AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0622110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622110 MtrunA17_Chr7g0272151 92.264 349 8 5 294 624 5 352 0.0 627
Msa0622110 MtrunA17_Chr7g0272151 98.198 111 2 0 624 734 483 593 1.97e-74 252
Msa0622110 MtrunA17_Chr7g0272151 27.679 336 190 13 28 335 65 375 1.60e-24 108
Msa0622110 MtrunA17_Chr7g0272141 89.264 326 7 3 1 298 1 326 0.0 582
Msa0622110 MtrunA17_Chr7g0272141 30.116 259 169 5 373 624 69 322 3.42e-27 116
Msa0622110 MtrunA17_Chr7g0272141 40.000 100 56 2 625 723 445 541 1.01e-19 93.6
Msa0622110 MtrunA17_Chr1g0192321 57.183 355 121 8 295 624 5 353 2.32e-124 383
Msa0622110 MtrunA17_Chr1g0192321 56.296 135 52 2 600 727 452 586 2.40e-46 174
Msa0622110 MtrunA17_Chr1g0192321 26.667 360 213 13 28 359 62 398 5.26e-26 113
Msa0622110 MtrunA17_Chr1g0192301 53.429 350 135 10 294 624 4 344 6.53e-109 343
Msa0622110 MtrunA17_Chr1g0192301 54.054 111 47 1 624 734 475 581 1.38e-35 142
Msa0622110 MtrunA17_Chr1g0192301 32.197 264 146 9 84 335 125 367 1.30e-25 112
Msa0622110 MtrunA17_Chr1g0192311 53.757 346 133 10 295 624 5 339 1.22e-107 340
Msa0622110 MtrunA17_Chr1g0192311 58.586 99 41 0 624 722 470 568 1.22e-36 145
Msa0622110 MtrunA17_Chr1g0192311 27.168 346 213 11 28 359 64 384 5.45e-26 113
Msa0622110 MtrunA17_Chr1g0192281 53.757 346 133 10 295 624 5 339 1.22e-107 340
Msa0622110 MtrunA17_Chr1g0192281 58.586 99 41 0 624 722 470 568 1.22e-36 145
Msa0622110 MtrunA17_Chr1g0192281 27.168 346 213 11 28 359 64 384 5.45e-26 113
Msa0622110 MtrunA17_Chr4g0000121 52.994 334 129 10 310 624 2 326 4.10e-100 319
Msa0622110 MtrunA17_Chr4g0000121 57.576 99 42 0 624 722 457 555 3.09e-36 144
Msa0622110 MtrunA17_Chr4g0000121 31.724 290 163 11 82 359 105 371 3.90e-26 113
Msa0622110 MtrunA17_Chr4g0067611 42.941 340 164 9 300 624 15 339 5.60e-68 234
Msa0622110 MtrunA17_Chr4g0067611 44.248 113 54 2 623 729 468 577 2.55e-25 111
Msa0622110 MtrunA17_Chr4g0067611 29.046 241 149 6 70 293 103 338 1.22e-24 108
Msa0622110 MtrunA17_Chr2g0295551 40.841 333 170 8 300 622 14 329 8.08e-67 231
Msa0622110 MtrunA17_Chr2g0295551 25.758 330 217 9 2 306 17 343 5.00e-27 116
Msa0622110 MtrunA17_Chr2g0295551 47.273 110 49 2 620 723 457 563 6.54e-25 109
Msa0622110 MtrunA17_Chr4g0067601 41.566 332 176 7 300 622 15 337 8.44e-63 220
Msa0622110 MtrunA17_Chr4g0067601 31.557 244 141 7 70 294 103 339 4.10e-26 113
Msa0622110 MtrunA17_Chr4g0067601 45.133 113 53 2 623 729 468 577 1.45e-25 112
Msa0622110 MtrunA17_Chr2g0295541 39.339 333 175 9 300 622 14 329 6.77e-61 215
Msa0622110 MtrunA17_Chr2g0295541 27.778 288 189 6 70 341 100 384 5.55e-28 119
Msa0622110 MtrunA17_Chr2g0295541 45.455 110 51 2 620 723 488 594 2.04e-23 105
Msa0622110 MtrunA17_Chr2g0295531 36.982 338 170 8 294 622 8 311 1.19e-56 204
Msa0622110 MtrunA17_Chr2g0295531 30.126 239 149 5 70 299 89 318 7.73e-28 119
Msa0622110 MtrunA17_Chr2g0295531 49.074 108 46 2 623 724 442 546 5.48e-27 116
Msa0622110 MtrunA17_Chr8g0354901 36.676 349 194 9 297 628 23 361 8.04e-49 181
Msa0622110 MtrunA17_Chr8g0354901 37.179 234 125 5 79 299 138 362 3.83e-34 138
Msa0622110 MtrunA17_Chr8g0354901 47.191 89 44 1 625 713 485 570 3.05e-22 101
Msa0622110 MtrunA17_Chr3g0080391 35.117 299 171 8 342 628 67 354 5.81e-43 164
Msa0622110 MtrunA17_Chr3g0080391 34.583 240 117 5 82 299 134 355 4.17e-32 132
Msa0622110 MtrunA17_Chr3g0080391 43.750 96 51 1 625 720 478 570 1.50e-21 99.4
Msa0622110 MtrunA17_Chr1g0194081 33.123 317 183 11 332 627 31 339 1.00e-41 160
Msa0622110 MtrunA17_Chr1g0194081 34.454 238 122 7 82 293 106 335 3.65e-32 132
Msa0622110 MtrunA17_Chr1g0194081 44.660 103 53 2 624 726 467 565 1.75e-23 105
Msa0622110 MtrunA17_Chr4g0069891 31.844 358 211 12 296 627 19 369 7.20e-41 158
Msa0622110 MtrunA17_Chr4g0069891 31.773 299 163 13 73 353 130 405 1.98e-30 127
Msa0622110 MtrunA17_Chr4g0069891 39.474 114 65 2 613 726 486 595 5.08e-18 88.6
Msa0622110 MtrunA17_Chr4g0069861 35.227 264 145 6 76 335 70 311 2.78e-40 155
Msa0622110 MtrunA17_Chr4g0069861 38.525 122 67 3 605 725 404 518 6.58e-20 94.0
Msa0622110 MtrunA17_Chr4g0069861 24.735 283 173 10 366 628 30 292 2.70e-17 85.9
Msa0622110 MtrunA17_Chr2g0302021 39.013 223 122 6 82 298 86 300 3.22e-40 155
Msa0622110 MtrunA17_Chr2g0302021 34.468 235 124 8 404 628 86 300 2.04e-25 111
Msa0622110 MtrunA17_Chr2g0302021 41.346 104 57 2 621 723 424 524 8.92e-20 93.6
Msa0622110 MtrunA17_Chr4g0069841 37.288 236 129 4 70 298 68 291 1.07e-39 154
Msa0622110 MtrunA17_Chr4g0069841 40.833 120 63 3 605 723 403 515 1.29e-20 96.3
Msa0622110 MtrunA17_Chr4g0069841 27.273 231 139 7 406 628 82 291 8.39e-20 93.6
Msa0622110 MtrunA17_Chr7g0269541 30.462 325 186 10 1 294 12 327 3.14e-36 144
Msa0622110 MtrunA17_Chr7g0269541 41.525 118 61 3 604 720 442 552 1.04e-22 102
Msa0622110 MtrunA17_Chr7g0269541 28.247 308 170 12 346 624 42 327 1.04e-19 93.6
Msa0622110 MtrunA17_Chr8g0345281 34.316 373 198 14 291 628 9 369 9.26e-36 143
Msa0622110 MtrunA17_Chr8g0345281 34.188 234 130 5 80 292 128 358 6.14e-33 134
Msa0622110 MtrunA17_Chr8g0345281 41.129 124 65 3 601 723 472 588 5.71e-21 97.8
Msa0622110 MtrunA17_Chr1g0194091 33.003 303 177 10 347 627 39 337 3.83e-35 141
Msa0622110 MtrunA17_Chr1g0194091 32.340 235 129 8 86 295 106 335 5.17e-28 119
Msa0622110 MtrunA17_Chr1g0194091 43.636 110 52 3 624 726 465 571 2.81e-23 104
Msa0622110 MtrunA17_Chr7g0233771 38.889 216 114 7 84 292 117 321 5.47e-35 140
Msa0622110 MtrunA17_Chr7g0233771 32.787 244 142 9 386 624 97 323 3.97e-26 113
Msa0622110 MtrunA17_Chr7g0233771 35.780 109 64 3 616 723 450 553 7.67e-13 71.6
Msa0622110 MtrunA17_Chr7g0233831 35.586 222 113 7 84 292 118 322 8.23e-35 140
Msa0622110 MtrunA17_Chr7g0233831 31.950 241 144 8 388 624 100 324 4.55e-24 107
Msa0622110 MtrunA17_Chr7g0233831 35.455 110 65 3 615 723 450 554 1.03e-14 77.8
Msa0622110 MtrunA17_Chr7g0270661 30.986 355 206 12 299 627 2 343 2.22e-34 139
Msa0622110 MtrunA17_Chr7g0270661 31.227 269 146 10 69 306 88 348 2.47e-25 111
Msa0622110 MtrunA17_Chr7g0270661 44.156 77 40 1 624 700 471 544 1.21e-16 84.0
Msa0622110 MtrunA17_Chr7g0270671 30.986 355 206 12 299 627 2 343 2.22e-34 139
Msa0622110 MtrunA17_Chr7g0270671 31.227 269 146 10 69 306 88 348 2.47e-25 111
Msa0622110 MtrunA17_Chr7g0270671 44.156 77 40 1 624 700 471 544 1.21e-16 84.0
Msa0622110 MtrunA17_Chr3g0126771 35.802 243 128 8 77 296 133 370 2.38e-33 136
Msa0622110 MtrunA17_Chr3g0126771 28.242 347 224 10 298 624 27 368 3.74e-28 120
Msa0622110 MtrunA17_Chr3g0126771 40.496 121 64 3 604 723 483 596 2.74e-20 95.5
Msa0622110 MtrunA17_Chr7g0270651 29.781 319 195 10 335 627 28 343 4.88e-33 134
Msa0622110 MtrunA17_Chr7g0270651 29.070 258 150 6 69 296 88 342 6.13e-25 110
Msa0622110 MtrunA17_Chr7g0270651 45.455 77 39 1 624 700 471 544 1.21e-16 84.0
Msa0622110 MtrunA17_Chr1g0147051 34.182 275 142 9 54 296 113 380 7.80e-33 134
Msa0622110 MtrunA17_Chr1g0147051 28.150 373 234 11 297 644 33 396 3.30e-31 129
Msa0622110 MtrunA17_Chr1g0147051 41.000 100 55 2 625 723 510 606 5.40e-18 88.2
Msa0622110 MtrunA17_Chr4g0011791 38.991 218 97 10 84 292 91 281 2.08e-32 132
Msa0622110 MtrunA17_Chr4g0011791 28.720 289 167 11 345 624 25 283 2.23e-20 95.5
Msa0622110 MtrunA17_Chr4g0011791 43.564 101 53 2 624 723 411 508 2.17e-19 92.4
Msa0622110 MtrunA17_Chr8g0391311 34.483 261 139 7 55 294 63 312 6.57e-32 130
Msa0622110 MtrunA17_Chr8g0391311 32.218 239 132 8 403 627 93 315 1.74e-21 99.0
Msa0622110 MtrunA17_Chr8g0391311 40.000 100 56 2 625 723 444 540 6.73e-16 81.6
Msa0622110 MtrunA17_Chr8g0391291 34.231 260 139 7 55 293 61 309 1.67e-31 129
Msa0622110 MtrunA17_Chr8g0391291 32.218 239 132 9 403 627 91 313 7.88e-22 100
Msa0622110 MtrunA17_Chr8g0391291 40.000 100 56 2 625 723 442 538 8.04e-16 81.3
Msa0622110 MtrunA17_Chr4g0069881 35.273 275 146 12 88 359 105 350 2.81e-31 129
Msa0622110 MtrunA17_Chr4g0069881 26.498 317 202 8 325 628 16 314 1.27e-22 102
Msa0622110 MtrunA17_Chr4g0069881 42.000 100 57 1 624 723 436 534 2.20e-19 92.4
Msa0622110 MtrunA17_Chr8g0391281 35.223 247 128 7 69 294 75 310 4.23e-31 124
Msa0622110 MtrunA17_Chr8g0391281 30.651 261 150 10 379 624 66 310 6.83e-21 94.4
Msa0622110 MtrunA17_Chr7g0233801 36.239 218 121 8 84 294 117 323 8.49e-31 127
Msa0622110 MtrunA17_Chr7g0233801 32.794 247 134 9 388 624 99 323 2.39e-27 117
Msa0622110 MtrunA17_Chr7g0233801 36.697 109 64 2 615 723 449 552 5.50e-16 81.6
Msa0622110 MtrunA17_Chr7g0270631 29.412 340 201 13 314 627 5 331 2.31e-30 128
Msa0622110 MtrunA17_Chr7g0270631 29.240 342 203 12 312 627 551 879 4.28e-28 121
Msa0622110 MtrunA17_Chr7g0270631 30.268 261 145 7 68 296 75 330 2.71e-25 112
Msa0622110 MtrunA17_Chr7g0270631 31.538 260 141 8 69 296 624 878 3.96e-25 112
Msa0622110 MtrunA17_Chr7g0270631 45.455 77 39 1 624 700 459 532 2.45e-16 83.6
Msa0622110 MtrunA17_Chr7g0270631 40.000 80 45 1 624 700 1009 1088 1.77e-13 74.3
Msa0622110 MtrunA17_Chr4g0011771 37.615 218 105 8 82 292 90 283 3.45e-30 125
Msa0622110 MtrunA17_Chr4g0011771 30.034 293 165 11 343 624 22 285 9.19e-20 93.6
Msa0622110 MtrunA17_Chr4g0011771 43.878 98 51 2 625 721 416 510 4.22e-19 91.3
Msa0622110 MtrunA17_Chr8g0345211 30.137 292 177 10 348 624 76 355 1.45e-29 124
Msa0622110 MtrunA17_Chr8g0345211 33.808 281 150 10 44 294 81 355 1.06e-24 109
Msa0622110 MtrunA17_Chr8g0345211 41.237 97 54 2 625 720 484 578 2.39e-16 83.2
Msa0622110 MtrunA17_Chr7g0234731 34.419 215 113 7 91 295 121 317 1.99e-28 116
Msa0622110 MtrunA17_Chr1g0192331 33.193 238 136 6 71 294 69 297 1.12e-26 115
Msa0622110 MtrunA17_Chr1g0192331 43.434 99 53 1 625 723 432 527 4.93e-20 94.4
Msa0622110 MtrunA17_Chr1g0192331 30.222 225 130 8 410 624 90 297 2.89e-13 73.2
Msa0622110 MtrunA17_Chr3g0079341 38.636 176 88 5 127 294 134 297 1.73e-26 114
Msa0622110 MtrunA17_Chr3g0079341 39.216 102 55 3 625 723 429 526 2.48e-16 82.8
Msa0622110 MtrunA17_Chr3g0079351 37.778 180 88 6 125 294 132 297 3.50e-26 113
Msa0622110 MtrunA17_Chr3g0079351 41.176 102 53 3 625 723 429 526 3.56e-17 85.5
Msa0622110 MtrunA17_Chr7g0270691 31.429 245 144 8 68 293 81 320 1.01e-25 112
Msa0622110 MtrunA17_Chr7g0270691 27.114 343 208 13 307 630 8 327 2.47e-25 111
Msa0622110 MtrunA17_Chr7g0270691 39.604 101 56 3 624 723 452 548 1.90e-18 89.7
Msa0622110 MtrunA17_Chr3g0090091 39.106 179 85 7 127 294 133 298 1.12e-25 112
Msa0622110 MtrunA17_Chr3g0090091 39.216 102 55 3 625 723 430 527 8.05e-16 81.3
Msa0622110 MtrunA17_Chr3g0079361 38.068 176 89 5 127 294 134 297 1.19e-25 111
Msa0622110 MtrunA17_Chr3g0079361 39.216 102 55 3 625 723 429 526 2.57e-16 82.8
Msa0622110 MtrunA17_Chr4g0018371 33.036 224 128 6 81 294 98 309 1.68e-24 108
Msa0622110 MtrunA17_Chr4g0018371 33.333 126 69 4 603 723 423 538 2.76e-15 79.3
Msa0622110 MtrunA17_Chr4g0018371 25.899 278 175 12 358 624 52 309 9.74e-13 71.2
Msa0622110 MtrunA17_Chr4g0011751 34.821 224 119 10 78 293 55 259 2.57e-23 104
Msa0622110 MtrunA17_Chr4g0011751 36.792 106 63 2 619 723 386 488 3.09e-16 82.4
Msa0622110 MtrunA17_Chr4g0011751 28.571 210 107 6 430 622 75 258 8.41e-11 65.1
Msa0622110 MtrunA17_Chr1g0195311 45.872 109 52 2 615 723 212 313 2.87e-23 101
Msa0622110 MtrunA17_Chr8g0354911 43.689 103 55 1 621 723 512 611 5.24e-23 104
Msa0622110 MtrunA17_Chr8g0354911 30.040 253 140 9 80 296 135 386 1.20e-20 96.7
Msa0622110 MtrunA17_Chr8g0354911 27.848 316 175 11 353 624 78 384 4.37e-19 91.7
Msa0622110 MtrunA17_Chr1g0195301 45.872 109 52 2 615 723 453 554 6.96e-23 103
Msa0622110 MtrunA17_Chr1g0195301 27.957 279 151 8 88 335 91 350 4.96e-19 91.3
Msa0622110 MtrunA17_Chr1g0195301 25.161 310 194 10 350 628 29 331 5.58e-14 75.5
Msa0622110 MtrunA17_Chr1g0195321 45.872 109 52 2 615 723 453 554 6.96e-23 103
Msa0622110 MtrunA17_Chr1g0195321 27.957 279 151 8 88 335 91 350 4.96e-19 91.3
Msa0622110 MtrunA17_Chr1g0195321 25.161 310 194 10 350 628 29 331 5.58e-14 75.5
Msa0622110 MtrunA17_Chr1g0175661 30.932 236 133 6 88 294 96 330 1.49e-22 102
Msa0622110 MtrunA17_Chr1g0175661 44.037 109 54 2 615 723 456 557 2.86e-21 98.6
Msa0622110 MtrunA17_Chr1g0175661 28.247 308 185 9 350 628 34 334 5.18e-18 88.2
Msa0622110 MtrunA17_Chr1g0195331 45.872 109 52 2 615 723 453 554 1.72e-22 102
Msa0622110 MtrunA17_Chr1g0195331 28.315 279 150 8 88 335 91 350 1.16e-19 93.6
Msa0622110 MtrunA17_Chr1g0195331 25.484 310 193 10 350 628 29 331 1.34e-14 77.4
Msa0622110 MtrunA17_Chr3g0080381 40.777 103 58 1 621 723 528 627 4.64e-22 101
Msa0622110 MtrunA17_Chr3g0080381 27.027 259 148 6 77 296 146 402 3.04e-16 82.8
Msa0622110 MtrunA17_Chr7g0269511 31.646 237 131 7 88 294 101 336 3.46e-21 98.2
Msa0622110 MtrunA17_Chr7g0269511 40.367 109 62 1 613 721 456 561 3.80e-20 95.1
Msa0622110 MtrunA17_Chr7g0269511 28.000 275 170 10 387 637 79 349 2.10e-16 83.2
Msa0622110 MtrunA17_Chr2g0299431 42.857 105 57 2 193 294 30 134 2.13e-20 92.4
Msa0622110 MtrunA17_Chr2g0302001 41.000 100 56 1 624 723 340 436 3.14e-20 94.4
Msa0622110 MtrunA17_Chr8g0380581 43.434 99 51 3 625 722 280 374 4.42e-20 93.2
Msa0622110 MtrunA17_Chr8g0380581 42.308 104 55 4 194 293 45 147 3.37e-16 81.3
Msa0622110 MtrunA17_Chr8g0380581 38.971 136 65 7 504 633 31 154 1.35e-12 70.1
Msa0622110 MtrunA17_Chr7g0269521 42.202 109 56 2 615 723 460 561 6.07e-20 94.4
Msa0622110 MtrunA17_Chr7g0269521 29.064 203 106 7 126 294 136 334 3.27e-15 79.3
Msa0622110 MtrunA17_Chr7g0269521 27.675 271 149 10 392 628 81 338 3.82e-15 79.3
Msa0622110 MtrunA17_Chr3g0129921 35.897 117 68 3 605 721 450 559 6.95e-20 94.0
Msa0622110 MtrunA17_Chr3g0129921 23.881 335 189 9 1 294 21 330 3.40e-13 72.8
Msa0622110 MtrunA17_Chr1g0195351 44.860 107 50 3 615 721 453 550 7.03e-20 94.0
Msa0622110 MtrunA17_Chr1g0195351 27.957 279 151 8 88 335 91 350 5.01e-19 91.3
Msa0622110 MtrunA17_Chr1g0195351 25.161 310 194 10 350 628 29 331 5.55e-14 75.5
Msa0622110 MtrunA17_Chr5g0437831 37.838 111 62 2 195 299 50 159 9.08e-19 89.4
Msa0622110 MtrunA17_Chr5g0437831 35.514 107 64 3 618 723 280 382 5.46e-16 80.9
Msa0622110 MtrunA17_Chr5g0437831 33.871 124 73 3 508 627 39 157 6.33e-14 74.3
Msa0622110 MtrunA17_Chr2g0301941 28.505 214 133 5 300 497 22 231 8.13e-18 85.9
Msa0622110 MtrunA17_Chr7g0269531 39.623 106 57 2 615 720 463 561 9.43e-18 87.4
Msa0622110 MtrunA17_Chr7g0269531 28.452 239 118 8 130 335 142 360 1.29e-15 80.5
Msa0622110 MtrunA17_Chr7g0269531 25.159 314 186 10 350 627 40 340 7.44e-14 75.1
Msa0622110 MtrunA17_Chr8g0384121 39.362 94 52 2 625 718 470 558 2.98e-17 85.9
Msa0622110 MtrunA17_Chr8g0384121 42.222 90 46 3 221 304 254 343 1.59e-12 70.9
Msa0622110 MtrunA17_Chr7g0271381 28.000 350 185 16 295 622 16 320 1.18e-16 84.0
Msa0622110 MtrunA17_Chr7g0271381 31.401 207 128 5 91 293 125 321 1.41e-14 77.4
Msa0622110 MtrunA17_Chr7g0271381 33.663 101 61 2 626 723 458 555 3.31e-13 72.8
Msa0622110 MtrunA17_Chr8g0391261 40.000 100 56 2 625 723 69 165 1.29e-16 78.2
Msa0622110 MtrunA17_Chr7g0234711 40.196 102 54 3 625 723 171 268 2.39e-16 80.1
Msa0622110 MtrunA17_Chr2g0301931 40.000 115 65 2 609 723 181 291 2.84e-16 80.1
Msa0622110 MtrunA17_Chr4g0018241 38.235 102 48 3 81 171 96 193 8.23e-13 67.8
Msa0622110 MtrunA17_Chr4g0018251 38.614 101 47 3 81 170 96 192 8.97e-13 67.8
Msa0622110 MtrunA17_Chr5g0446301 35.165 91 54 2 625 715 274 359 1.57e-12 69.7
Msa0622110 MtrunA17_Chr2g0334111 34.906 106 64 3 619 723 221 322 1.65e-11 66.2
Msa0622110 MtrunA17_Chr4g0018281 36.441 118 56 4 68 170 79 192 2.01e-11 63.9
Msa0622110 MtrunA17_Chr8g0389771 34.831 89 53 2 625 713 294 377 2.77e-11 66.2
Msa0622110 MtrunA17_Chr6g0487101 35.955 89 52 2 625 713 297 380 2.99e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622110 AT3G05610.1 45.507 345 164 9 295 627 8 340 1.07e-89 295
Msa0622110 AT3G05610.1 32.453 265 132 10 82 327 116 352 2.58e-31 130
Msa0622110 AT3G05610.1 42.857 119 58 2 619 730 463 578 6.71e-25 110
Msa0622110 AT5G27870.1 43.023 344 170 8 295 627 9 337 7.85e-85 284
Msa0622110 AT5G27870.1 31.716 268 150 8 84 328 117 374 8.61e-32 132
Msa0622110 AT5G27870.1 38.793 116 64 2 605 720 450 558 3.04e-22 102
Msa0622110 AT3G05620.1 46.201 329 129 8 9 298 7 326 1.47e-83 275
Msa0622110 AT3G05620.1 25.507 345 217 10 305 628 1 326 2.82e-24 108
Msa0622110 AT3G05620.1 40.404 99 56 1 625 723 445 540 1.39e-17 87.4
Msa0622110 AT5G49180.1 40.230 348 174 11 298 624 8 342 7.05e-65 226
Msa0622110 AT5G49180.1 46.667 120 57 2 601 720 454 566 6.86e-27 116
Msa0622110 AT5G49180.1 29.368 269 167 9 88 334 121 388 2.60e-20 95.9
Msa0622110 AT3G06830.1 35.143 350 192 11 295 623 4 339 1.87e-52 191
Msa0622110 AT3G06830.1 46.610 118 56 2 604 721 455 565 1.06e-25 112
Msa0622110 AT3G06830.1 27.888 251 145 9 82 304 111 353 3.53e-19 92.4
Msa0622110 AT4G33220.1 40.891 247 124 5 73 298 53 298 1.35e-50 185
Msa0622110 AT4G33220.1 30.798 263 157 7 383 628 44 298 2.82e-23 104
Msa0622110 AT4G33220.1 37.383 107 63 2 618 723 419 522 3.49e-16 82.8
Msa0622110 AT3G43270.1 38.589 241 136 5 69 298 61 300 2.16e-44 167
Msa0622110 AT3G43270.1 32.759 232 142 5 405 628 75 300 6.87e-24 106
Msa0622110 AT3G43270.1 39.806 103 58 2 622 723 425 524 2.31e-17 86.7
Msa0622110 AT3G10710.1 35.860 343 187 15 297 628 21 341 3.60e-40 156
Msa0622110 AT3G10710.1 35.341 249 136 9 60 294 100 337 2.50e-28 120
Msa0622110 AT3G10710.1 38.462 104 61 1 620 723 460 560 1.38e-20 96.7
Msa0622110 AT1G11580.1 37.900 219 116 5 84 292 118 326 5.91e-37 146
Msa0622110 AT1G11580.1 30.702 228 132 6 406 624 118 328 3.55e-21 98.6
Msa0622110 AT1G11580.1 36.364 121 69 3 601 720 440 553 7.55e-18 88.2
Msa0622110 AT1G11580.2 37.900 219 116 5 84 292 139 347 9.50e-37 146
Msa0622110 AT1G11580.2 30.702 228 132 6 406 624 139 349 3.91e-21 98.6
Msa0622110 AT1G11580.2 36.364 121 69 3 601 720 461 574 8.33e-18 88.2
Msa0622110 AT5G04960.1 35.530 349 183 12 297 628 20 343 1.49e-36 145
Msa0622110 AT5G04960.1 44.898 98 50 2 625 721 467 561 1.79e-22 102
Msa0622110 AT5G04960.1 32.314 229 127 6 81 294 124 339 4.20e-22 101
Msa0622110 AT5G53370.1 33.333 333 191 11 304 624 43 356 2.09e-36 145
Msa0622110 AT5G53370.1 31.802 283 159 9 37 293 81 355 2.16e-33 136
Msa0622110 AT5G53370.1 40.777 103 57 2 625 726 488 587 1.33e-17 87.4
Msa0622110 AT5G53370.2 33.433 335 188 12 304 624 79 392 2.74e-36 145
Msa0622110 AT5G53370.2 31.802 283 159 9 37 293 117 391 2.44e-33 136
Msa0622110 AT5G53370.2 40.777 103 57 2 625 726 524 623 1.39e-17 87.4
Msa0622110 AT4G33220.2 41.765 170 84 3 143 298 9 177 1.01e-34 137
Msa0622110 AT4G33220.2 43.077 130 65 4 503 628 53 177 4.03e-18 87.8
Msa0622110 AT4G33220.2 38.835 103 59 2 622 723 302 401 4.30e-16 81.6
Msa0622110 AT2G26450.1 33.229 319 176 12 326 622 78 381 1.47e-34 140
Msa0622110 AT2G26450.1 35.135 222 127 6 82 293 168 382 9.36e-27 116
Msa0622110 AT2G26450.1 44.554 101 51 3 624 723 514 610 2.97e-18 89.7
Msa0622110 AT3G14300.1 33.667 300 159 10 349 624 459 742 1.38e-33 139
Msa0622110 AT3G14300.1 29.487 234 148 5 88 307 525 755 2.11e-23 106
Msa0622110 AT3G14300.1 27.049 244 157 6 297 523 25 264 6.35e-21 99.0
Msa0622110 AT3G14300.1 45.833 96 48 4 620 713 865 958 5.18e-17 86.3
Msa0622110 AT1G53840.1 30.114 352 205 12 348 676 72 405 1.90e-33 136
Msa0622110 AT1G53840.1 34.314 204 109 6 125 307 176 375 1.05e-22 103
Msa0622110 AT1G53840.1 47.368 95 47 2 625 718 489 581 7.59e-21 97.8
Msa0622110 AT4G02300.1 31.447 318 159 11 4 294 18 303 3.19e-32 132
Msa0622110 AT4G02300.1 30.502 259 161 7 375 624 55 303 7.02e-22 100
Msa0622110 AT4G02300.1 37.624 101 59 2 624 723 434 531 2.20e-16 83.6
Msa0622110 AT4G33230.1 30.743 296 185 7 341 622 87 376 6.83e-32 132
Msa0622110 AT4G33230.1 30.068 296 170 7 31 293 86 377 6.08e-28 120
Msa0622110 AT4G33230.1 40.594 101 55 3 624 723 509 605 1.92e-14 77.4
Msa0622110 AT3G49220.2 31.837 245 139 6 69 295 179 413 2.19e-31 127
Msa0622110 AT3G49220.2 26.765 340 226 10 295 622 82 410 1.97e-29 122
Msa0622110 AT2G45220.1 38.785 214 107 8 82 292 90 282 3.14e-31 129
Msa0622110 AT2G45220.1 31.902 326 159 16 310 624 11 284 1.11e-21 99.8
Msa0622110 AT2G45220.1 36.066 122 69 4 603 723 397 510 9.46e-16 81.3
Msa0622110 AT1G53830.1 34.675 323 163 14 343 628 56 367 1.43e-30 127
Msa0622110 AT1G53830.1 33.190 232 132 4 84 292 125 356 1.89e-29 124
Msa0622110 AT1G53830.1 42.017 119 61 3 604 721 473 584 8.91e-20 94.4
Msa0622110 AT4G02320.1 31.119 286 143 8 33 294 34 289 1.65e-30 127
Msa0622110 AT4G02320.1 38.333 120 66 3 603 721 403 515 1.03e-19 94.0
Msa0622110 AT4G02320.1 28.302 265 161 8 375 624 39 289 4.55e-17 85.5
Msa0622110 AT4G15980.2 34.419 215 132 6 296 505 9 219 3.12e-30 127
Msa0622110 AT4G15980.2 50.833 120 52 4 511 624 366 484 3.04e-21 99.4
Msa0622110 AT4G15980.2 42.017 119 62 2 603 721 598 709 9.23e-19 91.7
Msa0622110 AT4G15980.2 33.544 158 92 4 182 326 365 522 3.48e-17 86.7
Msa0622110 AT2G26440.1 38.739 222 113 8 88 293 104 318 6.92e-30 125
Msa0622110 AT2G26440.1 42.000 100 55 1 624 723 450 546 4.41e-20 95.1
Msa0622110 AT2G26440.1 29.278 263 152 6 388 628 78 328 4.95e-19 91.7
Msa0622110 AT4G15980.1 33.333 210 132 5 301 505 3 209 7.05e-30 126
Msa0622110 AT4G15980.1 50.833 120 52 4 511 624 356 474 2.55e-21 99.8
Msa0622110 AT4G15980.1 42.017 119 62 2 603 721 588 699 7.25e-19 91.7
Msa0622110 AT4G15980.1 33.544 158 92 4 182 326 355 512 2.89e-17 86.7
Msa0622110 AT3G49220.1 26.901 342 227 10 295 624 37 367 1.68e-29 124
Msa0622110 AT3G49220.1 31.557 244 139 6 69 294 134 367 4.25e-29 123
Msa0622110 AT3G49220.1 41.346 104 57 2 621 723 495 595 3.06e-18 89.7
Msa0622110 AT3G49220.3 26.901 342 227 10 295 624 82 412 2.58e-29 124
Msa0622110 AT3G49220.3 31.557 244 139 6 69 294 179 412 6.40e-29 123
Msa0622110 AT3G49220.3 41.346 104 57 2 621 723 540 640 4.04e-18 89.4
Msa0622110 AT3G14310.1 32.749 342 175 16 332 628 41 372 4.14e-28 120
Msa0622110 AT3G14310.1 30.453 243 132 4 84 292 122 361 1.27e-27 119
Msa0622110 AT3G14310.1 36.290 124 71 3 601 723 475 591 1.44e-17 87.4
Msa0622110 AT1G23200.1 34.661 251 121 8 80 296 95 336 1.80e-27 118
Msa0622110 AT1G23200.1 40.517 116 61 3 611 723 443 553 6.91e-19 91.3
Msa0622110 AT1G23200.1 30.182 275 138 12 383 624 81 334 1.07e-15 81.3
Msa0622110 AT5G51490.1 31.915 235 143 5 68 294 80 305 3.45e-27 117
Msa0622110 AT5G51490.1 39.091 110 61 3 615 723 431 535 4.78e-19 91.7
Msa0622110 AT5G51490.1 24.739 287 182 11 353 624 38 305 2.94e-11 67.0
Msa0622110 AT5G51500.1 32.489 237 139 7 68 294 84 309 1.09e-26 115
Msa0622110 AT5G51500.1 37.755 98 59 2 625 721 441 537 5.01e-17 85.5
Msa0622110 AT3G47400.1 34.956 226 124 6 82 294 148 363 4.02e-26 114
Msa0622110 AT3G47400.1 36.641 131 78 3 597 723 464 593 1.16e-16 84.3
Msa0622110 AT3G47400.1 25.000 260 170 8 374 625 122 364 6.09e-12 69.3
Msa0622110 AT2G43050.1 35.321 218 106 7 89 292 98 294 1.49e-25 112
Msa0622110 AT2G43050.1 40.777 103 57 2 622 723 416 515 1.52e-19 93.2
Msa0622110 AT3G59010.1 32.719 217 122 6 89 292 102 307 2.08e-24 108
Msa0622110 AT3G59010.1 37.500 104 61 2 621 723 427 527 1.04e-15 81.3
Msa0622110 AT3G59010.1 26.923 234 148 8 405 627 91 312 4.83e-13 72.8
Msa0622110 AT3G10720.1 39.806 103 59 1 621 723 159 258 5.84e-22 96.7
Msa0622110 AT4G02330.1 29.210 291 143 9 88 335 96 366 1.08e-21 100
Msa0622110 AT4G02330.1 43.434 99 53 1 625 723 475 570 3.53e-19 92.4
Msa0622110 AT4G02330.1 27.778 252 141 11 410 624 96 343 2.59e-12 70.5
Msa0622110 AT3G27980.1 43.396 106 55 3 620 723 394 496 1.92e-21 99.0
Msa0622110 AT3G27980.1 33.529 170 98 5 129 292 108 268 9.11e-18 87.4
Msa0622110 AT4G00190.1 33.649 211 108 6 88 293 64 247 2.07e-21 98.6
Msa0622110 AT4G00190.1 37.755 98 57 2 625 721 377 471 1.57e-16 83.6
Msa0622110 AT4G00190.1 26.165 279 159 9 352 622 7 246 5.03e-12 69.3
Msa0622110 AT4G03930.1 43.396 106 55 3 620 723 421 523 2.65e-21 99.0
Msa0622110 AT4G03930.1 33.166 199 107 7 120 307 123 306 3.95e-21 98.2
Msa0622110 AT4G03930.1 27.715 267 157 9 374 624 51 297 2.09e-11 67.4
Msa0622110 AT3G10720.2 39.806 103 59 1 621 723 515 614 4.04e-21 98.6
Msa0622110 AT3G10720.2 28.395 243 134 8 88 294 149 387 8.74e-16 81.6
Msa0622110 AT3G10720.2 27.966 236 123 9 431 624 157 387 7.26e-11 65.9
Msa0622110 AT1G11590.1 40.952 105 58 2 620 723 422 523 6.16e-21 97.8
Msa0622110 AT1G11590.1 35.326 184 97 6 120 292 123 295 5.28e-20 94.7
Msa0622110 AT2G47040.1 27.348 362 192 13 304 610 6 351 7.97e-21 97.8
Msa0622110 AT2G47040.1 38.000 100 58 2 624 723 499 594 1.17e-14 78.2
Msa0622110 AT2G47040.1 35.714 98 52 1 194 280 254 351 1.69e-13 74.3
Msa0622110 AT5G04970.1 39.252 107 62 1 621 727 520 623 1.90e-20 96.7
Msa0622110 AT5G04970.1 28.226 248 132 9 85 293 151 391 1.28e-16 84.3
Msa0622110 AT1G02810.1 45.455 99 51 1 625 723 481 576 2.28e-20 96.3
Msa0622110 AT1G02810.1 25.753 299 153 6 88 335 92 372 1.11e-16 84.3
Msa0622110 AT1G02810.1 23.894 339 196 11 343 627 22 352 5.18e-11 66.6
Msa0622110 AT2G47550.1 41.441 111 62 1 613 723 450 557 4.11e-20 95.1
Msa0622110 AT2G47550.1 34.568 243 110 11 88 293 99 329 2.71e-19 92.8
Msa0622110 AT2G47550.1 32.157 255 133 11 400 622 82 328 1.20e-16 84.3
Msa0622110 AT3G60730.1 30.638 235 131 6 86 296 66 292 6.54e-20 94.4
Msa0622110 AT3G60730.1 41.129 124 65 3 601 723 402 518 1.91e-19 92.8
Msa0622110 AT2G47030.1 26.546 388 213 16 304 636 6 376 1.39e-19 93.6
Msa0622110 AT2G47030.1 41.748 103 55 3 622 723 489 587 1.55e-15 80.9
Msa0622110 AT2G47030.1 22.006 359 206 10 3 292 5 358 2.95e-15 80.1
Msa0622110 AT3G62170.1 28.986 345 192 14 304 606 7 340 1.77e-19 93.6
Msa0622110 AT3G62170.1 23.529 306 166 10 37 280 45 344 1.35e-15 81.3
Msa0622110 AT3G62170.1 39.000 100 57 2 624 723 492 587 3.05e-14 76.6
Msa0622110 AT5G20860.2 30.556 216 119 7 90 293 110 306 8.50e-18 87.8
Msa0622110 AT5G20860.2 28.740 254 144 14 382 623 78 306 5.40e-14 75.9
Msa0622110 AT5G20860.2 35.000 100 64 1 624 723 439 537 1.17e-13 74.7
Msa0622110 AT1G11370.1 47.126 87 42 1 542 624 41 127 1.73e-17 84.0
Msa0622110 AT1G11370.1 44.000 100 55 1 195 294 29 127 3.14e-17 83.2
Msa0622110 AT5G09760.2 40.217 92 50 2 625 716 490 576 5.57e-15 79.0
Msa0622110 AT5G09760.2 26.710 307 160 12 33 294 64 350 4.12e-14 76.3
Msa0622110 AT5G09760.2 27.302 315 187 13 336 627 58 353 3.87e-13 73.2
Msa0622110 AT5G09760.1 40.217 92 50 2 625 716 464 550 5.82e-15 79.0
Msa0622110 AT5G09760.1 26.710 307 160 12 33 294 38 324 4.32e-14 76.3
Msa0622110 AT5G09760.1 27.302 315 187 13 336 627 32 327 2.83e-13 73.6
Msa0622110 AT5G64640.1 39.130 92 51 2 625 716 515 601 4.96e-14 76.3
Msa0622110 AT5G64640.1 26.230 305 154 14 21 294 110 374 8.14e-13 72.4
Msa0622110 AT1G44980.1 37.383 107 59 2 195 294 54 159 1.34e-13 71.6
Msa0622110 AT2G21610.1 36.667 90 52 2 625 714 249 333 1.55e-13 73.2
Msa0622110 AT2G21610.2 36.667 90 52 2 625 714 254 338 1.72e-13 73.2
Msa0622110 AT2G36710.1 34.579 107 59 3 612 718 295 390 1.03e-11 68.2
Msa0622110 AT5G19730.1 34.409 93 56 2 623 715 296 383 2.89e-11 66.6
Msa0622110 AT3G62820.1 27.329 161 100 6 349 496 34 190 3.49e-11 63.5

Find 148 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCATCTCTTCGAATGTTT+TGG 0.261353 4_2:+74480017 None:intergenic
TTTGGAAAGTTGGTTAATAA+TGG 0.264039 4_2:+74480035 None:intergenic
AGCTTAATCGCTTACCCTTT+AGG 0.279269 4_2:-74483167 Msa0622110:CDS
TCCTCACGAGTTTGAAAGTA+TGG 0.280851 4_2:-74480182 Msa0622110:CDS
ATGTTAAACAGCGTGTAAAA+TGG 0.287244 4_2:-74478667 Msa0622110:CDS
AAGCTTGCATATCTTGAGTT+TGG 0.290313 4_2:+74483652 None:intergenic
AAGCATCCAAACATGTTTCT+TGG 0.291839 4_2:+74480139 None:intergenic
CGTAGGCTTTAACAACAAAA+AGG 0.307002 4_2:-74480553 Msa0622110:CDS
CTTGATCAAATGATGGTAAA+AGG 0.313433 4_2:+74483709 None:intergenic
GGCGAGTCTCTTATTCCTCT+TGG 0.325806 4_2:+74480632 None:intergenic
GCGATCTTGATGAGTTCTTT+TGG 0.333772 4_2:+74480393 None:intergenic
TTAGTCGCTCCTGGAGAATA+AGG 0.334117 4_2:+74478551 None:intergenic
AATAAGAGACTCGCCATAAT+TGG 0.336144 4_2:-74480624 Msa0622110:CDS
CGCACCAACAGATTACAAAA+AGG 0.337284 4_2:-74480460 Msa0622110:CDS
TGGACTTGGAGGGCCTGTTC+TGG 0.341206 4_2:+74483560 None:intergenic
TCTCCATGGAAGAACCTAAT+TGG 0.344137 4_2:+74478599 None:intergenic
ACTCAAGAACAAAGCTTACT+TGG 0.364967 4_2:-74478849 Msa0622110:intron
TCAGAGCTTGCATGGTCGTT+AGG 0.365066 4_2:-74483390 Msa0622110:CDS
TGTTTGTGAGGCATGAGTTT+TGG 0.365441 4_2:+74483598 None:intergenic
TCCATGGAGATGATTGGATT+AGG 0.367957 4_2:-74478586 Msa0622110:CDS
GATCTTTGTCATGTTGTTGA+TGG 0.368569 4_2:+74483485 None:intergenic
GGACTCTGTCGAGGCTATTA+AGG 0.370735 4_2:+74480202 None:intergenic
TCAGCCTCTGTCATCCATTC+AGG 0.371531 4_2:+74483090 None:intergenic
GAGCTCCTTGCAATCTTCTA+TGG 0.371794 4_2:+74483428 None:intergenic
TGAACCTTTCTAGTGACCTT+TGG 0.372141 4_2:+74480235 None:intergenic
TGCCATGGCATATAACCTTC+AGG 0.375684 4_2:+74478761 None:intergenic
TACCTTCTTATTAGTTGCTA+TGG 0.379202 4_2:-74480595 Msa0622110:CDS
CCATGGAGATGATTGGATTA+GGG 0.381519 4_2:-74478585 Msa0622110:CDS
AACTAGTACTGATGAAAGTT+TGG 0.382732 4_2:-74483118 Msa0622110:CDS
ATGTCTGAGGGAATTTCATC+TGG 0.384523 4_2:+74483675 None:intergenic
GGTAGAAAGACACGCATTAC+TGG 0.385408 4_2:-74479667 Msa0622110:CDS
GAAGGTAGAGACACCAATTA+TGG 0.391812 4_2:+74480611 None:intergenic
GGTTCTTCCATGGAGATGAT+TGG 0.392530 4_2:-74478592 Msa0622110:CDS
CAGAGCTTGCATGGTCGTTA+GGG 0.395199 4_2:-74483389 Msa0622110:CDS
ACAATTTAATTTCAATGAGT+TGG 0.409721 4_2:+74478512 None:intergenic
TTTCAATGAGTTGGTCTTGA+AGG 0.414935 4_2:+74478521 None:intergenic
GATGCAGTTGTTGCGTTGGA+TGG 0.417977 4_2:-74483027 Msa0622110:CDS
AATGACTGGCAGGAAACTTC+AGG 0.422351 4_2:-74479866 Msa0622110:CDS
CCGCACTTAGCCATGCTTCG+AGG 0.428133 4_2:+74483316 None:intergenic
TTTGAAGTTTGATCTTCTCC+AGG 0.434407 4_2:+74480528 None:intergenic
CAGCTCCTAGTCATAGCAAT+AGG 0.443935 4_2:-74482966 Msa0622110:CDS
CACATACCAAGAAACATGTT+TGG 0.444323 4_2:-74480145 Msa0622110:CDS
GCCATTTGTTATTTACATCA+AGG 0.444761 4_2:-74479758 Msa0622110:CDS
ACAGAACATTACTGATAAGC+TGG 0.453691 4_2:+74483202 None:intergenic
GGCTCATGTTGTTGTTGCTA+AGG 0.457290 4_2:-74479845 Msa0622110:CDS
TAACAGCTTCGTTGATTGTA+CGG 0.460625 4_2:+74482992 None:intergenic
TGACCTTTGGAATTCGTCAA+TGG 0.461831 4_2:+74480248 None:intergenic
CGTCTTGAGAGTTACATTAG+TGG 0.463916 4_2:-74483243 Msa0622110:CDS
TCATGCAAGGTAGTGTTCCT+TGG 0.464611 4_2:+74483141 None:intergenic
ACTAGAGTTCCTTATTCTCC+AGG 0.465518 4_2:-74478560 Msa0622110:CDS
TTGATGACCGTGCTGGTGTT+AGG 0.465795 4_2:-74479903 Msa0622110:CDS
CATAACGAGCTAACCAGAAC+AGG 0.467307 4_2:-74483573 Msa0622110:CDS
GAGTACAATAACCGTGGTCC+TGG 0.487955 4_2:-74478695 Msa0622110:CDS
TCCTTGATGTAAATAACAAA+TGG 0.488674 4_2:+74479757 None:intergenic
AATCAAGACACATGTATTGA+AGG 0.492230 4_2:-74483285 Msa0622110:CDS
GAGAATACTACAACCGATGC+TGG 0.495607 4_2:-74480114 Msa0622110:CDS
AGAACTCTACTTACCAAAAG+TGG 0.497125 4_2:+74482789 None:intergenic
ACATGTTATCTATGTGAAGA+AGG 0.503880 4_2:-74482941 Msa0622110:CDS
GTAAAAGGATGAGAATGAAA+AGG 0.505964 4_2:+74483724 None:intergenic
TTCTTAATAAAATGACTGGC+AGG 0.507419 4_2:-74479876 Msa0622110:CDS
AAAGTTTGGAGTTTCCTGAA+TGG 0.509972 4_2:-74483104 Msa0622110:CDS
CATGTTGTTGTTGCTAAGGA+TGG 0.512218 4_2:-74479841 Msa0622110:CDS
TCAGTTCCTGTGATACCTGC+TGG 0.512310 4_2:+74478734 None:intergenic
AGTGTTCCTTGGAGACCTAA+AGG 0.513393 4_2:+74483152 None:intergenic
AACCATAGCAACTAATAAGA+AGG 0.515074 4_2:+74480593 None:intergenic
AAACTTCTTAATAAAATGAC+TGG 0.516106 4_2:-74479880 Msa0622110:CDS
AATTCCAAAGGTCACTAGAA+AGG 0.517206 4_2:-74480239 Msa0622110:intron
AAGCTTACTTGGCTCGTCCA+TGG 0.517908 4_2:-74478838 Msa0622110:CDS
AGAGTCACGCGTATCTCAAT+CGG 0.519171 4_2:-74480505 Msa0622110:CDS
ATGATCGTTGGTGATGGTAT+TGG 0.525137 4_2:-74482871 Msa0622110:CDS
CCCTAATCCAATCATCTCCA+TGG 0.525263 4_2:+74478585 None:intergenic
TTCAAAAGACGACGACCAGC+AGG 0.525389 4_2:+74479991 None:intergenic
GTGTTCCTTGGAGACCTAAA+GGG 0.526257 4_2:+74483153 None:intergenic
TGACAGAAGTTGGACTTGGA+GGG 0.528123 4_2:+74483550 None:intergenic
GTTAAGACTATTACTTCAGA+AGG 0.532193 4_2:-74478638 Msa0622110:CDS
CGCTGTTTAACATCGGAACC+AGG 0.533128 4_2:+74478677 None:intergenic
CAATGAGTTGGTCTTGAAGG+AGG 0.534391 4_2:+74478524 None:intergenic
ATGCCATGGCAAACACCAGC+AGG 0.535502 4_2:-74478749 Msa0622110:CDS
GAGAGAACTTGATCAAATGA+TGG 0.538479 4_2:+74483702 None:intergenic
GTGCCAATTAGGTTCTTCCA+TGG 0.538733 4_2:-74478602 Msa0622110:CDS
TTTGATTGCACAAGCTTGCA+TGG 0.540945 4_2:-74483631 Msa0622110:CDS
GCTCTGACACAGAGAAATCA+AGG 0.541696 4_2:+74483406 None:intergenic
TCTCTGTGTCAGAGCTTGCA+TGG 0.541979 4_2:-74483398 Msa0622110:CDS
ATGCAGTTGTTGCGTTGGAT+GGG 0.542294 4_2:-74483026 Msa0622110:CDS
ATCAAGACACATGTATTGAA+GGG 0.544777 4_2:-74483284 Msa0622110:intron
CACCTGAAGGTTATATGCCA+TGG 0.546195 4_2:-74478763 Msa0622110:CDS
ATTGCGATTGCTTGTAACAA+TGG 0.557427 4_2:+74482843 None:intergenic
TTACTTGGCTCGTCCATGGA+AGG 0.560591 4_2:-74478834 Msa0622110:CDS
TGCAGATGCAGTTGTTGCGT+TGG 0.563751 4_2:-74483031 Msa0622110:intron
ATCAGTACTAGTTTCATGCA+AGG 0.565775 4_2:+74483128 None:intergenic
TTTGTTATTTACATCAAGGA+GGG 0.568900 4_2:-74479754 Msa0622110:intron
AAAAGTGGCAGTTCGAAAAG+TGG 0.570595 4_2:+74482804 None:intergenic
GACAGTCTCATAGCACATGC+TGG 0.572051 4_2:-74480429 Msa0622110:intron
CAAACACCAGCAGGTATCAC+AGG 0.573478 4_2:-74478740 Msa0622110:CDS
GTTGTTGCTAAGGATGGAAG+TGG 0.573650 4_2:-74479835 Msa0622110:CDS
ATCGCAATTTCATGCAAGGA+TGG 0.575589 4_2:-74482828 Msa0622110:CDS
ATACCTGCTGGTGTTTGCCA+TGG 0.578128 4_2:+74478746 None:intergenic
AACATCATGATCGTTGGTGA+TGG 0.582464 4_2:-74482877 Msa0622110:CDS
GAGTGGGTTGATGACCGTGC+TGG 0.582880 4_2:-74479910 Msa0622110:CDS
GTTCTTGAGAAATCCTTCCA+TGG 0.584983 4_2:+74478821 None:intergenic
TGTGAAGAAGGGACTATACA+AGG 0.586315 4_2:-74482929 Msa0622110:CDS
TCTTGAGTTTGGATGTCTGA+GGG 0.587826 4_2:+74483663 None:intergenic
GTTGTTGCGTTGGATGGGAG+CGG 0.587962 4_2:-74483021 Msa0622110:CDS
AGCAATCGCAATTTCATGCA+AGG 0.589039 4_2:-74482832 Msa0622110:CDS
CATGTTATCTATGTGAAGAA+GGG 0.590596 4_2:-74482940 Msa0622110:CDS
GAAAAGGAAATTCACTAGCA+AGG 0.591237 4_2:+74483740 None:intergenic
CTTAAGAGCCTCAGTGATTG+TGG 0.591740 4_2:+74479804 None:intergenic
ATCACCAACGATCATGATGT+TGG 0.592216 4_2:+74482879 None:intergenic
GGTGATTTGATCACACCTGA+AGG 0.592420 4_2:-74478776 Msa0622110:CDS
ACGAAGGAAACCTCGAAGCA+TGG 0.597380 4_2:-74483326 Msa0622110:CDS
ATGACCAACATCATGATCGT+TGG 0.598022 4_2:-74482883 Msa0622110:CDS
ATCTTGAGTTTGGATGTCTG+AGG 0.599334 4_2:+74483662 None:intergenic
GAAGAGATGAAACAACCTGC+TGG 0.602235 4_2:-74480006 Msa0622110:CDS
GCTCGTTATGAATGTTTGTG+AGG 0.604269 4_2:+74483586 None:intergenic
CAGAACATTACTGATAAGCT+GGG 0.605848 4_2:+74483203 None:intergenic
ACCTTCAAAACCGCTACCGT+TGG 0.610244 4_2:-74479616 Msa0622110:intron
GATGAAAACAACGTGAGTCA+TGG 0.611888 4_2:+74479699 None:intergenic
CTTCTATGGCAAGTTGCTCG+CGG 0.617529 4_2:+74483442 None:intergenic
GCTTACCCTTTAGGTCTCCA+AGG 0.618807 4_2:-74483158 Msa0622110:CDS
ACCATACTTTCAAACTCGTG+AGG 0.619267 4_2:+74480181 None:intergenic
CATGGTCGTTAGGGGAGATG+AGG 0.619966 4_2:-74483380 Msa0622110:CDS
ACTTGCCATAGAAGATTGCA+AGG 0.620029 4_2:-74483433 Msa0622110:CDS
TTTCCATTGACGAATTCCAA+AGG 0.622348 4_2:-74480251 Msa0622110:CDS
TCTATGCATATGAGTAGCAA+TGG 0.623727 4_2:-74480063 Msa0622110:CDS
AAACAGCGTGTAAAATGGCA+AGG 0.624077 4_2:-74478662 Msa0622110:CDS
TGTTTATAAAGAGTATGTTG+AGG 0.626695 4_2:-74479731 Msa0622110:intron
AAGATACCTACCAACGGTAG+CGG 0.629830 4_2:+74479606 None:intergenic
GCACGGTCATCAACCCACTC+AGG 0.630741 4_2:+74479913 None:intergenic
GACAGAACTGCGCAGTACGA+AGG 0.633449 4_2:-74483342 Msa0622110:CDS
GAGATGAGGAGAATTCGAGC+CGG 0.635377 4_2:-74483366 Msa0622110:CDS
TGCTGGTCATAAAATGCAAG+AGG 0.637211 4_2:-74480097 Msa0622110:CDS
ATTTGTTATTTACATCAAGG+AGG 0.639398 4_2:-74479755 Msa0622110:CDS
TGTCTGAGGGAATTTCATCT+GGG 0.640715 4_2:+74483676 None:intergenic
ACATGTTTCTTGGTATGTGA+TGG 0.641994 4_2:+74480149 None:intergenic
GTACTGCGCAGTTCTGTCGC+CGG 0.644383 4_2:+74483347 None:intergenic
AGTTTGAAAGTATGGTTAAG+CGG 0.648997 4_2:-74480174 Msa0622110:CDS
AGAGCTTGCATGGTCGTTAG+GGG 0.652304 4_2:-74483388 Msa0622110:CDS
TGTCTCCTATTGCTATGACT+AGG 0.654035 4_2:+74482961 None:intergenic
CCTCGAAGCATGGCTAAGTG+CGG 0.658255 4_2:-74483316 Msa0622110:CDS
AAAGCCTACGTTAACTGTGA+CGG 0.658857 4_2:+74480566 None:intergenic
AACTCGTGAGGACTCTGTCG+AGG 0.675472 4_2:+74480193 None:intergenic
CTACTTAAATCTAAGCCGCA+CGG 0.678224 4_2:-74483060 Msa0622110:intron
TAACATCGGAACCAGGACCA+CGG 0.684516 4_2:+74478684 None:intergenic
GAAGTTTCCTAACACCAGCA+CGG 0.689688 4_2:+74479896 None:intergenic
GTCGCCGTCACAGTTAACGT+AGG 0.715024 4_2:-74480570 Msa0622110:CDS
TATGCTGAGTACAATAACCG+TGG 0.729093 4_2:-74478701 Msa0622110:CDS
GTTTCCTGAATGGATGACAG+AGG 0.756653 4_2:-74483094 Msa0622110:CDS
AAATTTCACCACAATCACTG+AGG 0.791509 4_2:-74479812 Msa0622110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATATAGTAATAACT+AGG + chr4_2:74480354-74480373 None:intergenic 10.0%
!!! ATTTTTTTCTATAAAAAGAA+GGG + chr4_2:74481023-74481042 None:intergenic 10.0%
!!! AATTTTTTTCTATAAAAAGA+AGG + chr4_2:74481024-74481043 None:intergenic 10.0%
!! TTAAGTGTAAAAAATATATA+GGG + chr4_2:74482813-74482832 None:intergenic 10.0%
!! TTTAAGTGTAAAAAATATAT+AGG + chr4_2:74482814-74482833 None:intergenic 10.0%
!! TTAAAATTCTCAAATAGTTT+AGG + chr4_2:74480637-74480656 None:intergenic 15.0%
!! TAAGTGTAAAAAATATATAG+GGG + chr4_2:74482812-74482831 None:intergenic 15.0%
!! AACAAATAGTATTCATCAAT+TGG + chr4_2:74480321-74480340 None:intergenic 20.0%
!!! AGTAGAATGTAATTAATTTG+TGG - chr4_2:74480512-74480531 Msa0622110:CDS 20.0%
!!! GTAGAATGTAATTAATTTGT+GGG - chr4_2:74480513-74480532 Msa0622110:CDS 20.0%
!! TAGAAATTGTACAATAAAGA+GGG + chr4_2:74480581-74480600 None:intergenic 20.0%
!! ATTATGTAGTATCAAATAGT+TGG + chr4_2:74480808-74480827 None:intergenic 20.0%
!!! TGATAATTTTTTGATCATCT+GGG + chr4_2:74480954-74480973 None:intergenic 20.0%
!!! TTGATAATTTTTTGATCATC+TGG + chr4_2:74480955-74480974 None:intergenic 20.0%
!! ATAATCACATATAACAATGA+AGG + chr4_2:74481400-74481419 None:intergenic 20.0%
!! ATGAGAAAACGTAAATAAAA+TGG - chr4_2:74481436-74481455 Msa0622110:intron 20.0%
!! TGGAGATTGTATTAATAATA+AGG - chr4_2:74481456-74481475 Msa0622110:intron 20.0%
!! TACAATGAGACTTATAATAT+AGG - chr4_2:74481485-74481504 Msa0622110:intron 20.0%
!! ACAATGAGACTTATAATATA+GGG - chr4_2:74481486-74481505 Msa0622110:intron 20.0%
!! TGCTAAATATTAAAAATGTC+TGG - chr4_2:74481601-74481620 Msa0622110:intron 20.0%
!! GCTAAATATTAAAAATGTCT+GGG - chr4_2:74481602-74481621 Msa0622110:intron 20.0%
!! CTAAATATTAAAAATGTCTG+GGG - chr4_2:74481603-74481622 Msa0622110:intron 20.0%
!! TAAATATTAAAAATGTCTGG+GGG - chr4_2:74481604-74481623 Msa0622110:intron 20.0%
!! AAACTTCTTAATAAAATGAC+TGG - chr4_2:74482387-74482406 Msa0622110:intron 20.0%
!!! ATCTTTTTGGATACATATAT+TGG - chr4_2:74483470-74483489 Msa0622110:CDS 20.0%
! TGAATTGGTATATACTGAAT+TGG - chr4_2:74479588-74479607 Msa0622110:intron 25.0%
!! AATCCAAGATAGTTATGTTT+TGG - chr4_2:74479969-74479988 Msa0622110:intron 25.0%
! CCATCATTAATCAAAGAAAA+TGG + chr4_2:74480425-74480444 None:intergenic 25.0%
!! CCATTTTCTTTGATTAATGA+TGG - chr4_2:74480422-74480441 Msa0622110:intron 25.0%
! GTAGAAATTGTACAATAAAG+AGG + chr4_2:74480582-74480601 None:intergenic 25.0%
! AATTATGTGTCTCAATTGTT+TGG - chr4_2:74480833-74480852 Msa0622110:intron 25.0%
! TTCATGAAATAAGCTAAACA+AGG - chr4_2:74480891-74480910 Msa0622110:intron 25.0%
! AAATCAGTTGAAAAAATGTG+AGG + chr4_2:74481080-74481099 None:intergenic 25.0%
! ATAGAAAAACACACTTTGAA+GGG - chr4_2:74481185-74481204 Msa0622110:intron 25.0%
! GTAACAATATGATGAAATGA+AGG + chr4_2:74481243-74481262 None:intergenic 25.0%
! TGTATATAAGAATGTCCTTA+AGG + chr4_2:74481303-74481322 None:intergenic 25.0%
!!! ATAAAACAATTTGTTGTACC+GGG + chr4_2:74481334-74481353 None:intergenic 25.0%
!!! CATAAAACAATTTGTTGTAC+CGG + chr4_2:74481335-74481354 None:intergenic 25.0%
! ACGTATCTAATATAGATTGA+AGG - chr4_2:74481564-74481583 Msa0622110:intron 25.0%
!! TTTGGAAAGTTGGTTAATAA+TGG + chr4_2:74482235-74482254 None:intergenic 25.0%
!! TGTTTATAAAGAGTATGTTG+AGG - chr4_2:74482536-74482555 Msa0622110:intron 25.0%
!!! GACTTTATTTTACAATCTGA+TGG + chr4_2:74482748-74482767 None:intergenic 25.0%
! ATAAGTACATATAACGAGTT+GGG + chr4_2:74482996-74483015 None:intergenic 25.0%
! AATAAGTACATATAACGAGT+TGG + chr4_2:74482997-74483016 None:intergenic 25.0%
!! AATTTTCTACAAATGCAGAA+TGG - chr4_2:74483142-74483161 Msa0622110:CDS 25.0%
!! TTTCTCAAGAACTATCTTTT+TGG - chr4_2:74483457-74483476 Msa0622110:CDS 25.0%
GTAAAAGGATGAGAATGAAA+AGG + chr4_2:74478546-74478565 None:intergenic 30.0%
CTTGATCAAATGATGGTAAA+AGG + chr4_2:74478561-74478580 None:intergenic 30.0%
AATCAAGACACATGTATTGA+AGG - chr4_2:74478982-74479001 Msa0622110:intron 30.0%
ATCAAGACACATGTATTGAA+GGG - chr4_2:74478983-74479002 Msa0622110:intron 30.0%
!! AACTAGTACTGATGAAAGTT+TGG - chr4_2:74479149-74479168 Msa0622110:intron 30.0%
ACATGTTATCTATGTGAAGA+AGG - chr4_2:74479326-74479345 Msa0622110:intron 30.0%
CATGTTATCTATGTGAAGAA+GGG - chr4_2:74479327-74479346 Msa0622110:intron 30.0%
! ACACACTCTTTTCAATATGT+AGG + chr4_2:74479561-74479580 None:intergenic 30.0%
!! GAACCATAGACTTCATTTTT+GGG - chr4_2:74479830-74479849 Msa0622110:CDS 30.0%
ATTCCCAAAAATGAAGTCTA+TGG + chr4_2:74479836-74479855 None:intergenic 30.0%
!! ATAGACTTCATTTTTGGGAA+TGG - chr4_2:74479835-74479854 Msa0622110:CDS 30.0%
! GTGATTGTAACCTTTTGTAA+TGG + chr4_2:74479907-74479926 None:intergenic 30.0%
TAACACATACATGAGTAGTA+TGG - chr4_2:74480050-74480069 Msa0622110:CDS 30.0%
TCTTTAATGACATGATAACC+AGG + chr4_2:74480189-74480208 None:intergenic 30.0%
ATAGTATTCATCAATTGGCT+TGG + chr4_2:74480316-74480335 None:intergenic 30.0%
TCTACCTAAGAATTGAACTT+GGG + chr4_2:74480751-74480770 None:intergenic 30.0%
TTCTACCTAAGAATTGAACT+TGG + chr4_2:74480752-74480771 None:intergenic 30.0%
TTCTTAGGTAGAACAATTCT+TGG - chr4_2:74480759-74480778 Msa0622110:intron 30.0%
!! TTGAGAGTATTGCTATACAT+AGG - chr4_2:74480982-74481001 Msa0622110:intron 30.0%
TTCTATAAAAAGAAGGGACA+CGG + chr4_2:74481017-74481036 None:intergenic 30.0%
AGTTGAAAAAATGTGAGGTT+TGG + chr4_2:74481075-74481094 None:intergenic 30.0%
ATGATGAACAATTTCAGAGT+TGG + chr4_2:74481105-74481124 None:intergenic 30.0%
GATAGAAAAACACACTTTGA+AGG - chr4_2:74481184-74481203 Msa0622110:intron 30.0%
! ATACGTACTTGGTGAAAAAA+GGG + chr4_2:74481278-74481297 None:intergenic 30.0%
!! TATAGATTGAAGGTGTTGAT+AGG - chr4_2:74481574-74481593 Msa0622110:intron 30.0%
!! ATAGATTGAAGGTGTTGATA+GGG - chr4_2:74481575-74481594 Msa0622110:intron 30.0%
TACCTTCTTATTAGTTGCTA+TGG - chr4_2:74481672-74481691 Msa0622110:intron 30.0%
AACCATAGCAACTAATAAGA+AGG + chr4_2:74481677-74481696 None:intergenic 30.0%
TTTAACAACAAAAAGGAACC+TGG - chr4_2:74481721-74481740 Msa0622110:intron 30.0%
! CATTCCTTTTTGTAATCTGT+TGG + chr4_2:74481814-74481833 None:intergenic 30.0%
AGATTACAAAAAGGAATGTG+AGG - chr4_2:74481816-74481835 Msa0622110:intron 30.0%
! AGTTTGAAAGTATGGTTAAG+CGG - chr4_2:74482093-74482112 Msa0622110:intron 30.0%
! TTTCATCTCTTCGAATGTTT+TGG + chr4_2:74482253-74482272 None:intergenic 30.0%
TTCTTAATAAAATGACTGGC+AGG - chr4_2:74482391-74482410 Msa0622110:intron 30.0%
!! AATGGCTTCAAGTTTTTCTT+GGG + chr4_2:74482495-74482514 None:intergenic 30.0%
!! AAATGGCTTCAAGTTTTTCT+TGG + chr4_2:74482496-74482515 None:intergenic 30.0%
GGCAATAAAAACTTCATTGA+TGG - chr4_2:74482621-74482640 Msa0622110:intron 30.0%
AAAAACTTCATTGATGGAGT+TGG - chr4_2:74482627-74482646 Msa0622110:intron 30.0%
AATAAAGTCTGCAAATCTGT+TGG - chr4_2:74482759-74482778 Msa0622110:intron 30.0%
TTAATCTAGAAGTCTACAGT+TGG + chr4_2:74482864-74482883 None:intergenic 30.0%
ATCCAATTTAGCAAATCGTT+GGG - chr4_2:74482936-74482955 Msa0622110:CDS 30.0%
TAAGTACATATAACGAGTTG+GGG + chr4_2:74482995-74483014 None:intergenic 30.0%
ATTACTGGAGATTTCTTTGT+TGG - chr4_2:74483041-74483060 Msa0622110:intron 30.0%
AGAAAATTGATCTGTCAGAT+TGG + chr4_2:74483130-74483149 None:intergenic 30.0%
AGTCTAACTGGATAGTATTT+GGG + chr4_2:74483401-74483420 None:intergenic 30.0%
! TTTTACACGCTGTTTAACAT+CGG + chr4_2:74483600-74483619 None:intergenic 30.0%
ATGTTAAACAGCGTGTAAAA+TGG - chr4_2:74483600-74483619 Msa0622110:CDS 30.0%
GTTAAGACTATTACTTCAGA+AGG - chr4_2:74483629-74483648 Msa0622110:CDS 30.0%
GAAAAGGAAATTCACTAGCA+AGG + chr4_2:74478530-74478549 None:intergenic 35.0%
GAGAGAACTTGATCAAATGA+TGG + chr4_2:74478568-74478587 None:intergenic 35.0%
AAGCTTGCATATCTTGAGTT+TGG + chr4_2:74478618-74478637 None:intergenic 35.0%
TTAATGACAGAAGTTGGACT+TGG + chr4_2:74478724-74478743 None:intergenic 35.0%
GATCTTTGTCATGTTGTTGA+TGG + chr4_2:74478785-74478804 None:intergenic 35.0%
ACATGTATTGAAGGGTTTGA+AGG - chr4_2:74478991-74479010 Msa0622110:intron 35.0%
CAGAACATTACTGATAAGCT+GGG + chr4_2:74479067-74479086 None:intergenic 35.0%
ACAGAACATTACTGATAAGC+TGG + chr4_2:74479068-74479087 None:intergenic 35.0%
! ATCAGTACTAGTTTCATGCA+AGG + chr4_2:74479142-74479161 None:intergenic 35.0%
! AAAGTTTGGAGTTTCCTGAA+TGG - chr4_2:74479163-74479182 Msa0622110:intron 35.0%
! TAACAGCTTCGTTGATTGTA+CGG + chr4_2:74479278-74479297 None:intergenic 35.0%
ATTGCGATTGCTTGTAACAA+TGG + chr4_2:74479427-74479446 None:intergenic 35.0%
AGAACTCTACTTACCAAAAG+TGG + chr4_2:74479481-74479500 None:intergenic 35.0%
AACAGTATTTCTCTAGCGTA+AGG - chr4_2:74479506-74479525 Msa0622110:intron 35.0%
GAGTGTGTTAGAGAATGAAT+TGG - chr4_2:74479573-74479592 Msa0622110:intron 35.0%
TGTTAATGTGTAGCTGTATC+TGG - chr4_2:74479625-74479644 Msa0622110:CDS 35.0%
GTTAATGTGTAGCTGTATCT+GGG - chr4_2:74479626-74479645 Msa0622110:CDS 35.0%
TACACCTAAAGAATGCAGAT+TGG + chr4_2:74479738-74479757 None:intergenic 35.0%
TTCTTTAGGTGTAGCATAGA+AGG - chr4_2:74479745-74479764 Msa0622110:intron 35.0%
TTCCATAGATTTCGCATTCA+CGG + chr4_2:74479813-74479832 None:intergenic 35.0%
! GGAACCATAGACTTCATTTT+TGG - chr4_2:74479829-74479848 Msa0622110:CDS 35.0%
AGTTCCACTTCCATTACAAA+AGG - chr4_2:74479894-74479913 Msa0622110:CDS 35.0%
!! GTAACCTTTTGTAATGGAAG+TGG + chr4_2:74479901-74479920 None:intergenic 35.0%
AGGCCAAAACATAACTATCT+TGG + chr4_2:74479975-74479994 None:intergenic 35.0%
!! GTTCTAGAATATTCCTTCCA+AGG + chr4_2:74480021-74480040 None:intergenic 35.0%
ACTTTGCATTAGACACTTTG+TGG - chr4_2:74480106-74480125 Msa0622110:CDS 35.0%
TACGGTGAATACAGGAATTA+TGG - chr4_2:74480129-74480148 Msa0622110:CDS 35.0%
TGTTTAGTGAGTAGATGTTG+AGG - chr4_2:74480462-74480481 Msa0622110:CDS 35.0%
TGCAGATATAGTGTATGGAT+CGG - chr4_2:74480536-74480555 Msa0622110:CDS 35.0%
TAACCACTTGAACACTTGTT+TGG + chr4_2:74480694-74480713 None:intergenic 35.0%
AGAACCCAAGTTCAATTCTT+AGG - chr4_2:74480744-74480763 Msa0622110:intron 35.0%
CATCTGGGTTTAGCTAATTA+AGG + chr4_2:74480939-74480958 None:intergenic 35.0%
! GAGTATTGCTATACATAGGT+TGG - chr4_2:74480986-74481005 Msa0622110:intron 35.0%
! ATGAAATGAAGGACTTGTTC+AGG + chr4_2:74481232-74481251 None:intergenic 35.0%
! GATACGTACTTGGTGAAAAA+AGG + chr4_2:74481279-74481298 None:intergenic 35.0%
CTTATATACATTCCATCTCC+CGG - chr4_2:74481313-74481332 Msa0622110:intron 35.0%
ATATTAAAAATGTCTGGGGG+AGG - chr4_2:74481607-74481626 Msa0622110:intron 35.0%
AATAAGAGACTCGCCATAAT+TGG - chr4_2:74481643-74481662 Msa0622110:intron 35.0%
! CGTAGGCTTTAACAACAAAA+AGG - chr4_2:74481714-74481733 Msa0622110:intron 35.0%
! TTTGAAGTTTGATCTTCTCC+AGG + chr4_2:74481742-74481761 None:intergenic 35.0%
AAAAACTCATCTCCTTCAAG+AGG - chr4_2:74481936-74481955 Msa0622110:intron 35.0%
TTTCCATTGACGAATTCCAA+AGG - chr4_2:74482016-74482035 Msa0622110:intron 35.0%
AATTCCAAAGGTCACTAGAA+AGG - chr4_2:74482028-74482047 Msa0622110:intron 35.0%
ACATGTTTCTTGGTATGTGA+TGG + chr4_2:74482121-74482140 None:intergenic 35.0%
CACATACCAAGAAACATGTT+TGG - chr4_2:74482122-74482141 Msa0622110:intron 35.0%
AAGCATCCAAACATGTTTCT+TGG + chr4_2:74482131-74482150 None:intergenic 35.0%
! TTGCATTTTATGACCAGCAT+CGG + chr4_2:74482169-74482188 None:intergenic 35.0%
TCTATGCATATGAGTAGCAA+TGG - chr4_2:74482204-74482223 Msa0622110:intron 35.0%
!!! CTTCGAATGTTTTGGAAAGT+TGG + chr4_2:74482245-74482264 None:intergenic 35.0%
!!! CTTTTGAAGGAAAGTGTTGA+TGG - chr4_2:74482291-74482310 Msa0622110:intron 35.0%
AAATTTCACCACAATCACTG+AGG - chr4_2:74482455-74482474 Msa0622110:intron 35.0%
!! ATGACTCACGTTGTTTTCAT+CGG - chr4_2:74482570-74482589 Msa0622110:intron 35.0%
TCATGCTTAAGTTATGTGCA+TGG - chr4_2:74482684-74482703 Msa0622110:intron 35.0%
ATCATCTACAAACAGCTGTA+TGG - chr4_2:74482833-74482852 Msa0622110:CDS 35.0%
TAAATTGGATCCACTAAGGT+CGG + chr4_2:74482926-74482945 None:intergenic 35.0%
TTGCTAAATTGGATCCACTA+AGG + chr4_2:74482930-74482949 None:intergenic 35.0%
GATCCAATTTAGCAAATCGT+TGG - chr4_2:74482935-74482954 Msa0622110:CDS 35.0%
!! ATCCCAACGATTTGCTAAAT+TGG + chr4_2:74482941-74482960 None:intergenic 35.0%
AATTTAGCAAATCGTTGGGA+TGG - chr4_2:74482940-74482959 Msa0622110:CDS 35.0%
! ATAACGAGTTGGGGAAAAAA+TGG + chr4_2:74482986-74483005 None:intergenic 35.0%
CATTGAATTGCAGCTATTAC+TGG - chr4_2:74483026-74483045 Msa0622110:CDS 35.0%
!! TTCTTTGTTGGCATTGGTAT+TGG - chr4_2:74483053-74483072 Msa0622110:intron 35.0%
!!! ATTGGTTTTGAAAACTCTGC+TGG - chr4_2:74483071-74483090 Msa0622110:CDS 35.0%
TTCTACAAATGCAGAATGGA+TGG - chr4_2:74483146-74483165 Msa0622110:CDS 35.0%
TACCTGAGATAACACAATCA+CGG + chr4_2:74483214-74483233 None:intergenic 35.0%
!!! ATGCATTGTTGGTTTTCCAA+TGG + chr4_2:74483302-74483321 None:intergenic 35.0%
AAGGAAAAAAACCAACCATC+AGG - chr4_2:74483341-74483360 Msa0622110:CDS 35.0%
GAGTCTAACTGGATAGTATT+TGG + chr4_2:74483402-74483421 None:intergenic 35.0%
ACTCAAGAACAAAGCTTACT+TGG - chr4_2:74483418-74483437 Msa0622110:CDS 35.0%
TGTCTGAGGGAATTTCATCT+GGG + chr4_2:74478594-74478613 None:intergenic 40.0%
ATGTCTGAGGGAATTTCATC+TGG + chr4_2:74478595-74478614 None:intergenic 40.0%
TCTTGAGTTTGGATGTCTGA+GGG + chr4_2:74478607-74478626 None:intergenic 40.0%
ATCTTGAGTTTGGATGTCTG+AGG + chr4_2:74478608-74478627 None:intergenic 40.0%
TTTGATTGCACAAGCTTGCA+TGG - chr4_2:74478636-74478655 Msa0622110:CDS 40.0%
! TGTTTGTGAGGCATGAGTTT+TGG + chr4_2:74478672-74478691 None:intergenic 40.0%
GCTCGTTATGAATGTTTGTG+AGG + chr4_2:74478684-74478703 None:intergenic 40.0%
GCAGCATTAATGACAGAAGT+TGG + chr4_2:74478730-74478749 None:intergenic 40.0%
ACCACAATCAATGAAGCCAT+AGG - chr4_2:74478757-74478776 Msa0622110:CDS 40.0%
! ACCTATGGCTTCATTGATTG+TGG + chr4_2:74478761-74478780 None:intergenic 40.0%
ACTTGCCATAGAAGATTGCA+AGG - chr4_2:74478834-74478853 Msa0622110:CDS 40.0%
CGTCTTGAGAGTTACATTAG+TGG - chr4_2:74479024-74479043 Msa0622110:intron 40.0%
AGCTTAATCGCTTACCCTTT+AGG - chr4_2:74479100-74479119 Msa0622110:intron 40.0%
CTACTTAAATCTAAGCCGCA+CGG - chr4_2:74479207-74479226 Msa0622110:intron 40.0%
TGTCTCCTATTGCTATGACT+AGG + chr4_2:74479309-74479328 None:intergenic 40.0%
TGTGAAGAAGGGACTATACA+AGG - chr4_2:74479338-74479357 Msa0622110:intron 40.0%
ATGACCAACATCATGATCGT+TGG - chr4_2:74479384-74479403 Msa0622110:intron 40.0%
ATCACCAACGATCATGATGT+TGG + chr4_2:74479391-74479410 None:intergenic 40.0%
! AACATCATGATCGTTGGTGA+TGG - chr4_2:74479390-74479409 Msa0622110:intron 40.0%
!! ATGATCGTTGGTGATGGTAT+TGG - chr4_2:74479396-74479415 Msa0622110:intron 40.0%
AGCAATCGCAATTTCATGCA+AGG - chr4_2:74479435-74479454 Msa0622110:intron 40.0%
ATCGCAATTTCATGCAAGGA+TGG - chr4_2:74479439-74479458 Msa0622110:intron 40.0%
AAAAGTGGCAGTTCGAAAAG+TGG + chr4_2:74479466-74479485 None:intergenic 40.0%
!!! ACTTTTCGAACTGCCACTTT+TGG - chr4_2:74479465-74479484 Msa0622110:intron 40.0%
CAGACCAATCTGCATTCTTT+AGG - chr4_2:74479731-74479750 Msa0622110:intron 40.0%
TACCGTGAATGCGAAATCTA+TGG - chr4_2:74479808-74479827 Msa0622110:CDS 40.0%
AAGGTTACAATCACAGCTCA+AGG - chr4_2:74479913-74479932 Msa0622110:CDS 40.0%
TTACAATCACAGCTCAAGGT+AGG - chr4_2:74479917-74479936 Msa0622110:CDS 40.0%
AAAAGTCCACATCAAAGCAC+AGG - chr4_2:74479940-74479959 Msa0622110:intron 40.0%
GCCTCACAACCTACATATTT+GGG - chr4_2:74479991-74480010 Msa0622110:CDS 40.0%
CCTCACAACCTACATATTTG+GGG - chr4_2:74479992-74480011 Msa0622110:CDS 40.0%
GCATTAGACACTTTGTGGTA+CGG - chr4_2:74480111-74480130 Msa0622110:CDS 40.0%
GAATACAGGAATTATGGACC+CGG - chr4_2:74480135-74480154 Msa0622110:CDS 40.0%
GTGAACTTAACACCTGTTCT+AGG + chr4_2:74480270-74480289 None:intergenic 40.0%
GCAGATATAGTGTATGGATC+GGG - chr4_2:74480537-74480556 Msa0622110:CDS 40.0%
CACTTGAACACTTGTTTGGT+TGG + chr4_2:74480690-74480709 None:intergenic 40.0%
CAACCAAACAAGTGTTCAAG+TGG - chr4_2:74480688-74480707 Msa0622110:intron 40.0%
TATCAAATAGTTGGTCCGTG+GGG + chr4_2:74480799-74480818 None:intergenic 40.0%
GTATCAAATAGTTGGTCCGT+GGG + chr4_2:74480800-74480819 None:intergenic 40.0%
AGTATCAAATAGTTGGTCCG+TGG + chr4_2:74480801-74480820 None:intergenic 40.0%
GCCTTAATAAGCGTCAAACA+AGG - chr4_2:74480913-74480932 Msa0622110:intron 40.0%
!! GCCTTGTTTGACGCTTATTA+AGG + chr4_2:74480917-74480936 None:intergenic 40.0%
ACCAAGTACGTATCTCCTTA+AGG - chr4_2:74481285-74481304 Msa0622110:intron 40.0%
TCCTTAAGGAGATACGTACT+TGG + chr4_2:74481289-74481308 None:intergenic 40.0%
GAAGGTAGAGACACCAATTA+TGG + chr4_2:74481659-74481678 None:intergenic 40.0%
AAAGCCTACGTTAACTGTGA+CGG + chr4_2:74481704-74481723 None:intergenic 40.0%
CGCACCAACAGATTACAAAA+AGG - chr4_2:74481807-74481826 Msa0622110:intron 40.0%
! GCGATCTTGATGAGTTCTTT+TGG + chr4_2:74481877-74481896 None:intergenic 40.0%
!!! CATCTTTTTCAGCCTCTTGA+AGG + chr4_2:74481951-74481970 None:intergenic 40.0%
!! TGACCTTTGGAATTCGTCAA+TGG + chr4_2:74482022-74482041 None:intergenic 40.0%
! TGAACCTTTCTAGTGACCTT+TGG + chr4_2:74482035-74482054 None:intergenic 40.0%
TCCTCACGAGTTTGAAAGTA+TGG - chr4_2:74482085-74482104 Msa0622110:intron 40.0%
ACCATACTTTCAAACTCGTG+AGG + chr4_2:74482089-74482108 None:intergenic 40.0%
TGCTGGTCATAAAATGCAAG+AGG - chr4_2:74482170-74482189 Msa0622110:intron 40.0%
! GATGGAGAAGAGGATGTTTT+AGG - chr4_2:74482309-74482328 Msa0622110:intron 40.0%
!! GAAGAGGATGTTTTAGGTCA+TGG - chr4_2:74482315-74482334 Msa0622110:intron 40.0%
! TGATTTTGAGCTTCCTGAGT+GGG - chr4_2:74482341-74482360 Msa0622110:intron 40.0%
! CATGTTGTTGTTGCTAAGGA+TGG - chr4_2:74482426-74482445 Msa0622110:intron 40.0%
GATGAAAACAACGTGAGTCA+TGG + chr4_2:74482571-74482590 None:intergenic 40.0%
GCATGAAAGATACCTACCAA+CGG + chr4_2:74482670-74482689 None:intergenic 40.0%
GGAGATTTCTTTGTTGGCAT+TGG - chr4_2:74483047-74483066 Msa0622110:intron 40.0%
TATGAGCGTAAAGTGTGTCT+TGG + chr4_2:74483175-74483194 None:intergenic 40.0%
TACCGTGATTGTGTTATCTC+AGG - chr4_2:74483209-74483228 Msa0622110:CDS 40.0%
ATCACCAAAGACGAAGTCAA+TGG + chr4_2:74483237-74483256 None:intergenic 40.0%
!!! GTTGGTTTTCCAATGGCTTT+CGG + chr4_2:74483295-74483314 None:intergenic 40.0%
GGATGATTAATCCTGATGGT+TGG + chr4_2:74483355-74483374 None:intergenic 40.0%
CCTTGGATGATTAATCCTGA+TGG + chr4_2:74483359-74483378 None:intergenic 40.0%
CCATCAGGATTAATCATCCA+AGG - chr4_2:74483356-74483375 Msa0622110:CDS 40.0%
TCAGGATTAATCATCCAAGG+AGG - chr4_2:74483359-74483378 Msa0622110:CDS 40.0%
! GCTTTGTTCTTGAGTCTAAC+TGG + chr4_2:74483413-74483432 None:intergenic 40.0%
GTTCTTGAGAAATCCTTCCA+TGG + chr4_2:74483449-74483468 None:intergenic 40.0%
TATGCTGAGTACAATAACCG+TGG - chr4_2:74483566-74483585 Msa0622110:CDS 40.0%
AAACAGCGTGTAAAATGGCA+AGG - chr4_2:74483605-74483624 Msa0622110:CDS 40.0%
!!! CAGCTAGTTTTGTGCCAATT+AGG - chr4_2:74483654-74483673 Msa0622110:CDS 40.0%
TCTCCATGGAAGAACCTAAT+TGG + chr4_2:74483671-74483690 None:intergenic 40.0%
TCCATGGAGATGATTGGATT+AGG - chr4_2:74483681-74483700 Msa0622110:CDS 40.0%
CCATGGAGATGATTGGATTA+GGG - chr4_2:74483682-74483701 Msa0622110:CDS 40.0%
ACTAGAGTTCCTTATTCTCC+AGG - chr4_2:74483707-74483726 Msa0622110:CDS 40.0%
CATAACGAGCTAACCAGAAC+AGG - chr4_2:74478694-74478713 Msa0622110:CDS 45.0%
TGACAGAAGTTGGACTTGGA+GGG + chr4_2:74478720-74478739 None:intergenic 45.0%
ATGACAGAAGTTGGACTTGG+AGG + chr4_2:74478721-74478740 None:intergenic 45.0%
!! CATGTTGTTGATGGCACCTA+TGG + chr4_2:74478776-74478795 None:intergenic 45.0%
GAGCTCCTTGCAATCTTCTA+TGG + chr4_2:74478842-74478861 None:intergenic 45.0%
GCTCTGACACAGAGAAATCA+AGG + chr4_2:74478864-74478883 None:intergenic 45.0%
GTGTTCCTTGGAGACCTAAA+GGG + chr4_2:74479117-74479136 None:intergenic 45.0%
AGTGTTCCTTGGAGACCTAA+AGG + chr4_2:74479118-74479137 None:intergenic 45.0%
TCATGCAAGGTAGTGTTCCT+TGG + chr4_2:74479129-74479148 None:intergenic 45.0%
GTTTCCTGAATGGATGACAG+AGG - chr4_2:74479173-74479192 Msa0622110:intron 45.0%
ATGCAGTTGTTGCGTTGGAT+GGG - chr4_2:74479241-74479260 Msa0622110:intron 45.0%
CAGCTCCTAGTCATAGCAAT+AGG - chr4_2:74479301-74479320 Msa0622110:intron 45.0%
ATGTGTAGCTGTATCTGGGA+AGG - chr4_2:74479630-74479649 Msa0622110:CDS 45.0%
TGTGTAGCTGTATCTGGGAA+GGG - chr4_2:74479631-74479650 Msa0622110:CDS 45.0%
TGGGAAGGGTTTCATTGCAA+GGG - chr4_2:74479645-74479664 Msa0622110:CDS 45.0%
TTGCAAGGGACATGACATTC+CGG - chr4_2:74479659-74479678 Msa0622110:CDS 45.0%
AGTGTGCGTAAAGTGTGTCT+TGG + chr4_2:74479774-74479793 None:intergenic 45.0%
GGCCTCACAACCTACATATT+TGG - chr4_2:74479990-74480009 Msa0622110:CDS 45.0%
CCCCAAATATGTAGGTTGTG+AGG + chr4_2:74479995-74480014 None:intergenic 45.0%
CACAACCTACATATTTGGGG+AGG - chr4_2:74479995-74480014 Msa0622110:CDS 45.0%
AGTAGTATGGTTCAACCTCG+AGG - chr4_2:74480063-74480082 Msa0622110:CDS 45.0%
GTAGTATGGTTCAACCTCGA+GGG - chr4_2:74480064-74480083 Msa0622110:CDS 45.0%
CTTTGTGGTACGGTGAATAC+AGG - chr4_2:74480121-74480140 Msa0622110:CDS 45.0%
!! TTCTGCCGCCGGTTATTTTA+CGG - chr4_2:74480212-74480231 Msa0622110:CDS 45.0%
CTGAACCGTAAAATAACCGG+CGG + chr4_2:74480220-74480239 None:intergenic 45.0%
CCGCTGAACCGTAAAATAAC+CGG + chr4_2:74480223-74480242 None:intergenic 45.0%
!! CCGGTTATTTTACGGTTCAG+CGG - chr4_2:74480220-74480239 Msa0622110:intron 45.0%
ACAGGTGTTAAGTTCACAGC+AGG - chr4_2:74480273-74480292 Msa0622110:CDS 45.0%
CAGGTGTTAAGTTCACAGCA+GGG - chr4_2:74480274-74480293 Msa0622110:CDS 45.0%
GTGGGTGCAGATATAGTGTA+TGG - chr4_2:74480531-74480550 Msa0622110:CDS 45.0%
! CACACTTTGAAGGGCTTTGA+AGG - chr4_2:74481194-74481213 Msa0622110:intron 45.0%
!! ACTTTGAAGGGCTTTGAAGG+AGG - chr4_2:74481197-74481216 Msa0622110:intron 45.0%
!! CAATTTGTTGTACCGGGAGA+TGG + chr4_2:74481328-74481347 None:intergenic 45.0%
AGAGTCACGCGTATCTCAAT+CGG - chr4_2:74481762-74481781 Msa0622110:intron 45.0%
ACCATCGCAAAAATCAGCGA+AGG - chr4_2:74481907-74481926 Msa0622110:intron 45.0%
!!! TCCTTCGCTGATTTTTGCGA+TGG + chr4_2:74481911-74481930 None:intergenic 45.0%
GAGAATACTACAACCGATGC+TGG - chr4_2:74482153-74482172 Msa0622110:intron 45.0%
GAAGAGATGAAACAACCTGC+TGG - chr4_2:74482261-74482280 Msa0622110:intron 45.0%
!! GGAAAGTGTTGATGGAGAAG+AGG - chr4_2:74482299-74482318 Msa0622110:intron 45.0%
!! GAGGATGTTTTAGGTCATGG+TGG - chr4_2:74482318-74482337 Msa0622110:intron 45.0%
! GTGATTTTGAGCTTCCTGAG+TGG - chr4_2:74482340-74482359 Msa0622110:intron 45.0%
GAAGTTTCCTAACACCAGCA+CGG + chr4_2:74482374-74482393 None:intergenic 45.0%
AATGACTGGCAGGAAACTTC+AGG - chr4_2:74482401-74482420 Msa0622110:intron 45.0%
! GGCTCATGTTGTTGTTGCTA+AGG - chr4_2:74482422-74482441 Msa0622110:intron 45.0%
GTTGTTGCTAAGGATGGAAG+TGG - chr4_2:74482432-74482451 Msa0622110:intron 45.0%
CTTAAGAGCCTCAGTGATTG+TGG + chr4_2:74482466-74482485 None:intergenic 45.0%
!! CACGTTGTTTTCATCGGTGA+TGG - chr4_2:74482576-74482595 Msa0622110:intron 45.0%
!! GTTGTTTTCATCGGTGATGG+TGG - chr4_2:74482579-74482598 Msa0622110:intron 45.0%
GGTAGAAAGACACGCATTAC+TGG - chr4_2:74482600-74482619 Msa0622110:intron 45.0%
AAGATACCTACCAACGGTAG+CGG + chr4_2:74482664-74482683 None:intergenic 45.0%
! GCAACTGCTTGATGCTTTTC+TGG + chr4_2:74483098-74483117 None:intergenic 45.0%
TCTGTCAGATTGGACTCTCA+AGG + chr4_2:74483120-74483139 None:intergenic 45.0%
ATCACGGTAGAATTGACGCA+TGG + chr4_2:74483198-74483217 None:intergenic 45.0%
!! GGTACCATTGACTTCGTCTT+TGG - chr4_2:74483230-74483249 Msa0622110:CDS 45.0%
!!! GCAGTTTTGGAGAACAGCAA+TGG + chr4_2:74483261-74483280 None:intergenic 45.0%
GTGCAGTCACAATGCATTGT+TGG + chr4_2:74483313-74483332 None:intergenic 45.0%
CAATGCATTGTGACTGCACA+AGG - chr4_2:74483314-74483333 Msa0622110:CDS 45.0%
CATCCAAGGAGGTTCAATTG+TGG - chr4_2:74483370-74483389 Msa0622110:CDS 45.0%
GGTGATTTGATCACACCTGA+AGG - chr4_2:74483491-74483510 Msa0622110:CDS 45.0%
CACCTGAAGGTTATATGCCA+TGG - chr4_2:74483504-74483523 Msa0622110:intron 45.0%
TGCCATGGCATATAACCTTC+AGG + chr4_2:74483509-74483528 None:intergenic 45.0%
GTGCCAATTAGGTTCTTCCA+TGG - chr4_2:74483665-74483684 Msa0622110:CDS 45.0%
GGTTCTTCCATGGAGATGAT+TGG - chr4_2:74483675-74483694 Msa0622110:CDS 45.0%
CCCTAATCCAATCATCTCCA+TGG + chr4_2:74483685-74483704 None:intergenic 45.0%
TTAGTCGCTCCTGGAGAATA+AGG + chr4_2:74483719-74483738 None:intergenic 45.0%
!! CAATGAGTTGGTCTTGAAGG+AGG + chr4_2:74483746-74483765 None:intergenic 45.0%
CTTCTATGGCAAGTTGCTCG+CGG + chr4_2:74478828-74478847 None:intergenic 50.0%
TCTCTGTGTCAGAGCTTGCA+TGG - chr4_2:74478869-74478888 Msa0622110:intron 50.0%
TCAGAGCTTGCATGGTCGTT+AGG - chr4_2:74478877-74478896 Msa0622110:intron 50.0%
CAGAGCTTGCATGGTCGTTA+GGG - chr4_2:74478878-74478897 Msa0622110:intron 50.0%
AGAGCTTGCATGGTCGTTAG+GGG - chr4_2:74478879-74478898 Msa0622110:intron 50.0%
GAGATGAGGAGAATTCGAGC+CGG - chr4_2:74478901-74478920 Msa0622110:intron 50.0%
ACGAAGGAAACCTCGAAGCA+TGG - chr4_2:74478941-74478960 Msa0622110:intron 50.0%
GCTTACCCTTTAGGTCTCCA+AGG - chr4_2:74479109-74479128 Msa0622110:intron 50.0%
TCAGCCTCTGTCATCCATTC+AGG + chr4_2:74479180-74479199 None:intergenic 50.0%
GCATCTGCAATCTTACCGTG+CGG + chr4_2:74479225-74479244 None:intergenic 50.0%
TGCAGATGCAGTTGTTGCGT+TGG - chr4_2:74479236-74479255 Msa0622110:intron 50.0%
GATGCAGTTGTTGCGTTGGA+TGG - chr4_2:74479240-74479259 Msa0622110:intron 50.0%
CTGGGAAGGGTTTCATTGCA+AGG - chr4_2:74479644-74479663 Msa0622110:CDS 50.0%
ATGACATTCCGGAACACTGC+TGG - chr4_2:74479670-74479689 Msa0622110:CDS 50.0%
TGAATCGACACGCAATGCCA+CGG + chr4_2:74479713-74479732 None:intergenic 50.0%
GTGAAGCCTGTGCTTTGATG+TGG + chr4_2:74479949-74479968 None:intergenic 50.0%
CAAGGCCTCCCCAAATATGT+AGG + chr4_2:74480003-74480022 None:intergenic 50.0%
CTACATATTTGGGGAGGCCT+TGG - chr4_2:74480001-74480020 Msa0622110:CDS 50.0%
ATATTTGGGGAGGCCTTGGA+AGG - chr4_2:74480005-74480024 Msa0622110:CDS 50.0%
ATTAAAGACGCTTCTGCCGC+CGG - chr4_2:74480201-74480220 Msa0622110:CDS 50.0%
ACGGTTCAGCGGTTCCTTAA+CGG - chr4_2:74480231-74480250 Msa0622110:intron 50.0%
GGTTCATGGTTGCCTAGAAC+AGG - chr4_2:74480255-74480274 Msa0622110:CDS 50.0%
TGAGCTTCACCAAGAGCGAA+TGG - chr4_2:74480715-74480734 Msa0622110:intron 50.0%
TCACCAAGAGCGAATGGTTC+AGG - chr4_2:74480721-74480740 Msa0622110:intron 50.0%
TCTCCTGAACCATTCGCTCT+TGG + chr4_2:74480727-74480746 None:intergenic 50.0%
GCTAGACTATCCTTACCCCA+CGG - chr4_2:74480781-74480800 Msa0622110:intron 50.0%
AATAGTTGGTCCGTGGGGTA+AGG + chr4_2:74480794-74480813 None:intergenic 50.0%
GTTGAGAGCTAGCTAAGAGG+AGG + chr4_2:74481051-74481070 None:intergenic 50.0%
GGAGTTGAGAGCTAGCTAAG+AGG + chr4_2:74481054-74481073 None:intergenic 50.0%
GGCGAGTCTCTTATTCCTCT+TGG + chr4_2:74481638-74481657 None:intergenic 50.0%
GACAGTCTCATAGCACATGC+TGG - chr4_2:74481838-74481857 Msa0622110:intron 50.0%
GGACTCTGTCGAGGCTATTA+AGG + chr4_2:74482068-74482087 None:intergenic 50.0%
TTCAAAAGACGACGACCAGC+AGG + chr4_2:74482279-74482298 None:intergenic 50.0%
! TGCTGGTCGTCGTCTTTTGA+AGG - chr4_2:74482278-74482297 Msa0622110:intron 50.0%
! TTGATGACCGTGCTGGTGTT+AGG - chr4_2:74482364-74482383 Msa0622110:intron 50.0%
ACCTTCAAAACCGCTACCGT+TGG - chr4_2:74482651-74482670 Msa0622110:intron 50.0%
!! ACCAACGGTAGCGGTTTTGA+AGG + chr4_2:74482655-74482674 None:intergenic 50.0%
TCAAAACCGCTACCGTTGGT+AGG - chr4_2:74482655-74482674 Msa0622110:intron 50.0%
CAGTCTACATCCGACCTTAG+TGG - chr4_2:74482913-74482932 Msa0622110:CDS 50.0%
!! GGACGACGAAAGTGCAGTTT+TGG + chr4_2:74483274-74483293 None:intergenic 50.0%
TTTCGTCGTCCGAAAGCCAT+TGG - chr4_2:74483283-74483302 Msa0622110:intron 50.0%
GCATTGTGACTGCACAAGGT+AGG - chr4_2:74483318-74483337 Msa0622110:CDS 50.0%
TGTGACTGCACAAGGTAGGA+AGG - chr4_2:74483322-74483341 Msa0622110:CDS 50.0%
CTGCCACAATTGAACCTCCT+TGG + chr4_2:74483376-74483395 None:intergenic 50.0%
! AAGCTTACTTGGCTCGTCCA+TGG - chr4_2:74483429-74483448 Msa0622110:CDS 50.0%
! TTACTTGGCTCGTCCATGGA+AGG - chr4_2:74483433-74483452 Msa0622110:CDS 50.0%
ATACCTGCTGGTGTTTGCCA+TGG + chr4_2:74483524-74483543 None:intergenic 50.0%
CAAACACCAGCAGGTATCAC+AGG - chr4_2:74483527-74483546 Msa0622110:intron 50.0%
TCAGTTCCTGTGATACCTGC+TGG + chr4_2:74483536-74483555 None:intergenic 50.0%
GAGTACAATAACCGTGGTCC+TGG - chr4_2:74483572-74483591 Msa0622110:CDS 50.0%
TAACATCGGAACCAGGACCA+CGG + chr4_2:74483586-74483605 None:intergenic 50.0%
CGCTGTTTAACATCGGAACC+AGG + chr4_2:74483593-74483612 None:intergenic 50.0%
CATGGTCGTTAGGGGAGATG+AGG - chr4_2:74478887-74478906 Msa0622110:intron 55.0%
GACAGAACTGCGCAGTACGA+AGG - chr4_2:74478925-74478944 Msa0622110:intron 55.0%
CCTCGAAGCATGGCTAAGTG+CGG - chr4_2:74478951-74478970 Msa0622110:intron 55.0%
GTTGTTGCGTTGGATGGGAG+CGG - chr4_2:74479246-74479265 Msa0622110:intron 55.0%
ATTCCGGAACACTGCTGGAC+CGG - chr4_2:74479675-74479694 Msa0622110:CDS 55.0%
TTACCGGTCCAGCAGTGTTC+CGG + chr4_2:74479681-74479700 None:intergenic 55.0%
ACCGGTAAACCATCAAGCCG+TGG - chr4_2:74479693-74479712 Msa0622110:CDS 55.0%
! GCCACGGCTTGATGGTTTAC+CGG + chr4_2:74479697-74479716 None:intergenic 55.0%
GTATGGTTCAACCTCGAGGG+TGG - chr4_2:74480067-74480086 Msa0622110:CDS 55.0%
TCTACCAGCGAGCGATGAAC+CGG + chr4_2:74480157-74480176 None:intergenic 55.0%
CGCTCGCTGGTAGAGTCAAA+TGG - chr4_2:74480163-74480182 Msa0622110:CDS 55.0%
GCTGGTAGAGTCAAATGGCC+TGG - chr4_2:74480168-74480187 Msa0622110:CDS 55.0%
GTTCAGCGGTTCCTTAACGG+CGG - chr4_2:74480234-74480253 Msa0622110:intron 55.0%
GGTTCCTTAACGGCGGTTCA+TGG - chr4_2:74480241-74480260 Msa0622110:CDS 55.0%
GCAACCATGAACCGCCGTTA+AGG + chr4_2:74480248-74480267 None:intergenic 55.0%
GTCGCCGTCACAGTTAACGT+AGG - chr4_2:74481697-74481716 Msa0622110:intron 55.0%
AACTCGTGAGGACTCTGTCG+AGG + chr4_2:74482077-74482096 None:intergenic 55.0%
ATGCCATGGCAAACACCAGC+AGG - chr4_2:74483518-74483537 Msa0622110:intron 55.0%
!! GGAGGAGTTTTAGTCGCTCC+TGG + chr4_2:74483728-74483747 None:intergenic 55.0%
TGGACTTGGAGGGCCTGTTC+TGG + chr4_2:74478710-74478729 None:intergenic 60.0%
GTACTGCGCAGTTCTGTCGC+CGG + chr4_2:74478923-74478942 None:intergenic 60.0%
CCGCACTTAGCCATGCTTCG+AGG + chr4_2:74478954-74478973 None:intergenic 60.0%
CACGCAATGCCACGGCTTGA+TGG + chr4_2:74479705-74479724 None:intergenic 60.0%
AACCTCGAGGGTGGCTTGAG+TGG - chr4_2:74480076-74480095 Msa0622110:CDS 60.0%
CTACCAGCGAGCGATGAACC+GGG + chr4_2:74480156-74480175 None:intergenic 60.0%
GCACGGTCATCAACCCACTC+AGG + chr4_2:74482357-74482376 None:intergenic 60.0%
!! GAGTGGGTTGATGACCGTGC+TGG - chr4_2:74482357-74482376 Msa0622110:intron 60.0%
AGCCACTCAAGCCACCCTCG+AGG + chr4_2:74480081-74480100 None:intergenic 65.0%
CGAGGGTGGCTTGAGTGGCT+CGG - chr4_2:74480081-74480100 Msa0622110:CDS 65.0%
CTGGGGGAGGAGACTCCAAG+AGG - chr4_2:74481620-74481639 Msa0622110:intron 65.0%
GGACCCGGTTCATCGCTCGC+TGG - chr4_2:74480150-74480169 Msa0622110:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 74478523 74483766 74478523 ID=Msa0622110;Name=Msa0622110
chr4_2 mRNA 74478523 74483766 74478523 ID=Msa0622110-mRNA-1;Parent=Msa0622110;Name=Msa0622110-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0|0|10|0|734
chr4_2 exon 74483565 74483766 74483565 ID=Msa0622110-mRNA-1:exon:22462;Parent=Msa0622110-mRNA-1
chr4_2 exon 74483285 74483510 74483285 ID=Msa0622110-mRNA-1:exon:22461;Parent=Msa0622110-mRNA-1
chr4_2 exon 74483061 74483266 74483061 ID=Msa0622110-mRNA-1:exon:22460;Parent=Msa0622110-mRNA-1
chr4_2 exon 74482803 74483048 74482803 ID=Msa0622110-mRNA-1:exon:22459;Parent=Msa0622110-mRNA-1
chr4_2 exon 74480448 74480660 74480448 ID=Msa0622110-mRNA-1:exon:22458;Parent=Msa0622110-mRNA-1
chr4_2 exon 74480240 74480438 74480240 ID=Msa0622110-mRNA-1:exon:22457;Parent=Msa0622110-mRNA-1
chr4_2 exon 74479986 74480233 74479986 ID=Msa0622110-mRNA-1:exon:22456;Parent=Msa0622110-mRNA-1
chr4_2 exon 74479755 74479958 74479755 ID=Msa0622110-mRNA-1:exon:22455;Parent=Msa0622110-mRNA-1
chr4_2 exon 74479617 74479742 74479617 ID=Msa0622110-mRNA-1:exon:22454;Parent=Msa0622110-mRNA-1
chr4_2 exon 74478523 74478857 74478523 ID=Msa0622110-mRNA-1:exon:22453;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74483565 74483766 74483565 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74483285 74483510 74483285 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74483061 74483266 74483061 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74482803 74483048 74482803 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74480448 74480660 74480448 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74480240 74480438 74480240 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74479986 74480233 74479986 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74479755 74479958 74479755 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74479617 74479742 74479617 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
chr4_2 CDS 74478523 74478857 74478523 ID=Msa0622110-mRNA-1:cds;Parent=Msa0622110-mRNA-1
Gene Sequence

>Msa0622110

ATGGCCTTGCTAGTGAATTTCCTTTTCATTCTCATCCTTTTACCATCATTTGATCAAGTTCTCTCATTCCCAGATGAAATTCCCTCAGACATCCAAACTCAAGATATGCAAGCTTTGATTGCACAAGCTTGCATGGATATTGAAAACCAAAACTCATGCCTCACAAACATTCATAACGAGCTAACCAGAACAGGCCCTCCAAGTGCCATCAACAACATGACAAAGATCAGTACATTCTCTGTTAATAACCGCGAGCAACTTGCCATAGAAGATTGCAAGGAGCTCCTTGATTTCTCTGTGTCAGAGCTTGCATGGTCGTTAGGGGAGATGAGGAGAATTCGAGCCGGCGACAGAACTGCGCAGTACGAAGGAAACCTCGAAGCATGGCTAAGTGCGGCGCTTAGCAATCAAGACACATGTATTGAAGGACGTCTTGAGAGTTACATTAGTGGAAGCTTAACACAAGTAACCCAGCTTATCAGTAATGTTCTGTCTTTGTACACTCAGCTTAATCGCTTACCCTTTAGGTCTCCAAGGAACACTACCTTGCATGAAACTAGTACTGATGAAAGTTTGGAGTTTCCTGAATGGATGACAGAGGCTGATCAAGAGCTACTTAAATCTAAGCCGCACGATGCAGTTGTTGCGTTGGATGGGAGCGGTCAGTACCGTACAATCAACGAAGCTGTTAATGCAGCTCCTAGTCATAGCAATAGGAGACATGTTATCTATGTGAAGAAGGGACTATACAAGGAGAATATTGATATGAAGAAGAAGATGACCAACATCATGATCGTTGGTGATGGTATTGGTCAAACCATTGTTACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACTTTTGGAGACTCCAAGAGGAATAAGAGACTCGCCATAATTGGTGTCTCTACCTTCTTATTAGTTGCTATGGTTGTCGCCGTCACAGTTAACGTAGGCTTTAACAACAAAAAGGAACCTGGAGAAGATCAAACTTCAAAAGAGTCACGCGTATCTCAATCGGTAAAAGCTGTCAAAACACTTTGCGCACCAACAGATTACAAAAAGGAATGTGAGGACACACATGCTGGCAATATAACTGAACCAAAAGAACTCATCAAGATCGCTTTCAACATAACCATCGCAAAAATCAGCGAAGGACTTAAAAAAACTCATCTCCTTCAAGAGGCTGAAAAAGATGAAAGAACTAAACAAGCACTTGATACGTGTAAACAAGTCATGCAGCTTTCCATTGACGAATTCCAAAGGTCACTAGAAAGTAACTTCGACCTTAATAGCCTCGACAGAGTCCTCACGAGTTTGAAAGTATGGTTAAGCGGTGCCATCACATACCAAGAAACATGTTTGGATGCTTTTGAGAATACTACAACCGATGCTGGTCATAAAATGCAAGAGGTTTTGCAAGCTTCTATGCATATGAGTAGCAATGGTCTTTCCATTATTAACCAACTTTCCAAAACATTCGAAGAGATGAAACAACCTGCTGGTCGTCGTCTTTTGAAGGAAAGTCATGGTGGTGATTTTGAGCTTCCTGAGTGGGTTGATGACCGTGCTGGTGTTAGGAAACTTCTTAATAAAATGACTGGCAGGAAACTTCAGGCTCATGTTGTTGTTGCTAAGGATGGAAGTGGAAATTTCACCACAATCACTGAGGCTCTTAAGCATGTTCCCAAGAAAAACTTGAAGCCATTTGTTATTTACATCAAGGAGGAGTATGTTGAGGTTACTAAAACCATGACTCACGTTGTTTTCATCGGTGATGGTGGTAGAAAGACACGCATTACTGGCAATAAAAACTTCATTGATGGAGTTGGTACCTTCAAAACCGCTACCGTTGCTTACTTGGCTCGTCCATGGAAGGATTTCTCAAGAACTATCTTTTTGGATACATATATTGGTGATTTGATCACACCTGAAGGTTATATGCCATGGCAAACACCAGCAGGTATCACAGGAACTGACACTTGTTACTATGCTGAGTACAATAACCGTGGTCCTGGTTCCGATGTTAAACAGCGTGTAAAATGGCAAGGTGTTAAGACTATTACTTCAGAAGGAGCAGCTAGTTTTGTGCCAATTAGGTTCTTCCATGGAGATGATTGGATTAGGGTAACTAGAGTTCCTTATTCTCCAGGAGCGACTAAAACTCCTCCTTCAAGACCAACTCATTGA
Protein sequence

>Msa0622110

MALLVNFLFILILLPSFDQVLSFPDEIPSDIQTQDMQALIAQACMDIENQNSCLTNIHNELTRTGPPSAINNMTKISTFSVNNREQLAIEDCKELLDFSVSELAWSLGEMRRIRAGDRTAQYEGNLEAWLSAALSNQDTCIEGRLESYISGSLTQVTQLISNVLSLYTQLNRLPFRSPRNTTLHETSTDESLEFPEWMTEADQELLKSKPHDAVVALDGSGQYRTINEAVNAAPSHSNRRHVIYVKKGLYKENIDMKKKMTNIMIVGDGIGQTIVTSNRNFMQGWTTFRTATFGDSKRNKRLAIIGVSTFLLVAMVVAVTVNVGFNNKKEPGEDQTSKESRVSQSVKAVKTLCAPTDYKKECEDTHAGNITEPKELIKIAFNITIAKISEGLKKTHLLQEAEKDERTKQALDTCKQVMQLSIDEFQRSLESNFDLNSLDRVLTSLKVWLSGAITYQETCLDAFENTTTDAGHKMQEVLQASMHMSSNGLSIINQLSKTFEEMKQPAGRRLLKESHGGDFELPEWVDDRAGVRKLLNKMTGRKLQAHVVVAKDGSGNFTTITEALKHVPKKNLKPFVIYIKEEYVEVTKTMTHVVFIGDGGRKTRITGNKNFIDGVGTFKTATVAYLARPWKDFSRTIFLDTYIGDLITPEGYMPWQTPAGITGTDTCYYAEYNNRGPGSDVKQRVKWQGVKTITSEGAASFVPIRFFHGDDWIRVTRVPYSPGATKTPPSRPTH*