Msa0592330:CDS | 35.0% | |
| GAAAATCCAACCAAAATCGT+AGG | + | chr4_2:17668702-17668721 | Msa0592330:intron | 35.0% | |
| !! | CAAAATCCTACGATTTTGGT+TGG | - | chr4_2:17668711-17668730 | None:intergenic | 35.0% |
| ! | CCTTCAAAATCCTACGATTT+TGG | - | chr4_2:17668715-17668734 | None:intergenic | 35.0% |
| ! | CCAAAATCGTAGGATTTTGA+AGG | + | chr4_2:17668712-17668731 | Msa0592330:intron | 35.0% |
| CTAAAGAATATCTGGCATCT+AGG | + | chr4_2:17669124-17669143 | Msa0592330:intron | 35.0% | |
| ! | ATCTAGGCTTGAGTATTTTG+TGG | + | chr4_2:17669140-17669159 | Msa0592330:intron | 35.0% |
| ! | GACAGTAGGTTTTCAAAATC+GGG | - | chr4_2:17669386-17669405 | None:intergenic | 35.0% |
| ! | GGACAGTAGGTTTTCAAAAT+CGG | - | chr4_2:17669387-17669406 | None:intergenic | 35.0% |
| !! | GATTTTGAAAACCTACTGTC+CGG | + | chr4_2:17669386-17669405 | Msa0592330:intron | 35.0% |
| GTTATGTGCAGGTTATTGAT+AGG | + | chr4_2:17669503-17669522 | Msa0592330:intron | 35.0% | |
| TATGTGCAGGTTATTGATAG+GGG | + | chr4_2:17669505-17669524 | Msa0592330:intron | 35.0% | |
| GAAACTGGAATTATTGGACT+TGG | - | chr4_2:17670002-17670021 | None:intergenic | 35.0% | |
| ! | ATACTCTAGCATTAATGGGT+TGG | + | chr4_2:17670033-17670052 | Msa0592330:intron | 35.0% |
| TAAGTTAACAACTGAAGCCA+TGG | - | chr4_2:17670316-17670335 | None:intergenic | 35.0% | |
| ! | TTTTGGCACTGTATAATGCA+TGG | + | chr4_2:17670576-17670595 | Msa0592330:three_prime_UTR | 35.0% |
| AGGCTAAAAGGAGTGAAAAG+AGG | - | chr4_2:17666734-17666753 | None:intergenic | 40.0% | |
| ! | AGAGGTGGTGTCAAATTTAG+AGG | - | chr4_2:17666754-17666773 | None:intergenic | 40.0% |
| AAGACACTGTAAAGCAATGG+TGG | - | chr4_2:17666986-17667005 | None:intergenic | 40.0% | |
| GTAAACCTGTTGTTAGAAGC+AGG | - | chr4_2:17667018-17667037 | None:intergenic | 40.0% | |
| TACTGAATCCATTATCGACG+AGG | - | chr4_2:17667071-17667090 | None:intergenic | 40.0% | |
| CGTCCACTTCTATTATTGGA+TGG | + | chr4_2:17667412-17667431 | Msa0592330:intron | 40.0% | |
| CCACCATCCAATAATAGAAG+TGG | - | chr4_2:17667418-17667437 | None:intergenic | 40.0% | |
| CCACTTCTATTATTGGATGG+TGG | + | chr4_2:17667415-17667434 | Msa0592330:intron | 40.0% | |
| TAAGGTCAATGGTCCAAACT+TGG | + | chr4_2:17667469-17667488 | Msa0592330:intron | 40.0% | |
| ATGGTCCAAACTTGGCTAAT+AGG | + | chr4_2:17667477-17667496 | Msa0592330:intron | 40.0% | |
| TTCCACCTATTAGCCAAGTT+TGG | - | chr4_2:17667485-17667504 | None:intergenic | 40.0% | |
| ATATTGTGTGGAACATCCAG+AGG | + | chr4_2:17668337-17668356 | Msa0592330:CDS | 40.0% | |
| !! | GCTCAAGTTTCTGAAGTCAA+AGG | + | chr4_2:17668386-17668405 | Msa0592330:CDS | 40.0% |
| TCTGCACAAGAGATTGATGA+AGG | + | chr4_2:17668864-17668883 | Msa0592330:intron | 40.0% | |
| TGAAGGCGAACATGTTGATA+TGG | + | chr4_2:17668881-17668900 | Msa0592330:intron | 40.0% | |
| ! | CAAAATCGGGATTTAGCTTC+AGG | - | chr4_2:17669373-17669392 | None:intergenic | 40.0% |
| ! | GCAAAGCACCTAAACATACA+CGG | - | chr4_2:17669415-17669434 | None:intergenic | 40.0% |
| !! | AGAGAAGATTGAGGTTTTGG+TGG | + | chr4_2:17669528-17669547 | Msa0592330:CDS | 40.0% |
| ACTCACACTTGAACCTAACA+AGG | - | chr4_2:17669742-17669761 | None:intergenic | 40.0% | |
| GTTATGGTGTCCAAATCTCT+TGG | + | chr4_2:17669848-17669867 | Msa0592330:intron | 40.0% | |
| ! | AAGGCATCAACCAAGAGATT+TGG | - | chr4_2:17669861-17669880 | None:intergenic | 40.0% |
| CCACATCTTTCTCCTCAATT+GGG | - | chr4_2:17670216-17670235 | None:intergenic | 40.0% | |
| ACCACATCTTTCTCCTCAAT+TGG | - | chr4_2:17670217-17670236 | None:intergenic | 40.0% | |
| ATTGTTCTTTCTGTGTGCCA+TGG | + | chr4_2:17670296-17670315 | Msa0592330:CDS | 40.0% | |
| GTTAGGAAGGGAAGTGAATA+AGG | + | chr4_2:17670453-17670472 | Msa0592330:three_prime_UTR | 40.0% | |
| ATAATGCATGGAGTGACTGT+TGG | + | chr4_2:17670588-17670607 | Msa0592330:three_prime_UTR | 40.0% | |
| GAAAGAGATAGAGAGAGAGG+TGG | - | chr4_2:17666769-17666788 | None:intergenic | 45.0% | |
| GGAGAAAGAGATAGAGAGAG+AGG | - | chr4_2:17666772-17666791 | None:intergenic | 45.0% | |
| !! | ATCTATAGCTTTGTGGCTCG+TGG | + | chr4_2:17666916-17666935 | Msa0592330:CDS | 45.0% |
| AACTCCCTGCTTCTAACAAC+AGG | + | chr4_2:17667010-17667029 | Msa0592330:CDS | 45.0% | |
| ATTATCGACGAGGAAGCTGA+AGG | - | chr4_2:17667061-17667080 | None:intergenic | 45.0% | |
| TTCAGCTTCCTCGTCGATAA+TGG | + | chr4_2:17667060-17667079 | Msa0592330:CDS | 45.0% | |
| GGACCGTCCACTTCTATTAT+TGG | + | chr4_2:17667408-17667427 | Msa0592330:intron | 45.0% | |
| GTCCAAACTTGGCTAATAGG+TGG | + | chr4_2:17667480-17667499 | Msa0592330:intron | 45.0% | |
| AGCTTACTGTGTTGTAGCAG+TGG | + | chr4_2:17668084-17668103 | Msa0592330:intron | 45.0% | |
| TGCATCTGCTCCTTCAACTT+TGG | - | chr4_2:17668317-17668336 | None:intergenic | 45.0% | |
| GGAGCAGATGCAATATTGTG+TGG | + | chr4_2:17668325-17668344 | Msa0592330:CDS | 45.0% | |
| !! | GCAAGTTTGCTAACTTCCTC+TGG | - | chr4_2:17668356-17668375 | None:intergenic | 45.0% |
| AGGCGAACATGTTGATATGG+TGG | + | chr4_2:17668884-17668903 | Msa0592330:intron | 45.0% | |
| ! | ATCGGGATTTAGCTTCAGGT+CGG | - | chr4_2:17669369-17669388 | None:intergenic | 45.0% |
| ACCTAAACATACACGGACAC+CGG | - | chr4_2:17669408-17669427 | None:intergenic | 45.0% | |
| TGATAGGGGAGAGAAGATTG+AGG | + | chr4_2:17669519-17669538 | Msa0592330:CDS | 45.0% | |
| ! | GGGAGAGAAGATTGAGGTTT+TGG | + | chr4_2:17669525-17669544 | Msa0592330:CDS | 45.0% |
| ACTCGAATGACGTCCTTGTT+AGG | + | chr4_2:17669726-17669745 | Msa0592330:intron | 45.0% | |
| AAATGGTATGGCTGTTGTGC+AGG | + | chr4_2:17670166-17670185 | Msa0592330:intron | 45.0% | |
| TTGTGCAGGCACAAGATTTC+AGG | + | chr4_2:17670180-17670199 | Msa0592330:intron | 45.0% | |
| CCCAATTGAGGAGAAAGATG+TGG | + | chr4_2:17670213-17670232 | Msa0592330:CDS | 45.0% | |
| GAAGGGAAGTGAATAAGGTG+TGG | + | chr4_2:17670458-17670477 | Msa0592330:three_prime_UTR | 45.0% | |
| GGAAGTGAATAAGGTGTGGT+AGG | + | chr4_2:17670462-17670481 | Msa0592330:three_prime_UTR | 45.0% | |
| !! | TGGAGTGACTGTTGGTGTTT+TGG | + | chr4_2:17670596-17670615 | Msa0592330:three_prime_UTR | 45.0% |
| !!! | AAGATTTTATATTTTATTTT+TGG | - | chr4_2:17666827-17666846 | None:intergenic | 5.0% |
| !! | TATATTTAATTAATGTTTAA+TGG | + | chr4_2:17667527-17667546 | Msa0592330:intron | 5.0% |
| !!! | TAAAAATAAAATATGATTTT+AGG | + | chr4_2:17667605-17667624 | Msa0592330:intron | 5.0% |
| !! | TAGCTTTGTGGCTCGTGGTA+CGG | + | chr4_2:17666921-17666940 | Msa0592330:CDS | 50.0% |
| TCGTGGTACGGTGATTCTTG+CGG | + | chr4_2:17666933-17666952 | Msa0592330:CDS | 50.0% | |
| GTTGTAGCAGTGGAGTCTGT+TGG | + | chr4_2:17668094-17668113 | Msa0592330:CDS | 50.0% | |
| !! | CTTGGTTTGTACCCGTGATC+TGG | + | chr4_2:17668788-17668807 | Msa0592330:intron | 50.0% |
| TCTCTTGTGCAGAGACAGTG+TGG | - | chr4_2:17668857-17668876 | None:intergenic | 50.0% | |
| ! | GGATTTAGCTTCAGGTCGGA+AGG | - | chr4_2:17669365-17669384 | None:intergenic | 50.0% |
| TCCGGTGTCCGTGTATGTTT+AGG | + | chr4_2:17669404-17669423 | Msa0592330:intron | 50.0% | |
| AACTGAGAACCTTCGCTCTC+AGG | + | chr4_2:17669555-17669574 | Msa0592330:CDS | 50.0% | |
| GCACAAGATTTCAGGCAGCA+GGG | + | chr4_2:17670188-17670207 | Msa0592330:CDS | 50.0% | |
| GCGGAGTACAGTGACTTCAC+AGG | + | chr4_2:17666952-17666971 | Msa0592330:CDS | 55.0% | |
| ATACACGGACACCGGACAGT+AGG | - | chr4_2:17669400-17669419 | None:intergenic | 55.0% | |
| AAGGTCGAACCTGAGAGCGA+AGG | - | chr4_2:17669567-17669586 | None:intergenic | 55.0% | |
| GGCACAAGATTTCAGGCAGC+AGG | + | chr4_2:17670187-17670206 | Msa0592330:intron | 55.0% | |
| GGCAGCAGGGAACCCAATTG+AGG | + | chr4_2:17670201-17670220 | Msa0592330:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 17666712 | 17670645 | 17666712 | ID=Msa0592330;Name=Msa0592330 |
| chr4_2 | mRNA | 17666712 | 17670645 | 17666712 | ID=Msa0592330-mRNA-1;Parent=Msa0592330;Name=Msa0592330-mRNA-1;_AED=0.08;_eAED=0.08;_QI=186|1|1|1|1|1|5|314|219 |
| chr4_2 | exon | 17666712 | 17667087 | 17666712 | ID=Msa0592330-mRNA-1:exon:5045;Parent=Msa0592330-mRNA-1 |
| chr4_2 | exon | 17668086 | 17668227 | 17668086 | ID=Msa0592330-mRNA-1:exon:5046;Parent=Msa0592330-mRNA-1 |
| chr4_2 | exon | 17668313 | 17668433 | 17668313 | ID=Msa0592330-mRNA-1:exon:5047;Parent=Msa0592330-mRNA-1 |
| chr4_2 | exon | 17669514 | 17669576 | 17669514 | ID=Msa0592330-mRNA-1:exon:5048;Parent=Msa0592330-mRNA-1 |
| chr4_2 | exon | 17670188 | 17670645 | 17670188 | ID=Msa0592330-mRNA-1:exon:5049;Parent=Msa0592330-mRNA-1 |
| chr4_2 | five_prime_UTR | 17666712 | 17666897 | 17666712 | ID=Msa0592330-mRNA-1:five_prime_utr;Parent=Msa0592330-mRNA-1 |
| chr4_2 | CDS | 17666898 | 17667087 | 17666898 | ID=Msa0592330-mRNA-1:cds;Parent=Msa0592330-mRNA-1 |
| chr4_2 | CDS | 17668086 | 17668227 | 17668086 | ID=Msa0592330-mRNA-1:cds;Parent=Msa0592330-mRNA-1 |
| chr4_2 | CDS | 17668313 | 17668433 | 17668313 | ID=Msa0592330-mRNA-1:cds;Parent=Msa0592330-mRNA-1 |
| chr4_2 | CDS | 17669514 | 17669576 | 17669514 | ID=Msa0592330-mRNA-1:cds;Parent=Msa0592330-mRNA-1 |
| chr4_2 | CDS | 17670188 | 17670331 | 17670188 | ID=Msa0592330-mRNA-1:cds;Parent=Msa0592330-mRNA-1 |
| chr4_2 | three_prime_UTR | 17670332 | 17670645 | 17670332 | ID=Msa0592330-mRNA-1:three_prime_utr;Parent=Msa0592330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
