Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137560 | XP_039685961.1 | 92.708 | 384 | 14 | 3 | 1 | 374 | 1 | 380 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137560 | sp|Q9C942|CSE_ARATH | 34.828 | 290 | 181 | 3 | 92 | 374 | 38 | 326 | 2.59e-53 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137560 | A0A396K0S6 | 92.708 | 384 | 14 | 3 | 1 | 374 | 1 | 380 | 0.0 | 723 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009640 | Msa0137560 | 0.814639 | 1.390896e-51 | -8.615850e-47 |
| Msa0022470 | Msa0137560 | 0.817419 | 3.330522e-52 | -8.615850e-47 |
| Msa0023060 | Msa0137560 | 0.803942 | 2.739376e-49 | -8.615850e-47 |
| Msa0043740 | Msa0137560 | 0.976634 | 3.347172e-142 | -8.615850e-47 |
| Msa0051960 | Msa0137560 | 0.831878 | 1.300437e-55 | -8.615850e-47 |
| Msa0059440 | Msa0137560 | 0.802242 | 6.155181e-49 | -8.615850e-47 |
| Msa0090090 | Msa0137560 | 0.994555 | 3.226417e-208 | -8.615850e-47 |
| Msa0090380 | Msa0137560 | 0.807338 | 5.306815e-50 | -8.615850e-47 |
| Msa0094710 | Msa0137560 | 0.847991 | 8.146147e-60 | -8.615850e-47 |
| Msa0095940 | Msa0137560 | 0.808794 | 2.599495e-50 | -8.615850e-47 |
| Msa0101960 | Msa0137560 | 0.833208 | 6.084753e-56 | -8.615850e-47 |
| Msa0118010 | Msa0137560 | 0.827692 | 1.359510e-54 | -8.615850e-47 |
| Msa0119430 | Msa0137560 | 0.807543 | 4.802193e-50 | -8.615850e-47 |
| Msa0136270 | Msa0137560 | 0.821006 | 5.078499e-53 | -8.615850e-47 |
| Msa0137560 | Msa0137860 | 0.801411 | 9.121470e-49 | -8.615850e-47 |
| Msa0137560 | Msa0139680 | 0.853086 | 3.014160e-61 | -8.615850e-47 |
| Msa0137560 | Msa0150620 | 0.805531 | 1.276125e-49 | -8.615850e-47 |
| Msa0137560 | Msa0161560 | 0.811884 | 5.599482e-51 | -8.615850e-47 |
| Msa0137560 | Msa0162140 | 0.800513 | 1.391610e-48 | -8.615850e-47 |
| Msa0137560 | Msa0164250 | 0.801771 | 7.692562e-49 | -8.615850e-47 |
| Msa0137560 | Msa0167570 | -0.809877 | 1.522414e-50 | -8.615850e-47 |
| Msa0137560 | Msa0170770 | 0.840873 | 6.687191e-58 | -8.615850e-47 |
| Msa0137560 | Msa0171330 | 0.809247 | 2.079811e-50 | -8.615850e-47 |
| Msa0137560 | Msa0182560 | 0.971701 | 1.400768e-133 | -8.615850e-47 |
| Msa0137560 | Msa0185100 | 0.827816 | 1.269576e-54 | -8.615850e-47 |
| Msa0137560 | Msa0189600 | 0.823058 | 1.699470e-53 | -8.615850e-47 |
| Msa0137560 | Msa0193190 | 0.845355 | 4.277470e-59 | -8.615850e-47 |
| Msa0137560 | Msa0224130 | 0.817568 | 3.082118e-52 | -8.615850e-47 |
| Msa0137560 | Msa0225190 | -0.807347 | 5.283583e-50 | -8.615850e-47 |
| Msa0137560 | Msa0244890 | 0.815916 | 7.234629e-52 | -8.615850e-47 |
| Msa0137560 | Msa0253960 | 0.814571 | 1.439898e-51 | -8.615850e-47 |
| Msa0137560 | Msa0257900 | 0.845869 | 3.102756e-59 | -8.615850e-47 |
| Msa0137560 | Msa0257910 | 0.837704 | 4.441804e-57 | -8.615850e-47 |
| Msa0137560 | Msa0265270 | 0.819242 | 1.286945e-52 | -8.615850e-47 |
| Msa0137560 | Msa0271540 | 0.831408 | 1.697748e-55 | -8.615850e-47 |
| Msa0137560 | Msa0273070 | 0.836166 | 1.097430e-56 | -8.615850e-47 |
| Msa0137560 | Msa0283490 | 0.809147 | 2.184835e-50 | -8.615850e-47 |
| Msa0137560 | Msa0296900 | 0.846721 | 1.817395e-59 | -8.615850e-47 |
| Msa0137560 | Msa0296910 | 0.859866 | 3.075158e-63 | -8.615850e-47 |
| Msa0137560 | Msa0299530 | -0.802179 | 6.343786e-49 | -8.615850e-47 |
| Msa0137560 | Msa0307420 | 0.836375 | 9.707974e-57 | -8.615850e-47 |
| Msa0137560 | Msa0319260 | 0.814332 | 1.625916e-51 | -8.615850e-47 |
| Msa0137560 | Msa0319270 | 0.822848 | 1.901297e-53 | -8.615850e-47 |
| Msa0137560 | Msa0331970 | 0.804239 | 2.377034e-49 | -8.615850e-47 |
| Msa0137560 | Msa0335070 | 0.869393 | 3.202862e-66 | -8.615850e-47 |
| Msa0137560 | Msa0335080 | 0.870112 | 1.866059e-66 | -8.615850e-47 |
| Msa0137560 | Msa0345050 | 0.808418 | 3.127736e-50 | -8.615850e-47 |
| Msa0137560 | Msa0345980 | 0.812299 | 4.545980e-51 | -8.615850e-47 |
| Msa0137560 | Msa0355550 | 0.827531 | 1.485991e-54 | -8.615850e-47 |
| Msa0137560 | Msa0383900 | 0.822611 | 2.159867e-53 | -8.615850e-47 |
| Msa0137560 | Msa0387040 | 0.847227 | 1.321067e-59 | -8.615850e-47 |
| Msa0137560 | Msa0393100 | 0.807475 | 4.964665e-50 | -8.615850e-47 |
| Msa0137560 | Msa0408340 | 0.826555 | 2.543715e-54 | -8.615850e-47 |
| Msa0137560 | Msa0415100 | 0.814028 | 1.897416e-51 | -8.615850e-47 |
| Msa0137560 | Msa0415640 | 0.838246 | 3.223758e-57 | -8.615850e-47 |
| Msa0137560 | Msa0434300 | 0.814257 | 1.689102e-51 | -8.615850e-47 |
| Msa0137560 | Msa0434400 | 0.824870 | 6.383961e-54 | -8.615850e-47 |
| Msa0137560 | Msa0460600 | 0.817228 | 3.676459e-52 | -8.615850e-47 |
| Msa0137560 | Msa0471930 | 0.803738 | 3.020301e-49 | -8.615850e-47 |
| Msa0137560 | Msa0480930 | 0.824473 | 7.921840e-54 | -8.615850e-47 |
| Msa0137560 | Msa0488580 | 0.813370 | 2.649196e-51 | -8.615850e-47 |
| Msa0137560 | Msa0501410 | 0.840104 | 1.062961e-57 | -8.615850e-47 |
| Msa0137560 | Msa0516570 | 0.802715 | 4.917794e-49 | -8.615850e-47 |
| Msa0137560 | Msa0517270 | 0.832483 | 9.212164e-56 | -8.615850e-47 |
| Msa0137560 | Msa0519100 | -0.802319 | 5.937022e-49 | -8.615850e-47 |
| Msa0137560 | Msa0522170 | 0.802271 | 6.072260e-49 | -8.615850e-47 |
| Msa0137560 | Msa0534270 | 0.833067 | 6.598368e-56 | -8.615850e-47 |
| Msa0137560 | Msa0536540 | 0.855182 | 7.487794e-62 | -8.615850e-47 |
| Msa0137560 | Msa0558390 | 0.802475 | 5.512486e-49 | -8.615850e-47 |
| Msa0137560 | Msa0558570 | 0.827586 | 1.441233e-54 | -8.615850e-47 |
| Msa0137560 | Msa0567430 | 0.812281 | 4.587173e-51 | -8.615850e-47 |
| Msa0137560 | Msa0567480 | 0.806642 | 7.447886e-50 | -8.615850e-47 |
| Msa0137560 | Msa0577660 | 0.806275 | 8.902003e-50 | -8.615850e-47 |
| Msa0137560 | Msa0577750 | 0.802375 | 5.779557e-49 | -8.615850e-47 |
| Msa0137560 | Msa0588710 | 0.848965 | 4.377710e-60 | -8.615850e-47 |
| Msa0137560 | Msa0590390 | 0.801029 | 1.091800e-48 | -8.615850e-47 |
| Msa0137560 | Msa0592650 | 0.856163 | 3.874429e-62 | -8.615850e-47 |
| Msa0137560 | Msa0592660 | 0.839268 | 1.753582e-57 | -8.615850e-47 |
| Msa0137560 | Msa0604570 | 0.816422 | 5.576993e-52 | -8.615850e-47 |
| Msa0137560 | Msa0608980 | 0.828327 | 9.563733e-55 | -8.615850e-47 |
| Msa0137560 | Msa0614380 | 0.802247 | 6.142574e-49 | -8.615850e-47 |
| Msa0137560 | Msa0619310 | 0.838974 | 2.090074e-57 | -8.615850e-47 |
| Msa0137560 | Msa0635270 | 0.808418 | 3.127195e-50 | -8.615850e-47 |
| Msa0137560 | Msa0662460 | 0.839690 | 1.362604e-57 | -8.615850e-47 |
| Msa0137560 | Msa0662580 | 0.835323 | 1.793877e-56 | -8.615850e-47 |
| Msa0137560 | Msa0671860 | 0.844835 | 5.910977e-59 | -8.615850e-47 |
| Msa0137560 | Msa0685060 | 0.804809 | 1.807408e-49 | -8.615850e-47 |
| Msa0137560 | Msa0685240 | 0.805964 | 1.035308e-49 | -8.615850e-47 |
| Msa0137560 | Msa0696100 | 0.805186 | 1.507154e-49 | -8.615850e-47 |
| Msa0137560 | Msa0697590 | 0.802455 | 5.566016e-49 | -8.615850e-47 |
| Msa0137560 | Msa0704560 | 0.804635 | 1.965024e-49 | -8.615850e-47 |
| Msa0137560 | Msa0704680 | 0.835637 | 1.494283e-56 | -8.615850e-47 |
| Msa0137560 | Msa0709140 | 0.849824 | 2.522418e-60 | -8.615850e-47 |
| Msa0137560 | Msa0717860 | 0.811100 | 8.286909e-51 | -8.615850e-47 |
| Msa0137560 | Msa0740630 | 0.843943 | 1.026658e-58 | -8.615850e-47 |
| Msa0137560 | Msa0742430 | 0.849403 | 3.306675e-60 | -8.615850e-47 |
| Msa0137560 | Msa0753590 | -0.808315 | 3.290483e-50 | -8.615850e-47 |
| Msa0137560 | Msa0753930 | 0.825918 | 3.606423e-54 | -8.615850e-47 |
| Msa0137560 | Msa0758520 | 0.809483 | 1.850674e-50 | -8.615850e-47 |
| Msa0137560 | Msa0758570 | 0.807317 | 5.362802e-50 | -8.615850e-47 |
| Msa0137560 | Msa0758850 | 0.857956 | 1.146082e-62 | -8.615850e-47 |
| Msa0137560 | Msa0788660 | 0.815432 | 9.273781e-52 | -8.615850e-47 |
| Msa0137560 | Msa0790920 | 0.846722 | 1.816504e-59 | -8.615850e-47 |
| Msa0137560 | Msa0791740 | 0.818440 | 1.958134e-52 | -8.615850e-47 |
| Msa0137560 | Msa0804870 | 0.811162 | 8.036390e-51 | -8.615850e-47 |
| Msa0137560 | Msa0807020 | 0.814610 | 1.411349e-51 | -8.615850e-47 |
| Msa0137560 | Msa0810420 | 0.801259 | 9.796000e-49 | -8.615850e-47 |
| Msa0137560 | Msa0820880 | 0.845519 | 3.860853e-59 | -8.615850e-47 |
| Msa0137560 | Msa0823540 | 0.803099 | 4.096679e-49 | -8.615850e-47 |
| Msa0137560 | Msa0832950 | 0.823850 | 1.109106e-53 | -8.615850e-47 |
| Msa0137560 | Msa0833270 | 0.805157 | 1.528969e-49 | -8.615850e-47 |
| Msa0137560 | Msa0838090 | 0.859065 | 5.352951e-63 | -8.615850e-47 |
| Msa0137560 | Msa0838870 | 0.817356 | 3.440460e-52 | -8.615850e-47 |
| Msa0137560 | Msa0840780 | 0.809190 | 2.138480e-50 | -8.615850e-47 |
| Msa0137560 | Msa0859040 | 0.851465 | 8.718896e-61 | -8.615850e-47 |
| Msa0137560 | Msa0862620 | 0.843350 | 1.478729e-58 | -8.615850e-47 |
| Msa0137560 | Msa0882480 | -0.817441 | 3.292091e-52 | -8.615850e-47 |
| Msa0137560 | Msa0930730 | 0.800015 | 1.757394e-48 | -8.615850e-47 |
| Msa0137560 | Msa0966580 | 0.823356 | 1.447623e-53 | -8.615850e-47 |
| Msa0137560 | Msa1011250 | 0.848311 | 6.646612e-60 | -8.615850e-47 |
| Msa0137560 | Msa1027910 | 0.843080 | 1.745323e-58 | -8.615850e-47 |
| Msa0137560 | Msa1030210 | 0.827302 | 1.686748e-54 | -8.615850e-47 |
| Msa0137560 | Msa1030240 | 0.834288 | 3.268408e-56 | -8.615850e-47 |
| Msa0137560 | Msa1031460 | 0.837331 | 5.537735e-57 | -8.615850e-47 |
| Msa0137560 | Msa1043120 | 0.823803 | 1.138035e-53 | -8.615850e-47 |
| Msa0137560 | Msa1069250 | 0.810621 | 1.052345e-50 | -8.615850e-47 |
| Msa0137560 | Msa1069890 | 0.801719 | 7.885738e-49 | -8.615850e-47 |
| Msa0137560 | Msa1070540 | 0.817382 | 3.395153e-52 | -8.615850e-47 |
| Msa0137560 | Msa1082520 | 0.803523 | 3.347652e-49 | -8.615850e-47 |
| Msa0137560 | Msa1084640 | 0.806979 | 6.321690e-50 | -8.615850e-47 |
| Msa0137560 | Msa1084890 | 0.854290 | 1.357933e-61 | -8.615850e-47 |
| Msa0137560 | Msa1089190 | 0.839440 | 1.582585e-57 | -8.615850e-47 |
| Msa0137560 | Msa1092310 | 0.817345 | 3.459952e-52 | -8.615850e-47 |
| Msa0137560 | Msa1101240 | 0.822568 | 2.209685e-53 | -8.615850e-47 |
| Msa0137560 | Msa1109670 | 0.823922 | 1.066851e-53 | -8.615850e-47 |
| Msa0137560 | Msa1114670 | 0.822544 | 2.238560e-53 | -8.615850e-47 |
| Msa0137560 | Msa1116840 | 0.836393 | 9.609186e-57 | -8.615850e-47 |
| Msa0137560 | Msa1120580 | 0.822690 | 2.069907e-53 | -8.615850e-47 |
| Msa0137560 | Msa1131790 | 0.839591 | 1.445487e-57 | -8.615850e-47 |
| Msa0137560 | Msa1132980 | 0.821432 | 4.049540e-53 | -8.615850e-47 |
| Msa0137560 | Msa1136760 | 0.859388 | 4.281324e-63 | -8.615850e-47 |
| Msa0137560 | Msa1157110 | 0.828325 | 9.573121e-55 | -8.615850e-47 |
| Msa0137560 | Msa1159170 | 0.822414 | 2.399444e-53 | -8.615850e-47 |
| Msa0137560 | Msa1171450 | 0.822805 | 1.946396e-53 | -8.615850e-47 |
| Msa0137560 | Msa1208990 | 0.842604 | 2.335911e-58 | -8.615850e-47 |
| Msa0137560 | Msa1246790 | 0.840889 | 6.623571e-58 | -8.615850e-47 |
| Msa0137560 | Msa1256060 | 0.845407 | 4.139912e-59 | -8.615850e-47 |
| Msa0137560 | Msa1276960 | 0.811490 | 6.822819e-51 | -8.615850e-47 |
| Msa0137560 | Msa1279060 | 0.804540 | 2.056774e-49 | -8.615850e-47 |
| Msa0137560 | Msa1280960 | 0.814515 | 1.481723e-51 | -8.615850e-47 |
| Msa0137560 | Msa1281690 | 0.819931 | 8.960292e-53 | -8.615850e-47 |
| Msa0137560 | Msa1296240 | 0.828251 | 9.975730e-55 | -8.615850e-47 |
| Msa0137560 | Msa1307530 | 0.848958 | 4.399059e-60 | -8.615850e-47 |
| Msa0137560 | Msa1362850 | 0.825350 | 4.918597e-54 | -8.615850e-47 |
| Msa0137560 | Msa1364080 | 0.828420 | 9.078487e-55 | -8.615850e-47 |
| Msa0137560 | Msa1379020 | 0.808953 | 2.403711e-50 | -8.615850e-47 |
| Msa0137560 | Msa1398140 | 0.853265 | 2.678310e-61 | -8.615850e-47 |
| Msa0137560 | Msa1398900 | 0.827662 | 1.382117e-54 | -8.615850e-47 |
| Msa0137560 | Msa1400340 | 0.801423 | 9.068118e-49 | -8.615850e-47 |
| Msa0137560 | Msa1407880 | 0.809614 | 1.734863e-50 | -8.615850e-47 |
| Msa0137560 | Msa1420940 | 0.808269 | 3.364550e-50 | -8.615850e-47 |
| Msa0137560 | Msa1433410 | 0.809515 | 1.821116e-50 | -8.615850e-47 |
| Msa0137560 | Msa1439650 | 0.817668 | 2.927319e-52 | -8.615850e-47 |
| Msa0137560 | Msa1439780 | 0.803556 | 3.295675e-49 | -8.615850e-47 |
| Msa0137560 | Msa1447870 | 0.853580 | 2.175885e-61 | -8.615850e-47 |
| Msa0137560 | Msa1447880 | 0.860362 | 2.177322e-63 | -8.615850e-47 |
| Msa0137560 | Msa1451990 | 0.842064 | 3.248279e-58 | -8.615850e-47 |
| Msa0137560 | Msa1455200 | 0.837541 | 4.890991e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137560 | MtrunA17_Chr1g0209741 | 92.708 | 384 | 14 | 3 | 1 | 374 | 1 | 380 | 0.0 | 723 |
| Msa0137560 | MtrunA17_Chr5g0423541 | 66.582 | 395 | 108 | 5 | 1 | 373 | 1 | 393 | 0.0 | 548 |
| Msa0137560 | MtrunA17_Chr7g0215451 | 57.704 | 331 | 129 | 2 | 49 | 369 | 7 | 336 | 1.90e-139 | 400 |
| Msa0137560 | MtrunA17_Chr6g0457581 | 55.891 | 331 | 135 | 2 | 49 | 369 | 6 | 335 | 2.34e-137 | 395 |
| Msa0137560 | MtrunA17_Chr6g0460121 | 60.140 | 286 | 113 | 1 | 84 | 369 | 14 | 298 | 1.95e-128 | 371 |
| Msa0137560 | MtrunA17_Chr6g0484431 | 52.000 | 275 | 120 | 3 | 47 | 310 | 8 | 281 | 2.33e-102 | 303 |
| Msa0137560 | MtrunA17_Chr1g0195501 | 45.745 | 282 | 152 | 1 | 90 | 371 | 11 | 291 | 1.81e-87 | 267 |
| Msa0137560 | MtrunA17_Chr7g0269371 | 43.571 | 280 | 156 | 1 | 90 | 369 | 11 | 288 | 6.11e-86 | 264 |
| Msa0137560 | MtrunA17_Chr1g0212901 | 43.571 | 280 | 157 | 1 | 93 | 372 | 16 | 294 | 6.23e-83 | 255 |
| Msa0137560 | MtrunA17_Chr4g0047891 | 40.288 | 278 | 166 | 0 | 95 | 372 | 47 | 324 | 1.08e-71 | 226 |
| Msa0137560 | MtrunA17_Chr1g0199771 | 33.770 | 305 | 189 | 5 | 66 | 368 | 19 | 312 | 6.33e-56 | 186 |
| Msa0137560 | MtrunA17_Chr4g0071671 | 37.050 | 278 | 173 | 2 | 98 | 374 | 41 | 317 | 2.46e-55 | 184 |
| Msa0137560 | MtrunA17_Chr3g0140391 | 36.071 | 280 | 165 | 8 | 95 | 371 | 103 | 371 | 1.14e-44 | 158 |
| Msa0137560 | MtrunA17_Chr6g0479331 | 35.915 | 284 | 172 | 8 | 89 | 371 | 116 | 390 | 6.80e-38 | 140 |
| Msa0137560 | MtrunA17_Chr1g0209761 | 83.099 | 71 | 12 | 0 | 304 | 374 | 12 | 82 | 1.42e-33 | 119 |
| Msa0137560 | MtrunA17_Chr6g0484421 | 53.968 | 63 | 29 | 0 | 311 | 373 | 1 | 63 | 1.39e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137560 | AT1G77420.1 | 63.265 | 343 | 116 | 1 | 39 | 371 | 36 | 378 | 1.37e-160 | 456 |
| Msa0137560 | AT5G16120.3 | 56.839 | 329 | 131 | 2 | 51 | 369 | 10 | 337 | 1.39e-135 | 391 |
| Msa0137560 | AT5G16120.1 | 56.839 | 329 | 131 | 2 | 51 | 369 | 10 | 337 | 1.39e-135 | 391 |
| Msa0137560 | AT5G16120.2 | 56.839 | 329 | 131 | 2 | 51 | 369 | 28 | 355 | 4.25e-135 | 390 |
| Msa0137560 | AT5G16120.4 | 56.839 | 329 | 131 | 2 | 51 | 369 | 42 | 369 | 4.47e-135 | 391 |
| Msa0137560 | AT3G62860.1 | 41.489 | 282 | 163 | 1 | 90 | 371 | 12 | 291 | 1.60e-83 | 258 |
| Msa0137560 | AT2G39420.1 | 44.326 | 282 | 156 | 1 | 92 | 373 | 16 | 296 | 3.58e-83 | 256 |
| Msa0137560 | AT2G47630.1 | 42.908 | 282 | 161 | 0 | 90 | 371 | 12 | 293 | 4.07e-83 | 257 |
| Msa0137560 | AT2G39410.2 | 45.714 | 280 | 151 | 1 | 92 | 371 | 16 | 294 | 7.63e-83 | 255 |
| Msa0137560 | AT1G11090.1 | 44.245 | 278 | 155 | 0 | 95 | 372 | 38 | 315 | 1.26e-79 | 247 |
| Msa0137560 | AT3G55180.1 | 43.310 | 284 | 161 | 0 | 90 | 373 | 8 | 291 | 1.10e-78 | 244 |
| Msa0137560 | AT2G39400.1 | 42.349 | 281 | 161 | 1 | 93 | 373 | 11 | 290 | 8.12e-76 | 237 |
| Msa0137560 | AT3G62860.2 | 41.870 | 246 | 143 | 0 | 126 | 371 | 3 | 248 | 1.53e-72 | 228 |
| Msa0137560 | AT2G47630.2 | 43.460 | 237 | 134 | 0 | 137 | 373 | 14 | 250 | 7.96e-69 | 219 |
| Msa0137560 | AT2G47630.3 | 43.460 | 237 | 134 | 0 | 137 | 373 | 34 | 270 | 1.65e-68 | 219 |
| Msa0137560 | AT3G55190.1 | 38.516 | 283 | 172 | 2 | 92 | 373 | 16 | 297 | 1.01e-65 | 211 |
| Msa0137560 | AT5G14980.1 | 34.982 | 283 | 181 | 3 | 90 | 371 | 35 | 315 | 4.29e-59 | 194 |
| Msa0137560 | AT5G19290.1 | 34.982 | 283 | 182 | 2 | 93 | 374 | 38 | 319 | 2.97e-56 | 187 |
| Msa0137560 | AT1G52760.1 | 34.828 | 290 | 181 | 3 | 92 | 374 | 38 | 326 | 2.63e-54 | 182 |
| Msa0137560 | AT2G39400.2 | 40.094 | 212 | 126 | 1 | 93 | 304 | 11 | 221 | 6.02e-50 | 168 |
| Msa0137560 | AT5G11650.1 | 36.691 | 278 | 160 | 8 | 95 | 368 | 110 | 375 | 2.99e-42 | 152 |
| Msa0137560 | AT1G73480.1 | 34.122 | 296 | 171 | 10 | 83 | 372 | 186 | 463 | 6.63e-40 | 147 |
| Msa0137560 | AT1G18360.1 | 34.520 | 281 | 171 | 6 | 95 | 372 | 112 | 382 | 1.47e-38 | 142 |
| Msa0137560 | AT5G11650.2 | 34.171 | 199 | 114 | 7 | 95 | 287 | 110 | 297 | 2.22e-21 | 93.6 |
| Msa0137560 | AT2G39410.1 | 43.182 | 88 | 49 | 1 | 92 | 179 | 16 | 102 | 3.35e-20 | 85.9 |
Find 95 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCATTATTGATACTTCA+TGG | 0.274482 | 1_3:+70071760 | Msa0137560:CDS |
| TATTCTTCTTTGGCTCATCT+TGG | 0.291232 | 1_3:-70072063 | None:intergenic |
| AGGAGGTTACCATGGCATTT+TGG | 0.302834 | 1_3:+70071870 | Msa0137560:CDS |
| AACTTGTAGTAGTAGGAAAT+TGG | 0.315204 | 1_3:+70072259 | Msa0137560:three_prime_UTR |
| TTGCATTCACTCTCAGTCTC+AGG | 0.316151 | 1_3:-70069340 | None:intergenic |
| ACTTGCACTTTCTTCTTTGA+AGG | 0.335129 | 1_3:+70070169 | Msa0137560:CDS |
| TTGATTGGAACGCCATGTTC+TGG | 0.338027 | 1_3:-70070112 | None:intergenic |
| ACCATGAGATGATGTCATTA+TGG | 0.339733 | 1_3:-70071924 | None:intergenic |
| GCAATGGATTTCCCAGGTTT+CGG | 0.351323 | 1_3:+70070303 | Msa0137560:CDS |
| GCTCCATGAAGTATCAATAA+TGG | 0.356305 | 1_3:-70071763 | None:intergenic |
| ATTTATATTCGGACAGTCAA+TGG | 0.361185 | 1_3:+70070816 | Msa0137560:CDS |
| TTAGTTTAACTTGTAGTAGT+AGG | 0.364902 | 1_3:+70072252 | Msa0137560:three_prime_UTR |
| TAAAGAAACTGGCTCACTAA+TGG | 0.370262 | 1_3:-70071805 | None:intergenic |
| AGAACCCGGCAAGAGAAAAT+TGG | 0.374826 | 1_3:+70071432 | Msa0137560:CDS |
| ATGCTTTCTCATAAAGAAAC+TGG | 0.376112 | 1_3:-70071816 | None:intergenic |
| GATTTGCCGCAATTTATATT+CGG | 0.378150 | 1_3:+70070805 | Msa0137560:CDS |
| TGCTCTTAAAGCTCATTTGA+AGG | 0.379148 | 1_3:+70070849 | Msa0137560:CDS |
| TCATCTCATGGTTAGACATT+AGG | 0.392634 | 1_3:+70071935 | Msa0137560:CDS |
| ATTCTTCTTTGGCTCATCTT+GGG | 0.395376 | 1_3:-70072062 | None:intergenic |
| ATGACAACGACACTCCGATT+TGG | 0.395939 | 1_3:+70069251 | Msa0137560:CDS |
| TGATATTGGATTATGGTGTA+AGG | 0.399930 | 1_3:-70069297 | None:intergenic |
| ACAGAAGAAATTCTTTCATC+AGG | 0.403357 | 1_3:-70071901 | None:intergenic |
| ACAAGTTAAACTAACAGAAA+TGG | 0.404712 | 1_3:-70072243 | None:intergenic |
| ATGACTCCGTCCCAATCATT+TGG | 0.412702 | 1_3:-70070874 | None:intergenic |
| ATTTGAAGGAACCAAATGAT+TGG | 0.414265 | 1_3:+70070863 | Msa0137560:CDS |
| TTCAAAGTTCTTAAGTCACT+TGG | 0.425978 | 1_3:-70072096 | None:intergenic |
| GATTATGGTGTAAGGGTAAA+GGG | 0.427866 | 1_3:-70069289 | None:intergenic |
| TGAAAGGAATTCAAGGGGAT+TGG | 0.438456 | 1_3:+70070066 | Msa0137560:CDS |
| GGTGTAAGGGTAAAGGGAAA+TGG | 0.442389 | 1_3:-70069283 | None:intergenic |
| ACTTGATCATATCTTATTCA+AGG | 0.446112 | 1_3:+70069481 | Msa0137560:CDS |
| AGAAAGTGGTGACTGATTAT+CGG | 0.447228 | 1_3:-70072121 | None:intergenic |
| TGCATTCACTCTCAGTCTCA+GGG | 0.454337 | 1_3:-70069339 | None:intergenic |
| AACACCTTCAAGATTGTAGT+TGG | 0.461576 | 1_3:-70071337 | None:intergenic |
| GAACATGGCGTTCCAATCAA+AGG | 0.465267 | 1_3:+70070115 | Msa0137560:CDS |
| AGCTCCATGGTTACTGAGCT+TGG | 0.465639 | 1_3:-70069224 | None:intergenic |
| AACATGGCGTTCCAATCAAA+GGG | 0.467021 | 1_3:+70070116 | Msa0137560:CDS |
| CCTTCAGATAAACCGAAACC+TGG | 0.470797 | 1_3:-70070315 | None:intergenic |
| TTTGAAGGAACCAAATGATT+GGG | 0.476356 | 1_3:+70070864 | Msa0137560:CDS |
| CCAGGTTTCGGTTTATCTGA+AGG | 0.476945 | 1_3:+70070315 | Msa0137560:CDS |
| CCTTGTAGCTCCAATGTGTA+AGG | 0.478506 | 1_3:+70070897 | Msa0137560:CDS |
| GATCAAACACGATTAAGAAC+TGG | 0.479472 | 1_3:+70071577 | Msa0137560:CDS |
| GGATTATGGTGTAAGGGTAA+AGG | 0.480388 | 1_3:-70069290 | None:intergenic |
| CTCATCGCTGATACCTTCAA+TGG | 0.484364 | 1_3:-70069375 | None:intergenic |
| ATCAAGGTTAAGAGAAGCTA+TGG | 0.486484 | 1_3:-70069405 | None:intergenic |
| ACCGCCAACTACAATCTTGA+AGG | 0.491450 | 1_3:+70071333 | Msa0137560:CDS |
| TGCGGCAAATCCCTCACCTC+TGG | 0.492405 | 1_3:-70070793 | None:intergenic |
| AGTTCAGATAGATCCTTGTA+TGG | 0.502102 | 1_3:-70071400 | None:intergenic |
| TTGGTTATCAGTGGTATGAA+AGG | 0.504463 | 1_3:+70070050 | Msa0137560:intron |
| TTTATATTCGGACAGTCAAT+GGG | 0.504492 | 1_3:+70070817 | Msa0137560:CDS |
| GGTTTATCTGAAGGATTACA+TGG | 0.507433 | 1_3:+70070324 | Msa0137560:CDS |
| GATATTGGATTATGGTGTAA+GGG | 0.515166 | 1_3:-70069296 | None:intergenic |
| GTTTATGCAATGGATTTCCC+AGG | 0.516962 | 1_3:+70070297 | Msa0137560:CDS |
| TACGAGAAGGTGCATGATCA+AGG | 0.526915 | 1_3:-70069421 | None:intergenic |
| ATCTACATACTTCTAGAAAG+TGG | 0.527281 | 1_3:-70072135 | None:intergenic |
| TGGATTTGGTGTTTATGCAA+TGG | 0.528835 | 1_3:+70070287 | Msa0137560:CDS |
| CCTTACACATTGGAGCTACA+AGG | 0.538468 | 1_3:-70070897 | None:intergenic |
| TCAAAGTTCTTAAGTCACTT+GGG | 0.541694 | 1_3:-70072095 | None:intergenic |
| AGTGGTATGAAAGGAATTCA+AGG | 0.543776 | 1_3:+70070059 | Msa0137560:intron |
| TCGACTAAATCATCAAAACT+TGG | 0.545949 | 1_3:-70070354 | None:intergenic |
| ACTTCATGGAGCAGAAGATA+AGG | 0.548587 | 1_3:+70071774 | Msa0137560:CDS |
| GACAGCTAGACCAGAGGTGA+GGG | 0.549583 | 1_3:+70070783 | Msa0137560:intron |
| GGCAAAACTATTTCCATACA+AGG | 0.558367 | 1_3:+70071387 | Msa0137560:CDS |
| TTGATTGCCAAGATATCAGA+AGG | 0.558672 | 1_3:+70071304 | Msa0137560:intron |
| ACCTTCAAGATTGTAGTTGG+CGG | 0.559875 | 1_3:-70071334 | None:intergenic |
| ATAATTGTTCAGGTATTGCA+AGG | 0.560443 | 1_3:+70070250 | Msa0137560:intron |
| TCCATGGTTACTGAGCTTGG+TGG | 0.563373 | 1_3:-70069221 | None:intergenic |
| AAGACACTAAAGATCTATGA+AGG | 0.565411 | 1_3:+70071850 | Msa0137560:CDS |
| AACACGATTAAGAACTGGCA+TGG | 0.566445 | 1_3:+70071582 | Msa0137560:CDS |
| TCAAGATATTGAGTCACAGT+TGG | 0.570097 | 1_3:+70071621 | Msa0137560:CDS |
| GTGGTATGAAAGGAATTCAA+GGG | 0.572692 | 1_3:+70070060 | Msa0137560:intron |
| TATTGAGTCACAGTTGGAGA+AGG | 0.587825 | 1_3:+70071627 | Msa0137560:CDS |
| ATCTATGAAGGAGGTTACCA+TGG | 0.587933 | 1_3:+70071862 | Msa0137560:CDS |
| CTTGTCTAAAATGATGCCAA+AGG | 0.592063 | 1_3:+70071366 | Msa0137560:CDS |
| TCCATAATGACATCATCTCA+TGG | 0.596292 | 1_3:+70071923 | Msa0137560:CDS |
| AAAAGCTGGATGCCAGAACA+TGG | 0.599820 | 1_3:+70070100 | Msa0137560:CDS |
| TTTGTTAGTTTGTTAGAGTG+TGG | 0.611501 | 1_3:+70072211 | Msa0137560:three_prime_UTR |
| CTGTGACTCAATATCTTGAG+TGG | 0.612313 | 1_3:-70071617 | None:intergenic |
| AAGGAACCAAATGATTGGGA+CGG | 0.614530 | 1_3:+70070868 | Msa0137560:CDS |
| GACTGTCCGAATATAAATTG+CGG | 0.618570 | 1_3:-70070811 | None:intergenic |
| TCCACCAAGCTCAGTAACCA+TGG | 0.619324 | 1_3:+70069220 | Msa0137560:exon |
| CTTCAGATAAACCGAAACCT+GGG | 0.619450 | 1_3:-70070314 | None:intergenic |
| CGTTGTCATAGATAGCTCCA+TGG | 0.621711 | 1_3:-70069237 | None:intergenic |
| ATATTCGGACAGTCAATGGG+TGG | 0.631708 | 1_3:+70070820 | Msa0137560:CDS |
| GGTGCTCAAGATAATTGTGG+TGG | 0.638846 | 1_3:+70071956 | Msa0137560:exon |
| TGACAGCTAGACCAGAGGTG+AGG | 0.639641 | 1_3:+70070782 | Msa0137560:intron |
| AATGGACATACCTTACACAT+TGG | 0.639810 | 1_3:-70070907 | None:intergenic |
| TTAGGTGCTCAAGATAATTG+TGG | 0.643784 | 1_3:+70071953 | Msa0137560:exon |
| GTTCACCTTCCAAAATGCCA+TGG | 0.645530 | 1_3:-70071879 | None:intergenic |
| TGTCGAACATGTCTACGAGA+AGG | 0.657476 | 1_3:-70069434 | None:intergenic |
| TTGCTGATGCACATGAGTGA+AGG | 0.663071 | 1_3:-70069459 | None:intergenic |
| TGGTATGAAAGGAATTCAAG+GGG | 0.670152 | 1_3:+70070061 | Msa0137560:CDS |
| TACATTGACAGCTAGACCAG+AGG | 0.671347 | 1_3:+70070777 | Msa0137560:intron |
| ACACTAAAGATCTATGAAGG+AGG | 0.678648 | 1_3:+70071853 | Msa0137560:CDS |
| TGGAGTTTGAACAGAGCATG+TGG | 0.689301 | 1_3:-70069201 | None:intergenic |
| ACATGGCGTTCCAATCAAAG+GGG | 0.730927 | 1_3:+70070117 | Msa0137560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGAAGATTAGTTTAAAA+AGG | + | chr1_3:70070520-70070539 | Msa0137560:intron | 15.0% |
| !! | AAAAAATATAGCTATAGTAT+AGG | - | chr1_3:70071703-70071722 | None:intergenic | 15.0% |
| !!! | TTTCATTCTGAATTTTATTA+TGG | + | chr1_3:70071989-70072008 | Msa0137560:three_prime_UTR | 15.0% |
| !!! | TTTTATTTTTATAGCAGTTT+AGG | + | chr1_3:70072324-70072343 | Msa0137560:three_prime_UTR | 15.0% |
| !!! | AGTTTTTTGATATTGGATTA+TGG | - | chr1_3:70069307-70069326 | None:intergenic | 20.0% |
| !!! | TTTGTAGAGTTTTTTGATAT+TGG | - | chr1_3:70069314-70069333 | None:intergenic | 20.0% |
| !!! | TGATGTCTATACATTAATTT+TGG | + | chr1_3:70070031-70070050 | Msa0137560:intron | 20.0% |
| !!! | ATTGATTTGAATAATTGTTC+AGG | + | chr1_3:70070240-70070259 | Msa0137560:intron | 20.0% |
| !! | GAATTCCATACAAAAATTAA+AGG | + | chr1_3:70070387-70070406 | Msa0137560:CDS | 20.0% |
| !!! | TCATACCTTTAATTTTTGTA+TGG | - | chr1_3:70070395-70070414 | None:intergenic | 20.0% |
| !! | TAATCCAAGATCAATTTATA+TGG | + | chr1_3:70071193-70071212 | Msa0137560:intron | 20.0% |
| !! | AATCCAAGATCAATTTATAT+GGG | + | chr1_3:70071194-70071213 | Msa0137560:intron | 20.0% |
| !! | TCATTGTCATATATAATTTC+AGG | + | chr1_3:70071732-70071751 | Msa0137560:intron | 20.0% |
| ! | ACTTGATCATATCTTATTCA+AGG | + | chr1_3:70069481-70069500 | Msa0137560:CDS | 25.0% |
| !! | TATGAAATGAAAAAAGTGTG+AGG | - | chr1_3:70069526-70069545 | None:intergenic | 25.0% |
| !! | TTTCTTTGTTTGTGTTTCAT+TGG | + | chr1_3:70069573-70069592 | Msa0137560:intron | 25.0% |
| ! | TTCAAATAAGTCGATCTAAA+GGG | - | chr1_3:70069776-70069795 | None:intergenic | 25.0% |
| ! | AGAACTTATGAAAACATCTT+AGG | - | chr1_3:70069920-70069939 | None:intergenic | 25.0% |
| ! | AAGCACTTATTAGACTATTT+GGG | - | chr1_3:70069943-70069962 | None:intergenic | 25.0% |
| ! | TAAGCACTTATTAGACTATT+TGG | - | chr1_3:70069944-70069963 | None:intergenic | 25.0% |
| ! | ATAACACATTTCACAGTTTA+GGG | - | chr1_3:70070003-70070022 | None:intergenic | 25.0% |
| !!! | ACATTAATTTTGGTTATCAG+TGG | + | chr1_3:70070041-70070060 | Msa0137560:intron | 25.0% |
| ! | ATCACGATTGCTAAAATAAA+AGG | - | chr1_3:70070418-70070437 | None:intergenic | 25.0% |
| ! | ATGATGTGTAAAAAACTACA+AGG | + | chr1_3:70070487-70070506 | Msa0137560:intron | 25.0% |
| !!! | GAAGATTAGTTTAAAAAGGA+TGG | + | chr1_3:70070524-70070543 | Msa0137560:intron | 25.0% |
| ! | CTTTGCTTAAAAATCAATGA+TGG | - | chr1_3:70070577-70070596 | None:intergenic | 25.0% |
| !!! | CATCATTGATTTTTAAGCAA+AGG | + | chr1_3:70070575-70070594 | Msa0137560:intron | 25.0% |
| ! | TGTAATTTCTTTGACATCTA+AGG | + | chr1_3:70071005-70071024 | Msa0137560:intron | 25.0% |
| !! | GATTATTTCCAATATCGATT+TGG | - | chr1_3:70071178-70071197 | None:intergenic | 25.0% |
| ! | TTTCCCATATAAATTGATCT+TGG | - | chr1_3:70071200-70071219 | None:intergenic | 25.0% |
| ! | GATCAATTTATATGGGAAAA+TGG | + | chr1_3:70071201-70071220 | Msa0137560:intron | 25.0% |
| !! | ACTATCTATCATTTGTTGAA+TGG | + | chr1_3:70071225-70071244 | Msa0137560:intron | 25.0% |
| !!! | TTGGTTGGTAATTTAATTTG+TGG | + | chr1_3:70071451-70071470 | Msa0137560:intron | 25.0% |
| ! | GAACAAATGCATAGTTAATT+TGG | - | chr1_3:70071518-70071537 | None:intergenic | 25.0% |
| !! | GCATTTGTTCTTTCTTTTAT+AGG | + | chr1_3:70071528-70071547 | Msa0137560:intron | 25.0% |
| !!! | GCTTAAGTTTTATTCTTCTT+TGG | - | chr1_3:70072076-70072095 | None:intergenic | 25.0% |
| ! | ACAAGTTAAACTAACAGAAA+TGG | - | chr1_3:70072246-70072265 | None:intergenic | 25.0% |
| !!! | TTAGTTTAACTTGTAGTAGT+AGG | + | chr1_3:70072252-70072271 | Msa0137560:three_prime_UTR | 25.0% |
| !!! | AATGGTTTTGTGATCCAAAT+CGG | - | chr1_3:70069268-70069287 | None:intergenic | 30.0% |
| GATATTGGATTATGGTGTAA+GGG | - | chr1_3:70069299-70069318 | None:intergenic | 30.0% | |
| TGATATTGGATTATGGTGTA+AGG | - | chr1_3:70069300-70069319 | None:intergenic | 30.0% | |
| AAGAAAAAGTCAACCATTGA+AGG | + | chr1_3:70069362-70069381 | Msa0137560:CDS | 30.0% | |
| TTGTTTGTGTTTCATTGGAA+TGG | + | chr1_3:70069578-70069597 | Msa0137560:intron | 30.0% | |
| GTTCAAATAAGTCGATCTAA+AGG | - | chr1_3:70069777-70069796 | None:intergenic | 30.0% | |
| CATAACACATTTCACAGTTT+AGG | - | chr1_3:70070004-70070023 | None:intergenic | 30.0% | |
| !! | TTGTTTTTCTGTCATGGATA+TGG | + | chr1_3:70070142-70070161 | Msa0137560:CDS | 30.0% |
| CTAGAGAGTTATCAAATTTG+AGG | + | chr1_3:70070210-70070229 | Msa0137560:intron | 30.0% | |
| AGAGTTATCAAATTTGAGGA+TGG | + | chr1_3:70070214-70070233 | Msa0137560:intron | 30.0% | |
| ! | ATAATTGTTCAGGTATTGCA+AGG | + | chr1_3:70070250-70070269 | Msa0137560:intron | 30.0% |
| TCGACTAAATCATCAAAACT+TGG | - | chr1_3:70070357-70070376 | None:intergenic | 30.0% | |
| !! | GATTAGTTTAAAAAGGATGG+AGG | + | chr1_3:70070527-70070546 | Msa0137560:intron | 30.0% |
| GATTTGCCGCAATTTATATT+CGG | + | chr1_3:70070805-70070824 | Msa0137560:CDS | 30.0% | |
| ATTTATATTCGGACAGTCAA+TGG | + | chr1_3:70070816-70070835 | Msa0137560:CDS | 30.0% | |
| TTTATATTCGGACAGTCAAT+GGG | + | chr1_3:70070817-70070836 | Msa0137560:CDS | 30.0% | |
| ATTTGAAGGAACCAAATGAT+TGG | + | chr1_3:70070863-70070882 | Msa0137560:CDS | 30.0% | |
| TTTGAAGGAACCAAATGATT+GGG | + | chr1_3:70070864-70070883 | Msa0137560:CDS | 30.0% | |
| TCAAACTTGCAAAAGAATAC+TGG | - | chr1_3:70071070-70071089 | None:intergenic | 30.0% | |
| ! | CAAGTTTGAGATTCAATACT+TGG | + | chr1_3:70071081-70071100 | Msa0137560:intron | 30.0% |
| TCAAACAAGAACAACAAATC+AGG | - | chr1_3:70071288-70071307 | None:intergenic | 30.0% | |
| !! | TATGGAAATAGTTTTGCCTT+TGG | - | chr1_3:70071385-70071404 | None:intergenic | 30.0% |
| ATGCTTTCTCATAAAGAAAC+TGG | - | chr1_3:70071819-70071838 | None:intergenic | 30.0% | |
| AAGACACTAAAGATCTATGA+AGG | + | chr1_3:70071850-70071869 | Msa0137560:CDS | 30.0% | |
| ACAGAAGAAATTCTTTCATC+AGG | - | chr1_3:70071904-70071923 | None:intergenic | 30.0% | |
| TCAAAGTTCTTAAGTCACTT+GGG | - | chr1_3:70072098-70072117 | None:intergenic | 30.0% | |
| TTCAAAGTTCTTAAGTCACT+TGG | - | chr1_3:70072099-70072118 | None:intergenic | 30.0% | |
| ! | ATCTACATACTTCTAGAAAG+TGG | - | chr1_3:70072138-70072157 | None:intergenic | 30.0% |
| !! | TTTGTTAGTTTGTTAGAGTG+TGG | + | chr1_3:70072211-70072230 | Msa0137560:three_prime_UTR | 30.0% |
| AACTTGTAGTAGTAGGAAAT+TGG | + | chr1_3:70072259-70072278 | Msa0137560:three_prime_UTR | 30.0% | |
| GATTATGGTGTAAGGGTAAA+GGG | - | chr1_3:70069292-70069311 | None:intergenic | 35.0% | |
| ATCAAGGTTAAGAGAAGCTA+TGG | - | chr1_3:70069408-70069427 | None:intergenic | 35.0% | |
| TTGGTTATCAGTGGTATGAA+AGG | + | chr1_3:70070050-70070069 | Msa0137560:intron | 35.0% | |
| AGTGGTATGAAAGGAATTCA+AGG | + | chr1_3:70070059-70070078 | Msa0137560:intron | 35.0% | |
| GTGGTATGAAAGGAATTCAA+GGG | + | chr1_3:70070060-70070079 | Msa0137560:intron | 35.0% | |
| TGGTATGAAAGGAATTCAAG+GGG | + | chr1_3:70070061-70070080 | Msa0137560:CDS | 35.0% | |
| AAAAACAAAGCCCCTTTGAT+TGG | - | chr1_3:70070130-70070149 | None:intergenic | 35.0% | |
| ACTTGCACTTTCTTCTTTGA+AGG | + | chr1_3:70070169-70070188 | Msa0137560:CDS | 35.0% | |
| ! | ATTTGATAACTCTCTAGCTC+TGG | - | chr1_3:70070207-70070226 | None:intergenic | 35.0% |
| !!! | ATTTTAGCTGCTTCTGGATT+TGG | + | chr1_3:70070273-70070292 | Msa0137560:CDS | 35.0% |
| !! | TGGATTTGGTGTTTATGCAA+TGG | + | chr1_3:70070287-70070306 | Msa0137560:CDS | 35.0% |
| GGTTTATCTGAAGGATTACA+TGG | + | chr1_3:70070324-70070343 | Msa0137560:CDS | 35.0% | |
| ATAGATTGCAACAACGATCA+CGG | - | chr1_3:70070445-70070464 | None:intergenic | 35.0% | |
| GTCAATGTAAATGCATCGAA+AGG | - | chr1_3:70070766-70070785 | None:intergenic | 35.0% | |
| GACTGTCCGAATATAAATTG+CGG | - | chr1_3:70070814-70070833 | None:intergenic | 35.0% | |
| TGCTCTTAAAGCTCATTTGA+AGG | + | chr1_3:70070849-70070868 | Msa0137560:CDS | 35.0% | |
| AATGGACATACCTTACACAT+TGG | - | chr1_3:70070910-70070929 | None:intergenic | 35.0% | |
| ! | TGCAAAAGAATACTGGTTGA+GGG | - | chr1_3:70071063-70071082 | None:intergenic | 35.0% |
| ! | TTGCAAAAGAATACTGGTTG+AGG | - | chr1_3:70071064-70071083 | None:intergenic | 35.0% |
| ! | GCTTTTGTCCAAATCGATAT+TGG | + | chr1_3:70071167-70071186 | Msa0137560:intron | 35.0% |
| AGTTGTATTAGCACATCTGT+TGG | + | chr1_3:70071256-70071275 | Msa0137560:intron | 35.0% | |
| TTGATTGCCAAGATATCAGA+AGG | + | chr1_3:70071304-70071323 | Msa0137560:intron | 35.0% | |
| TAACATGCCTTCTGATATCT+TGG | - | chr1_3:70071314-70071333 | None:intergenic | 35.0% | |
| AACACCTTCAAGATTGTAGT+TGG | - | chr1_3:70071340-70071359 | None:intergenic | 35.0% | |
| ! | CTTGTCTAAAATGATGCCAA+AGG | + | chr1_3:70071366-70071385 | Msa0137560:CDS | 35.0% |
| GGCAAAACTATTTCCATACA+AGG | + | chr1_3:70071387-70071406 | Msa0137560:CDS | 35.0% | |
| AGTTCAGATAGATCCTTGTA+TGG | - | chr1_3:70071403-70071422 | None:intergenic | 35.0% | |
| ! | TGGTAGAGTGCAAATTTTCA+AGG | - | chr1_3:70071498-70071517 | None:intergenic | 35.0% |
| GATCAAACACGATTAAGAAC+TGG | + | chr1_3:70071577-70071596 | Msa0137560:CDS | 35.0% | |
| TCAAGATATTGAGTCACAGT+TGG | + | chr1_3:70071621-70071640 | Msa0137560:CDS | 35.0% | |
| TTTGCTCACTTTCTGTTACT+TGG | + | chr1_3:70071663-70071682 | Msa0137560:intron | 35.0% | |
| GCTCCATTATTGATACTTCA+TGG | + | chr1_3:70071760-70071779 | Msa0137560:CDS | 35.0% | |
| ! | GCTCCATGAAGTATCAATAA+TGG | - | chr1_3:70071766-70071785 | None:intergenic | 35.0% |
| ! | TAAAGAAACTGGCTCACTAA+TGG | - | chr1_3:70071808-70071827 | None:intergenic | 35.0% |
| ACACTAAAGATCTATGAAGG+AGG | + | chr1_3:70071853-70071872 | Msa0137560:CDS | 35.0% | |
| TCCATAATGACATCATCTCA+TGG | + | chr1_3:70071923-70071942 | Msa0137560:CDS | 35.0% | |
| ACCATGAGATGATGTCATTA+TGG | - | chr1_3:70071927-70071946 | None:intergenic | 35.0% | |
| TCATCTCATGGTTAGACATT+AGG | + | chr1_3:70071935-70071954 | Msa0137560:CDS | 35.0% | |
| TTAGGTGCTCAAGATAATTG+TGG | + | chr1_3:70071953-70071972 | Msa0137560:exon | 35.0% | |
| ! | ATTCTTCTTTGGCTCATCTT+GGG | - | chr1_3:70072065-70072084 | None:intergenic | 35.0% |
| ! | TATTCTTCTTTGGCTCATCT+TGG | - | chr1_3:70072066-70072085 | None:intergenic | 35.0% |
| AGAAAGTGGTGACTGATTAT+CGG | - | chr1_3:70072124-70072143 | None:intergenic | 35.0% | |
| GGATTATGGTGTAAGGGTAA+AGG | - | chr1_3:70069293-70069312 | None:intergenic | 40.0% | |
| TATAATAGACTGCACCTGCT+GGG | + | chr1_3:70069608-70069627 | Msa0137560:intron | 40.0% | |
| ! | CGATGATGATGAGTATAGCA+AGG | + | chr1_3:70069685-70069704 | Msa0137560:intron | 40.0% |
| GTCGCACAAATGTTTATGTC+AGG | - | chr1_3:70069806-70069825 | None:intergenic | 40.0% | |
| ! | TTCACAGTTTAGGGCATGTT+TGG | - | chr1_3:70069994-70070013 | None:intergenic | 40.0% |
| TGAAAGGAATTCAAGGGGAT+TGG | + | chr1_3:70070066-70070085 | Msa0137560:CDS | 40.0% | |
| ! | TGGAGATTTTCTGCAAAAGC+TGG | + | chr1_3:70070086-70070105 | Msa0137560:CDS | 40.0% |
| AACATGGCGTTCCAATCAAA+GGG | + | chr1_3:70070116-70070135 | Msa0137560:CDS | 40.0% | |
| ! | GTTTATGCAATGGATTTCCC+AGG | + | chr1_3:70070297-70070316 | Msa0137560:CDS | 40.0% |
| CTTCAGATAAACCGAAACCT+GGG | - | chr1_3:70070317-70070336 | None:intergenic | 40.0% | |
| AAGGAACCAAATGATTGGGA+CGG | + | chr1_3:70070868-70070887 | Msa0137560:CDS | 40.0% | |
| TCAAATGCAACACAGAGGAA+TGG | - | chr1_3:70070928-70070947 | None:intergenic | 40.0% | |
| CAACATCAAATGCAACACAG+AGG | - | chr1_3:70070933-70070952 | None:intergenic | 40.0% | |
| ACCTTCAAGATTGTAGTTGG+CGG | - | chr1_3:70071337-70071356 | None:intergenic | 40.0% | |
| !! | GAACTTATTTTCCGAGAACC+CGG | + | chr1_3:70071418-70071437 | Msa0137560:CDS | 40.0% |
| ! | ACCAACCAATTTTCTCTTGC+CGG | - | chr1_3:70071440-70071459 | None:intergenic | 40.0% |
| AACACGATTAAGAACTGGCA+TGG | + | chr1_3:70071582-70071601 | Msa0137560:CDS | 40.0% | |
| CTGTGACTCAATATCTTGAG+TGG | - | chr1_3:70071620-70071639 | None:intergenic | 40.0% | |
| TATTGAGTCACAGTTGGAGA+AGG | + | chr1_3:70071627-70071646 | Msa0137560:CDS | 40.0% | |
| ACTTCATGGAGCAGAAGATA+AGG | + | chr1_3:70071774-70071793 | Msa0137560:CDS | 40.0% | |
| ATCTATGAAGGAGGTTACCA+TGG | + | chr1_3:70071862-70071881 | Msa0137560:CDS | 40.0% | |
| TGGAGTTTGAACAGAGCATG+TGG | - | chr1_3:70069204-70069223 | None:intergenic | 45.0% | |
| CGTTGTCATAGATAGCTCCA+TGG | - | chr1_3:70069240-70069259 | None:intergenic | 45.0% | |
| ATGACAACGACACTCCGATT+TGG | + | chr1_3:70069251-70069270 | Msa0137560:CDS | 45.0% | |
| GGTGTAAGGGTAAAGGGAAA+TGG | - | chr1_3:70069286-70069305 | None:intergenic | 45.0% | |
| TGCATTCACTCTCAGTCTCA+GGG | - | chr1_3:70069342-70069361 | None:intergenic | 45.0% | |
| TTGCATTCACTCTCAGTCTC+AGG | - | chr1_3:70069343-70069362 | None:intergenic | 45.0% | |
| CTCATCGCTGATACCTTCAA+TGG | - | chr1_3:70069378-70069397 | None:intergenic | 45.0% | |
| ! | TACGAGAAGGTGCATGATCA+AGG | - | chr1_3:70069424-70069443 | None:intergenic | 45.0% |
| TGTCGAACATGTCTACGAGA+AGG | - | chr1_3:70069437-70069456 | None:intergenic | 45.0% | |
| TTGCTGATGCACATGAGTGA+AGG | - | chr1_3:70069462-70069481 | None:intergenic | 45.0% | |
| CTATAATAGACTGCACCTGC+TGG | + | chr1_3:70069607-70069626 | Msa0137560:intron | 45.0% | |
| TCTTGAGTTATGATCCCAGC+AGG | - | chr1_3:70069625-70069644 | None:intergenic | 45.0% | |
| TGAGTATAGCAAGGCATGCT+TGG | + | chr1_3:70069694-70069713 | Msa0137560:intron | 45.0% | |
| AAAAGCTGGATGCCAGAACA+TGG | + | chr1_3:70070100-70070119 | Msa0137560:CDS | 45.0% | |
| TTGATTGGAACGCCATGTTC+TGG | - | chr1_3:70070115-70070134 | None:intergenic | 45.0% | |
| GAACATGGCGTTCCAATCAA+AGG | + | chr1_3:70070115-70070134 | Msa0137560:CDS | 45.0% | |
| ACATGGCGTTCCAATCAAAG+GGG | + | chr1_3:70070117-70070136 | Msa0137560:CDS | 45.0% | |
| !!! | GGGGCTTTGTTTTTCTGTCA+TGG | + | chr1_3:70070136-70070155 | Msa0137560:CDS | 45.0% |
| !!! | GCAAGGATTTTAGCTGCTTC+TGG | + | chr1_3:70070267-70070286 | Msa0137560:CDS | 45.0% |
| ! | GCAATGGATTTCCCAGGTTT+CGG | + | chr1_3:70070303-70070322 | Msa0137560:CDS | 45.0% |
| CCTTCAGATAAACCGAAACC+TGG | - | chr1_3:70070318-70070337 | None:intergenic | 45.0% | |
| CCAGGTTTCGGTTTATCTGA+AGG | + | chr1_3:70070315-70070334 | Msa0137560:CDS | 45.0% | |
| TACATTGACAGCTAGACCAG+AGG | + | chr1_3:70070777-70070796 | Msa0137560:intron | 45.0% | |
| ATATTCGGACAGTCAATGGG+TGG | + | chr1_3:70070820-70070839 | Msa0137560:CDS | 45.0% | |
| ATGACTCCGTCCCAATCATT+TGG | - | chr1_3:70070877-70070896 | None:intergenic | 45.0% | |
| CCTTACACATTGGAGCTACA+AGG | - | chr1_3:70070900-70070919 | None:intergenic | 45.0% | |
| CCTTGTAGCTCCAATGTGTA+AGG | + | chr1_3:70070897-70070916 | Msa0137560:CDS | 45.0% | |
| ACCGCCAACTACAATCTTGA+AGG | + | chr1_3:70071333-70071352 | Msa0137560:CDS | 45.0% | |
| ! | ATTTTCTCTTGCCGGGTTCT+CGG | - | chr1_3:70071432-70071451 | None:intergenic | 45.0% |
| AGAACCCGGCAAGAGAAAAT+TGG | + | chr1_3:70071432-70071451 | Msa0137560:CDS | 45.0% | |
| ! | CCAACCAATTTTCTCTTGCC+GGG | - | chr1_3:70071439-70071458 | None:intergenic | 45.0% |
| ! | AGGAGGTTACCATGGCATTT+TGG | + | chr1_3:70071870-70071889 | Msa0137560:CDS | 45.0% |
| ! | GGTTACCATGGCATTTTGGA+AGG | + | chr1_3:70071874-70071893 | Msa0137560:CDS | 45.0% |
| GTTCACCTTCCAAAATGCCA+TGG | - | chr1_3:70071882-70071901 | None:intergenic | 45.0% | |
| GGTGCTCAAGATAATTGTGG+TGG | + | chr1_3:70071956-70071975 | Msa0137560:exon | 45.0% | |
| TCCACCAAGCTCAGTAACCA+TGG | + | chr1_3:70069220-70069239 | Msa0137560:exon | 50.0% | |
| TCCATGGTTACTGAGCTTGG+TGG | - | chr1_3:70069224-70069243 | None:intergenic | 50.0% | |
| AGCTCCATGGTTACTGAGCT+TGG | - | chr1_3:70069227-70069246 | None:intergenic | 50.0% | |
| CCCGGCAAGAGAAAATTGGT+TGG | + | chr1_3:70071436-70071455 | Msa0137560:intron | 50.0% | |
| TGACAGCTAGACCAGAGGTG+AGG | + | chr1_3:70070782-70070801 | Msa0137560:intron | 55.0% | |
| GACAGCTAGACCAGAGGTGA+GGG | + | chr1_3:70070783-70070802 | Msa0137560:intron | 55.0% | |
| TGCGGCAAATCCCTCACCTC+TGG | - | chr1_3:70070796-70070815 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 70069170 | 70072347 | 70069170 | ID=Msa0137560;Name=Msa0137560 |
| chr1_3 | mRNA | 70069170 | 70072347 | 70069170 | ID=Msa0137560-mRNA-1;Parent=Msa0137560;Name=Msa0137560-mRNA-1;_AED=0.08;_eAED=0.08;_QI=69|0.83|1|1|1|1|7|378|374 |
| chr1_3 | exon | 70069170 | 70069502 | 70069170 | ID=Msa0137560-mRNA-1:exon:24242;Parent=Msa0137560-mRNA-1 |
| chr1_3 | exon | 70070061 | 70070190 | 70070061 | ID=Msa0137560-mRNA-1:exon:24243;Parent=Msa0137560-mRNA-1 |
| chr1_3 | exon | 70070262 | 70070408 | 70070262 | ID=Msa0137560-mRNA-1:exon:24244;Parent=Msa0137560-mRNA-1 |
| chr1_3 | exon | 70070788 | 70070918 | 70070788 | ID=Msa0137560-mRNA-1:exon:24245;Parent=Msa0137560-mRNA-1 |
| chr1_3 | exon | 70071316 | 70071453 | 70071316 | ID=Msa0137560-mRNA-1:exon:24246;Parent=Msa0137560-mRNA-1 |
| chr1_3 | exon | 70071550 | 70071648 | 70071550 | ID=Msa0137560-mRNA-1:exon:24247;Parent=Msa0137560-mRNA-1 |
| chr1_3 | exon | 70071754 | 70072347 | 70071754 | ID=Msa0137560-mRNA-1:exon:24248;Parent=Msa0137560-mRNA-1 |
| chr1_3 | five_prime_UTR | 70069170 | 70069238 | 70069170 | ID=Msa0137560-mRNA-1:five_prime_utr;Parent=Msa0137560-mRNA-1 |
| chr1_3 | CDS | 70069239 | 70069502 | 70069239 | ID=Msa0137560-mRNA-1:cds;Parent=Msa0137560-mRNA-1 |
| chr1_3 | CDS | 70070061 | 70070190 | 70070061 | ID=Msa0137560-mRNA-1:cds;Parent=Msa0137560-mRNA-1 |
| chr1_3 | CDS | 70070262 | 70070408 | 70070262 | ID=Msa0137560-mRNA-1:cds;Parent=Msa0137560-mRNA-1 |
| chr1_3 | CDS | 70070788 | 70070918 | 70070788 | ID=Msa0137560-mRNA-1:cds;Parent=Msa0137560-mRNA-1 |
| chr1_3 | CDS | 70071316 | 70071453 | 70071316 | ID=Msa0137560-mRNA-1:cds;Parent=Msa0137560-mRNA-1 |
| chr1_3 | CDS | 70071550 | 70071648 | 70071550 | ID=Msa0137560-mRNA-1:cds;Parent=Msa0137560-mRNA-1 |
| chr1_3 | CDS | 70071754 | 70071969 | 70071754 | ID=Msa0137560-mRNA-1:cds;Parent=Msa0137560-mRNA-1 |
| chr1_3 | three_prime_UTR | 70071970 | 70072347 | 70071970 | ID=Msa0137560-mRNA-1:three_prime_utr;Parent=Msa0137560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
