Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559650 | XP_003608339.1 | 80.435 | 230 | 4 | 2 | 1 | 230 | 1 | 189 | 2.62e-123 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559650 | sp|Q9C5C8|MSRB2_ARATH | 64.607 | 178 | 31 | 1 | 52 | 229 | 54 | 199 | 8.64e-78 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559650 | G7JU02 | 80.435 | 230 | 4 | 2 | 1 | 230 | 1 | 189 | 1.25e-123 | 357 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0559650 | 0.864552 | 1.120394e-64 | -8.615850e-47 |
| Msa0002110 | Msa0559650 | 0.855602 | 5.651003e-62 | -8.615850e-47 |
| Msa0004180 | Msa0559650 | 0.827599 | 1.431399e-54 | -8.615850e-47 |
| Msa0011440 | Msa0559650 | 0.805891 | 1.072248e-49 | -8.615850e-47 |
| Msa0011450 | Msa0559650 | 0.854450 | 1.221404e-61 | -8.615850e-47 |
| Msa0017300 | Msa0559650 | 0.856538 | 3.007235e-62 | -8.615850e-47 |
| Msa0027020 | Msa0559650 | 0.831327 | 1.777373e-55 | -8.615850e-47 |
| Msa0033840 | Msa0559650 | 0.827268 | 1.718336e-54 | -8.615850e-47 |
| Msa0038650 | Msa0559650 | 0.806818 | 6.837805e-50 | -8.615850e-47 |
| Msa0046020 | Msa0559650 | 0.808818 | 2.568840e-50 | -8.615850e-47 |
| Msa0055940 | Msa0559650 | -0.810187 | 1.305438e-50 | -8.615850e-47 |
| Msa0064490 | Msa0559650 | 0.831069 | 2.056982e-55 | -8.615850e-47 |
| Msa0065670 | Msa0559650 | 0.855518 | 5.980461e-62 | -8.615850e-47 |
| Msa0075080 | Msa0559650 | 0.817644 | 2.963437e-52 | -8.615850e-47 |
| Msa0075160 | Msa0559650 | 0.809548 | 1.791817e-50 | -8.615850e-47 |
| Msa0075820 | Msa0559650 | 0.802080 | 6.647164e-49 | -8.615850e-47 |
| Msa0075990 | Msa0559650 | 0.801319 | 9.521858e-49 | -8.615850e-47 |
| Msa0076590 | Msa0559650 | 0.806828 | 6.806755e-50 | -8.615850e-47 |
| Msa0077570 | Msa0559650 | 0.848747 | 5.033390e-60 | -8.615850e-47 |
| Msa0081610 | Msa0559650 | 0.823438 | 1.385105e-53 | -8.615850e-47 |
| Msa0089700 | Msa0559650 | 0.821661 | 3.586102e-53 | -8.615850e-47 |
| Msa0093360 | Msa0559650 | 0.830972 | 2.172881e-55 | -8.615850e-47 |
| Msa0093950 | Msa0559650 | 0.826035 | 3.383152e-54 | -8.615850e-47 |
| Msa0094170 | Msa0559650 | 0.850266 | 1.898010e-60 | -8.615850e-47 |
| Msa0094710 | Msa0559650 | -0.820027 | 8.518252e-53 | -8.615850e-47 |
| Msa0095810 | Msa0559650 | 0.851899 | 6.569064e-61 | -8.615850e-47 |
| Msa0095890 | Msa0559650 | 0.834806 | 2.422388e-56 | -8.615850e-47 |
| Msa0102240 | Msa0559650 | -0.803257 | 3.801051e-49 | -8.615850e-47 |
| Msa0111110 | Msa0559650 | 0.860571 | 1.883122e-63 | -8.615850e-47 |
| Msa0112550 | Msa0559650 | 0.854257 | 1.388511e-61 | -8.615850e-47 |
| Msa0116780 | Msa0559650 | 0.808372 | 3.198543e-50 | -8.615850e-47 |
| Msa0120100 | Msa0559650 | 0.871394 | 7.069497e-67 | -8.615850e-47 |
| Msa0120160 | Msa0559650 | 0.881235 | 2.841772e-70 | -8.615850e-47 |
| Msa0122930 | Msa0559650 | 0.818776 | 1.643307e-52 | -8.615850e-47 |
| Msa0123000 | Msa0559650 | 0.807964 | 3.907843e-50 | -8.615850e-47 |
| Msa0126000 | Msa0559650 | 0.871503 | 6.505562e-67 | -8.615850e-47 |
| Msa0132000 | Msa0559650 | -0.803546 | 3.310623e-49 | -8.615850e-47 |
| Msa0133140 | Msa0559650 | 0.810947 | 8.947560e-51 | -8.615850e-47 |
| Msa0136870 | Msa0559650 | 0.802331 | 5.902853e-49 | -8.615850e-47 |
| Msa0138990 | Msa0559650 | 0.817539 | 3.129761e-52 | -8.615850e-47 |
| Msa0151510 | Msa0559650 | 0.841976 | 3.427127e-58 | -8.615850e-47 |
| Msa0158890 | Msa0559650 | 0.811476 | 6.870257e-51 | -8.615850e-47 |
| Msa0162170 | Msa0559650 | 0.821561 | 3.781097e-53 | -8.615850e-47 |
| Msa0167160 | Msa0559650 | 0.825063 | 5.750362e-54 | -8.615850e-47 |
| Msa0167500 | Msa0559650 | 0.814621 | 1.403581e-51 | -8.615850e-47 |
| Msa0167570 | Msa0559650 | 0.855687 | 5.337300e-62 | -8.615850e-47 |
| Msa0168410 | Msa0559650 | 0.827075 | 1.910918e-54 | -8.615850e-47 |
| Msa0168770 | Msa0559650 | 0.841691 | 4.074662e-58 | -8.615850e-47 |
| Msa0173950 | Msa0559650 | 0.814627 | 1.399310e-51 | -8.615850e-47 |
| Msa0177640 | Msa0559650 | 0.847591 | 1.049944e-59 | -8.615850e-47 |
| Msa0178840 | Msa0559650 | 0.811906 | 5.537080e-51 | -8.615850e-47 |
| Msa0182940 | Msa0559650 | 0.830913 | 2.246772e-55 | -8.615850e-47 |
| Msa0187590 | Msa0559650 | 0.876683 | 1.149171e-68 | -8.615850e-47 |
| Msa0189560 | Msa0559650 | 0.803792 | 2.944050e-49 | -8.615850e-47 |
| Msa0196580 | Msa0559650 | 0.812503 | 4.103210e-51 | -8.615850e-47 |
| Msa0198990 | Msa0559650 | -0.821328 | 4.281293e-53 | -8.615850e-47 |
| Msa0207250 | Msa0559650 | 0.806141 | 9.502503e-50 | -8.615850e-47 |
| Msa0211590 | Msa0559650 | 0.844976 | 5.414725e-59 | -8.615850e-47 |
| Msa0213620 | Msa0559650 | 0.815135 | 1.079381e-51 | -8.615850e-47 |
| Msa0220400 | Msa0559650 | 0.853159 | 2.873568e-61 | -8.615850e-47 |
| Msa0225190 | Msa0559650 | 0.885896 | 5.473016e-72 | -8.615850e-47 |
| Msa0225280 | Msa0559650 | 0.810825 | 9.509349e-51 | -8.615850e-47 |
| Msa0225790 | Msa0559650 | 0.865019 | 7.998032e-65 | -8.615850e-47 |
| Msa0232090 | Msa0559650 | -0.811493 | 6.809925e-51 | -8.615850e-47 |
| Msa0235290 | Msa0559650 | -0.805389 | 1.366993e-49 | -8.615850e-47 |
| Msa0368210 | Msa0559650 | 0.807758 | 4.323150e-50 | -8.615850e-47 |
| Msa0375330 | Msa0559650 | 0.852688 | 3.918412e-61 | -8.615850e-47 |
| Msa0377990 | Msa0559650 | 0.800607 | 1.331405e-48 | -8.615850e-47 |
| Msa0380400 | Msa0559650 | 0.852724 | 3.825456e-61 | -8.615850e-47 |
| Msa0380450 | Msa0559650 | 0.807263 | 5.505963e-50 | -8.615850e-47 |
| Msa0380470 | Msa0559650 | 0.813702 | 2.238977e-51 | -8.615850e-47 |
| Msa0382050 | Msa0559650 | 0.842470 | 2.536343e-58 | -8.615850e-47 |
| Msa0386230 | Msa0559650 | 0.820804 | 5.650526e-53 | -8.615850e-47 |
| Msa0397420 | Msa0559650 | 0.862014 | 6.839302e-64 | -8.615850e-47 |
| Msa0403470 | Msa0559650 | 0.824342 | 8.500986e-54 | -8.615850e-47 |
| Msa0417790 | Msa0559650 | 0.824413 | 8.181280e-54 | -8.615850e-47 |
| Msa0419150 | Msa0559650 | 0.804297 | 2.311605e-49 | -8.615850e-47 |
| Msa0420810 | Msa0559650 | 0.830328 | 3.123449e-55 | -8.615850e-47 |
| Msa0427600 | Msa0559650 | 0.837931 | 3.883805e-57 | -8.615850e-47 |
| Msa0428270 | Msa0559650 | 0.814259 | 1.687496e-51 | -8.615850e-47 |
| Msa0429990 | Msa0559650 | 0.828871 | 7.065640e-55 | -8.615850e-47 |
| Msa0431270 | Msa0559650 | 0.820064 | 8.355861e-53 | -8.615850e-47 |
| Msa0431550 | Msa0559650 | 0.836535 | 8.840004e-57 | -8.615850e-47 |
| Msa0432490 | Msa0559650 | 0.800700 | 1.274721e-48 | -8.615850e-47 |
| Msa0436660 | Msa0559650 | 0.831046 | 2.083400e-55 | -8.615850e-47 |
| Msa0437820 | Msa0559650 | 0.816422 | 5.577056e-52 | -8.615850e-47 |
| Msa0439090 | Msa0559650 | 0.806104 | 9.672637e-50 | -8.615850e-47 |
| Msa0439130 | Msa0559650 | 0.800818 | 1.205447e-48 | -8.615850e-47 |
| Msa0444770 | Msa0559650 | 0.830405 | 2.991274e-55 | -8.615850e-47 |
| Msa0446110 | Msa0559650 | 0.801422 | 9.070160e-49 | -8.615850e-47 |
| Msa0457560 | Msa0559650 | -0.807148 | 5.824237e-50 | -8.615850e-47 |
| Msa0461150 | Msa0559650 | 0.810022 | 1.416925e-50 | -8.615850e-47 |
| Msa0461620 | Msa0559650 | 0.823068 | 1.690235e-53 | -8.615850e-47 |
| Msa0467070 | Msa0559650 | 0.804822 | 1.796245e-49 | -8.615850e-47 |
| Msa0473740 | Msa0559650 | 0.804197 | 2.424543e-49 | -8.615850e-47 |
| Msa0474630 | Msa0559650 | 0.815293 | 9.956652e-52 | -8.615850e-47 |
| Msa0474660 | Msa0559650 | 0.841062 | 5.968309e-58 | -8.615850e-47 |
| Msa0476170 | Msa0559650 | 0.869726 | 2.495572e-66 | -8.615850e-47 |
| Msa0476560 | Msa0559650 | 0.806328 | 8.675855e-50 | -8.615850e-47 |
| Msa0476600 | Msa0559650 | 0.824055 | 9.930770e-54 | -8.615850e-47 |
| Msa0476890 | Msa0559650 | 0.843514 | 1.337545e-58 | -8.615850e-47 |
| Msa0480090 | Msa0559650 | 0.803615 | 3.202893e-49 | -8.615850e-47 |
| Msa0241750 | Msa0559650 | -0.829800 | 4.203007e-55 | -8.615850e-47 |
| Msa0253230 | Msa0559650 | 0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa0259450 | Msa0559650 | 0.812783 | 3.563376e-51 | -8.615850e-47 |
| Msa0259570 | Msa0559650 | 0.814361 | 1.602140e-51 | -8.615850e-47 |
| Msa0260580 | Msa0559650 | 0.858399 | 8.460076e-63 | -8.615850e-47 |
| Msa0260640 | Msa0559650 | 0.854801 | 9.662728e-62 | -8.615850e-47 |
| Msa0261350 | Msa0559650 | 0.850084 | 2.133632e-60 | -8.615850e-47 |
| Msa0261660 | Msa0559650 | 0.839439 | 1.583219e-57 | -8.615850e-47 |
| Msa0262350 | Msa0559650 | 0.857900 | 1.191194e-62 | -8.615850e-47 |
| Msa0266330 | Msa0559650 | 0.825475 | 4.595037e-54 | -8.615850e-47 |
| Msa0268440 | Msa0559650 | 0.803851 | 2.862284e-49 | -8.615850e-47 |
| Msa0268660 | Msa0559650 | 0.804104 | 2.534962e-49 | -8.615850e-47 |
| Msa0268870 | Msa0559650 | 0.800414 | 1.457482e-48 | -8.615850e-47 |
| Msa0275980 | Msa0559650 | 0.806730 | 7.135918e-50 | -8.615850e-47 |
| Msa0298820 | Msa0559650 | 0.805463 | 1.318852e-49 | -8.615850e-47 |
| Msa0299130 | Msa0559650 | 0.836097 | 1.142608e-56 | -8.615850e-47 |
| Msa0299530 | Msa0559650 | 0.883469 | 4.371556e-71 | -8.615850e-47 |
| Msa0300130 | Msa0559650 | 0.852050 | 5.952814e-61 | -8.615850e-47 |
| Msa0300840 | Msa0559650 | -0.817951 | 2.526869e-52 | -8.615850e-47 |
| Msa0305630 | Msa0559650 | 0.804900 | 1.730013e-49 | -8.615850e-47 |
| Msa0317820 | Msa0559650 | 0.816763 | 4.676627e-52 | -8.615850e-47 |
| Msa0340700 | Msa0559650 | 0.846924 | 1.599429e-59 | -8.615850e-47 |
| Msa0341950 | Msa0559650 | 0.825153 | 5.473560e-54 | -8.615850e-47 |
| Msa0490740 | Msa0559650 | 0.815189 | 1.050371e-51 | -8.615850e-47 |
| Msa0492330 | Msa0559650 | 0.834109 | 3.623626e-56 | -8.615850e-47 |
| Msa0492920 | Msa0559650 | 0.804726 | 1.880858e-49 | -8.615850e-47 |
| Msa0500580 | Msa0559650 | 0.821582 | 3.739212e-53 | -8.615850e-47 |
| Msa0506700 | Msa0559650 | 0.841915 | 3.555544e-58 | -8.615850e-47 |
| Msa0507960 | Msa0559650 | 0.804880 | 1.746871e-49 | -8.615850e-47 |
| Msa0512630 | Msa0559650 | -0.805230 | 1.475770e-49 | -8.615850e-47 |
| Msa0518150 | Msa0559650 | 0.812962 | 3.255239e-51 | -8.615850e-47 |
| Msa0519100 | Msa0559650 | 0.825000 | 5.950681e-54 | -8.615850e-47 |
| Msa0520550 | Msa0559650 | 0.808195 | 3.489854e-50 | -8.615850e-47 |
| Msa0523430 | Msa0559650 | 0.802054 | 6.730923e-49 | -8.615850e-47 |
| Msa0523490 | Msa0559650 | 0.859649 | 3.574890e-63 | -8.615850e-47 |
| Msa0537950 | Msa0559650 | -0.804319 | 2.286609e-49 | -8.615850e-47 |
| Msa0538190 | Msa0559650 | -0.812736 | 3.648069e-51 | -8.615850e-47 |
| Msa0542060 | Msa0559650 | 0.809206 | 2.122294e-50 | -8.615850e-47 |
| Msa0549700 | Msa0559650 | 0.801090 | 1.060668e-48 | -8.615850e-47 |
| Msa0550980 | Msa0559650 | 0.806518 | 7.910644e-50 | -8.615850e-47 |
| Msa0550990 | Msa0559650 | 0.859675 | 3.509974e-63 | -8.615850e-47 |
| Msa0557440 | Msa0559650 | 0.812450 | 4.212960e-51 | -8.615850e-47 |
| Msa0559450 | Msa0559650 | 0.851840 | 6.828075e-61 | -8.615850e-47 |
| Msa0559650 | Msa0561450 | 0.821433 | 4.048431e-53 | -8.615850e-47 |
| Msa0559650 | Msa0576020 | 0.829612 | 4.670279e-55 | -8.615850e-47 |
| Msa0559650 | Msa0576120 | 0.819719 | 1.002067e-52 | -8.615850e-47 |
| Msa0559650 | Msa0577660 | -0.813035 | 3.138122e-51 | -8.615850e-47 |
| Msa0559650 | Msa0577750 | -0.806629 | 7.495860e-50 | -8.615850e-47 |
| Msa0559650 | Msa0579070 | 0.803413 | 3.528445e-49 | -8.615850e-47 |
| Msa0559650 | Msa0580890 | 0.813017 | 3.166960e-51 | -8.615850e-47 |
| Msa0559650 | Msa0583360 | 0.811532 | 6.678191e-51 | -8.615850e-47 |
| Msa0559650 | Msa0587120 | -0.806108 | 9.654520e-50 | -8.615850e-47 |
| Msa0559650 | Msa0605210 | 0.807911 | 4.010299e-50 | -8.615850e-47 |
| Msa0559650 | Msa0606340 | 0.828070 | 1.102599e-54 | -8.615850e-47 |
| Msa0559650 | Msa0606350 | 0.852628 | 4.073831e-61 | -8.615850e-47 |
| Msa0559650 | Msa0606830 | -0.803775 | 2.968022e-49 | -8.615850e-47 |
| Msa0559650 | Msa0608720 | 0.805231 | 1.475236e-49 | -8.615850e-47 |
| Msa0559650 | Msa0610700 | 0.804881 | 1.745812e-49 | -8.615850e-47 |
| Msa0559650 | Msa0622450 | 0.809622 | 1.727830e-50 | -8.615850e-47 |
| Msa0559650 | Msa0630770 | 0.803549 | 3.306644e-49 | -8.615850e-47 |
| Msa0559650 | Msa0645800 | 0.810091 | 1.369563e-50 | -8.615850e-47 |
| Msa0559650 | Msa0646410 | 0.808073 | 3.705326e-50 | -8.615850e-47 |
| Msa0559650 | Msa0649160 | 0.834536 | 2.831466e-56 | -8.615850e-47 |
| Msa0559650 | Msa0654410 | 0.965051 | 4.169568e-124 | -8.615850e-47 |
| Msa0559650 | Msa0654490 | 0.958896 | 7.533419e-117 | -8.615850e-47 |
| Msa0559650 | Msa0654850 | 0.827267 | 1.719530e-54 | -8.615850e-47 |
| Msa0559650 | Msa0661540 | 0.805061 | 1.600815e-49 | -8.615850e-47 |
| Msa0559650 | Msa0667670 | 0.800159 | 1.642199e-48 | -8.615850e-47 |
| Msa0559650 | Msa0673620 | 0.814507 | 1.487283e-51 | -8.615850e-47 |
| Msa0559650 | Msa0685110 | 0.810499 | 1.118453e-50 | -8.615850e-47 |
| Msa0559650 | Msa0685500 | 0.807538 | 4.812966e-50 | -8.615850e-47 |
| Msa0559650 | Msa0695250 | 0.829265 | 5.668761e-55 | -8.615850e-47 |
| Msa0559650 | Msa0698510 | 0.806656 | 7.400098e-50 | -8.615850e-47 |
| Msa0559650 | Msa0698680 | 0.800593 | 1.340288e-48 | -8.615850e-47 |
| Msa0559650 | Msa0699200 | 0.809180 | 2.149616e-50 | -8.615850e-47 |
| Msa0559650 | Msa0713570 | 0.823196 | 1.577510e-53 | -8.615850e-47 |
| Msa0559650 | Msa0727860 | -0.812769 | 3.588278e-51 | -8.615850e-47 |
| Msa0559650 | Msa0733010 | -0.808143 | 3.579376e-50 | -8.615850e-47 |
| Msa0559650 | Msa0734250 | -0.826823 | 2.195506e-54 | -8.615850e-47 |
| Msa0559650 | Msa0739820 | 0.820794 | 5.681784e-53 | -8.615850e-47 |
| Msa0559650 | Msa0744010 | 0.821082 | 4.878859e-53 | -8.615850e-47 |
| Msa0559650 | Msa0750200 | 0.809860 | 1.535751e-50 | -8.615850e-47 |
| Msa0559650 | Msa0751490 | 0.848093 | 7.635019e-60 | -8.615850e-47 |
| Msa0559650 | Msa0753590 | 0.858592 | 7.411532e-63 | -8.615850e-47 |
| Msa0559650 | Msa0755550 | 0.829565 | 4.793749e-55 | -8.615850e-47 |
| Msa0559650 | Msa0769300 | -0.827290 | 1.697473e-54 | -8.615850e-47 |
| Msa0559650 | Msa0770340 | -0.804065 | 2.583095e-49 | -8.615850e-47 |
| Msa0559650 | Msa0773990 | -0.836725 | 7.906661e-57 | -8.615850e-47 |
| Msa0559650 | Msa0784780 | 0.811749 | 5.991795e-51 | -8.615850e-47 |
| Msa0559650 | Msa0788450 | 0.838376 | 2.982824e-57 | -8.615850e-47 |
| Msa0559650 | Msa0790650 | 0.821951 | 3.073215e-53 | -8.615850e-47 |
| Msa0559650 | Msa0793130 | 0.802324 | 5.920504e-49 | -8.615850e-47 |
| Msa0559650 | Msa0793660 | 0.830728 | 2.494285e-55 | -8.615850e-47 |
| Msa0559650 | Msa0794900 | 0.808631 | 2.817371e-50 | -8.615850e-47 |
| Msa0559650 | Msa0820130 | 0.821539 | 3.827255e-53 | -8.615850e-47 |
| Msa0559650 | Msa0822320 | 0.808370 | 3.202102e-50 | -8.615850e-47 |
| Msa0559650 | Msa0825360 | 0.822519 | 2.268832e-53 | -8.615850e-47 |
| Msa0559650 | Msa0825570 | 0.838928 | 2.148420e-57 | -8.615850e-47 |
| Msa0559650 | Msa0826210 | -0.806428 | 8.265836e-50 | -8.615850e-47 |
| Msa0559650 | Msa0826540 | 0.842366 | 2.701407e-58 | -8.615850e-47 |
| Msa0559650 | Msa0829210 | 0.841534 | 4.484065e-58 | -8.615850e-47 |
| Msa0559650 | Msa0829250 | 0.813731 | 2.206116e-51 | -8.615850e-47 |
| Msa0559650 | Msa0833200 | 0.834666 | 2.626730e-56 | -8.615850e-47 |
| Msa0559650 | Msa0835050 | 0.817893 | 2.604171e-52 | -8.615850e-47 |
| Msa0559650 | Msa0838120 | 0.800093 | 1.694337e-48 | -8.615850e-47 |
| Msa0559650 | Msa0853200 | 0.874042 | 9.199860e-68 | -8.615850e-47 |
| Msa0559650 | Msa0858250 | 0.822334 | 2.504149e-53 | -8.615850e-47 |
| Msa0559650 | Msa0862620 | -0.817259 | 3.617779e-52 | -8.615850e-47 |
| Msa0559650 | Msa0864820 | 0.862297 | 5.598410e-64 | -8.615850e-47 |
| Msa0559650 | Msa0868500 | 0.835365 | 1.750762e-56 | -8.615850e-47 |
| Msa0559650 | Msa0868510 | 0.840995 | 6.214117e-58 | -8.615850e-47 |
| Msa0559650 | Msa0868520 | 0.822901 | 1.848001e-53 | -8.615850e-47 |
| Msa0559650 | Msa0869420 | 0.851009 | 1.173070e-60 | -8.615850e-47 |
| Msa0559650 | Msa0870460 | 0.817216 | 3.699123e-52 | -8.615850e-47 |
| Msa0559650 | Msa0881010 | -0.801824 | 7.503239e-49 | -8.615850e-47 |
| Msa0559650 | Msa0881040 | -0.828629 | 8.084399e-55 | -8.615850e-47 |
| Msa0559650 | Msa0882480 | 0.872302 | 3.530413e-67 | -8.615850e-47 |
| Msa0559650 | Msa0888520 | 0.809791 | 1.589359e-50 | -8.615850e-47 |
| Msa0559650 | Msa0903590 | 0.800551 | 1.366691e-48 | -8.615850e-47 |
| Msa0559650 | Msa0919120 | 0.803202 | 3.900670e-49 | -8.615850e-47 |
| Msa0559650 | Msa0935840 | 0.849195 | 3.778458e-60 | -8.615850e-47 |
| Msa0559650 | Msa0941420 | 0.813501 | 2.479387e-51 | -8.615850e-47 |
| Msa0559650 | Msa0945160 | 0.831826 | 1.339377e-55 | -8.615850e-47 |
| Msa0559650 | Msa0958960 | 0.819831 | 9.446813e-53 | -8.615850e-47 |
| Msa0559650 | Msa0960880 | 0.810094 | 1.367359e-50 | -8.615850e-47 |
| Msa0559650 | Msa0964400 | 0.830417 | 2.972247e-55 | -8.615850e-47 |
| Msa0559650 | Msa0968060 | 0.809907 | 1.500508e-50 | -8.615850e-47 |
| Msa0559650 | Msa0968470 | 0.825190 | 5.365828e-54 | -8.615850e-47 |
| Msa0559650 | Msa0971690 | 0.844555 | 7.032245e-59 | -8.615850e-47 |
| Msa0559650 | Msa0973010 | 0.816438 | 5.530192e-52 | -8.615850e-47 |
| Msa0559650 | Msa0974470 | 0.819586 | 1.074339e-52 | -8.615850e-47 |
| Msa0559650 | Msa0978540 | 0.829313 | 5.519149e-55 | -8.615850e-47 |
| Msa0559650 | Msa0978550 | 0.839978 | 1.146237e-57 | -8.615850e-47 |
| Msa0559650 | Msa0978560 | 0.815780 | 7.755461e-52 | -8.615850e-47 |
| Msa0559650 | Msa0984230 | 0.801347 | 9.398280e-49 | -8.615850e-47 |
| Msa0559650 | Msa1002550 | 0.842670 | 2.244176e-58 | -8.615850e-47 |
| Msa0559650 | Msa1011250 | -0.822054 | 2.908479e-53 | -8.615850e-47 |
| Msa0559650 | Msa1023210 | -0.815575 | 8.618828e-52 | -8.615850e-47 |
| Msa0559650 | Msa1028890 | 0.821011 | 5.064787e-53 | -8.615850e-47 |
| Msa0559650 | Msa1031190 | 0.839405 | 1.615743e-57 | -8.615850e-47 |
| Msa0559650 | Msa1037440 | 0.823055 | 1.701706e-53 | -8.615850e-47 |
| Msa0559650 | Msa1045750 | 0.818810 | 1.614355e-52 | -8.615850e-47 |
| Msa0559650 | Msa1058550 | 0.818109 | 2.326409e-52 | -8.615850e-47 |
| Msa0559650 | Msa1065470 | -0.802787 | 4.753931e-49 | -8.615850e-47 |
| Msa0559650 | Msa1068010 | 0.811133 | 8.152985e-51 | -8.615850e-47 |
| Msa0559650 | Msa1070370 | 0.837184 | 6.038383e-57 | -8.615850e-47 |
| Msa0559650 | Msa1071180 | 0.842530 | 2.444388e-58 | -8.615850e-47 |
| Msa0559650 | Msa1080610 | 0.812190 | 4.802966e-51 | -8.615850e-47 |
| Msa0559650 | Msa1080680 | 0.810855 | 9.367187e-51 | -8.615850e-47 |
| Msa0559650 | Msa1086490 | 0.809535 | 1.803715e-50 | -8.615850e-47 |
| Msa0559650 | Msa1086670 | 0.813946 | 1.977999e-51 | -8.615850e-47 |
| Msa0559650 | Msa1086850 | 0.801720 | 7.883098e-49 | -8.615850e-47 |
| Msa0559650 | Msa1091400 | 0.846094 | 2.695830e-59 | -8.615850e-47 |
| Msa0559650 | Msa1091460 | 0.854919 | 8.929499e-62 | -8.615850e-47 |
| Msa0559650 | Msa1106590 | -0.801257 | 9.806654e-49 | -8.615850e-47 |
| Msa0559650 | Msa1106730 | 0.805450 | 1.326896e-49 | -8.615850e-47 |
| Msa0559650 | Msa1116970 | -0.804598 | 2.000635e-49 | -8.615850e-47 |
| Msa0559650 | Msa1119420 | 0.838521 | 2.736925e-57 | -8.615850e-47 |
| Msa0559650 | Msa1121920 | 0.829670 | 4.521152e-55 | -8.615850e-47 |
| Msa0559650 | Msa1124460 | 0.824046 | 9.976874e-54 | -8.615850e-47 |
| Msa0559650 | Msa1124530 | 0.800525 | 1.383764e-48 | -8.615850e-47 |
| Msa0559650 | Msa1126320 | 0.825302 | 5.048117e-54 | -8.615850e-47 |
| Msa0559650 | Msa1128610 | 0.810085 | 1.373353e-50 | -8.615850e-47 |
| Msa0559650 | Msa1129300 | 0.859772 | 3.281768e-63 | -8.615850e-47 |
| Msa0559650 | Msa1130060 | -0.833599 | 4.861525e-56 | -8.615850e-47 |
| Msa0559650 | Msa1130150 | 0.833626 | 4.787577e-56 | -8.615850e-47 |
| Msa0559650 | Msa1134800 | 0.802055 | 6.726662e-49 | -8.615850e-47 |
| Msa0559650 | Msa1134840 | 0.803413 | 3.528227e-49 | -8.615850e-47 |
| Msa0559650 | Msa1137210 | -0.802781 | 4.765893e-49 | -8.615850e-47 |
| Msa0559650 | Msa1155170 | 0.806668 | 7.354923e-50 | -8.615850e-47 |
| Msa0559650 | Msa1156100 | 0.811678 | 6.207447e-51 | -8.615850e-47 |
| Msa0559650 | Msa1156120 | 0.815419 | 9.334831e-52 | -8.615850e-47 |
| Msa0559650 | Msa1158180 | 0.838947 | 2.124365e-57 | -8.615850e-47 |
| Msa0559650 | Msa1167150 | 0.814051 | 1.875508e-51 | -8.615850e-47 |
| Msa0559650 | Msa1190100 | 0.803750 | 3.003136e-49 | -8.615850e-47 |
| Msa0559650 | Msa1197740 | 0.825618 | 4.248843e-54 | -8.615850e-47 |
| Msa0559650 | Msa1199700 | 0.804272 | 2.339696e-49 | -8.615850e-47 |
| Msa0559650 | Msa1203320 | 0.805008 | 1.642121e-49 | -8.615850e-47 |
| Msa0559650 | Msa1208450 | 0.848364 | 6.425326e-60 | -8.615850e-47 |
| Msa0559650 | Msa1208990 | -0.820200 | 7.777558e-53 | -8.615850e-47 |
| Msa0559650 | Msa1209870 | 0.820991 | 5.119184e-53 | -8.615850e-47 |
| Msa0559650 | Msa1212150 | 0.800658 | 1.299698e-48 | -8.615850e-47 |
| Msa0559650 | Msa1225860 | 0.814121 | 1.810645e-51 | -8.615850e-47 |
| Msa0559650 | Msa1228260 | 0.809653 | 1.701122e-50 | -8.615850e-47 |
| Msa0559650 | Msa1235620 | 0.820828 | 5.579377e-53 | -8.615850e-47 |
| Msa0559650 | Msa1236110 | 0.800620 | 1.322964e-48 | -8.615850e-47 |
| Msa0559650 | Msa1236120 | 0.814323 | 1.633113e-51 | -8.615850e-47 |
| Msa0559650 | Msa1238660 | -0.800566 | 1.357006e-48 | -8.615850e-47 |
| Msa0559650 | Msa1247200 | 0.821136 | 4.740685e-53 | -8.615850e-47 |
| Msa0559650 | Msa1251440 | 0.831842 | 1.326973e-55 | -8.615850e-47 |
| Msa0559650 | Msa1266750 | 0.828255 | 9.950865e-55 | -8.615850e-47 |
| Msa0559650 | Msa1267340 | 0.801981 | 6.967253e-49 | -8.615850e-47 |
| Msa0559650 | Msa1271220 | 0.810314 | 1.225641e-50 | -8.615850e-47 |
| Msa0559650 | Msa1287100 | 0.828280 | 9.814444e-55 | -8.615850e-47 |
| Msa0559650 | Msa1295480 | 0.831957 | 1.243270e-55 | -8.615850e-47 |
| Msa0559650 | Msa1298390 | 0.824922 | 6.208675e-54 | -8.615850e-47 |
| Msa0559650 | Msa1303690 | 0.843280 | 1.543600e-58 | -8.615850e-47 |
| Msa0559650 | Msa1308430 | 0.801271 | 9.740836e-49 | -8.615850e-47 |
| Msa0559650 | Msa1325410 | 0.825964 | 3.516257e-54 | -8.615850e-47 |
| Msa0559650 | Msa1325560 | 0.840728 | 7.301485e-58 | -8.615850e-47 |
| Msa0559650 | Msa1330080 | 0.811838 | 5.729152e-51 | -8.615850e-47 |
| Msa0559650 | Msa1341710 | 0.815197 | 1.045619e-51 | -8.615850e-47 |
| Msa0559650 | Msa1341850 | 0.800276 | 1.554699e-48 | -8.615850e-47 |
| Msa0559650 | Msa1348170 | 0.848103 | 7.584532e-60 | -8.615850e-47 |
| Msa0559650 | Msa1350590 | 0.808540 | 2.945836e-50 | -8.615850e-47 |
| Msa0559650 | Msa1356600 | 0.850486 | 1.646062e-60 | -8.615850e-47 |
| Msa0559650 | Msa1361670 | 0.808448 | 3.081993e-50 | -8.615850e-47 |
| Msa0559650 | Msa1363170 | 0.841748 | 3.937398e-58 | -8.615850e-47 |
| Msa0559650 | Msa1363820 | 0.827152 | 1.831705e-54 | -8.615850e-47 |
| Msa0559650 | Msa1372460 | 0.803367 | 3.605596e-49 | -8.615850e-47 |
| Msa0559650 | Msa1373420 | 0.805671 | 1.192877e-49 | -8.615850e-47 |
| Msa0559650 | Msa1375610 | 0.867112 | 1.739410e-65 | -8.615850e-47 |
| Msa0559650 | Msa1375650 | 0.804960 | 1.680399e-49 | -8.615850e-47 |
| Msa0559650 | Msa1376550 | 0.859979 | 2.843486e-63 | -8.615850e-47 |
| Msa0559650 | Msa1379020 | -0.810588 | 1.069615e-50 | -8.615850e-47 |
| Msa0559650 | Msa1386910 | 0.804971 | 1.672268e-49 | -8.615850e-47 |
| Msa0559650 | Msa1387450 | 0.802392 | 5.732596e-49 | -8.615850e-47 |
| Msa0559650 | Msa1395430 | 0.806457 | 8.151348e-50 | -8.615850e-47 |
| Msa0559650 | Msa1407880 | -0.828809 | 7.311260e-55 | -8.615850e-47 |
| Msa0559650 | Msa1408110 | -0.809847 | 1.545364e-50 | -8.615850e-47 |
| Msa0559650 | Msa1408230 | 0.817910 | 2.580325e-52 | -8.615850e-47 |
| Msa0559650 | Msa1410480 | 0.805530 | 1.277018e-49 | -8.615850e-47 |
| Msa0559650 | Msa1412330 | 0.835269 | 1.850983e-56 | -8.615850e-47 |
| Msa0559650 | Msa1415510 | 0.826283 | 2.953282e-54 | -8.615850e-47 |
| Msa0559650 | Msa1423560 | 0.835342 | 1.774741e-56 | -8.615850e-47 |
| Msa0559650 | Msa1431510 | 0.810823 | 9.515319e-51 | -8.615850e-47 |
| Msa0559650 | Msa1439000 | 0.803311 | 3.704210e-49 | -8.615850e-47 |
| Msa0559650 | Msa1440140 | 0.839440 | 1.582219e-57 | -8.615850e-47 |
| Msa0559650 | Msa1444130 | 0.824844 | 6.477718e-54 | -8.615850e-47 |
| Msa0559650 | Msa1444690 | 0.816490 | 5.384925e-52 | -8.615850e-47 |
| Msa0559650 | Msa1444770 | 0.815118 | 1.089206e-51 | -8.615850e-47 |
| Msa0559650 | Msa1462700 | 0.830874 | 2.296862e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559650 | MtrunA17_Chr4g0049401 | 80.435 | 230 | 4 | 2 | 1 | 230 | 1 | 189 | 2.41e-127 | 357 |
| Msa0559650 | MtrunA17_Chr2g0286921 | 63.095 | 168 | 30 | 1 | 63 | 230 | 30 | 165 | 1.94e-73 | 220 |
| Msa0559650 | MtrunA17_Chr2g0286931 | 60.241 | 166 | 33 | 2 | 65 | 230 | 2 | 134 | 4.83e-65 | 198 |
| Msa0559650 | MtrunA17_Chr2g0286901 | 61.069 | 131 | 48 | 1 | 100 | 230 | 26 | 153 | 6.45e-55 | 173 |
| Msa0559650 | MtrunA17_Chr8g0359081 | 37.580 | 157 | 61 | 4 | 74 | 227 | 88 | 210 | 8.34e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0559650 | AT4G21860.4 | 64.607 | 178 | 31 | 1 | 52 | 229 | 54 | 199 | 8.78e-79 | 235 |
| Msa0559650 | AT4G21860.1 | 64.607 | 178 | 31 | 1 | 52 | 229 | 54 | 199 | 8.78e-79 | 235 |
| Msa0559650 | AT4G21860.3 | 64.607 | 178 | 31 | 1 | 52 | 229 | 54 | 199 | 8.78e-79 | 235 |
| Msa0559650 | AT4G04800.1 | 62.428 | 173 | 33 | 1 | 58 | 230 | 34 | 174 | 8.19e-73 | 219 |
| Msa0559650 | AT4G04830.1 | 62.651 | 166 | 30 | 1 | 65 | 230 | 2 | 135 | 7.74e-71 | 213 |
| Msa0559650 | AT4G04810.1 | 61.006 | 159 | 30 | 1 | 71 | 229 | 8 | 134 | 1.72e-65 | 199 |
| Msa0559650 | AT4G21850.1 | 55.294 | 170 | 44 | 1 | 61 | 230 | 5 | 142 | 6.11e-65 | 198 |
| Msa0559650 | AT4G21840.1 | 55.491 | 173 | 43 | 2 | 60 | 230 | 1 | 141 | 4.17e-64 | 196 |
| Msa0559650 | AT4G21830.2 | 53.801 | 171 | 47 | 1 | 60 | 230 | 1 | 139 | 2.17e-62 | 191 |
| Msa0559650 | AT4G04830.2 | 56.627 | 166 | 30 | 1 | 65 | 230 | 2 | 125 | 4.39e-61 | 188 |
| Msa0559650 | AT4G21830.1 | 55.556 | 162 | 40 | 1 | 69 | 230 | 13 | 142 | 2.39e-60 | 186 |
| Msa0559650 | AT4G04840.1 | 52.727 | 165 | 46 | 1 | 64 | 228 | 17 | 149 | 1.00e-59 | 185 |
| Msa0559650 | AT4G21860.2 | 54.688 | 128 | 26 | 1 | 52 | 179 | 54 | 149 | 2.80e-42 | 142 |
| Msa0559650 | AT4G04810.2 | 56.881 | 109 | 15 | 1 | 71 | 179 | 8 | 84 | 2.10e-36 | 124 |
| Msa0559650 | AT4G21850.2 | 48.739 | 119 | 29 | 1 | 61 | 179 | 5 | 91 | 2.21e-35 | 122 |
| Msa0559650 | AT1G53670.1 | 37.209 | 172 | 62 | 5 | 66 | 225 | 57 | 194 | 1.23e-27 | 104 |
| Msa0559650 | AT1G53670.2 | 34.302 | 172 | 60 | 6 | 66 | 225 | 57 | 187 | 2.40e-21 | 88.2 |
Find 112 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCATTCTTCCTCCGATTTC+TGG | 0.041403 | 4_1:+58834796 | None:intergenic |
| AACTATAGCAGTACTGAAAT+TGG | 0.198734 | 4_1:-58831557 | Msa0559650:three_prime_UTR |
| GCCTTCTATGAGGGTGTTCC+TGG | 0.207845 | 4_1:-58831920 | Msa0559650:CDS |
| ATCTACCGATTCTTCTTCTT+TGG | 0.211339 | 4_1:+58835073 | None:intergenic |
| AGTATCCACCGTTGTTTAAT+AGG | 0.234702 | 4_1:-58831313 | Msa0559650:three_prime_UTR |
| GGAGAATATGACAAATTCTT+TGG | 0.249999 | 4_1:-58832025 | Msa0559650:CDS |
| GGGTGGGGTGAAGGTGAATT+TGG | 0.259093 | 4_1:+58834911 | None:intergenic |
| TTATTTAAGCTACATAATTT+AGG | 0.262832 | 4_1:+58831512 | None:intergenic |
| AGAAGCAGAGGAGATTAAAT+TGG | 0.267545 | 4_1:-58832809 | Msa0559650:CDS |
| CATTTATTTCCATCCTCTCC+TGG | 0.283908 | 4_1:-58831472 | Msa0559650:three_prime_UTR |
| ATTTCTATCCTCATTCCATC+TGG | 0.297903 | 4_1:+58831760 | None:intergenic |
| CATCTCGGTCATGTATTTAA+AGG | 0.300561 | 4_1:-58831715 | Msa0559650:CDS |
| TTGTCATATTCTCCTGTTCC+AGG | 0.323050 | 4_1:+58832034 | None:intergenic |
| GAGAATATGACAAATTCTTT+GGG | 0.337073 | 4_1:-58832024 | Msa0559650:CDS |
| GTATCCACCGTTGTTTAATA+GGG | 0.342648 | 4_1:-58831312 | Msa0559650:three_prime_UTR |
| CATTGTAAATAACTAGGAAT+TGG | 0.348681 | 4_1:+58831624 | None:intergenic |
| TCAAACACAATTACACTCTA+TGG | 0.358437 | 4_1:+58831382 | None:intergenic |
| TATTGTTCCTGAGATTGTTT+TGG | 0.358920 | 4_1:-58831422 | Msa0559650:three_prime_UTR |
| GACACAATGGCGTTCGTTCG+TGG | 0.375923 | 4_1:+58831675 | None:intergenic |
| ATTTATTTCCATCCTCTCCT+GGG | 0.376995 | 4_1:-58831471 | Msa0559650:three_prime_UTR |
| TCTACAGTTGTGCAGGTTGC+GGG | 0.382998 | 4_1:-58831994 | Msa0559650:CDS |
| TCAACAACAAAATTCAATTC+CGG | 0.394212 | 4_1:-58831956 | Msa0559650:CDS |
| GAGAGAGTTGGGTGGGGTGA+AGG | 0.399554 | 4_1:+58834902 | None:intergenic |
| ACAAAATTCAATTCCGGTTG+TGG | 0.401214 | 4_1:-58831950 | Msa0559650:CDS |
| TCCTGGCTCGGTCCAGAAAT+CGG | 0.412246 | 4_1:-58834808 | Msa0559650:CDS |
| GTCTACAGTTGTGCAGGTTG+CGG | 0.417871 | 4_1:-58831995 | Msa0559650:CDS |
| TTTCATACCAAAACAATCTC+AGG | 0.421636 | 4_1:+58831415 | None:intergenic |
| TCCGATTTCTGGACCGAGCC+AGG | 0.422097 | 4_1:+58834807 | None:intergenic |
| GATGGAAATAAATGAACATC+TGG | 0.423523 | 4_1:+58831481 | None:intergenic |
| TCCAGGAACACCCTCATAGA+AGG | 0.426613 | 4_1:+58831919 | None:intergenic |
| CTCAGAATTCGAAACTGCTC+AGG | 0.426783 | 4_1:+58834759 | None:intergenic |
| TCTTCTTCTTTGGATATGAT+CGG | 0.426993 | 4_1:+58835083 | None:intergenic |
| GAGATGGTAGGGAGAGAGTT+GGG | 0.431155 | 4_1:+58834891 | None:intergenic |
| ATGTCTGCTGCACCTACTCC+TGG | 0.438702 | 4_1:-58834825 | Msa0559650:CDS |
| TTGGAGTTGAAGAGAAAGGT+AGG | 0.444884 | 4_1:+58834930 | None:intergenic |
| GTTAGAACAAATTGAGGAGA+TGG | 0.444988 | 4_1:+58834953 | None:intergenic |
| ACAAATTGAGGAGATGGGTT+TGG | 0.448728 | 4_1:+58834959 | None:intergenic |
| CTTCTTCTTTGGATATGATC+GGG | 0.451606 | 4_1:+58835084 | None:intergenic |
| TGCTGCACCTACTCCTGGCT+CGG | 0.454251 | 4_1:-58834820 | Msa0559650:CDS |
| ATCCTCATTCCATCTGGGTC+CGG | 0.459799 | 4_1:+58831766 | None:intergenic |
| GAAGGCTGGCCAGCCACAAC+CGG | 0.459992 | 4_1:+58831937 | None:intergenic |
| AAGAAGAAGAATCGGTAGAT+TGG | 0.462728 | 4_1:-58835070 | Msa0559650:five_prime_UTR |
| TTTCTATCCTCATTCCATCT+GGG | 0.463849 | 4_1:+58831761 | None:intergenic |
| GATGGGTTTGGTGACGTTGA+GGG | 0.465319 | 4_1:+58834971 | None:intergenic |
| AATTCAATTCCGGTTGTGGC+TGG | 0.467338 | 4_1:-58831946 | Msa0559650:CDS |
| TTATCAAGGTACCCTGGAAC+AGG | 0.467778 | 4_1:-58832046 | Msa0559650:intron |
| ACTATAGCAGTACTGAAATT+GGG | 0.471520 | 4_1:-58831556 | Msa0559650:three_prime_UTR |
| AAATAACATGTGCTGCTTGT+GGG | 0.473497 | 4_1:-58831741 | Msa0559650:CDS |
| GAGGGAGTCTACAGTTGTGC+AGG | 0.478161 | 4_1:-58832001 | Msa0559650:CDS |
| TCCAGAAATCGGAGGAAGAA+TGG | 0.490874 | 4_1:-58834797 | Msa0559650:CDS |
| AGGAGTAGGTGCAGCAGACA+TGG | 0.492353 | 4_1:+58834827 | None:intergenic |
| AACAATCTCAGGAACAATAC+AGG | 0.494058 | 4_1:+58831426 | None:intergenic |
| GGAGATGGTAGGGAGAGAGT+TGG | 0.494986 | 4_1:+58834890 | None:intergenic |
| GAATTTGGAGTTGAAGAGAA+AGG | 0.496737 | 4_1:+58834926 | None:intergenic |
| CATATCCAAAGAAGAAGAAT+CGG | 0.497690 | 4_1:-58835078 | Msa0559650:five_prime_UTR |
| TTAGAACAAATTGAGGAGAT+GGG | 0.498670 | 4_1:+58834954 | None:intergenic |
| GAAGCAGAGGAGATTAAATT+GGG | 0.498740 | 4_1:-58832808 | Msa0559650:CDS |
| TGGTAGGGAGAGAGTTGGGT+GGG | 0.499556 | 4_1:+58834895 | None:intergenic |
| TGGAGTTGAAGAGAAAGGTA+GGG | 0.502554 | 4_1:+58834931 | None:intergenic |
| ATGGTAGGGAGAGAGTTGGG+TGG | 0.512379 | 4_1:+58834894 | None:intergenic |
| CAGTCATCTTGTGTTCATCA+AGG | 0.513640 | 4_1:+58835024 | None:intergenic |
| GTAAATAACTAGGAATTGGC+TGG | 0.513940 | 4_1:+58831628 | None:intergenic |
| AGATGGGTTTGGTGACGTTG+AGG | 0.516062 | 4_1:+58834970 | None:intergenic |
| TTGTGGTTAAGGAGATGTCT+TGG | 0.516473 | 4_1:-58832758 | Msa0559650:CDS |
| ACACAATGGCGTTCGTTCGT+GGG | 0.518853 | 4_1:+58831676 | None:intergenic |
| TTTCGAATTCTGAGGCAGAA+AGG | 0.526917 | 4_1:-58834750 | Msa0559650:CDS |
| TTTGTTGTTGACTTGTAGAG+TGG | 0.535127 | 4_1:+58831968 | None:intergenic |
| ACCACGCTTCGGCTGACGAA+TGG | 0.535443 | 4_1:+58834869 | None:intergenic |
| TGGCTGGCCAGCCTTCTATG+AGG | 0.541767 | 4_1:-58831930 | Msa0559650:CDS |
| GGTAGGGTTAGAACAAATTG+AGG | 0.542736 | 4_1:+58834947 | None:intergenic |
| GGTCATGTATTTAAAGGTGA+AGG | 0.544366 | 4_1:-58831709 | Msa0559650:CDS |
| GTGACGTTGAGGGAAGAAAG+AGG | 0.544790 | 4_1:+58834981 | None:intergenic |
| TATGACAAATTCTTTGGGGA+GGG | 0.549093 | 4_1:-58832019 | Msa0559650:CDS |
| GGTAGGGAGAGAGTTGGGTG+GGG | 0.550203 | 4_1:+58834896 | None:intergenic |
| CCACCGCGAAAACCACGCTT+CGG | 0.552502 | 4_1:+58834858 | None:intergenic |
| TTTATTTCCATCCTCTCCTG+GGG | 0.552821 | 4_1:-58831470 | Msa0559650:three_prime_UTR |
| GGCTGGCCAGCCTTCTATGA+GGG | 0.553211 | 4_1:-58831929 | Msa0559650:CDS |
| ACGTGGCGGTTTATAGCTCC+AGG | 0.554221 | 4_1:+58831902 | None:intergenic |
| TGTCATATTCTCCTGTTCCA+GGG | 0.557941 | 4_1:+58832035 | None:intergenic |
| TGGCGTTCGTTCGTGGGTGT+CGG | 0.560916 | 4_1:+58831682 | None:intergenic |
| GGACTTCATTGTAAATAACT+AGG | 0.565168 | 4_1:+58831618 | None:intergenic |
| AGATGACTGTGAATATACTA+AGG | 0.565635 | 4_1:-58835010 | Msa0559650:CDS |
| TCCATTCGTCAGCCGAAGCG+TGG | 0.570636 | 4_1:-58834870 | Msa0559650:CDS |
| GGCTGACGAATGGAGATGGT+AGG | 0.572122 | 4_1:+58834879 | None:intergenic |
| CTTCGGCTGACGAATGGAGA+TGG | 0.572282 | 4_1:+58834875 | None:intergenic |
| GTGGCAGGGAGGAGAAGCAG+AGG | 0.575142 | 4_1:-58832821 | Msa0559650:intron |
| GTATTATTATCAAGGTACCC+TGG | 0.575400 | 4_1:-58832052 | Msa0559650:intron |
| TCAGAATTCGAAACTGCTCA+GGG | 0.577261 | 4_1:+58834760 | None:intergenic |
| GGAACACCCTCATAGAAGGC+TGG | 0.578117 | 4_1:+58831923 | None:intergenic |
| GAAATAACATGTGCTGCTTG+TGG | 0.579814 | 4_1:-58831742 | Msa0559650:CDS |
| AGCCGGACCCAGATGGAATG+AGG | 0.581127 | 4_1:-58831768 | Msa0559650:CDS |
| AATAACATGTGCTGCTTGTG+GGG | 0.586603 | 4_1:-58831740 | Msa0559650:CDS |
| ATATGACAAATTCTTTGGGG+AGG | 0.589338 | 4_1:-58832020 | Msa0559650:CDS |
| CACCACCAGCCGGACCCAGA+TGG | 0.591335 | 4_1:-58831775 | Msa0559650:intron |
| CTGAGCAGTTTCGAATTCTG+AGG | 0.595443 | 4_1:-58834758 | Msa0559650:CDS |
| GCTGACGAATGGAGATGGTA+GGG | 0.596509 | 4_1:+58834880 | None:intergenic |
| GAGGAGATTAAATTGGGCAG+AGG | 0.599908 | 4_1:-58832802 | Msa0559650:CDS |
| TATCCACCGTTGTTTAATAG+GGG | 0.600305 | 4_1:-58831311 | Msa0559650:three_prime_UTR |
| TTCTGGACCGAGCCAGGAGT+AGG | 0.614503 | 4_1:+58834813 | None:intergenic |
| GTGAAATGCTATTGACACAA+TGG | 0.617327 | 4_1:+58831662 | None:intergenic |
| TTATTTCCATCCTCTCCTGG+GGG | 0.622985 | 4_1:-58831469 | Msa0559650:three_prime_UTR |
| TGGGACTGTGGCTTATAGAG+TGG | 0.633677 | 4_1:-58831537 | Msa0559650:three_prime_UTR |
| CAGTACTGAAATTGGGACTG+TGG | 0.640736 | 4_1:-58831549 | Msa0559650:three_prime_UTR |
| TTACAATGAAGTCCACTCTG+TGG | 0.644295 | 4_1:-58831609 | Msa0559650:three_prime_UTR |
| TCCATGCCCCTATTAAACAA+CGG | 0.649561 | 4_1:+58831305 | None:intergenic |
| AGAATATGACAAATTCTTTG+GGG | 0.674356 | 4_1:-58832023 | Msa0559650:CDS |
| TGGCTCGGTCCAGAAATCGG+AGG | 0.678535 | 4_1:-58834805 | Msa0559650:CDS |
| ATAACATGTGCTGCTTGTGG+GGG | 0.687021 | 4_1:-58831739 | Msa0559650:CDS |
| CATATGATGTATCCACAGAG+TGG | 0.689508 | 4_1:+58831597 | None:intergenic |
| CAGAATTCGAAACTGCTCAG+GGG | 0.702893 | 4_1:+58834761 | None:intergenic |
| ATGCCCCTATTAAACAACGG+TGG | 0.711599 | 4_1:+58831308 | None:intergenic |
| GATACATCATATGATGCACA+TGG | 0.773043 | 4_1:-58831587 | Msa0559650:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTAATTGATTTTAAATTT+TGG | + | chr4_1:58832965-58832984 | None:intergenic | 10.0% |
| !!! | ATTAGTTTTTTTGAAATAAA+TGG | - | chr4_1:58833172-58833191 | Msa0559650:intron | 10.0% |
| !!! | TTAGTTTTTTTGAAATAAAT+GGG | - | chr4_1:58833173-58833192 | Msa0559650:intron | 10.0% |
| !! | ATATAATTAAATATGATAGT+GGG | + | chr4_1:58833978-58833997 | None:intergenic | 10.0% |
| !! | TATATAATTAAATATGATAG+TGG | + | chr4_1:58833979-58833998 | None:intergenic | 10.0% |
| !!! | TAGTTTTTTTGAAATAAATG+GGG | - | chr4_1:58833174-58833193 | Msa0559650:intron | 15.0% |
| !! | TTCTAACATGATAATATTAA+TGG | - | chr4_1:58833850-58833869 | Msa0559650:intron | 15.0% |
| !! | TCTAACATGATAATATTAAT+GGG | - | chr4_1:58833851-58833870 | Msa0559650:intron | 15.0% |
| !!! | TTTGTTTATAATTTTTTTGG+AGG | - | chr4_1:58834009-58834028 | Msa0559650:intron | 15.0% |
| !!! | ATGATTTTGTCATATTAAAT+TGG | - | chr4_1:58834075-58834094 | Msa0559650:intron | 15.0% |
| !! | TTATTTAAGCTACATAATTT+AGG | + | chr4_1:58834891-58834910 | None:intergenic | 15.0% |
| !! | TTTATTAAAAACAGCTTAAT+AGG | + | chr4_1:58835045-58835064 | None:intergenic | 15.0% |
| !! | TTTCATAGTACTATATTACA+TGG | + | chr4_1:58831888-58831907 | None:intergenic | 20.0% |
| !! | TTTATTATGGCTTAATGAAA+TGG | - | chr4_1:58831927-58831946 | Msa0559650:CDS | 20.0% |
| !!! | ACTTTAACTTCATTTTCTAA+AGG | - | chr4_1:58831994-58832013 | Msa0559650:CDS | 20.0% |
| !! | AAAAATTGTCCCAAAATATA+TGG | - | chr4_1:58832446-58832465 | Msa0559650:intron | 20.0% |
| !! | TATTAATTAGAGTGTAGAAT+TGG | + | chr4_1:58832510-58832529 | None:intergenic | 20.0% |
| !!! | ATCAAAAAGCTCAATTATTT+TGG | - | chr4_1:58832692-58832711 | Msa0559650:intron | 20.0% |
| !!! | TCAAAAAGCTCAATTATTTT+GGG | - | chr4_1:58832693-58832712 | Msa0559650:intron | 20.0% |
| !! | AATATATTAGCACAAGAAAT+GGG | + | chr4_1:58832782-58832801 | None:intergenic | 20.0% |
| !!! | CATATTTTGCAAATATACAT+GGG | - | chr4_1:58832861-58832880 | Msa0559650:intron | 20.0% |
| !!! | ATATTTTGCAAATATACATG+GGG | - | chr4_1:58832862-58832881 | Msa0559650:intron | 20.0% |
| !! | TATTATAACATTTAAGTCTG+TGG | - | chr4_1:58833238-58833257 | Msa0559650:intron | 20.0% |
| !! | AAATAATGTGATACAGAAAA+TGG | + | chr4_1:58833323-58833342 | None:intergenic | 20.0% |
| !!! | TATATCCTTTTCCATTTAAA+GGG | + | chr4_1:58833482-58833501 | None:intergenic | 20.0% |
| !! | ATTAACATATGGAGATATAA+GGG | - | chr4_1:58833506-58833525 | Msa0559650:intron | 20.0% |
| !! | TAAACATGCAATAAATTTGT+TGG | - | chr4_1:58833781-58833800 | Msa0559650:intron | 20.0% |
| !!! | CATATTAAATTGGTAATCTT+AGG | - | chr4_1:58834085-58834104 | Msa0559650:intron | 20.0% |
| !!! | TTTCACATGTTATATCTTTT+TGG | - | chr4_1:58834137-58834156 | Msa0559650:intron | 20.0% |
| !!! | ATGTTTTGGTATTATTATCA+AGG | - | chr4_1:58834340-58834359 | Msa0559650:intron | 20.0% |
| !!! | TGAAACACATAAATTTTATC+AGG | + | chr4_1:58834607-58834626 | None:intergenic | 20.0% |
| ! | TTGAGCTATTTATCCAAATA+GGG | - | chr4_1:58831830-58831849 | Msa0559650:intron | 25.0% |
| ! | ATATAGTACTATGAAAACCA+TGG | - | chr4_1:58831892-58831911 | Msa0559650:intron | 25.0% |
| !!! | GTAAGTGGTAAGTTTTATTA+TGG | - | chr4_1:58831914-58831933 | Msa0559650:CDS | 25.0% |
| ! | TTATTATCCACACACTAATA+TGG | - | chr4_1:58832189-58832208 | Msa0559650:intron | 25.0% |
| !! | ATTCGTGTTATAAGTTTTTG+AGG | + | chr4_1:58832296-58832315 | None:intergenic | 25.0% |
| ! | TTAGAAGTAATTTCAGAGAT+GGG | + | chr4_1:58832335-58832354 | None:intergenic | 25.0% |
| !! | ACAAAAGGCTCAATTATTTT+GGG | + | chr4_1:58832423-58832442 | None:intergenic | 25.0% |
| !! | AACAAAAGGCTCAATTATTT+TGG | + | chr4_1:58832424-58832443 | None:intergenic | 25.0% |
| !!! | GGGACAATTTTTTTAACAAA+AGG | + | chr4_1:58832438-58832457 | None:intergenic | 25.0% |
| ! | AAAGGTGATTAATATTGCAT+TGG | + | chr4_1:58832485-58832504 | None:intergenic | 25.0% |
| ! | GGTAAGAAAAAAATTCTGAA+TGG | + | chr4_1:58832761-58832780 | None:intergenic | 25.0% |
| ! | CAATATATTAGCACAAGAAA+TGG | + | chr4_1:58832783-58832802 | None:intergenic | 25.0% |
| !! | GCATATTTTGCAAATATACA+TGG | - | chr4_1:58832860-58832879 | Msa0559650:intron | 25.0% |
| ! | TCAATTAAGTACAAACACTA+TGG | - | chr4_1:58832975-58832994 | Msa0559650:intron | 25.0% |
| !! | TGATGTGACAATTATAGTTT+TGG | - | chr4_1:58833029-58833048 | Msa0559650:intron | 25.0% |
| !! | GATGTGACAATTATAGTTTT+GGG | - | chr4_1:58833030-58833049 | Msa0559650:intron | 25.0% |
| ! | TAGAGTTACAAAAAAAGTAG+AGG | + | chr4_1:58833101-58833120 | None:intergenic | 25.0% |
| ! | TGTAACTCTATGTTGAATTA+AGG | - | chr4_1:58833111-58833130 | Msa0559650:intron | 25.0% |
| !!! | TTTTTTGAAATAAATGGGGT+CGG | - | chr4_1:58833178-58833197 | Msa0559650:intron | 25.0% |
| ! | ATTACATATGCTCAATTATG+CGG | + | chr4_1:58833352-58833371 | None:intergenic | 25.0% |
| !! | CTATATCCTTTTCCATTTAA+AGG | + | chr4_1:58833483-58833502 | None:intergenic | 25.0% |
| ! | TTAAATGGAAAAGGATATAG+AGG | - | chr4_1:58833483-58833502 | Msa0559650:intron | 25.0% |
| ! | GATTAACATATGGAGATATA+AGG | - | chr4_1:58833505-58833524 | Msa0559650:intron | 25.0% |
| ! | TGTTTGTGTGATATTATCAT+AGG | - | chr4_1:58833553-58833572 | Msa0559650:intron | 25.0% |
| !! | ATTAGAAGTTTTGCAGTAAA+TGG | - | chr4_1:58833667-58833686 | Msa0559650:intron | 25.0% |
| ! | TATCATGTTAGAAGATTTAG+TGG | + | chr4_1:58833843-58833862 | None:intergenic | 25.0% |
| ! | ATATTAAACTCAAACAGTTC+AGG | + | chr4_1:58834198-58834217 | None:intergenic | 25.0% |
| !! | CATTTTCTTGTTAACAGAAA+AGG | + | chr4_1:58834323-58834342 | None:intergenic | 25.0% |
| !! | CTGTTAACAAGAAAATGTTT+TGG | - | chr4_1:58834326-58834345 | Msa0559650:intron | 25.0% |
| ! | GAGAATATGACAAATTCTTT+GGG | - | chr4_1:58834376-58834395 | Msa0559650:intron | 25.0% |
| ! | AGAATATGACAAATTCTTTG+GGG | - | chr4_1:58834377-58834396 | Msa0559650:intron | 25.0% |
| ! | TCAACAACAAAATTCAATTC+CGG | - | chr4_1:58834444-58834463 | Msa0559650:intron | 25.0% |
| ! | CATTGTAAATAACTAGGAAT+TGG | + | chr4_1:58834779-58834798 | None:intergenic | 25.0% |
| TCTTCTTCTTTGGATATGAT+CGG | + | chr4_1:58831320-58831339 | None:intergenic | 30.0% | |
| CATATCCAAAGAAGAAGAAT+CGG | - | chr4_1:58831322-58831341 | Msa0559650:three_prime_UTR | 30.0% | |
| AGATGACTGTGAATATACTA+AGG | - | chr4_1:58831390-58831409 | Msa0559650:three_prime_UTR | 30.0% | |
| TTAGAACAAATTGAGGAGAT+GGG | + | chr4_1:58831449-58831468 | None:intergenic | 30.0% | |
| GTTGAGCTATTTATCCAAAT+AGG | - | chr4_1:58831829-58831848 | Msa0559650:intron | 30.0% | |
| TATTTATCCAAATAGGGAAC+AGG | - | chr4_1:58831836-58831855 | Msa0559650:intron | 30.0% | |
| ATTTATCCAAATAGGGAACA+GGG | - | chr4_1:58831837-58831856 | Msa0559650:intron | 30.0% | |
| GAAGTTAGACTAGAAAAGTA+AGG | - | chr4_1:58831859-58831878 | Msa0559650:intron | 30.0% | |
| ATAAAACTTACCACTTACCA+TGG | + | chr4_1:58831912-58831931 | None:intergenic | 30.0% | |
| !! | ACTTCATTTTCTAAAGGAGA+AGG | - | chr4_1:58832000-58832019 | Msa0559650:CDS | 30.0% |
| !! | CTTCATTTTCTAAAGGAGAA+GGG | - | chr4_1:58832001-58832020 | Msa0559650:CDS | 30.0% |
| !!! | TTTTGAGGTTAGAAGAGTTA+GGG | + | chr4_1:58832281-58832300 | None:intergenic | 30.0% |
| !!! | TTTTTGAGGTTAGAAGAGTT+AGG | + | chr4_1:58832282-58832301 | None:intergenic | 30.0% |
| GTTAGAAGTAATTTCAGAGA+TGG | + | chr4_1:58832336-58832355 | None:intergenic | 30.0% | |
| !! | CTCTGAAATTACTTCTAACA+TGG | - | chr4_1:58832337-58832356 | Msa0559650:intron | 30.0% |
| ! | TGAAATGGGCCATATATTTT+GGG | + | chr4_1:58832458-58832477 | None:intergenic | 30.0% |
| ATTGCATTGGAAAGTGAAAT+GGG | + | chr4_1:58832472-58832491 | None:intergenic | 30.0% | |
| TATTGCATTGGAAAGTGAAA+TGG | + | chr4_1:58832473-58832492 | None:intergenic | 30.0% | |
| TAGAGTGTAGAATTGGAAAA+AGG | + | chr4_1:58832503-58832522 | None:intergenic | 30.0% | |
| CCATTATCATAAATGCAAAG+TGG | + | chr4_1:58832563-58832582 | None:intergenic | 30.0% | |
| CCACTTTGCATTTATGATAA+TGG | - | chr4_1:58832560-58832579 | Msa0559650:intron | 30.0% | |
| AATGCATCAATACTTAGACA+AGG | - | chr4_1:58832585-58832604 | Msa0559650:intron | 30.0% | |
| !!! | AAAGCTCAATTATTTTGGGA+CGG | - | chr4_1:58832697-58832716 | Msa0559650:intron | 30.0% |
| ! | TAACGACTTTTCAACTGATT+TGG | - | chr4_1:58832919-58832938 | Msa0559650:intron | 30.0% |
| ATCATGCTTGAAATGTAACT+AGG | - | chr4_1:58833059-58833078 | Msa0559650:intron | 30.0% | |
| TCATGCTTGAAATGTAACTA+GGG | - | chr4_1:58833060-58833079 | Msa0559650:intron | 30.0% | |
| GGATATAGAGGATTAACATA+TGG | - | chr4_1:58833495-58833514 | Msa0559650:intron | 30.0% | |
| ! | ATAAGGGCTTCATATGATTT+TGG | - | chr4_1:58833522-58833541 | Msa0559650:intron | 30.0% |
| ! | TTTTAGGCTTTTTGTGGTTA+AGG | - | chr4_1:58833631-58833650 | Msa0559650:intron | 30.0% |
| !! | GCAATAAATTTGTTGGAGTA+TGG | - | chr4_1:58833788-58833807 | Msa0559650:intron | 30.0% |
| !! | ATTTGTTGGAGTATGGTTTT+TGG | - | chr4_1:58833795-58833814 | Msa0559650:intron | 30.0% |
| ! | TTTGTTGGAGTATGGTTTTT+GGG | - | chr4_1:58833796-58833815 | Msa0559650:intron | 30.0% |
| ! | GATAGCATTTTATCTTCTTG+AGG | - | chr4_1:58833878-58833897 | Msa0559650:intron | 30.0% |
| CAATTGTTAAATGTGTAGTC+TGG | - | chr4_1:58834049-58834068 | Msa0559650:intron | 30.0% | |
| !! | TCAAGTTGACAGAAAAGTAT+CGG | + | chr4_1:58834258-58834277 | None:intergenic | 30.0% |
| GGAGAATATGACAAATTCTT+TGG | - | chr4_1:58834375-58834394 | Msa0559650:intron | 30.0% | |
| TAAGAACAAATAAACTCACG+TGG | + | chr4_1:58834518-58834537 | None:intergenic | 30.0% | |
| GGACTTCATTGTAAATAACT+AGG | + | chr4_1:58834785-58834804 | None:intergenic | 30.0% | |
| ! | AACTATAGCAGTACTGAAAT+TGG | - | chr4_1:58834843-58834862 | Msa0559650:CDS | 30.0% |
| ! | ACTATAGCAGTACTGAAATT+GGG | - | chr4_1:58834844-58834863 | Msa0559650:CDS | 30.0% |
| GATGGAAATAAATGAACATC+TGG | + | chr4_1:58834922-58834941 | None:intergenic | 30.0% | |
| ! | TATTGTTCCTGAGATTGTTT+TGG | - | chr4_1:58834978-58834997 | Msa0559650:CDS | 30.0% |
| TTTCATACCAAAACAATCTC+AGG | + | chr4_1:58834988-58835007 | None:intergenic | 30.0% | |
| TCAAACACAATTACACTCTA+TGG | + | chr4_1:58835021-58835040 | None:intergenic | 30.0% | |
| CTTCTTCTTTGGATATGATC+GGG | + | chr4_1:58831319-58831338 | None:intergenic | 35.0% | |
| !! | ATCTACCGATTCTTCTTCTT+TGG | + | chr4_1:58831330-58831349 | None:intergenic | 35.0% |
| AAGAAGAAGAATCGGTAGAT+TGG | - | chr4_1:58831330-58831349 | Msa0559650:three_prime_UTR | 35.0% | |
| GTTAGAACAAATTGAGGAGA+TGG | + | chr4_1:58831450-58831469 | None:intergenic | 35.0% | |
| ! | GAATTTGGAGTTGAAGAGAA+AGG | + | chr4_1:58831477-58831496 | None:intergenic | 35.0% |
| GAGAGATGAAATAACGTACT+CGG | + | chr4_1:58831678-58831697 | None:intergenic | 35.0% | |
| ATAGCTCAACTAAGAGCTTA+TGG | + | chr4_1:58831819-58831838 | None:intergenic | 35.0% | |
| ACTATGAAAACCATGGTAAG+TGG | - | chr4_1:58831899-58831918 | Msa0559650:intron | 35.0% | |
| AAGATTTCCTACATAGAAGC+TGG | + | chr4_1:58831959-58831978 | None:intergenic | 35.0% | |
| GATGATCTGGTTAAGTTAAG+TGG | - | chr4_1:58832030-58832049 | Msa0559650:CDS | 35.0% | |
| ! | TCCACACACTAATATGGTTT+TGG | - | chr4_1:58832195-58832214 | Msa0559650:intron | 35.0% |
| GGGATTCAGAAATACAGAAA+TGG | + | chr4_1:58832261-58832280 | None:intergenic | 35.0% | |
| ! | AGAGATGGGTTCAAAAATGT+TGG | + | chr4_1:58832321-58832340 | None:intergenic | 35.0% |
| !!! | AAGGCTCAATTATTTTGGGA+CGG | + | chr4_1:58832419-58832438 | None:intergenic | 35.0% |
| ! | GTGAAATGGGCCATATATTT+TGG | + | chr4_1:58832459-58832478 | None:intergenic | 35.0% |
| CTTATCAGAGATGCGAATTA+AGG | - | chr4_1:58833284-58833303 | Msa0559650:intron | 35.0% | |
| ! | TTTTACTCACGCTCTTTGAA+AGG | - | chr4_1:58833427-58833446 | Msa0559650:intron | 35.0% |
| TCATGCCCTTTAAATGGAAA+AGG | - | chr4_1:58833474-58833493 | Msa0559650:intron | 35.0% | |
| GTGATATTATCATAGGCATG+TGG | - | chr4_1:58833560-58833579 | Msa0559650:intron | 35.0% | |
| AGAAGCAGAGGAGATTAAAT+TGG | - | chr4_1:58833591-58833610 | Msa0559650:intron | 35.0% | |
| GAAGCAGAGGAGATTAAATT+GGG | - | chr4_1:58833592-58833611 | Msa0559650:intron | 35.0% | |
| !! | GCAATGTTTTAGGCTTTTTG+TGG | - | chr4_1:58833625-58833644 | Msa0559650:intron | 35.0% |
| TTGCAGTAAATGGTTAGAGA+AGG | - | chr4_1:58833677-58833696 | Msa0559650:intron | 35.0% | |
| TGCAGTAAATGGTTAGAGAA+GGG | - | chr4_1:58833678-58833697 | Msa0559650:intron | 35.0% | |
| ! | TTGTTGGAGTATGGTTTTTG+GGG | - | chr4_1:58833797-58833816 | Msa0559650:intron | 35.0% |
| ! | AGCATTTTATCTTCTTGAGG+TGG | - | chr4_1:58833881-58833900 | Msa0559650:intron | 35.0% |
| TAACATGTGAAACATACTGC+AGG | + | chr4_1:58834129-58834148 | None:intergenic | 35.0% | |
| ! | GTATTATTATCAAGGTACCC+TGG | - | chr4_1:58834348-58834367 | Msa0559650:intron | 35.0% |
| ! | ATATGACAAATTCTTTGGGG+AGG | - | chr4_1:58834380-58834399 | Msa0559650:intron | 35.0% |
| ! | TATGACAAATTCTTTGGGGA+GGG | - | chr4_1:58834381-58834400 | Msa0559650:intron | 35.0% |
| !! | TTTGTTGTTGACTTGTAGAG+TGG | + | chr4_1:58834435-58834454 | None:intergenic | 35.0% |
| ACAAAATTCAATTCCGGTTG+TGG | - | chr4_1:58834450-58834469 | Msa0559650:intron | 35.0% | |
| ATCCAAAGATAGTGAAGAGA+AGG | + | chr4_1:58834546-58834565 | None:intergenic | 35.0% | |
| TTTCTATCCTCATTCCATCT+GGG | + | chr4_1:58834642-58834661 | None:intergenic | 35.0% | |
| ATTTCTATCCTCATTCCATC+TGG | + | chr4_1:58834643-58834662 | None:intergenic | 35.0% | |
| !! | AAATAACATGTGCTGCTTGT+GGG | - | chr4_1:58834659-58834678 | Msa0559650:intron | 35.0% |
| CATCTCGGTCATGTATTTAA+AGG | - | chr4_1:58834685-58834704 | Msa0559650:intron | 35.0% | |
| GGTCATGTATTTAAAGGTGA+AGG | - | chr4_1:58834691-58834710 | Msa0559650:intron | 35.0% | |
| GTGAAATGCTATTGACACAA+TGG | + | chr4_1:58834741-58834760 | None:intergenic | 35.0% | |
| GTAAATAACTAGGAATTGGC+TGG | + | chr4_1:58834775-58834794 | None:intergenic | 35.0% | |
| GATACATCATATGATGCACA+TGG | - | chr4_1:58834813-58834832 | Msa0559650:CDS | 35.0% | |
| ATTTATTTCCATCCTCTCCT+GGG | - | chr4_1:58834929-58834948 | Msa0559650:CDS | 35.0% | |
| AACAATCTCAGGAACAATAC+AGG | + | chr4_1:58834977-58834996 | None:intergenic | 35.0% | |
| AGTATCCACCGTTGTTTAAT+AGG | - | chr4_1:58835087-58835106 | Msa0559650:five_prime_UTR | 35.0% | |
| GTATCCACCGTTGTTTAATA+GGG | - | chr4_1:58835088-58835107 | Msa0559650:five_prime_UTR | 35.0% | |
| TATCCACCGTTGTTTAATAG+GGG | - | chr4_1:58835089-58835108 | Msa0559650:five_prime_UTR | 35.0% | |
| CAGTCATCTTGTGTTCATCA+AGG | + | chr4_1:58831379-58831398 | None:intergenic | 40.0% | |
| ! | ACAAATTGAGGAGATGGGTT+TGG | + | chr4_1:58831444-58831463 | None:intergenic | 40.0% |
| GGTAGGGTTAGAACAAATTG+AGG | + | chr4_1:58831456-58831475 | None:intergenic | 40.0% | |
| TGGAGTTGAAGAGAAAGGTA+GGG | + | chr4_1:58831472-58831491 | None:intergenic | 40.0% | |
| TTGGAGTTGAAGAGAAAGGT+AGG | + | chr4_1:58831473-58831492 | None:intergenic | 40.0% | |
| TCAGAATTCGAAACTGCTCA+GGG | + | chr4_1:58831643-58831662 | None:intergenic | 40.0% | |
| !! | TTTCGAATTCTGAGGCAGAA+AGG | - | chr4_1:58831650-58831669 | Msa0559650:CDS | 40.0% |
| TAACTTCCCTGTTCCCTATT+TGG | + | chr4_1:58831846-58831865 | None:intergenic | 40.0% | |
| TGCTCAGTGTCATGTAAGTT+AGG | - | chr4_1:58832117-58832136 | Msa0559650:intron | 40.0% | |
| GCCAAAACCATATTAGTGTG+TGG | + | chr4_1:58832199-58832218 | None:intergenic | 40.0% | |
| !!! | CTCAATTATTTTGGGACGGA+GGG | + | chr4_1:58832701-58832720 | None:intergenic | 40.0% |
| !!! | CTCAATTATTTTGGGACGGA+GGG | - | chr4_1:58832701-58832720 | Msa0559650:intron | 40.0% |
| TGGATAGAACATGCTGAAAG+AGG | - | chr4_1:58832939-58832958 | Msa0559650:intron | 40.0% | |
| ACAAACACTATGGCTGACAT+CGG | - | chr4_1:58832985-58833004 | Msa0559650:intron | 40.0% | |
| CTGTACTCATGCCCTTTAAA+TGG | - | chr4_1:58833468-58833487 | Msa0559650:intron | 40.0% | |
| TATTATCATAGGCATGTGGC+AGG | - | chr4_1:58833564-58833583 | Msa0559650:intron | 40.0% | |
| ATTATCATAGGCATGTGGCA+GGG | - | chr4_1:58833565-58833584 | Msa0559650:intron | 40.0% | |
| TTGTGGTTAAGGAGATGTCT+TGG | - | chr4_1:58833642-58833661 | Msa0559650:intron | 40.0% | |
| AGTAAATGGTTAGAGAAGGG+AGG | - | chr4_1:58833681-58833700 | Msa0559650:intron | 40.0% | |
| TGATGCAGTAGAAGTTTAGC+AGG | - | chr4_1:58833706-58833725 | Msa0559650:intron | 40.0% | |
| TAGAAGTTTAGCAGGTGTCA+AGG | - | chr4_1:58833714-58833733 | Msa0559650:intron | 40.0% | |
| AGAAGTTTAGCAGGTGTCAA+GGG | - | chr4_1:58833715-58833734 | Msa0559650:intron | 40.0% | |
| !!! | TTTTGGGGCAGTGATGTTAT+TGG | - | chr4_1:58833812-58833831 | Msa0559650:intron | 40.0% |
| TGTCATATTCTCCTGTTCCA+GGG | + | chr4_1:58834368-58834387 | None:intergenic | 40.0% | |
| TTGTCATATTCTCCTGTTCC+AGG | + | chr4_1:58834369-58834388 | None:intergenic | 40.0% | |
| GAACAAATAAACTCACGTGG+CGG | + | chr4_1:58834515-58834534 | None:intergenic | 40.0% | |
| TGCCTTCTCTTCACTATCTT+TGG | - | chr4_1:58834541-58834560 | Msa0559650:intron | 40.0% | |
| !! | GAAATAACATGTGCTGCTTG+TGG | - | chr4_1:58834658-58834677 | Msa0559650:intron | 40.0% |
| !! | AATAACATGTGCTGCTTGTG+GGG | - | chr4_1:58834660-58834679 | Msa0559650:intron | 40.0% |
| TTACAATGAAGTCCACTCTG+TGG | - | chr4_1:58834791-58834810 | Msa0559650:CDS | 40.0% | |
| CATATGATGTATCCACAGAG+TGG | + | chr4_1:58834806-58834825 | None:intergenic | 40.0% | |
| CATTTATTTCCATCCTCTCC+TGG | - | chr4_1:58834928-58834947 | Msa0559650:CDS | 40.0% | |
| TTTATTTCCATCCTCTCCTG+GGG | - | chr4_1:58834930-58834949 | Msa0559650:CDS | 40.0% | |
| TCCAGAAATCGGAGGAAGAA+TGG | - | chr4_1:58831603-58831622 | Msa0559650:three_prime_UTR | 45.0% | |
| CAGAATTCGAAACTGCTCAG+GGG | + | chr4_1:58831642-58831661 | None:intergenic | 45.0% | |
| CTCAGAATTCGAAACTGCTC+AGG | + | chr4_1:58831644-58831663 | None:intergenic | 45.0% | |
| CTGAGCAGTTTCGAATTCTG+AGG | - | chr4_1:58831642-58831661 | Msa0559650:CDS | 45.0% | |
| TTTCCTACATAGAAGCTGGC+TGG | + | chr4_1:58831955-58831974 | None:intergenic | 45.0% | |
| ! | AGAAGGGCATGAAGATGATC+TGG | - | chr4_1:58832017-58832036 | Msa0559650:CDS | 45.0% |
| !!! | GCTCAATTATTTTGGGACGG+AGG | + | chr4_1:58832700-58832719 | None:intergenic | 45.0% |
| AGAGAGAGAGAGAGAGAGAA+TGG | + | chr4_1:58832621-58832640 | None:intergenic | 45.0% | |
| !!! | GCTCAATTATTTTGGGACGG+AGG | - | chr4_1:58832700-58832719 | Msa0559650:intron | 45.0% |
| ATTGTACGCACTTGACGAGA+AGG | - | chr4_1:58832799-58832818 | Msa0559650:CDS | 45.0% | |
| TTGTACGCACTTGACGAGAA+GGG | - | chr4_1:58832800-58832819 | Msa0559650:CDS | 45.0% | |
| TGCAGATAAACTAAGCGCTC+AGG | + | chr4_1:58832843-58832862 | None:intergenic | 45.0% | |
| CAAACACTATGGCTGACATC+GGG | - | chr4_1:58832986-58833005 | Msa0559650:intron | 45.0% | |
| ! | TCACGCTCTTTGAAAGGTCA+CGG | - | chr4_1:58833433-58833452 | Msa0559650:intron | 45.0% |
| GAGGAGATTAAATTGGGCAG+AGG | - | chr4_1:58833598-58833617 | Msa0559650:intron | 45.0% | |
| ! | CAGAGGAGCAGCAATGTTTT+AGG | - | chr4_1:58833615-58833634 | Msa0559650:intron | 45.0% |
| ! | TTATCAAGGTACCCTGGAAC+AGG | - | chr4_1:58834354-58834373 | Msa0559650:intron | 45.0% |
| AATTCAATTCCGGTTGTGGC+TGG | - | chr4_1:58834454-58834473 | Msa0559650:intron | 45.0% | |
| TTATGTGTTTCACCACCAGC+CGG | - | chr4_1:58834615-58834634 | Msa0559650:intron | 45.0% | |
| !! | ATAACATGTGCTGCTTGTGG+GGG | - | chr4_1:58834661-58834680 | Msa0559650:intron | 45.0% |
| ! | CAGTACTGAAATTGGGACTG+TGG | - | chr4_1:58834851-58834870 | Msa0559650:CDS | 45.0% |
| TTATTTCCATCCTCTCCTGG+GGG | - | chr4_1:58834931-58834950 | Msa0559650:CDS | 45.0% | |
| !!! | ATTTTTATTTTTTAAGTAAA+AGG | - | chr4_1:58832893-58832912 | Msa0559650:intron | 5.0% |
| !!! | ATATTTGTTTATAATTTTTT+TGG | - | chr4_1:58834006-58834025 | Msa0559650:intron | 5.0% |
| GTGACGTTGAGGGAAGAAAG+AGG | + | chr4_1:58831422-58831441 | None:intergenic | 50.0% | |
| !! | GATGGGTTTGGTGACGTTGA+GGG | + | chr4_1:58831432-58831451 | None:intergenic | 50.0% |
| !! | AGATGGGTTTGGTGACGTTG+AGG | + | chr4_1:58831433-58831452 | None:intergenic | 50.0% |
| GAGATGGTAGGGAGAGAGTT+GGG | + | chr4_1:58831512-58831531 | None:intergenic | 50.0% | |
| GCTGACGAATGGAGATGGTA+GGG | + | chr4_1:58831523-58831542 | None:intergenic | 50.0% | |
| GCCATTCTTCCTCCGATTTC+TGG | + | chr4_1:58831607-58831626 | None:intergenic | 50.0% | |
| GTCTACAGTTGTGCAGGTTG+CGG | - | chr4_1:58834405-58834424 | Msa0559650:intron | 50.0% | |
| TCTACAGTTGTGCAGGTTGC+GGG | - | chr4_1:58834406-58834425 | Msa0559650:intron | 50.0% | |
| TCCAGGAACACCCTCATAGA+AGG | + | chr4_1:58834484-58834503 | None:intergenic | 50.0% | |
| ATCCTCATTCCATCTGGGTC+CGG | + | chr4_1:58834637-58834656 | None:intergenic | 50.0% | |
| ACACAATGGCGTTCGTTCGT+GGG | + | chr4_1:58834727-58834746 | None:intergenic | 50.0% | |
| TGGGACTGTGGCTTATAGAG+TGG | - | chr4_1:58834863-58834882 | Msa0559650:CDS | 50.0% | |
| GGGTGGGGTGAAGGTGAATT+TGG | + | chr4_1:58831492-58831511 | None:intergenic | 55.0% | |
| TGGTAGGGAGAGAGTTGGGT+GGG | + | chr4_1:58831508-58831527 | None:intergenic | 55.0% | |
| ATGGTAGGGAGAGAGTTGGG+TGG | + | chr4_1:58831509-58831528 | None:intergenic | 55.0% | |
| GGAGATGGTAGGGAGAGAGT+TGG | + | chr4_1:58831513-58831532 | None:intergenic | 55.0% | |
| GGCTGACGAATGGAGATGGT+AGG | + | chr4_1:58831524-58831543 | None:intergenic | 55.0% | |
| CTTCGGCTGACGAATGGAGA+TGG | + | chr4_1:58831528-58831547 | None:intergenic | 55.0% | |
| AGGAGTAGGTGCAGCAGACA+TGG | + | chr4_1:58831576-58831595 | None:intergenic | 55.0% | |
| ATGTCTGCTGCACCTACTCC+TGG | - | chr4_1:58831575-58831594 | Msa0559650:three_prime_UTR | 55.0% | |
| !! | TCCTGGCTCGGTCCAGAAAT+CGG | - | chr4_1:58831592-58831611 | Msa0559650:three_prime_UTR | 55.0% |
| GAGCCAGCCAGCTTCTATGT+AGG | - | chr4_1:58831949-58831968 | Msa0559650:CDS | 55.0% | |
| ATCATAGGCATGTGGCAGGG+AGG | - | chr4_1:58833568-58833587 | Msa0559650:intron | 55.0% | |
| GAGGGAGTCTACAGTTGTGC+AGG | - | chr4_1:58834399-58834418 | Msa0559650:intron | 55.0% | |
| GGAACACCCTCATAGAAGGC+TGG | + | chr4_1:58834480-58834499 | None:intergenic | 55.0% | |
| !! | GCCTTCTATGAGGGTGTTCC+TGG | - | chr4_1:58834480-58834499 | Msa0559650:intron | 55.0% |
| ACGTGGCGGTTTATAGCTCC+AGG | + | chr4_1:58834501-58834520 | None:intergenic | 55.0% | |
| GACACAATGGCGTTCGTTCG+TGG | + | chr4_1:58834728-58834747 | None:intergenic | 55.0% | |
| CATAATACAGCCCCCAGGAG+AGG | + | chr4_1:58834944-58834963 | None:intergenic | 55.0% | |
| GCGAACATAATACAGCCCCC+AGG | + | chr4_1:58834949-58834968 | None:intergenic | 55.0% | |
| GAGAGAGTTGGGTGGGGTGA+AGG | + | chr4_1:58831501-58831520 | None:intergenic | 60.0% | |
| GGTAGGGAGAGAGTTGGGTG+GGG | + | chr4_1:58831507-58831526 | None:intergenic | 60.0% | |
| TCCATTCGTCAGCCGAAGCG+TGG | - | chr4_1:58831530-58831549 | Msa0559650:three_prime_UTR | 60.0% | |
| ACCACGCTTCGGCTGACGAA+TGG | + | chr4_1:58831534-58831553 | None:intergenic | 60.0% | |
| ! | CAGCCGAAGCGTGGTTTTCG+CGG | - | chr4_1:58831539-58831558 | Msa0559650:three_prime_UTR | 60.0% |
| CCACCGCGAAAACCACGCTT+CGG | + | chr4_1:58831545-58831564 | None:intergenic | 60.0% | |
| TGCTGCACCTACTCCTGGCT+CGG | - | chr4_1:58831580-58831599 | Msa0559650:three_prime_UTR | 60.0% | |
| TTCTGGACCGAGCCAGGAGT+AGG | + | chr4_1:58831590-58831609 | None:intergenic | 60.0% | |
| ! | TCCGATTTCTGGACCGAGCC+AGG | + | chr4_1:58831596-58831615 | None:intergenic | 60.0% |
| !! | TGGCTCGGTCCAGAAATCGG+AGG | - | chr4_1:58831595-58831614 | Msa0559650:three_prime_UTR | 60.0% |
| CACTATGGCTGACATCGGGC+TGG | - | chr4_1:58832990-58833009 | Msa0559650:intron | 60.0% | |
| !! | ATGGCTGACATCGGGCTGGT+TGG | - | chr4_1:58832994-58833013 | Msa0559650:intron | 60.0% |
| !! | TGGCTGACATCGGGCTGGTT+GGG | - | chr4_1:58832995-58833014 | Msa0559650:intron | 60.0% |
| ! | TGGCTGGCCAGCCTTCTATG+AGG | - | chr4_1:58834470-58834489 | Msa0559650:intron | 60.0% |
| ! | GGCTGGCCAGCCTTCTATGA+GGG | - | chr4_1:58834471-58834490 | Msa0559650:intron | 60.0% |
| TCATTCCATCTGGGTCCGGC+TGG | + | chr4_1:58834633-58834652 | None:intergenic | 60.0% | |
| AGCCGGACCCAGATGGAATG+AGG | - | chr4_1:58834632-58834651 | Msa0559650:intron | 60.0% | |
| GCTGCTTGTGGGGGACATCT+CGG | - | chr4_1:58834670-58834689 | Msa0559650:intron | 60.0% | |
| TGGCGTTCGTTCGTGGGTGT+CGG | + | chr4_1:58834721-58834740 | None:intergenic | 60.0% | |
| ATACAGCCCCCAGGAGAGGA+TGG | + | chr4_1:58834940-58834959 | None:intergenic | 60.0% | |
| ! | CCGAAGCGTGGTTTTCGCGG+TGG | - | chr4_1:58831542-58831561 | Msa0559650:three_prime_UTR | 65.0% |
| GTGGCAGGGAGGAGAAGCAG+AGG | - | chr4_1:58833579-58833598 | Msa0559650:intron | 65.0% | |
| ! | GAAGGCTGGCCAGCCACAAC+CGG | + | chr4_1:58834466-58834485 | None:intergenic | 65.0% |
| TTCCATCTGGGTCCGGCTGG+TGG | + | chr4_1:58834630-58834649 | None:intergenic | 65.0% | |
| CACCACCAGCCGGACCCAGA+TGG | - | chr4_1:58834625-58834644 | Msa0559650:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 58831310 | 58835112 | 58831310 | ID=Msa0559650;Name=Msa0559650 |
| chr4_1 | mRNA | 58831310 | 58835112 | 58831310 | ID=Msa0559650-mRNA-1;Parent=Msa0559650;Name=Msa0559650-mRNA-1;_AED=0.05;_eAED=0.05;_QI=82|0.33|0.75|0.75|1|1|4|326|230 |
| chr4_1 | exon | 58831310 | 58831788 | 58831310 | ID=Msa0559650-mRNA-1:exon:18066;Parent=Msa0559650-mRNA-1 |
| chr4_1 | exon | 58831904 | 58832060 | 58831904 | ID=Msa0559650-mRNA-1:exon:18065;Parent=Msa0559650-mRNA-1 |
| chr4_1 | exon | 58832741 | 58832836 | 58832741 | ID=Msa0559650-mRNA-1:exon:18064;Parent=Msa0559650-mRNA-1 |
| chr4_1 | exon | 58834744 | 58835112 | 58834744 | ID=Msa0559650-mRNA-1:exon:18063;Parent=Msa0559650-mRNA-1 |
| chr4_1 | five_prime_UTR | 58835031 | 58835112 | 58835031 | ID=Msa0559650-mRNA-1:five_prime_utr;Parent=Msa0559650-mRNA-1 |
| chr4_1 | CDS | 58834744 | 58835030 | 58834744 | ID=Msa0559650-mRNA-1:cds;Parent=Msa0559650-mRNA-1 |
| chr4_1 | CDS | 58832741 | 58832836 | 58832741 | ID=Msa0559650-mRNA-1:cds;Parent=Msa0559650-mRNA-1 |
| chr4_1 | CDS | 58831904 | 58832060 | 58831904 | ID=Msa0559650-mRNA-1:cds;Parent=Msa0559650-mRNA-1 |
| chr4_1 | CDS | 58831636 | 58831788 | 58831636 | ID=Msa0559650-mRNA-1:cds;Parent=Msa0559650-mRNA-1 |
| chr4_1 | three_prime_UTR | 58831310 | 58831635 | 58831310 | ID=Msa0559650-mRNA-1:three_prime_utr;Parent=Msa0559650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
