AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0587300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0587300 MtrunA17_Chr4g0003281 99.430 351 2 0 1 351 1 351 0.0 726
Msa0587300 MtrunA17_Chr4g0064021 61.290 341 130 1 34 374 20 358 1.25e-151 433
Msa0587300 MtrunA17_Chr4g0043851 47.443 352 180 2 35 386 27 373 5.61e-114 338
Msa0587300 MtrunA17_Chr1g0189111 52.698 315 147 2 37 351 28 340 9.73e-114 338
Msa0587300 MtrunA17_Chr2g0321511 45.665 346 177 4 8 351 1 337 3.24e-111 330
Msa0587300 MtrunA17_Chr2g0285901 49.196 311 156 2 40 350 24 332 1.87e-104 313
Msa0587300 MtrunA17_Chr4g0026321 45.687 313 169 1 39 351 28 339 1.36e-103 311
Msa0587300 MtrunA17_Chr5g0439251 47.468 316 164 2 38 352 23 337 9.27e-98 299
Msa0587300 MtrunA17_Chr1g0177171 45.981 311 166 2 38 347 36 345 2.00e-94 291
Msa0587300 MtrunA17_Chr4g0034901 42.566 343 193 2 8 350 1 339 8.41e-93 286
Msa0587300 MtrunA17_Chr1g0155001 44.373 311 172 1 41 350 25 335 1.23e-91 281
Msa0587300 MtrunA17_Chr3g0144531 42.262 336 190 2 15 350 7 338 3.46e-90 279
Msa0587300 MtrunA17_Chr8g0339191 40.533 338 194 5 18 351 9 343 4.92e-89 276
Msa0587300 MtrunA17_Chr7g0234821 42.222 315 177 4 41 351 27 340 2.22e-88 275
Msa0587300 MtrunA17_Chr3g0119541 45.016 311 169 2 41 350 27 336 2.62e-88 271
Msa0587300 MtrunA17_Chr1g0146831 43.042 309 169 4 41 347 32 335 8.70e-87 268
Msa0587300 MtrunA17_Chr6g0487261 40.653 337 198 2 17 353 5 339 2.48e-86 271
Msa0587300 MtrunA17_Chr8g0389741 43.226 310 175 1 41 350 29 337 1.43e-84 266
Msa0587300 MtrunA17_Chr4g0046311 36.778 329 201 4 29 351 12 339 1.44e-76 244
Msa0587300 MtrunA17_Chr3g0110371 40.000 335 194 3 20 351 7 337 4.85e-76 243
Msa0587300 MtrunA17_Chr1g0161011 37.644 348 212 3 41 384 25 371 2.29e-74 239
Msa0587300 MtrunA17_Chr5g0434591 36.927 371 227 4 18 384 3 370 3.08e-74 239
Msa0587300 MtrunA17_Chr7g0223961 40.446 314 178 7 39 350 22 328 6.21e-74 237
Msa0587300 MtrunA17_Chr4g0075031 35.817 349 219 3 41 385 46 393 9.77e-72 233
Msa0587300 MtrunA17_Chr3g0121271 38.438 333 195 5 18 347 10 335 1.10e-70 230
Msa0587300 MtrunA17_Chr7g0250301 39.032 310 180 5 41 350 9 309 4.77e-69 220
Msa0587300 MtrunA17_Chr4g0038971 37.838 333 188 7 16 348 4 317 5.85e-68 218
Msa0587300 MtrunA17_Chr2g0294601 39.286 308 178 6 41 347 60 359 2.06e-67 218
Msa0587300 MtrunA17_Chr4g0038981 37.910 335 189 7 16 350 4 319 3.09e-67 216
Msa0587300 MtrunA17_Chr8g0378621 36.716 335 203 4 20 351 11 339 3.94e-67 221
Msa0587300 MtrunA17_Chr4g0039011 38.462 312 179 5 39 350 41 339 5.20e-67 216
Msa0587300 MtrunA17_Chr4g0043511 40.705 312 179 6 41 350 63 370 3.08e-66 219
Msa0587300 MtrunA17_Chr4g0039021 38.699 292 170 3 66 357 7 289 3.35e-66 212
Msa0587300 MtrunA17_Chr4g0038941 39.432 317 176 7 36 350 46 348 1.01e-65 213
Msa0587300 MtrunA17_Chr4g0039071 38.438 320 185 6 37 352 19 330 1.25e-64 211
Msa0587300 MtrunA17_Chr4g0038961 38.065 310 178 6 41 350 24 319 1.30e-64 209
Msa0587300 MtrunA17_Chr2g0294591 37.338 308 184 6 41 347 31 330 2.79e-61 201
Msa0587300 MtrunA17_Chr1g0174261 39.085 284 166 4 69 352 1 277 4.42e-60 198
Msa0587300 MtrunA17_Chr4g0069801 35.977 353 193 12 12 351 7 339 1.90e-57 195
Msa0587300 MtrunA17_Chr1g0148391 36.842 342 198 10 17 352 9 338 8.93e-56 190
Msa0587300 MtrunA17_Chr8g0383311 33.815 346 214 11 14 352 18 355 4.33e-54 186
Msa0587300 MtrunA17_Chr7g0250321 37.879 264 156 4 41 304 29 284 1.26e-53 179
Msa0587300 MtrunA17_Chr6g0461601 36.615 325 183 13 41 352 27 341 2.88e-51 178
Msa0587300 MtrunA17_Chr4g0062771 33.427 356 215 13 8 352 1 345 2.72e-50 176
Msa0587300 MtrunA17_Chr7g0253091 34.012 344 208 12 19 352 5 339 5.06e-50 175
Msa0587300 MtrunA17_Chr3g0138741 34.796 319 194 10 41 352 32 343 8.27e-49 172
Msa0587300 MtrunA17_Chr3g0105981 35.220 318 194 8 41 353 28 338 1.59e-48 170
Msa0587300 MtrunA17_Chr2g0290821 33.542 319 200 9 41 352 29 342 3.99e-48 170
Msa0587300 MtrunA17_Chr4g0076581 35.202 321 190 10 41 352 34 345 1.04e-46 166
Msa0587300 MtrunA17_Chr2g0306311 31.383 376 213 14 11 352 6 370 1.64e-45 163
Msa0587300 MtrunA17_Chr3g0129341 32.849 344 210 14 18 352 13 344 2.25e-43 157
Msa0587300 MtrunA17_Chr5g0436361 33.110 299 188 8 57 351 54 344 1.19e-39 145
Msa0587300 MtrunA17_Chr2g0294581 38.806 134 81 1 41 173 77 210 2.97e-21 92.8
Msa0587300 MtrunA17_Chr4g0018861 45.055 91 43 4 258 347 79 163 2.96e-15 74.3
Msa0587300 MtrunA17_Chr4g0018771 42.353 85 44 2 263 347 86 165 8.85e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0587300 AT3G15800.1 73.270 318 84 1 35 351 38 355 6.95e-173 488
Msa0587300 AT2G26600.1 62.776 317 118 0 35 351 29 345 2.13e-151 433
Msa0587300 AT2G26600.2 63.415 246 90 0 106 351 6 251 2.97e-118 345
Msa0587300 AT5G42100.2 48.788 330 161 4 25 351 16 340 5.12e-107 322
Msa0587300 AT5G42100.1 48.788 330 161 4 25 351 16 340 9.67e-107 321
Msa0587300 AT2G27500.2 46.795 312 166 0 41 352 30 341 1.47e-106 318
Msa0587300 AT2G27500.1 46.795 312 166 0 41 352 30 341 4.74e-106 318
Msa0587300 AT1G30080.2 49.677 310 155 1 41 350 37 345 6.04e-106 317
Msa0587300 AT1G30080.1 49.677 310 155 1 41 350 37 345 1.03e-105 318
Msa0587300 AT4G18340.1 43.360 369 202 4 20 387 16 378 7.82e-105 315
Msa0587300 AT4G18340.2 43.631 369 201 4 20 387 16 378 8.93e-105 314
Msa0587300 AT1G32860.1 47.619 315 162 2 39 351 28 341 3.65e-102 309
Msa0587300 AT4G26830.1 46.429 336 173 3 13 347 2 331 5.27e-98 299
Msa0587300 AT4G26830.2 47.756 312 160 2 37 347 26 335 3.08e-96 295
Msa0587300 AT2G05790.1 46.815 314 165 2 38 350 23 335 9.65e-94 289
Msa0587300 AT4G34480.2 47.097 310 164 0 41 350 27 336 4.20e-93 283
Msa0587300 AT5G42720.1 46.945 311 164 1 41 350 27 337 2.06e-92 285
Msa0587300 AT2G16230.1 44.839 310 171 0 41 350 26 335 3.95e-92 286
Msa0587300 AT5G55180.2 44.444 315 171 3 35 347 22 334 3.19e-91 282
Msa0587300 AT5G55180.1 44.444 315 171 3 35 347 22 334 3.78e-91 282
Msa0587300 AT4G34480.1 47.097 310 164 0 41 350 27 336 6.71e-91 283
Msa0587300 AT5G24318.4 41.742 333 178 6 20 350 19 337 6.80e-91 278
Msa0587300 AT2G27500.3 47.710 262 137 0 91 352 2 263 3.57e-89 272
Msa0587300 AT5G24318.2 40.179 336 194 4 17 350 7 337 4.92e-89 276
Msa0587300 AT5G24318.1 40.179 336 194 4 17 350 7 337 6.42e-89 276
Msa0587300 AT3G07320.1 41.250 320 183 4 36 351 21 339 1.47e-86 270
Msa0587300 AT5G56590.1 41.009 317 186 1 35 350 21 337 1.12e-83 264
Msa0587300 AT2G01630.2 38.506 348 209 3 41 384 24 370 2.28e-80 252
Msa0587300 AT2G01630.3 38.506 348 209 3 41 384 24 370 8.39e-80 252
Msa0587300 AT2G01630.1 38.506 348 209 3 41 384 24 370 9.00e-79 251
Msa0587300 AT4G29360.2 42.173 313 180 1 41 353 38 349 1.06e-76 247
Msa0587300 AT4G29360.1 41.231 325 190 1 29 353 16 339 1.11e-76 247
Msa0587300 AT3G23770.1 36.842 323 197 4 35 351 32 353 3.70e-75 241
Msa0587300 AT3G13560.4 40.491 326 187 4 29 351 18 339 3.70e-73 237
Msa0587300 AT3G13560.1 40.491 326 187 4 29 351 18 339 3.70e-73 237
Msa0587300 AT3G13560.2 40.491 326 187 4 29 351 18 339 3.70e-73 237
Msa0587300 AT3G13560.5 40.491 326 187 4 29 351 18 339 3.70e-73 237
Msa0587300 AT3G13560.3 40.491 326 187 4 29 351 18 339 3.70e-73 237
Msa0587300 AT4G14080.1 36.392 316 193 5 41 351 43 355 5.99e-72 233
Msa0587300 AT1G11820.3 36.103 349 218 3 41 385 45 392 1.25e-71 232
Msa0587300 AT1G66250.1 39.185 319 188 4 38 352 29 345 3.33e-71 232
Msa0587300 AT1G11820.2 36.103 349 218 3 41 385 45 392 3.76e-71 232
Msa0587300 AT1G11820.1 38.387 310 187 2 41 347 45 353 5.41e-71 228
Msa0587300 AT3G46570.1 40.171 351 185 13 9 350 1 335 4.62e-68 219
Msa0587300 AT5G20390.1 38.835 309 179 6 41 348 34 333 5.12e-67 216
Msa0587300 AT3G61810.1 34.385 317 193 4 41 351 56 363 6.04e-64 209
Msa0587300 AT4G16260.1 35.455 330 200 6 20 347 4 322 9.94e-64 207
Msa0587300 AT4G34480.3 49.776 223 112 0 128 350 3 225 5.25e-63 207
Msa0587300 AT3G57270.1 36.656 311 188 5 38 347 25 327 2.29e-62 204
Msa0587300 AT1G77780.1 36.667 330 195 8 20 348 7 323 3.09e-62 204
Msa0587300 AT3G57260.1 35.435 333 200 7 18 350 12 329 8.35e-61 200
Msa0587300 AT3G57260.2 35.435 333 200 7 18 350 28 345 1.15e-60 200
Msa0587300 AT4G16260.2 35.644 303 182 6 47 347 2 293 4.99e-60 197
Msa0587300 AT5G20340.1 36.246 309 187 6 41 348 44 343 2.46e-59 196
Msa0587300 AT2G39640.1 35.905 337 203 8 15 350 7 331 5.56e-59 201
Msa0587300 AT3G55430.1 38.170 317 177 12 41 350 30 334 7.88e-58 195
Msa0587300 AT5G20330.1 36.570 309 186 6 41 348 35 334 1.13e-57 192
Msa0587300 AT1G33220.1 34.337 332 208 6 8 337 1 324 6.67e-57 189
Msa0587300 AT1G77790.1 37.380 313 184 7 41 350 31 334 1.26e-56 189
Msa0587300 AT5G24318.3 44.279 201 107 2 151 350 2 198 1.27e-54 183
Msa0587300 AT3G57240.1 34.194 310 190 6 38 347 33 328 2.36e-54 183
Msa0587300 AT5G64790.1 35.000 340 205 10 20 351 8 339 2.49e-54 187
Msa0587300 AT5G20870.1 37.152 323 186 10 41 351 31 348 2.66e-51 179
Msa0587300 AT4G31140.1 35.535 318 193 9 41 352 28 339 1.74e-50 177
Msa0587300 AT1G64760.1 35.174 344 202 12 20 352 4 337 3.13e-50 176
Msa0587300 AT1G64760.2 35.174 344 202 12 20 352 4 337 3.13e-50 176
Msa0587300 AT5G20560.1 33.036 336 212 7 18 348 8 335 2.46e-49 170
Msa0587300 AT2G19440.2 36.137 321 187 12 41 352 22 333 1.18e-48 172
Msa0587300 AT2G19440.1 36.137 321 187 12 41 352 22 333 1.18e-48 172
Msa0587300 AT5G18220.1 32.759 348 213 11 11 352 8 340 2.36e-48 171
Msa0587300 AT5G58090.1 34.385 317 196 9 41 351 23 333 1.63e-47 169
Msa0587300 AT3G04010.1 35.514 321 189 11 41 352 34 345 3.34e-47 168
Msa0587300 AT3G24330.1 33.983 359 206 16 5 352 15 353 7.96e-47 167
Msa0587300 AT5G58480.1 33.333 345 205 12 30 358 12 347 4.07e-44 159
Msa0587300 AT4G17180.1 32.537 335 203 12 27 352 12 332 2.82e-43 157
Msa0587300 AT3G55780.1 32.237 304 191 9 54 350 49 344 2.51e-40 147

Find 67 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTACATGAAACCTTTAT+TGG 0.134774 4_2:-8789055 Msa0587300:CDS
CACCATCTTCATGTACATTT+AGG 0.162171 4_2:-8789089 Msa0587300:CDS
CCTCGTGTTCATTCTTTCTT+TGG 0.185604 4_2:-8790240 Msa0587300:CDS
AATTATAAATTGCAGGGAAT+TGG 0.233656 4_2:-8786460 Msa0587300:intron
GTGGTGGAAATATTGAAGTT+TGG 0.257640 4_2:-8789227 Msa0587300:CDS
AGAAGTGTGACCACACTTTC+AGG 0.269693 4_2:+8789474 None:intergenic
GTCATAATGTAGTTTACTTT+TGG 0.276964 4_2:+8788906 None:intergenic
GGGTATGCATTTATATAAAA+AGG 0.279248 4_2:+8789009 None:intergenic
TTTATTTAGAAAATTGTTAC+AGG 0.303318 4_2:+8786324 None:intergenic
ATTGTCTTTAATCCAATTCA+TGG 0.306136 4_2:+8789311 None:intergenic
TTCTAAATAAATTGAATGTA+TGG 0.317709 4_2:-8786312 Msa0587300:three_prime_UTR
ACCATCTTCATGTACATTTA+GGG 0.319187 4_2:-8789088 Msa0587300:CDS
GCGAAGATCGCGCCATGAAT+TGG 0.330087 4_2:-8789323 Msa0587300:CDS
ATAGGCCTAAAATGTTGGTT+AGG 0.346325 4_2:-8788687 Msa0587300:CDS
GAAATTTGGGTTTGATAAGA+TGG 0.348519 4_2:-8788839 Msa0587300:CDS
TCCAATAAAGGTTTCATGTA+AGG 0.348984 4_2:+8789054 None:intergenic
TGGTGGAAATATTGAAGTTT+GGG 0.349355 4_2:-8789226 Msa0587300:CDS
ATTATAAATTGCAGGGAATT+GGG 0.372588 4_2:-8786459 Msa0587300:intron
TTAGGGAACAAAGCATTTAC+TGG 0.375725 4_2:-8789543 Msa0587300:CDS
TGTCTTTCTGATCCTGGTCC+AGG 0.404190 4_2:+8788628 None:intergenic
AAAGCATTTACTGGAACATA+TGG 0.413675 4_2:-8789534 Msa0587300:CDS
GATTGTTTCTGAGACTGGTT+GGG 0.414418 4_2:-8788812 Msa0587300:CDS
CTAAGTGCCTTCAAAGGATC+TGG 0.417558 4_2:-8789399 Msa0587300:CDS
CAGATCCTTTGAAGGCACTT+AGG 0.437728 4_2:+8789400 None:intergenic
TCCTATTCCAGATCCTTTGA+AGG 0.453072 4_2:+8789392 None:intergenic
GCTTAGACTTCAACATCAAA+TGG 0.455180 4_2:-8790272 Msa0587300:CDS
AGAGAAAAGGAACACCTCAT+AGG 0.455796 4_2:-8788705 Msa0587300:CDS
TTCAATGAGAATTTGAAGCC+TGG 0.457788 4_2:-8788646 Msa0587300:CDS
AAAATAGTTGGAATTGCCAT+TGG 0.458980 4_2:-8789264 Msa0587300:CDS
TAGGCCTAAAATGTTGGTTA+GGG 0.461164 4_2:-8788686 Msa0587300:CDS
CCAAAGTGTCTTTCTGATCC+TGG 0.464550 4_2:+8788622 None:intergenic
TTTGGATTATTTAATCATGA+TGG 0.466918 4_2:-8788604 Msa0587300:CDS
AAGAGGTTACTTAAGAGAAA+AGG 0.468730 4_2:-8788718 Msa0587300:CDS
GGAACATATGGAGTAAACTA+TGG 0.471466 4_2:-8789522 Msa0587300:CDS
AATGTTCAACCATATCTTCC+AGG 0.475716 4_2:-8789291 Msa0587300:CDS
GCCTTCAAAGGATCTGGAAT+AGG 0.476160 4_2:-8789393 Msa0587300:CDS
GAAGTGTGACCACACTTTCA+GGG 0.482858 4_2:+8789475 None:intergenic
ACCTAAAATTTCATTTCCAA+TGG 0.483236 4_2:+8789248 None:intergenic
TTGCTAGGCCAAGTCTATCA+AGG 0.491645 4_2:+8789166 None:intergenic
GAAGTGATTGTTTCTGAGAC+TGG 0.499216 4_2:-8788817 Msa0587300:CDS
AATTGGGTCTTCATACATGA+TGG 0.501687 4_2:-8786443 Msa0587300:CDS
TGAAGATGGTGGATATGAAT+TGG 0.503779 4_2:+8789101 None:intergenic
TGATTGTTTCTGAGACTGGT+TGG 0.504115 4_2:-8788813 Msa0587300:CDS
GAGACTGGTTGGGCCTCTCA+TGG 0.506281 4_2:-8788802 Msa0587300:CDS
ATGTCTGTCAAAAGTTCGTT+CGG 0.507994 4_2:+8789354 None:intergenic
AAACCTCAATTTGCTTTGCT+AGG 0.509251 4_2:+8789151 None:intergenic
GAGAATTTGAAGCCTGGACC+AGG 0.516130 4_2:-8788640 Msa0587300:CDS
TGGCCTAGCAAAGCAAATTG+AGG 0.526445 4_2:-8789154 Msa0587300:CDS
CATGGTGATGATAATGAAGC+TGG 0.527812 4_2:-8788784 Msa0587300:CDS
TTGAAGGCACTTAGGACTTG+AGG 0.530321 4_2:+8789408 None:intergenic
AGTTTATGTCAATATGTTGA+GGG 0.534313 4_2:+8788965 None:intergenic
CCAGGATCAGAAAGACACTT+TGG 0.537832 4_2:-8788622 Msa0587300:CDS
TCCCTAAATGTACATGAAGA+TGG 0.548834 4_2:+8789087 None:intergenic
TAGTTTATGTCAATATGTTG+AGG 0.553478 4_2:+8788964 None:intergenic
ACCTCATAGGCCTAAAATGT+TGG 0.556828 4_2:-8788692 Msa0587300:CDS
TATAGTGCCCTTGATAGACT+TGG 0.566519 4_2:-8789174 Msa0587300:CDS
GCAAATACAGCTTCTGAATG+TGG 0.566710 4_2:+8789123 None:intergenic
TTCATTATCATCACCATGAG+AGG 0.570975 4_2:+8788789 None:intergenic
AAGTGTGACCACACTTTCAG+GGG 0.586664 4_2:+8789476 None:intergenic
CAAGTCCTAAGTGCCTTCAA+AGG 0.599078 4_2:-8789405 Msa0587300:CDS
TGCTAGGCCAAGTCTATCAA+GGG 0.613695 4_2:+8789167 None:intergenic
CTAAATGTACATGAAGATGG+TGG 0.619425 4_2:+8789090 None:intergenic
TGTAAGAAAACAAATTAGAG+AGG 0.625657 4_2:+8786233 None:intergenic
CCAAAGAAAGAATGAACACG+AGG 0.636038 4_2:+8790240 None:intergenic
TTAGTGTTAACAAATTATGG+AGG 0.643275 4_2:+8786207 None:intergenic
TTATTTAGAAAATTGTTACA+GGG 0.644962 4_2:+8786325 None:intergenic
AGTGTGACCACACTTTCAGG+GGG 0.728288 4_2:+8789477 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr4_2:8789471-8789490 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr4_2:8789471-8789490 None:intergenic 0.0%
!! AATAAATTAAACTTGAAATT+TGG - chr4_2:8786685-8786704 Msa0587300:intron 10.0%
!! ACTTTAATATAAAAATTGTA+AGG + chr4_2:8786841-8786860 None:intergenic 10.0%
!! AATCAAATTTAAAAAATTTG+AGG - chr4_2:8788287-8788306 Msa0587300:intron 10.0%
!! ATCAAATTTAAAAAATTTGA+GGG - chr4_2:8788288-8788307 Msa0587300:intron 10.0%
!! AATCAAATTTAAAAAATTTG+AGG - chr4_2:8788287-8788306 Msa0587300:intron 10.0%
!! ATCAAATTTAAAAAATTTGA+GGG - chr4_2:8788288-8788307 Msa0587300:intron 10.0%
!! AATAAATTAAACTTGAAATT+TGG - chr4_2:8786685-8786704 Msa0587300:intron 10.0%
!! ACTTTAATATAAAAATTGTA+AGG + chr4_2:8786841-8786860 None:intergenic 10.0%
!! AATCAAATTTAAAAAATTTG+AGG - chr4_2:8788287-8788306 Msa0587300:intron 10.0%
!! ATCAAATTTAAAAAATTTGA+GGG - chr4_2:8788288-8788307 Msa0587300:intron 10.0%
!! AATCAAATTTAAAAAATTTG+AGG - chr4_2:8788287-8788306 Msa0587300:intron 10.0%
!! ATCAAATTTAAAAAATTTGA+GGG - chr4_2:8788288-8788307 Msa0587300:intron 10.0%
!!! CTTTCTCAAATTTTTATTAT+AGG + chr4_2:8787767-8787786 None:intergenic 15.0%
!! ATAATAAAAATTTGAGAAAG+AGG - chr4_2:8787767-8787786 Msa0587300:intron 15.0%
!!! TTTTTTAAATTTGATTCTGA+TGG + chr4_2:8788283-8788302 None:intergenic 15.0%
!! TTATTTAGAAAATTGTTACA+GGG + chr4_2:8788560-8788579 None:intergenic 15.0%
!! TTTATTTAGAAAATTGTTAC+AGG + chr4_2:8788561-8788580 None:intergenic 15.0%
!! TTCTAAATAAATTGAATGTA+TGG - chr4_2:8788570-8788589 Msa0587300:intron 15.0%
!!! TTTTTAGTGTTAACAAATTA+TGG + chr4_2:8788683-8788702 None:intergenic 15.0%
!! AACACTAAAAATTGTAATAT+TGG - chr4_2:8788692-8788711 Msa0587300:CDS 15.0%
!!! GATCTTACTTTTTTTTTTTA+AGG + chr4_2:8788790-8788809 None:intergenic 15.0%
!! TAAAATCATAAAATCATACT+GGG + chr4_2:8788833-8788852 None:intergenic 15.0%
!!! ATGATTTTTCTCTTTTATTA+GGG + chr4_2:8788940-8788959 None:intergenic 15.0%
!!! AATGATTTTTCTCTTTTATT+AGG + chr4_2:8788941-8788960 None:intergenic 15.0%
!! TAATAAAAGAGAAAAATCAT+TGG - chr4_2:8788940-8788959 Msa0587300:CDS 15.0%
!! ATAGTACATTAAAGAAAATA+CGG - chr4_2:8789037-8789056 Msa0587300:CDS 15.0%
!!! TTTTTTAAATTTGATTCTGA+TGG + chr4_2:8788283-8788302 None:intergenic 15.0%
!! TTATTTAGAAAATTGTTACA+GGG + chr4_2:8788560-8788579 None:intergenic 15.0%
!! TTTATTTAGAAAATTGTTAC+AGG + chr4_2:8788561-8788580 None:intergenic 15.0%
!! TTCTAAATAAATTGAATGTA+TGG - chr4_2:8788570-8788589 Msa0587300:intron 15.0%
!!! CTTTCTCAAATTTTTATTAT+AGG + chr4_2:8787767-8787786 None:intergenic 15.0%
!! ATAATAAAAATTTGAGAAAG+AGG - chr4_2:8787767-8787786 Msa0587300:intron 15.0%
!!! TTTTTTAAATTTGATTCTGA+TGG + chr4_2:8788283-8788302 None:intergenic 15.0%
!! TTATTTAGAAAATTGTTACA+GGG + chr4_2:8788560-8788579 None:intergenic 15.0%
!! TTTATTTAGAAAATTGTTAC+AGG + chr4_2:8788561-8788580 None:intergenic 15.0%
!! TTCTAAATAAATTGAATGTA+TGG - chr4_2:8788570-8788589 Msa0587300:intron 15.0%
!!! TTTTTAGTGTTAACAAATTA+TGG + chr4_2:8788683-8788702 None:intergenic 15.0%
!! AACACTAAAAATTGTAATAT+TGG - chr4_2:8788692-8788711 Msa0587300:CDS 15.0%
!!! GATCTTACTTTTTTTTTTTA+AGG + chr4_2:8788790-8788809 None:intergenic 15.0%
!! TAAAATCATAAAATCATACT+GGG + chr4_2:8788833-8788852 None:intergenic 15.0%
!!! ATGATTTTTCTCTTTTATTA+GGG + chr4_2:8788940-8788959 None:intergenic 15.0%
!!! AATGATTTTTCTCTTTTATT+AGG + chr4_2:8788941-8788960 None:intergenic 15.0%
!! TAATAAAAGAGAAAAATCAT+TGG - chr4_2:8788940-8788959 Msa0587300:CDS 15.0%
!! ATAGTACATTAAAGAAAATA+CGG - chr4_2:8789037-8789056 Msa0587300:CDS 15.0%
!!! TTTTTTAAATTTGATTCTGA+TGG + chr4_2:8788283-8788302 None:intergenic 15.0%
!! TTATTTAGAAAATTGTTACA+GGG + chr4_2:8788560-8788579 None:intergenic 15.0%
!! TTTATTTAGAAAATTGTTAC+AGG + chr4_2:8788561-8788580 None:intergenic 15.0%
!! TTCTAAATAAATTGAATGTA+TGG - chr4_2:8788570-8788589 Msa0587300:intron 15.0%
!! TGTGAAAAAAATTCCAATAA+AGG + chr4_2:8787463-8787482 None:intergenic 20.0%
!!! TTGGAATTTTTTTCACAAAT+TGG - chr4_2:8787466-8787485 Msa0587300:intron 20.0%
!! TTTGGATTATTTAATCATGA+TGG - chr4_2:8787898-8787917 Msa0587300:intron 20.0%
!! AAAATGTAGAAAGGAAAAAA+TGG + chr4_2:8788006-8788025 None:intergenic 20.0%
!! TACAAAAACAAAATGTAGAA+AGG + chr4_2:8788015-8788034 None:intergenic 20.0%
!! ACATTAAAAAAAACGTCATA+AGG + chr4_2:8788248-8788267 None:intergenic 20.0%
!! TTCTAACAATTATAAATTGC+AGG - chr4_2:8788415-8788434 Msa0587300:intron 20.0%
!! TCTAACAATTATAAATTGCA+GGG - chr4_2:8788416-8788435 Msa0587300:intron 20.0%
!! AAAAAAAAAGTAAGATCACT+CGG - chr4_2:8788793-8788812 Msa0587300:CDS 20.0%
!! CTAAAATCATAAAATCATAC+TGG + chr4_2:8788834-8788853 None:intergenic 20.0%
!! ATAACAAAGATAAGCTAAAA+AGG - chr4_2:8788867-8788886 Msa0587300:CDS 20.0%
!! TAGTACATTAAAGAAAATAC+GGG - chr4_2:8789038-8789057 Msa0587300:CDS 20.0%
!! ACATTAAAAAAAACGTCATA+AGG + chr4_2:8788248-8788267 None:intergenic 20.0%
!! TTCTAACAATTATAAATTGC+AGG - chr4_2:8788415-8788434 Msa0587300:intron 20.0%
!! TCTAACAATTATAAATTGCA+GGG - chr4_2:8788416-8788435 Msa0587300:intron 20.0%
!! TGTGAAAAAAATTCCAATAA+AGG + chr4_2:8787463-8787482 None:intergenic 20.0%
!!! TTGGAATTTTTTTCACAAAT+TGG - chr4_2:8787466-8787485 Msa0587300:intron 20.0%
!! TTTGGATTATTTAATCATGA+TGG - chr4_2:8787898-8787917 Msa0587300:intron 20.0%
!! AAAATGTAGAAAGGAAAAAA+TGG + chr4_2:8788006-8788025 None:intergenic 20.0%
!! TACAAAAACAAAATGTAGAA+AGG + chr4_2:8788015-8788034 None:intergenic 20.0%
!! ACATTAAAAAAAACGTCATA+AGG + chr4_2:8788248-8788267 None:intergenic 20.0%
!! TTCTAACAATTATAAATTGC+AGG - chr4_2:8788415-8788434 Msa0587300:intron 20.0%
!! TCTAACAATTATAAATTGCA+GGG - chr4_2:8788416-8788435 Msa0587300:intron 20.0%
!! AAAAAAAAAGTAAGATCACT+CGG - chr4_2:8788793-8788812 Msa0587300:CDS 20.0%
!! CTAAAATCATAAAATCATAC+TGG + chr4_2:8788834-8788853 None:intergenic 20.0%
!! ATAACAAAGATAAGCTAAAA+AGG - chr4_2:8788867-8788886 Msa0587300:CDS 20.0%
!! TAGTACATTAAAGAAAATAC+GGG - chr4_2:8789038-8789057 Msa0587300:CDS 20.0%
!! ACATTAAAAAAAACGTCATA+AGG + chr4_2:8788248-8788267 None:intergenic 20.0%
!! TTCTAACAATTATAAATTGC+AGG - chr4_2:8788415-8788434 Msa0587300:intron 20.0%
!! TCTAACAATTATAAATTGCA+GGG - chr4_2:8788416-8788435 Msa0587300:intron 20.0%
! CTTTGATGTTTCATAGAAAA+AGG - chr4_2:8786348-8786367 Msa0587300:exon 25.0%
! AGGTACTTATTTGCAATTAA+TGG - chr4_2:8786368-8786387 Msa0587300:CDS 25.0%
! TTATTTGCTTTCTATACCAT+TGG + chr4_2:8786643-8786662 None:intergenic 25.0%
!! ATTTAGTATCTGAAAGTGTA+AGG + chr4_2:8786811-8786830 None:intergenic 25.0%
! TGTACCAAAGAAAAATTTGA+AGG + chr4_2:8786936-8786955 None:intergenic 25.0%
!! TTTTTCTTTGGTACAGTATT+AGG - chr4_2:8786941-8786960 Msa0587300:intron 25.0%
!! TTTTCTTTGGTACAGTATTA+GGG - chr4_2:8786942-8786961 Msa0587300:intron 25.0%
! ATTGTCTTTAATCCAATTCA+TGG + chr4_2:8787194-8787213 None:intergenic 25.0%
! ACCTAAAATTTCATTTCCAA+TGG + chr4_2:8787257-8787276 None:intergenic 25.0%
!! ATTGGAAATGAAATTTTAGG+TGG - chr4_2:8787256-8787275 Msa0587300:intron 25.0%
! GGGTATGCATTTATATAAAA+AGG + chr4_2:8787496-8787515 None:intergenic 25.0%
!!! TATAAATGCATACCCTTTTT+TGG - chr4_2:8787501-8787520 Msa0587300:intron 25.0%
!! CATTTTTATAGGCCAAAAAA+GGG + chr4_2:8787516-8787535 None:intergenic 25.0%
!!! TCATTTTTATAGGCCAAAAA+AGG + chr4_2:8787517-8787536 None:intergenic 25.0%
! AGTTTATGTCAATATGTTGA+GGG + chr4_2:8787540-8787559 None:intergenic 25.0%
! TAGTTTATGTCAATATGTTG+AGG + chr4_2:8787541-8787560 None:intergenic 25.0%
!! GTCATAATGTAGTTTACTTT+TGG + chr4_2:8787599-8787618 None:intergenic 25.0%
!! TATTTTGCATTGGAGAAATT+TGG - chr4_2:8787649-8787668 Msa0587300:intron 25.0%
!! ATTTTGCATTGGAGAAATTT+GGG - chr4_2:8787650-8787669 Msa0587300:intron 25.0%
! CTCTCTACGATAAATAATTA+AGG + chr4_2:8788111-8788130 None:intergenic 25.0%
! TTGTTAGAAATCTTTAAGCA+TGG + chr4_2:8788404-8788423 None:intergenic 25.0%
! AATTATAAATTGCAGGGAAT+TGG - chr4_2:8788422-8788441 Msa0587300:intron 25.0%
! ATTATAAATTGCAGGGAATT+GGG - chr4_2:8788423-8788442 Msa0587300:intron 25.0%
! TGTAAGAAAACAAATTAGAG+AGG + chr4_2:8788654-8788673 None:intergenic 25.0%
! TTAGTGTTAACAAATTATGG+AGG + chr4_2:8788680-8788699 None:intergenic 25.0%
! AGTACATTAAAGAAAATACG+GGG - chr4_2:8789039-8789058 Msa0587300:CDS 25.0%
!! ATGGTGTTTAAAGCTTATTT+GGG + chr4_2:8789452-8789471 None:intergenic 25.0%
!! TATGGTGTTTAAAGCTTATT+TGG + chr4_2:8789453-8789472 None:intergenic 25.0%
! TTGTTAGAAATCTTTAAGCA+TGG + chr4_2:8788404-8788423 None:intergenic 25.0%
! AATTATAAATTGCAGGGAAT+TGG - chr4_2:8788422-8788441 Msa0587300:intron 25.0%
! ATTATAAATTGCAGGGAATT+GGG - chr4_2:8788423-8788442 Msa0587300:intron 25.0%
! TGTAAGAAAACAAATTAGAG+AGG + chr4_2:8788654-8788673 None:intergenic 25.0%
! TTAGTGTTAACAAATTATGG+AGG + chr4_2:8788680-8788699 None:intergenic 25.0%
! CTTTGATGTTTCATAGAAAA+AGG - chr4_2:8786348-8786367 Msa0587300:exon 25.0%
! AGGTACTTATTTGCAATTAA+TGG - chr4_2:8786368-8786387 Msa0587300:CDS 25.0%
! TTATTTGCTTTCTATACCAT+TGG + chr4_2:8786643-8786662 None:intergenic 25.0%
!! ATTTAGTATCTGAAAGTGTA+AGG + chr4_2:8786811-8786830 None:intergenic 25.0%
! TGTACCAAAGAAAAATTTGA+AGG + chr4_2:8786936-8786955 None:intergenic 25.0%
!! TTTTTCTTTGGTACAGTATT+AGG - chr4_2:8786941-8786960 Msa0587300:intron 25.0%
!! TTTTCTTTGGTACAGTATTA+GGG - chr4_2:8786942-8786961 Msa0587300:intron 25.0%
! ATTGTCTTTAATCCAATTCA+TGG + chr4_2:8787194-8787213 None:intergenic 25.0%
! ACCTAAAATTTCATTTCCAA+TGG + chr4_2:8787257-8787276 None:intergenic 25.0%
!! ATTGGAAATGAAATTTTAGG+TGG - chr4_2:8787256-8787275 Msa0587300:intron 25.0%
! GGGTATGCATTTATATAAAA+AGG + chr4_2:8787496-8787515 None:intergenic 25.0%
!!! TATAAATGCATACCCTTTTT+TGG - chr4_2:8787501-8787520 Msa0587300:intron 25.0%
!! CATTTTTATAGGCCAAAAAA+GGG + chr4_2:8787516-8787535 None:intergenic 25.0%
!!! TCATTTTTATAGGCCAAAAA+AGG + chr4_2:8787517-8787536 None:intergenic 25.0%
! AGTTTATGTCAATATGTTGA+GGG + chr4_2:8787540-8787559 None:intergenic 25.0%
! TAGTTTATGTCAATATGTTG+AGG + chr4_2:8787541-8787560 None:intergenic 25.0%
!! GTCATAATGTAGTTTACTTT+TGG + chr4_2:8787599-8787618 None:intergenic 25.0%
!! TATTTTGCATTGGAGAAATT+TGG - chr4_2:8787649-8787668 Msa0587300:intron 25.0%
!! ATTTTGCATTGGAGAAATTT+GGG - chr4_2:8787650-8787669 Msa0587300:intron 25.0%
! CTCTCTACGATAAATAATTA+AGG + chr4_2:8788111-8788130 None:intergenic 25.0%
! TTGTTAGAAATCTTTAAGCA+TGG + chr4_2:8788404-8788423 None:intergenic 25.0%
! AATTATAAATTGCAGGGAAT+TGG - chr4_2:8788422-8788441 Msa0587300:intron 25.0%
! ATTATAAATTGCAGGGAATT+GGG - chr4_2:8788423-8788442 Msa0587300:intron 25.0%
! TGTAAGAAAACAAATTAGAG+AGG + chr4_2:8788654-8788673 None:intergenic 25.0%
! TTAGTGTTAACAAATTATGG+AGG + chr4_2:8788680-8788699 None:intergenic 25.0%
! AGTACATTAAAGAAAATACG+GGG - chr4_2:8789039-8789058 Msa0587300:CDS 25.0%
!! ATGGTGTTTAAAGCTTATTT+GGG + chr4_2:8789452-8789471 None:intergenic 25.0%
!! TATGGTGTTTAAAGCTTATT+TGG + chr4_2:8789453-8789472 None:intergenic 25.0%
! TTGTTAGAAATCTTTAAGCA+TGG + chr4_2:8788404-8788423 None:intergenic 25.0%
! AATTATAAATTGCAGGGAAT+TGG - chr4_2:8788422-8788441 Msa0587300:intron 25.0%
! ATTATAAATTGCAGGGAATT+GGG - chr4_2:8788423-8788442 Msa0587300:intron 25.0%
! TGTAAGAAAACAAATTAGAG+AGG + chr4_2:8788654-8788673 None:intergenic 25.0%
! TTAGTGTTAACAAATTATGG+AGG + chr4_2:8788680-8788699 None:intergenic 25.0%
! TTATCAGCAACATTTTCTCT+AGG - chr4_2:8786294-8786313 Msa0587300:three_prime_UTR 30.0%
AATGGACATTTCTATGATGA+TGG - chr4_2:8786386-8786405 Msa0587300:CDS 30.0%
CATTCATGTAGTCAGTATAT+CGG - chr4_2:8786448-8786467 Msa0587300:CDS 30.0%
! GTGACTATTGACTATTATGA+TGG - chr4_2:8786760-8786779 Msa0587300:intron 30.0%
ATGAATTGCTTTGCATAACA+TGG - chr4_2:8786897-8786916 Msa0587300:intron 30.0%
! AAAGCATTTACTGGAACATA+TGG - chr4_2:8786968-8786987 Msa0587300:intron 30.0%
! ATTTTTGTTCCTGGAAGATA+TGG + chr4_2:8787223-8787242 None:intergenic 30.0%
!!! ATTCCAACTATTTTTGTTCC+TGG + chr4_2:8787232-8787251 None:intergenic 30.0%
AAAATAGTTGGAATTGCCAT+TGG - chr4_2:8787238-8787257 Msa0587300:intron 30.0%
! GCCATTGGAAATGAAATTTT+AGG - chr4_2:8787253-8787272 Msa0587300:intron 30.0%
TGGTGGAAATATTGAAGTTT+GGG - chr4_2:8787276-8787295 Msa0587300:intron 30.0%
!!! CTATAGATATTTTTTGCTGC+AGG + chr4_2:8787313-8787332 None:intergenic 30.0%
ACCATCTTCATGTACATTTA+GGG - chr4_2:8787414-8787433 Msa0587300:intron 30.0%
ACCTTACATGAAACCTTTAT+TGG - chr4_2:8787447-8787466 Msa0587300:intron 30.0%
TCCAATAAAGGTTTCATGTA+AGG + chr4_2:8787451-8787470 None:intergenic 30.0%
!!! ATGTTGAGGGTCATTTTTAT+AGG + chr4_2:8787527-8787546 None:intergenic 30.0%
!! GCTTTATTTAAGAAAAACCC+TGG - chr4_2:8787562-8787581 Msa0587300:intron 30.0%
! GAAATTTGGGTTTGATAAGA+TGG - chr4_2:8787663-8787682 Msa0587300:intron 30.0%
AAGAGGTTACTTAAGAGAAA+AGG - chr4_2:8787784-8787803 Msa0587300:intron 30.0%
! TAAACCCTAACCAACATTTT+AGG + chr4_2:8787823-8787842 None:intergenic 30.0%
!! GGAAGTATTGCATATGATAT+TGG - chr4_2:8787919-8787938 Msa0587300:intron 30.0%
GCATATGATATTGGATTTAC+TGG - chr4_2:8787928-8787947 Msa0587300:intron 30.0%
!! AAATGGATTACATACCTTGA+AGG + chr4_2:8787989-8788008 None:intergenic 30.0%
! GACGAAAATGTTTTCACTAT+AGG + chr4_2:8788183-8788202 None:intergenic 30.0%
GTGTGAGCTATAAATATAGT+TGG + chr4_2:8788332-8788351 None:intergenic 30.0%
GATAAAACCAACCTAAATCA+TGG + chr4_2:8788367-8788386 None:intergenic 30.0%
!! AGCTTTTAAGTAAGATCACT+CGG - chr4_2:8788763-8788782 Msa0587300:CDS 30.0%
ACAAAGATAAGCTAAAAAGG+TGG - chr4_2:8788870-8788889 Msa0587300:CDS 30.0%
CAAAGATAAGCTAAAAAGGT+GGG - chr4_2:8788871-8788890 Msa0587300:CDS 30.0%
!! TACTTGATAGTGAATGTACT+TGG + chr4_2:8788908-8788927 None:intergenic 30.0%
GTACATTAAAGAAAATACGG+GGG - chr4_2:8789040-8789059 Msa0587300:CDS 30.0%
TCTATTCACTGCAATAAGTT+TGG + chr4_2:8789187-8789206 None:intergenic 30.0%
AGTTAGATGAGATTGTCAAA+TGG - chr4_2:8789263-8789282 Msa0587300:CDS 30.0%
GGATAAAGTTTGACAAAGTT+GGG + chr4_2:8789293-8789312 None:intergenic 30.0%
AGGATAAAGTTTGACAAAGT+TGG + chr4_2:8789294-8789313 None:intergenic 30.0%
! AGTATTGAGTGCTTCATTTA+GGG + chr4_2:8789324-8789343 None:intergenic 30.0%
!! AAGTATTGAGTGCTTCATTT+AGG + chr4_2:8789325-8789344 None:intergenic 30.0%
CCTAAAAGTTTAAGCAAGAA+AGG + chr4_2:8789390-8789409 None:intergenic 30.0%
! CCTTTCTTGCTTAAACTTTT+AGG - chr4_2:8789387-8789406 Msa0587300:CDS 30.0%
! TGGTGTTTAAAGCTTATTTG+GGG + chr4_2:8789451-8789470 None:intergenic 30.0%
!!! TGTCTTTTTTCCACTAAAAC+CGG - chr4_2:8789734-8789753 Msa0587300:intron 30.0%
!! AGTCTAGCAACGTTTTATTA+TGG - chr4_2:8789774-8789793 Msa0587300:intron 30.0%
GTGTGAGCTATAAATATAGT+TGG + chr4_2:8788332-8788351 None:intergenic 30.0%
GATAAAACCAACCTAAATCA+TGG + chr4_2:8788367-8788386 None:intergenic 30.0%
AAGCATGGTAGTTATTCATA+AGG + chr4_2:8790009-8790028 None:intergenic 30.0%
! TTATCAGCAACATTTTCTCT+AGG - chr4_2:8786294-8786313 Msa0587300:three_prime_UTR 30.0%
AATGGACATTTCTATGATGA+TGG - chr4_2:8786386-8786405 Msa0587300:CDS 30.0%
CATTCATGTAGTCAGTATAT+CGG - chr4_2:8786448-8786467 Msa0587300:CDS 30.0%
! GTGACTATTGACTATTATGA+TGG - chr4_2:8786760-8786779 Msa0587300:intron 30.0%
ATGAATTGCTTTGCATAACA+TGG - chr4_2:8786897-8786916 Msa0587300:intron 30.0%
! AAAGCATTTACTGGAACATA+TGG - chr4_2:8786968-8786987 Msa0587300:intron 30.0%
! ATTTTTGTTCCTGGAAGATA+TGG + chr4_2:8787223-8787242 None:intergenic 30.0%
!!! ATTCCAACTATTTTTGTTCC+TGG + chr4_2:8787232-8787251 None:intergenic 30.0%
AAAATAGTTGGAATTGCCAT+TGG - chr4_2:8787238-8787257 Msa0587300:intron 30.0%
! GCCATTGGAAATGAAATTTT+AGG - chr4_2:8787253-8787272 Msa0587300:intron 30.0%
TGGTGGAAATATTGAAGTTT+GGG - chr4_2:8787276-8787295 Msa0587300:intron 30.0%
!!! CTATAGATATTTTTTGCTGC+AGG + chr4_2:8787313-8787332 None:intergenic 30.0%
ACCATCTTCATGTACATTTA+GGG - chr4_2:8787414-8787433 Msa0587300:intron 30.0%
ACCTTACATGAAACCTTTAT+TGG - chr4_2:8787447-8787466 Msa0587300:intron 30.0%
TCCAATAAAGGTTTCATGTA+AGG + chr4_2:8787451-8787470 None:intergenic 30.0%
!!! ATGTTGAGGGTCATTTTTAT+AGG + chr4_2:8787527-8787546 None:intergenic 30.0%
!! GCTTTATTTAAGAAAAACCC+TGG - chr4_2:8787562-8787581 Msa0587300:intron 30.0%
! GAAATTTGGGTTTGATAAGA+TGG - chr4_2:8787663-8787682 Msa0587300:intron 30.0%
AAGAGGTTACTTAAGAGAAA+AGG - chr4_2:8787784-8787803 Msa0587300:intron 30.0%
! TAAACCCTAACCAACATTTT+AGG + chr4_2:8787823-8787842 None:intergenic 30.0%
!! GGAAGTATTGCATATGATAT+TGG - chr4_2:8787919-8787938 Msa0587300:intron 30.0%
GCATATGATATTGGATTTAC+TGG - chr4_2:8787928-8787947 Msa0587300:intron 30.0%
!! AAATGGATTACATACCTTGA+AGG + chr4_2:8787989-8788008 None:intergenic 30.0%
! GACGAAAATGTTTTCACTAT+AGG + chr4_2:8788183-8788202 None:intergenic 30.0%
GTGTGAGCTATAAATATAGT+TGG + chr4_2:8788332-8788351 None:intergenic 30.0%
GATAAAACCAACCTAAATCA+TGG + chr4_2:8788367-8788386 None:intergenic 30.0%
!! AGCTTTTAAGTAAGATCACT+CGG - chr4_2:8788763-8788782 Msa0587300:CDS 30.0%
ACAAAGATAAGCTAAAAAGG+TGG - chr4_2:8788870-8788889 Msa0587300:CDS 30.0%
CAAAGATAAGCTAAAAAGGT+GGG - chr4_2:8788871-8788890 Msa0587300:CDS 30.0%
!! TACTTGATAGTGAATGTACT+TGG + chr4_2:8788908-8788927 None:intergenic 30.0%
GTACATTAAAGAAAATACGG+GGG - chr4_2:8789040-8789059 Msa0587300:CDS 30.0%
TCTATTCACTGCAATAAGTT+TGG + chr4_2:8789187-8789206 None:intergenic 30.0%
AGTTAGATGAGATTGTCAAA+TGG - chr4_2:8789263-8789282 Msa0587300:CDS 30.0%
GGATAAAGTTTGACAAAGTT+GGG + chr4_2:8789293-8789312 None:intergenic 30.0%
AGGATAAAGTTTGACAAAGT+TGG + chr4_2:8789294-8789313 None:intergenic 30.0%
! AGTATTGAGTGCTTCATTTA+GGG + chr4_2:8789324-8789343 None:intergenic 30.0%
!! AAGTATTGAGTGCTTCATTT+AGG + chr4_2:8789325-8789344 None:intergenic 30.0%
CCTAAAAGTTTAAGCAAGAA+AGG + chr4_2:8789390-8789409 None:intergenic 30.0%
! CCTTTCTTGCTTAAACTTTT+AGG - chr4_2:8789387-8789406 Msa0587300:CDS 30.0%
! TGGTGTTTAAAGCTTATTTG+GGG + chr4_2:8789451-8789470 None:intergenic 30.0%
!!! TGTCTTTTTTCCACTAAAAC+CGG - chr4_2:8789734-8789753 Msa0587300:intron 30.0%
!! AGTCTAGCAACGTTTTATTA+TGG - chr4_2:8789774-8789793 Msa0587300:intron 30.0%
GTGTGAGCTATAAATATAGT+TGG + chr4_2:8788332-8788351 None:intergenic 30.0%
GATAAAACCAACCTAAATCA+TGG + chr4_2:8788367-8788386 None:intergenic 30.0%
AAGCATGGTAGTTATTCATA+AGG + chr4_2:8790009-8790028 None:intergenic 30.0%
GCTTAGACTTCAACATCAAA+TGG - chr4_2:8786230-8786249 Msa0587300:three_prime_UTR 35.0%
!! TTTCTATGATGATGGTGAGA+TGG - chr4_2:8786394-8786413 Msa0587300:CDS 35.0%
!! TTCTATGATGATGGTGAGAT+GGG - chr4_2:8786395-8786414 Msa0587300:CDS 35.0%
! ATACTGACTACATGAATGTG+TGG + chr4_2:8786446-8786465 None:intergenic 35.0%
!! TACCCACGAAGGTATTAATT+GGG + chr4_2:8786582-8786601 None:intergenic 35.0%
!! TTACCCACGAAGGTATTAAT+TGG + chr4_2:8786583-8786602 None:intergenic 35.0%
CCAACAATTGTTAAATCCTC+AGG + chr4_2:8786612-8786631 None:intergenic 35.0%
CCTGAGGATTTAACAATTGT+TGG - chr4_2:8786609-8786628 Msa0587300:intron 35.0%
ATTGTTGGATCGAAATCCAA+TGG - chr4_2:8786624-8786643 Msa0587300:intron 35.0%
CCAAAGAAAAATTTGAAGGC+AGG + chr4_2:8786932-8786951 None:intergenic 35.0%
! CCTGCCTTCAAATTTTTCTT+TGG - chr4_2:8786929-8786948 Msa0587300:intron 35.0%
! TTAGGGAACAAAGCATTTAC+TGG - chr4_2:8786959-8786978 Msa0587300:intron 35.0%
GGAACATATGGAGTAAACTA+TGG - chr4_2:8786980-8786999 Msa0587300:intron 35.0%
ATGTCTGTCAAAAGTTCGTT+CGG + chr4_2:8787151-8787170 None:intergenic 35.0%
! AACGAACTTTTGACAGACAT+AGG - chr4_2:8787151-8787170 Msa0587300:intron 35.0%
AATGTTCAACCATATCTTCC+AGG - chr4_2:8787211-8787230 Msa0587300:intron 35.0%
CTTCCAGGAACAAAAATAGT+TGG - chr4_2:8787226-8787245 Msa0587300:intron 35.0%
!! GGAAATGAAATTTTAGGTGG+TGG - chr4_2:8787259-8787278 Msa0587300:intron 35.0%
! GTGGTGGAAATATTGAAGTT+TGG - chr4_2:8787275-8787294 Msa0587300:intron 35.0%
! AAACCTCAATTTGCTTTGCT+AGG + chr4_2:8787354-8787373 None:intergenic 35.0%
!! TGAAGATGGTGGATATGAAT+TGG + chr4_2:8787404-8787423 None:intergenic 35.0%
CTAAATGTACATGAAGATGG+TGG + chr4_2:8787415-8787434 None:intergenic 35.0%
CACCATCTTCATGTACATTT+AGG - chr4_2:8787413-8787432 Msa0587300:intron 35.0%
TCCCTAAATGTACATGAAGA+TGG + chr4_2:8787418-8787437 None:intergenic 35.0%
! TTTTGGCATCATAAATGCCA+GGG + chr4_2:8787582-8787601 None:intergenic 35.0%
!!! TGATGCTGCTTATTTTGCAT+TGG - chr4_2:8787639-8787658 Msa0587300:intron 35.0%
TTCATTATCATCACCATGAG+AGG + chr4_2:8787716-8787735 None:intergenic 35.0%
! ATAGGCCTAAAATGTTGGTT+AGG - chr4_2:8787815-8787834 Msa0587300:intron 35.0%
! TAGGCCTAAAATGTTGGTTA+GGG - chr4_2:8787816-8787835 Msa0587300:intron 35.0%
! TTCAATGAGAATTTGAAGCC+TGG - chr4_2:8787856-8787875 Msa0587300:intron 35.0%
GATTACATACCTTGAAGGAA+AGG + chr4_2:8787984-8788003 None:intergenic 35.0%
AGCATACTAGTCCATGATTT+AGG - chr4_2:8788353-8788372 Msa0587300:intron 35.0%
TACTAGTCCATGATTTAGGT+TGG - chr4_2:8788357-8788376 Msa0587300:intron 35.0%
AAGCATGGTAGTTATGCATA+AGG + chr4_2:8788389-8788408 None:intergenic 35.0%
AATTGGGTCTTCATACATGA+TGG - chr4_2:8788439-8788458 Msa0587300:intron 35.0%
! TTGTGTCAAGCATAATTTGC+TGG - chr4_2:8788721-8788740 Msa0587300:CDS 35.0%
! AATAGTGTCGCTCATAACAT+AGG + chr4_2:8789090-8789109 None:intergenic 35.0%
ATTCACTGCAATAAGTTTGG+CGG + chr4_2:8789184-8789203 None:intergenic 35.0%
!! AGATGAAGAGTTGATGATGT+TGG - chr4_2:8789204-8789223 Msa0587300:CDS 35.0%
GTATTGAGTGCTTCATTTAG+GGG + chr4_2:8789323-8789342 None:intergenic 35.0%
CTCTCACTTCACTTTAACAA+AGG + chr4_2:8789425-8789444 None:intergenic 35.0%
GAAATTAAGATTGAGACCAC+AGG + chr4_2:8789638-8789657 None:intergenic 35.0%
TTCCACTAAAACCGGAATTT+AGG - chr4_2:8789742-8789761 Msa0587300:intron 35.0%
AGCATACTAGTCCATGATTT+AGG - chr4_2:8788353-8788372 Msa0587300:intron 35.0%
TACTAGTCCATGATTTAGGT+TGG - chr4_2:8788357-8788376 Msa0587300:intron 35.0%
AATTGGGTCTTCATACATGA+TGG - chr4_2:8788439-8788458 Msa0587300:intron 35.0%
GCTTAGACTTCAACATCAAA+TGG - chr4_2:8786230-8786249 Msa0587300:three_prime_UTR 35.0%
!! TTTCTATGATGATGGTGAGA+TGG - chr4_2:8786394-8786413 Msa0587300:CDS 35.0%
!! TTCTATGATGATGGTGAGAT+GGG - chr4_2:8786395-8786414 Msa0587300:CDS 35.0%
! ATACTGACTACATGAATGTG+TGG + chr4_2:8786446-8786465 None:intergenic 35.0%
!! TACCCACGAAGGTATTAATT+GGG + chr4_2:8786582-8786601 None:intergenic 35.0%
!! TTACCCACGAAGGTATTAAT+TGG + chr4_2:8786583-8786602 None:intergenic 35.0%
CCAACAATTGTTAAATCCTC+AGG + chr4_2:8786612-8786631 None:intergenic 35.0%
CCTGAGGATTTAACAATTGT+TGG - chr4_2:8786609-8786628 Msa0587300:intron 35.0%
ATTGTTGGATCGAAATCCAA+TGG - chr4_2:8786624-8786643 Msa0587300:intron 35.0%
CCAAAGAAAAATTTGAAGGC+AGG + chr4_2:8786932-8786951 None:intergenic 35.0%
! CCTGCCTTCAAATTTTTCTT+TGG - chr4_2:8786929-8786948 Msa0587300:intron 35.0%
! TTAGGGAACAAAGCATTTAC+TGG - chr4_2:8786959-8786978 Msa0587300:intron 35.0%
GGAACATATGGAGTAAACTA+TGG - chr4_2:8786980-8786999 Msa0587300:intron 35.0%
ATGTCTGTCAAAAGTTCGTT+CGG + chr4_2:8787151-8787170 None:intergenic 35.0%
! AACGAACTTTTGACAGACAT+AGG - chr4_2:8787151-8787170 Msa0587300:intron 35.0%
AATGTTCAACCATATCTTCC+AGG - chr4_2:8787211-8787230 Msa0587300:intron 35.0%
CTTCCAGGAACAAAAATAGT+TGG - chr4_2:8787226-8787245 Msa0587300:intron 35.0%
!! GGAAATGAAATTTTAGGTGG+TGG - chr4_2:8787259-8787278 Msa0587300:intron 35.0%
! GTGGTGGAAATATTGAAGTT+TGG - chr4_2:8787275-8787294 Msa0587300:intron 35.0%
! AAACCTCAATTTGCTTTGCT+AGG + chr4_2:8787354-8787373 None:intergenic 35.0%
!! TGAAGATGGTGGATATGAAT+TGG + chr4_2:8787404-8787423 None:intergenic 35.0%
CTAAATGTACATGAAGATGG+TGG + chr4_2:8787415-8787434 None:intergenic 35.0%
CACCATCTTCATGTACATTT+AGG - chr4_2:8787413-8787432 Msa0587300:intron 35.0%
TCCCTAAATGTACATGAAGA+TGG + chr4_2:8787418-8787437 None:intergenic 35.0%
! TTTTGGCATCATAAATGCCA+GGG + chr4_2:8787582-8787601 None:intergenic 35.0%
!!! TGATGCTGCTTATTTTGCAT+TGG - chr4_2:8787639-8787658 Msa0587300:intron 35.0%
TTCATTATCATCACCATGAG+AGG + chr4_2:8787716-8787735 None:intergenic 35.0%
! ATAGGCCTAAAATGTTGGTT+AGG - chr4_2:8787815-8787834 Msa0587300:intron 35.0%
! TAGGCCTAAAATGTTGGTTA+GGG - chr4_2:8787816-8787835 Msa0587300:intron 35.0%
! TTCAATGAGAATTTGAAGCC+TGG - chr4_2:8787856-8787875 Msa0587300:intron 35.0%
GATTACATACCTTGAAGGAA+AGG + chr4_2:8787984-8788003 None:intergenic 35.0%
AGCATACTAGTCCATGATTT+AGG - chr4_2:8788353-8788372 Msa0587300:intron 35.0%
TACTAGTCCATGATTTAGGT+TGG - chr4_2:8788357-8788376 Msa0587300:intron 35.0%
AAGCATGGTAGTTATGCATA+AGG + chr4_2:8788389-8788408 None:intergenic 35.0%
AATTGGGTCTTCATACATGA+TGG - chr4_2:8788439-8788458 Msa0587300:intron 35.0%
! TTGTGTCAAGCATAATTTGC+TGG - chr4_2:8788721-8788740 Msa0587300:CDS 35.0%
! AATAGTGTCGCTCATAACAT+AGG + chr4_2:8789090-8789109 None:intergenic 35.0%
ATTCACTGCAATAAGTTTGG+CGG + chr4_2:8789184-8789203 None:intergenic 35.0%
!! AGATGAAGAGTTGATGATGT+TGG - chr4_2:8789204-8789223 Msa0587300:CDS 35.0%
GTATTGAGTGCTTCATTTAG+GGG + chr4_2:8789323-8789342 None:intergenic 35.0%
CTCTCACTTCACTTTAACAA+AGG + chr4_2:8789425-8789444 None:intergenic 35.0%
GAAATTAAGATTGAGACCAC+AGG + chr4_2:8789638-8789657 None:intergenic 35.0%
TTCCACTAAAACCGGAATTT+AGG - chr4_2:8789742-8789761 Msa0587300:intron 35.0%
AGCATACTAGTCCATGATTT+AGG - chr4_2:8788353-8788372 Msa0587300:intron 35.0%
TACTAGTCCATGATTTAGGT+TGG - chr4_2:8788357-8788376 Msa0587300:intron 35.0%
AATTGGGTCTTCATACATGA+TGG - chr4_2:8788439-8788458 Msa0587300:intron 35.0%
CCAAAGAAAGAATGAACACG+AGG + chr4_2:8786265-8786284 None:intergenic 40.0%
CCTCGTGTTCATTCTTTCTT+TGG - chr4_2:8786262-8786281 Msa0587300:three_prime_UTR 40.0%
! CAGCAACATTTTCTCTAGGT+AGG - chr4_2:8786298-8786317 Msa0587300:three_prime_UTR 40.0%
AGAATCTCTCGAATTTCCTG+CGG - chr4_2:8786484-8786503 Msa0587300:intron 40.0%
GAATCTGGTGAAATTTCCGT+AGG - chr4_2:8786518-8786537 Msa0587300:intron 40.0%
ACTCCCAATTAATACCTTCG+TGG - chr4_2:8786576-8786595 Msa0587300:intron 40.0%
CTCCCAATTAATACCTTCGT+GGG - chr4_2:8786577-8786596 Msa0587300:intron 40.0%
ATCGTTAGATCGACATCAGA+CGG + chr4_2:8786712-8786731 None:intergenic 40.0%
TCCTATTCCAGATCCTTTGA+AGG + chr4_2:8787113-8787132 None:intergenic 40.0%
TATAGTGCCCTTGATAGACT+TGG - chr4_2:8787328-8787347 Msa0587300:intron 40.0%
GCAAATACAGCTTCTGAATG+TGG + chr4_2:8787382-8787401 None:intergenic 40.0%
! CTTTTGGCATCATAAATGCC+AGG + chr4_2:8787583-8787602 None:intergenic 40.0%
!! GAAGTGATTGTTTCTGAGAC+TGG - chr4_2:8787685-8787704 Msa0587300:intron 40.0%
!! TGATTGTTTCTGAGACTGGT+TGG - chr4_2:8787689-8787708 Msa0587300:intron 40.0%
!! GATTGTTTCTGAGACTGGTT+GGG - chr4_2:8787690-8787709 Msa0587300:intron 40.0%
! CATGGTGATGATAATGAAGC+TGG - chr4_2:8787718-8787737 Msa0587300:intron 40.0%
AGAGAAAAGGAACACCTCAT+AGG - chr4_2:8787797-8787816 Msa0587300:intron 40.0%
ACCTCATAGGCCTAAAATGT+TGG - chr4_2:8787810-8787829 Msa0587300:intron 40.0%
! ACCAACATTTTAGGCCTATG+AGG + chr4_2:8787814-8787833 None:intergenic 40.0%
TACCTTGAAGGAAAGGAAAG+AGG + chr4_2:8787977-8787996 None:intergenic 40.0%
! TTTCTAGCGTGTGTAATTGG+AGG + chr4_2:8789119-8789138 None:intergenic 40.0%
! GACTTTCTAGCGTGTGTAAT+TGG + chr4_2:8789122-8789141 None:intergenic 40.0%
GCGACATTGTATCAGTATGT+AGG + chr4_2:8789162-8789181 None:intergenic 40.0%
GCTTCATTTAGGGGAGAATA+AGG + chr4_2:8789314-8789333 None:intergenic 40.0%
!! CACCTAAATTCCGGTTTTAG+TGG + chr4_2:8789747-8789766 None:intergenic 40.0%
CTGCTCAATCACCTAAATTC+CGG + chr4_2:8789756-8789775 None:intergenic 40.0%
CCAAAGAAAGAATGAACACG+AGG + chr4_2:8786265-8786284 None:intergenic 40.0%
CCTCGTGTTCATTCTTTCTT+TGG - chr4_2:8786262-8786281 Msa0587300:three_prime_UTR 40.0%
! CAGCAACATTTTCTCTAGGT+AGG - chr4_2:8786298-8786317 Msa0587300:three_prime_UTR 40.0%
AGAATCTCTCGAATTTCCTG+CGG - chr4_2:8786484-8786503 Msa0587300:intron 40.0%
GAATCTGGTGAAATTTCCGT+AGG - chr4_2:8786518-8786537 Msa0587300:intron 40.0%
ACTCCCAATTAATACCTTCG+TGG - chr4_2:8786576-8786595 Msa0587300:intron 40.0%
CTCCCAATTAATACCTTCGT+GGG - chr4_2:8786577-8786596 Msa0587300:intron 40.0%
ATCGTTAGATCGACATCAGA+CGG + chr4_2:8786712-8786731 None:intergenic 40.0%
TCCTATTCCAGATCCTTTGA+AGG + chr4_2:8787113-8787132 None:intergenic 40.0%
TATAGTGCCCTTGATAGACT+TGG - chr4_2:8787328-8787347 Msa0587300:intron 40.0%
GCAAATACAGCTTCTGAATG+TGG + chr4_2:8787382-8787401 None:intergenic 40.0%
! CTTTTGGCATCATAAATGCC+AGG + chr4_2:8787583-8787602 None:intergenic 40.0%
!! GAAGTGATTGTTTCTGAGAC+TGG - chr4_2:8787685-8787704 Msa0587300:intron 40.0%
!! TGATTGTTTCTGAGACTGGT+TGG - chr4_2:8787689-8787708 Msa0587300:intron 40.0%
!! GATTGTTTCTGAGACTGGTT+GGG - chr4_2:8787690-8787709 Msa0587300:intron 40.0%
! CATGGTGATGATAATGAAGC+TGG - chr4_2:8787718-8787737 Msa0587300:intron 40.0%
AGAGAAAAGGAACACCTCAT+AGG - chr4_2:8787797-8787816 Msa0587300:intron 40.0%
ACCTCATAGGCCTAAAATGT+TGG - chr4_2:8787810-8787829 Msa0587300:intron 40.0%
! ACCAACATTTTAGGCCTATG+AGG + chr4_2:8787814-8787833 None:intergenic 40.0%
TACCTTGAAGGAAAGGAAAG+AGG + chr4_2:8787977-8787996 None:intergenic 40.0%
! TTTCTAGCGTGTGTAATTGG+AGG + chr4_2:8789119-8789138 None:intergenic 40.0%
! GACTTTCTAGCGTGTGTAAT+TGG + chr4_2:8789122-8789141 None:intergenic 40.0%
GCGACATTGTATCAGTATGT+AGG + chr4_2:8789162-8789181 None:intergenic 40.0%
GCTTCATTTAGGGGAGAATA+AGG + chr4_2:8789314-8789333 None:intergenic 40.0%
!! CACCTAAATTCCGGTTTTAG+TGG + chr4_2:8789747-8789766 None:intergenic 40.0%
CTGCTCAATCACCTAAATTC+CGG + chr4_2:8789756-8789775 None:intergenic 40.0%
! ATTTCCTGCGGATTTTCCTG+CGG - chr4_2:8786496-8786515 Msa0587300:intron 45.0%
GAAATTTCACCAGATTCCGC+AGG + chr4_2:8786515-8786534 None:intergenic 45.0%
TAATCCTCAGCAAAATCCGC+AGG + chr4_2:8786554-8786573 None:intergenic 45.0%
CAGGAAACAATTACCCACGA+AGG + chr4_2:8786593-8786612 None:intergenic 45.0%
TCGTGGGTAATTGTTTCCTG+AGG - chr4_2:8786593-8786612 Msa0587300:intron 45.0%
TATTCACGCAGTCAGCACAT+CGG + chr4_2:8786737-8786756 None:intergenic 45.0%
AAGTGTGACCACACTTTCAG+GGG + chr4_2:8787029-8787048 None:intergenic 45.0%
GAAGTGTGACCACACTTTCA+GGG + chr4_2:8787030-8787049 None:intergenic 45.0%
! AGAAGTGTGACCACACTTTC+AGG + chr4_2:8787031-8787050 None:intergenic 45.0%
!! TTGAAGGCACTTAGGACTTG+AGG + chr4_2:8787097-8787116 None:intergenic 45.0%
CAAGTCCTAAGTGCCTTCAA+AGG - chr4_2:8787097-8787116 Msa0587300:intron 45.0%
!! CAGATCCTTTGAAGGCACTT+AGG + chr4_2:8787105-8787124 None:intergenic 45.0%
CTAAGTGCCTTCAAAGGATC+TGG - chr4_2:8787103-8787122 Msa0587300:intron 45.0%
! GCCTTCAAAGGATCTGGAAT+AGG - chr4_2:8787109-8787128 Msa0587300:intron 45.0%
! CTTTTGACAGACATAGGCGT+AGG - chr4_2:8787157-8787176 Msa0587300:intron 45.0%
TGCTAGGCCAAGTCTATCAA+GGG + chr4_2:8787338-8787357 None:intergenic 45.0%
TTGCTAGGCCAAGTCTATCA+AGG + chr4_2:8787339-8787358 None:intergenic 45.0%
TGGCCTAGCAAAGCAAATTG+AGG - chr4_2:8787348-8787367 Msa0587300:intron 45.0%
! CCAAAGTGTCTTTCTGATCC+TGG + chr4_2:8787883-8787902 None:intergenic 45.0%
CCAGGATCAGAAAGACACTT+TGG - chr4_2:8787880-8787899 Msa0587300:intron 45.0%
CTTGAAGGAAAGGAAAGAGG+AGG + chr4_2:8787974-8787993 None:intergenic 45.0%
CTCCTCTTTCCTTTCCTTCA+AGG - chr4_2:8787972-8787991 Msa0587300:intron 45.0%
! ATTTCCTGCGGATTTTCCTG+CGG - chr4_2:8786496-8786515 Msa0587300:intron 45.0%
GAAATTTCACCAGATTCCGC+AGG + chr4_2:8786515-8786534 None:intergenic 45.0%
TAATCCTCAGCAAAATCCGC+AGG + chr4_2:8786554-8786573 None:intergenic 45.0%
CAGGAAACAATTACCCACGA+AGG + chr4_2:8786593-8786612 None:intergenic 45.0%
TCGTGGGTAATTGTTTCCTG+AGG - chr4_2:8786593-8786612 Msa0587300:intron 45.0%
TATTCACGCAGTCAGCACAT+CGG + chr4_2:8786737-8786756 None:intergenic 45.0%
AAGTGTGACCACACTTTCAG+GGG + chr4_2:8787029-8787048 None:intergenic 45.0%
GAAGTGTGACCACACTTTCA+GGG + chr4_2:8787030-8787049 None:intergenic 45.0%
! AGAAGTGTGACCACACTTTC+AGG + chr4_2:8787031-8787050 None:intergenic 45.0%
!! TTGAAGGCACTTAGGACTTG+AGG + chr4_2:8787097-8787116 None:intergenic 45.0%
CAAGTCCTAAGTGCCTTCAA+AGG - chr4_2:8787097-8787116 Msa0587300:intron 45.0%
!! CAGATCCTTTGAAGGCACTT+AGG + chr4_2:8787105-8787124 None:intergenic 45.0%
CTAAGTGCCTTCAAAGGATC+TGG - chr4_2:8787103-8787122 Msa0587300:intron 45.0%
! GCCTTCAAAGGATCTGGAAT+AGG - chr4_2:8787109-8787128 Msa0587300:intron 45.0%
! CTTTTGACAGACATAGGCGT+AGG - chr4_2:8787157-8787176 Msa0587300:intron 45.0%
TGCTAGGCCAAGTCTATCAA+GGG + chr4_2:8787338-8787357 None:intergenic 45.0%
TTGCTAGGCCAAGTCTATCA+AGG + chr4_2:8787339-8787358 None:intergenic 45.0%
TGGCCTAGCAAAGCAAATTG+AGG - chr4_2:8787348-8787367 Msa0587300:intron 45.0%
! CCAAAGTGTCTTTCTGATCC+TGG + chr4_2:8787883-8787902 None:intergenic 45.0%
CCAGGATCAGAAAGACACTT+TGG - chr4_2:8787880-8787899 Msa0587300:intron 45.0%
CTTGAAGGAAAGGAAAGAGG+AGG + chr4_2:8787974-8787993 None:intergenic 45.0%
CTCCTCTTTCCTTTCCTTCA+AGG - chr4_2:8787972-8787991 Msa0587300:intron 45.0%
!! AATACAAAAAATAAAAAAAT+TGG + chr4_2:8789361-8789380 None:intergenic 5.0%
!!! TTTTTTTTTTTTGAAATATA+TGG - chr4_2:8789580-8789599 Msa0587300:intron 5.0%
!! AATACAAAAAATAAAAAAAT+TGG + chr4_2:8789361-8789380 None:intergenic 5.0%
!!! TTTTTTTTTTTTGAAATATA+TGG - chr4_2:8789580-8789599 Msa0587300:intron 5.0%
!! CGCAGGAAAGGTGTTTCCTA+CGG + chr4_2:8786537-8786556 None:intergenic 50.0%
CGTAGGAAACACCTTTCCTG+CGG - chr4_2:8786535-8786554 Msa0587300:intron 50.0%
CTCAGCAAAATCCGCAGGAA+AGG + chr4_2:8786549-8786568 None:intergenic 50.0%
! CTTTCCTGCGGATTTTGCTG+AGG - chr4_2:8786547-8786566 Msa0587300:intron 50.0%
AGTGTGACCACACTTTCAGG+GGG + chr4_2:8787028-8787047 None:intergenic 50.0%
! GAGAATTTGAAGCCTGGACC+AGG - chr4_2:8787862-8787881 Msa0587300:intron 50.0%
TGTCTTTCTGATCCTGGTCC+AGG + chr4_2:8787877-8787896 None:intergenic 50.0%
AAAGAGGAGGTTGCTGAGGA+AGG + chr4_2:8787961-8787980 None:intergenic 50.0%
AAGGAAAGAGGAGGTTGCTG+AGG + chr4_2:8787965-8787984 None:intergenic 50.0%
GAGACGCATATAAGCTCCTC+TGG - chr4_2:8789604-8789623 Msa0587300:intron 50.0%
!! CGCAGGAAAGGTGTTTCCTA+CGG + chr4_2:8786537-8786556 None:intergenic 50.0%
CGTAGGAAACACCTTTCCTG+CGG - chr4_2:8786535-8786554 Msa0587300:intron 50.0%
CTCAGCAAAATCCGCAGGAA+AGG + chr4_2:8786549-8786568 None:intergenic 50.0%
! CTTTCCTGCGGATTTTGCTG+AGG - chr4_2:8786547-8786566 Msa0587300:intron 50.0%
AGTGTGACCACACTTTCAGG+GGG + chr4_2:8787028-8787047 None:intergenic 50.0%
! GAGAATTTGAAGCCTGGACC+AGG - chr4_2:8787862-8787881 Msa0587300:intron 50.0%
TGTCTTTCTGATCCTGGTCC+AGG + chr4_2:8787877-8787896 None:intergenic 50.0%
AAAGAGGAGGTTGCTGAGGA+AGG + chr4_2:8787961-8787980 None:intergenic 50.0%
AAGGAAAGAGGAGGTTGCTG+AGG + chr4_2:8787965-8787984 None:intergenic 50.0%
GAGACGCATATAAGCTCCTC+TGG - chr4_2:8789604-8789623 Msa0587300:intron 50.0%
GATTCCGCAGGAAAATCCGC+AGG + chr4_2:8786503-8786522 None:intergenic 55.0%
! GCGGATTTTCCTGCGGAATC+TGG - chr4_2:8786503-8786522 Msa0587300:intron 55.0%
TCTACCTCCCCCTGAAAGTG+TGG - chr4_2:8787018-8787037 Msa0587300:intron 55.0%
GCGAAGATCGCGCCATGAAT+TGG - chr4_2:8787179-8787198 Msa0587300:intron 55.0%
ACGGGGGCTTGTGTGAGAAT+AGG - chr4_2:8789056-8789075 Msa0587300:CDS 55.0%
TCCTCTGGTAGAGCAACCTG+TGG - chr4_2:8789619-8789638 Msa0587300:intron 55.0%
ACCACAGGTTGCTCTACCAG+AGG + chr4_2:8789623-8789642 None:intergenic 55.0%
GATTCCGCAGGAAAATCCGC+AGG + chr4_2:8786503-8786522 None:intergenic 55.0%
! GCGGATTTTCCTGCGGAATC+TGG - chr4_2:8786503-8786522 Msa0587300:intron 55.0%
TCTACCTCCCCCTGAAAGTG+TGG - chr4_2:8787018-8787037 Msa0587300:intron 55.0%
GCGAAGATCGCGCCATGAAT+TGG - chr4_2:8787179-8787198 Msa0587300:intron 55.0%
ACGGGGGCTTGTGTGAGAAT+AGG - chr4_2:8789056-8789075 Msa0587300:CDS 55.0%
TCCTCTGGTAGAGCAACCTG+TGG - chr4_2:8789619-8789638 Msa0587300:intron 55.0%
ACCACAGGTTGCTCTACCAG+AGG + chr4_2:8789623-8789642 None:intergenic 55.0%
GTGACCACACTTTCAGGGGG+AGG + chr4_2:8787025-8787044 None:intergenic 60.0%
! GAGACTGGTTGGGCCTCTCA+TGG - chr4_2:8787700-8787719 Msa0587300:intron 60.0%
GTGACCACACTTTCAGGGGG+AGG + chr4_2:8787025-8787044 None:intergenic 60.0%
! GAGACTGGTTGGGCCTCTCA+TGG - chr4_2:8787700-8787719 Msa0587300:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 8786205 8790319 8786205 ID=Msa0587300;Name=Msa0587300
chr4_2 mRNA 8786205 8790319 8786205 ID=Msa0587300-mRNA-1;Parent=Msa0587300;Name=Msa0587300-mRNA-1;_AED=0.11;_eAED=0.11;_QI=23|0.5|0.66|1|0.5|0.66|3|144|390
chr4_2 exon 8786205 8786467 8786205 ID=Msa0587300-mRNA-1:exon:2441;Parent=Msa0587300-mRNA-1
chr4_2 exon 8788602 8789567 8788602 ID=Msa0587300-mRNA-1:exon:2440;Parent=Msa0587300-mRNA-1
chr4_2 exon 8790209 8790319 8790209 ID=Msa0587300-mRNA-1:exon:2439;Parent=Msa0587300-mRNA-1
chr4_2 five_prime_UTR 8790297 8790319 8790297 ID=Msa0587300-mRNA-1:five_prime_utr;Parent=Msa0587300-mRNA-1
chr4_2 CDS 8790209 8790296 8790209 ID=Msa0587300-mRNA-1:cds;Parent=Msa0587300-mRNA-1
chr4_2 CDS 8788602 8789567 8788602 ID=Msa0587300-mRNA-1:cds;Parent=Msa0587300-mRNA-1
chr4_2 CDS 8786349 8786467 8786349 ID=Msa0587300-mRNA-1:cds;Parent=Msa0587300-mRNA-1
chr4_2 three_prime_UTR 8786205 8786348 8786205 ID=Msa0587300-mRNA-1:three_prime_utr;Parent=Msa0587300-mRNA-1
Gene Sequence

>Msa0587300

ATGCTTAGACTTCAACATCAAATGGTTCTCTCTTCCTCGTGTTCATTCTTTCTTTGGCTTCTCATTTTATCAGCAACATTTTCTCTAGTATTAGGGAACAAAGCATTTACTGGAACATATGGAGTAAACTATGGTAGAGTAGCTGATAATCTACCTCCCCCTGAAAGTGTGGTCACACTTCTCAAAGCTGCAAAAATCAAGAATGTAAGAATCTATGATGTTAATCCTCAAGTCCTAAGTGCCTTCAAAGGATCTGGAATAGGACTTAGTGTTTGTCTTCCGAACGAACTTTTGACAGACATAGGCGTAGGCGAAGATCGCGCCATGAATTGGATTAAAGACAATGTTCAACCATATCTTCCAGGAACAAAAATAGTTGGAATTGCCATTGGAAATGAAATTTTAGGTGGTGGAAATATTGAAGTTTGGGAAGCTTTGCTTCCTGCAGCAAAAAATATCTATAGTGCCCTTGATAGACTTGGCCTAGCAAAGCAAATTGAGGTTTCAACTCCACATTCAGAAGCTGTATTTGCCAATTCATATCCACCATCTTCATGTACATTTAGGGATGATATAGTACCTTACATGAAACCTTTATTGGAATTTTTTTCACAAATTGGAACACCTTTTTATATAAATGCATACCCTTTTTTGGCCTATAAAAATGACCCTCAACATATTGACATAAACTATGCTTTATTTAAGAAAAACCCTGGCATTTATGATGCCAAAAGTAAACTACATTATGACAATATGTTTGATGCACAAGTTGATGCTGCTTATTTTGCATTGGAGAAATTTGGGTTTGATAAGATGGAAGTGATTGTTTCTGAGACTGGTTGGGCCTCTCATGGTGATGATAATGAAGCTGGAGCAACTGTGAAAAATGCAAAGACCTATAATAAAAATTTGAGAAAGAGGTTACTTAAGAGAAAAGGAACACCTCATAGGCCTAAAATGTTGGTTAGGGTTTATATATTTGCTTTGTTCAATGAGAATTTGAAGCCTGGACCAGGATCAGAAAGACACTTTGGATTATTTAATCATGATGGAAGGAATTGGGTCTTCATACATGATGGTTTCTTCAAGTTGTGTTGCAATTCTTCTTCTTCTTATAGCATTGTAATCAGTCAAAAGATTGTAGATACAAGAACTGAGTTAACGATTCTTTGA
Protein sequence

>Msa0587300

MLRLQHQMVLSSSCSFFLWLLILSATFSLVLGNKAFTGTYGVNYGRVADNLPPPESVVTLLKAAKIKNVRIYDVNPQVLSAFKGSGIGLSVCLPNELLTDIGVGEDRAMNWIKDNVQPYLPGTKIVGIAIGNEILGGGNIEVWEALLPAAKNIYSALDRLGLAKQIEVSTPHSEAVFANSYPPSSCTFRDDIVPYMKPLLEFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKSKLHYDNMFDAQVDAAYFALEKFGFDKMEVIVSETGWASHGDDNEAGATVKNAKTYNKNLRKRLLKRKGTPHRPKMLVRVYIFALFNENLKPGPGSERHFGLFNHDGRNWVFIHDGFFKLCCNSSSSYSIVISQKIVDTRTELTIL*