AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1404480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1404480 MtrunA17_Chr1g0209261 99.029 206 2 0 1 206 1 206 3.86e-152 420
Msa1404480 MtrunA17_Chr8g0376101 46.939 196 100 1 13 204 26 221 5.95e-64 197
Msa1404480 MtrunA17_Chr8g0387631 39.303 201 116 2 10 204 58 258 9.75e-50 162
Msa1404480 MtrunA17_Chr1g0202401 40.415 193 109 2 10 196 51 243 1.88e-44 148
Msa1404480 MtrunA17_Chr8g0348131 38.235 204 116 3 10 203 62 265 3.05e-44 148
Msa1404480 MtrunA17_Chr3g0095441 35.484 186 114 2 10 189 43 228 2.42e-36 127
Msa1404480 MtrunA17_Chr5g0442361 35.678 199 116 4 10 198 42 238 8.23e-36 125
Msa1404480 MtrunA17_Chr3g0108661 34.132 167 106 1 14 176 53 219 7.59e-27 102
Msa1404480 MtrunA17_Chr4g0005701 29.592 196 134 1 13 204 12 207 1.01e-21 88.6
Msa1404480 MtrunA17_Chr1g0208091 28.718 195 135 1 14 204 8 202 1.87e-19 82.4
Msa1404480 MtrunA17_Chr6g0453331 28.649 185 128 1 24 204 13 197 1.60e-18 79.7
Msa1404480 MtrunA17_Chr5g0402811 20.942 191 147 1 20 206 29 219 8.03e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1404480 AT3G18260.1 45.178 197 104 1 13 205 28 224 1.11e-59 187
Msa1404480 AT1G68230.2 45.833 192 102 1 15 204 22 213 2.64e-57 180
Msa1404480 AT4G11220.1 39.303 201 116 2 10 204 69 269 4.56e-52 169
Msa1404480 AT4G23630.1 38.806 201 117 2 10 204 73 273 1.62e-51 167
Msa1404480 AT4G23630.2 38.806 201 117 2 10 204 73 273 1.62e-51 167
Msa1404480 AT2G46170.1 38.500 200 117 2 10 203 52 251 1.93e-47 156
Msa1404480 AT5G41600.1 38.537 205 116 3 10 204 52 256 5.48e-46 152
Msa1404480 AT3G61560.1 36.500 200 121 2 10 203 52 251 3.75e-42 143
Msa1404480 AT3G61560.2 36.500 200 121 2 10 203 52 251 3.75e-42 143
Msa1404480 AT1G64090.1 35.678 199 118 3 10 198 48 246 5.64e-42 142
Msa1404480 AT1G64090.2 32.870 216 119 4 10 199 48 263 5.28e-38 132
Msa1404480 AT3G10260.1 32.143 196 129 1 13 204 50 245 2.25e-35 125
Msa1404480 AT3G10260.2 32.143 196 129 1 13 204 50 245 2.25e-35 125
Msa1404480 AT1G68230.1 46.715 137 71 1 15 149 22 158 2.47e-35 122
Msa1404480 AT3G10260.3 32.143 196 129 1 13 204 70 265 4.49e-35 125
Msa1404480 AT4G01230.2 35.784 204 120 4 2 197 44 244 5.71e-35 124
Msa1404480 AT4G01230.1 34.804 204 120 5 2 197 44 242 6.80e-32 116
Msa1404480 AT3G61560.3 37.671 146 85 2 10 149 52 197 4.37e-28 105
Msa1404480 AT2G46170.2 37.795 127 73 2 10 130 52 178 4.10e-24 94.7
Msa1404480 AT3G10915.2 25.854 205 146 2 5 203 20 224 2.33e-23 93.6
Msa1404480 AT3G10915.7 26.000 200 142 2 10 203 50 249 3.04e-23 94.0
Msa1404480 AT3G19460.1 28.141 199 123 5 16 206 14 200 5.14e-23 92.0
Msa1404480 AT3G19460.5 28.141 199 123 5 16 206 14 200 5.14e-23 92.0
Msa1404480 AT3G19460.4 28.141 199 123 5 16 206 14 200 5.14e-23 92.0
Msa1404480 AT3G10915.4 25.728 206 146 3 5 203 20 225 8.23e-22 89.4
Msa1404480 AT2G15280.1 24.742 194 142 1 15 204 5 198 2.41e-20 85.1
Msa1404480 AT3G10915.3 24.044 183 135 1 25 203 9 191 3.37e-18 79.3
Msa1404480 AT3G10915.6 24.044 183 135 1 25 203 10 192 3.86e-18 79.0
Msa1404480 AT3G19460.3 25.431 232 121 6 16 206 14 234 2.08e-17 77.8
Msa1404480 AT3G19460.7 25.431 232 121 6 16 206 14 234 2.08e-17 77.8
Msa1404480 AT3G10915.5 23.246 228 146 4 5 203 20 247 7.17e-17 76.6
Msa1404480 AT3G54120.1 29.545 176 115 3 3 172 1 173 9.60e-17 75.5
Msa1404480 AT2G01240.1 28.889 135 94 2 69 202 1 134 3.06e-14 67.4
Msa1404480 AT3G19460.2 24.554 224 117 6 24 206 6 218 1.09e-13 67.8
Msa1404480 AT3G19460.6 24.554 224 117 6 24 206 6 218 1.09e-13 67.8

Find 64 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATGCTCATTCTCTTTATT+TGG 0.147832 tig0023067:+30955 Msa1404480:CDS
TCCAATCAACCTGGTTTATT+TGG 0.194638 tig0023067:+29927 Msa1404480:CDS
GGTACATCACATATATTTAT+TGG 0.212629 tig0023067:+29790 Msa1404480:five_prime_UTR
TGTTGATTTGATTAATTTCT+TGG 0.229748 tig0023067:+29751 Msa1404480:five_prime_UTR
GAAGAGATTGTTCAACAAAT+TGG 0.245195 tig0023067:+31817 Msa1404480:CDS
TCATACCGCTCATACATAAT+TGG 0.314636 tig0023067:-31752 None:intergenic
CTATGGATCATGTCTACTAT+TGG 0.332384 tig0023067:+31585 Msa1404480:CDS
ACCAAATAAACCAGGTTGAT+TGG 0.341184 tig0023067:-29928 None:intergenic
ATGAATCTAACGGTAGAATC+TGG 0.349110 tig0023067:-31143 None:intergenic
TTCAGACAATAGCTGGTCTA+TGG 0.360102 tig0023067:+31568 Msa1404480:intron
ATTATTCATTTACATGCTTA+AGG 0.367372 tig0023067:-32005 None:intergenic
TGGATTCTACAGTTCTCAAT+AGG 0.367654 tig0023067:+31837 Msa1404480:CDS
ATCTGCTTGAAGCCAAATAA+TGG 0.371076 tig0023067:-31972 None:intergenic
GGAACGGATTGGCATGACTA+TGG 0.391617 tig0023067:-29907 None:intergenic
TAGGAATCATTAACTTGGTT+TGG 0.393341 tig0023067:+29841 Msa1404480:five_prime_UTR
ATTTCAAAATCATAGATATC+AGG 0.404128 tig0023067:-31119 None:intergenic
TTTATTTGGTATAATGCAGC+TGG 0.406398 tig0023067:+30969 Msa1404480:CDS
GCATGAAACATAACAGTGTT+AGG 0.414970 tig0023067:+29822 Msa1404480:five_prime_UTR
TGAACAATCTCTTCACGTCT+TGG 0.421418 tig0023067:-31808 None:intergenic
AAATAAAGAGAATGAGCATA+AGG 0.427457 tig0023067:-30953 None:intergenic
ATTGAATTTCAGACAATAGC+TGG 0.451267 tig0023067:+31561 Msa1404480:intron
CTTGGTTTCAAAGTCTCCAT+TGG 0.486090 tig0023067:+29769 Msa1404480:five_prime_UTR
AATAAAGAGAATGAGCATAA+GGG 0.486688 tig0023067:-30952 None:intergenic
AGACCACTTCACGCAGTCCT+TGG 0.495322 tig0023067:+29951 Msa1404480:CDS
CCAGGTTGATTGGAACGGAT+TGG 0.508121 tig0023067:-29918 None:intergenic
CCACTTCACGCAGTCCTTGG+TGG 0.509588 tig0023067:+29954 Msa1404480:CDS
GAAAACAACGGCAGCAATTG+TGG 0.515778 tig0023067:+30851 Msa1404480:CDS
ATGCAGCTGGATTAATCACT+TGG 0.517496 tig0023067:+30982 Msa1404480:CDS
AAAAGTTCAACTTGTTCTTG+AGG 0.520276 tig0023067:+31171 Msa1404480:CDS
CAGTTCTCAATAGGATTCCA+AGG 0.520634 tig0023067:+31846 Msa1404480:CDS
TGAATCTAACGGTAGAATCT+GGG 0.523175 tig0023067:-31142 None:intergenic
AGATCTTAGATTCTTCTTTG+TGG 0.523221 tig0023067:+31220 Msa1404480:CDS
ACAACGGCAGCAATTGTGGC+TGG 0.528525 tig0023067:+30855 Msa1404480:CDS
TTGTATCGAGAGGTAAGGTA+TGG 0.539319 tig0023067:-29724 None:intergenic
CCAATCCGTTCCAATCAACC+TGG 0.539807 tig0023067:+29918 Msa1404480:CDS
TTCATTTACATGCTTAAGGT+AGG 0.543763 tig0023067:-32001 None:intergenic
ACATAATTGGAAGTGTCACC+AGG 0.546032 tig0023067:-31739 None:intergenic
GTGGACTATCTAGCAAGTAA+AGG 0.551485 tig0023067:+31782 Msa1404480:CDS
CAATGTATCTTAATCATGTG+TGG 0.554111 tig0023067:+29662 None:intergenic
CTTAATCATGTGTGGGCACG+AGG 0.559547 tig0023067:+29670 Msa1404480:five_prime_UTR
AGTGTTAGGAATCATTAACT+TGG 0.560560 tig0023067:+29836 Msa1404480:five_prime_UTR
AAATATATGTGATGTACCAA+TGG 0.562809 tig0023067:-29785 None:intergenic
CACACATGATTAAGATACAT+TGG 0.564018 tig0023067:-29661 None:intergenic
GAATGAGCATAAGGGCTATG+AGG 0.566119 tig0023067:-30944 None:intergenic
GCATAAGGGCTATGAGGATG+TGG 0.569062 tig0023067:-30938 None:intergenic
CCACCAAGGACTGCGTGAAG+TGG 0.572676 tig0023067:-29954 None:intergenic
ATAAACCAGGTTGATTGGAA+CGG 0.576581 tig0023067:-29923 None:intergenic
CAGTTGCTGATATCTTGCTA+TGG 0.577932 tig0023067:+30820 Msa1404480:intron
GTTATGTTTCATGCGCATTG+AGG 0.578219 tig0023067:-29813 None:intergenic
AATGTATCTTAATCATGTGT+GGG 0.578843 tig0023067:+29663 None:intergenic
CGGAGAAGATATAAAATCAT+CGG 0.580814 tig0023067:-31892 None:intergenic
GGTTTGGTTTCTCTTTGAAG+TGG 0.581573 tig0023067:+30887 Msa1404480:CDS
AACATTTGTATCGAGAGGTA+AGG 0.594348 tig0023067:-29729 None:intergenic
AGTTCTCAATAGGATTCCAA+GGG 0.601630 tig0023067:+31847 Msa1404480:CDS
GGTAAGGTATGGCTTTAGCA+TGG 0.612064 tig0023067:-29713 None:intergenic
CACTTCCAATTATGTATGAG+CGG 0.613668 tig0023067:+31747 Msa1404480:CDS
CTTCACGCAGTCCTTGGTGG+AGG 0.617691 tig0023067:+29957 Msa1404480:CDS
TCAACAACATTTGTATCGAG+AGG 0.636340 tig0023067:-29734 None:intergenic
GTATGAGCGGTATGAACATG+AGG 0.680175 tig0023067:+31760 Msa1404480:CDS
TCTTACTCTTTCCTCCACCA+AGG 0.691240 tig0023067:-29968 None:intergenic
AGTGGTCTACCAAATAAACC+AGG 0.692119 tig0023067:-29936 None:intergenic
ATGGAAAGACATGAAAACAA+CGG 0.698215 tig0023067:+30839 Msa1404480:CDS
TGAGCGGTATGAACATGAGG+TGG 0.701805 tig0023067:+31763 Msa1404480:CDS
GTTCTCAATAGGATTCCAAG+GGG 0.759037 tig0023067:+31848 Msa1404480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATAGTAAATATTTAAT+AGG + tig0023067:30056-30075 Msa1404480:intron 10.0%
!! ATATTTAGAAATTAGATTAA+GGG - tig0023067:30118-30137 None:intergenic 10.0%
!! TATATTTAGAAATTAGATTA+AGG - tig0023067:30119-30138 None:intergenic 10.0%
!!! AATAACTTTTAAAAATAAGA+GGG - tig0023067:30344-30363 None:intergenic 10.0%
!!! TAATAACTTTTAAAAATAAG+AGG - tig0023067:30345-30364 None:intergenic 10.0%
!! TACTAAAAATGAAAATTAAT+AGG - tig0023067:30394-30413 None:intergenic 10.0%
!!! ACATATTCATAATTTTTATA+AGG - tig0023067:31023-31042 None:intergenic 10.0%
!! TATAGTCAAAAAAATTTATA+GGG - tig0023067:31366-31385 None:intergenic 10.0%
!! ATATAGTCAAAAAAATTTAT+AGG - tig0023067:31367-31386 None:intergenic 10.0%
!! AAAAATTGATAAAAACTTAT+AGG + tig0023067:31451-31470 Msa1404480:intron 10.0%
!!! TTTGATAGTAAATATTTAAT+AGG + tig0023067:30056-30075 Msa1404480:intron 10.0%
!! ATATTTAGAAATTAGATTAA+GGG - tig0023067:30118-30137 None:intergenic 10.0%
!! TATATTTAGAAATTAGATTA+AGG - tig0023067:30119-30138 None:intergenic 10.0%
!!! AATAACTTTTAAAAATAAGA+GGG - tig0023067:30344-30363 None:intergenic 10.0%
!!! TAATAACTTTTAAAAATAAG+AGG - tig0023067:30345-30364 None:intergenic 10.0%
!! TACTAAAAATGAAAATTAAT+AGG - tig0023067:30394-30413 None:intergenic 10.0%
!!! ACATATTCATAATTTTTATA+AGG - tig0023067:31023-31042 None:intergenic 10.0%
!! TATAGTCAAAAAAATTTATA+GGG - tig0023067:31366-31385 None:intergenic 10.0%
!! ATATAGTCAAAAAAATTTAT+AGG - tig0023067:31367-31386 None:intergenic 10.0%
!! AAAAATTGATAAAAACTTAT+AGG + tig0023067:31451-31470 Msa1404480:intron 10.0%
!! ATAGTAAATATTTAATAGGT+TGG + tig0023067:30060-30079 Msa1404480:intron 15.0%
!!! TTTTATCAAAAAAATGTAAG+CGG + tig0023067:30140-30159 Msa1404480:intron 15.0%
!!! AAAAAATAATTTTTTGTCGA+GGG - tig0023067:30251-30270 None:intergenic 15.0%
!!! TAAAAAATAATTTTTTGTCG+AGG - tig0023067:30252-30271 None:intergenic 15.0%
!!! ATAACTTTTAAAAATAAGAG+GGG - tig0023067:30343-30362 None:intergenic 15.0%
!!! TTTTAAAACGTTTATTTCAT+TGG + tig0023067:30492-30511 Msa1404480:intron 15.0%
!!! GTTCATACAAAATTTTATTT+TGG + tig0023067:30663-30682 Msa1404480:intron 15.0%
!!! TATATTTTATTTAGTACATG+TGG - tig0023067:30770-30789 None:intergenic 15.0%
!! AAATAAGATAGCATAAATTA+TGG + tig0023067:31479-31498 Msa1404480:intron 15.0%
!! AATAAGATAGCATAAATTAT+GGG + tig0023067:31480-31499 Msa1404480:intron 15.0%
!! ATAGTAAATATTTAATAGGT+TGG + tig0023067:30060-30079 Msa1404480:intron 15.0%
!!! TTTTATCAAAAAAATGTAAG+CGG + tig0023067:30140-30159 Msa1404480:intron 15.0%
!!! AAAAAATAATTTTTTGTCGA+GGG - tig0023067:30251-30270 None:intergenic 15.0%
!!! TAAAAAATAATTTTTTGTCG+AGG - tig0023067:30252-30271 None:intergenic 15.0%
!!! ATAACTTTTAAAAATAAGAG+GGG - tig0023067:30343-30362 None:intergenic 15.0%
!!! TTTTAAAACGTTTATTTCAT+TGG + tig0023067:30492-30511 Msa1404480:intron 15.0%
!!! GTTCATACAAAATTTTATTT+TGG + tig0023067:30663-30682 Msa1404480:intron 15.0%
!!! TATATTTTATTTAGTACATG+TGG - tig0023067:30770-30789 None:intergenic 15.0%
!! AAATAAGATAGCATAAATTA+TGG + tig0023067:31479-31498 Msa1404480:intron 15.0%
!! AATAAGATAGCATAAATTAT+GGG + tig0023067:31480-31499 Msa1404480:intron 15.0%
!!! TGTTGATTTGATTAATTTCT+TGG + tig0023067:29751-29770 Msa1404480:five_prime_UTR 20.0%
!! TTTATCAAAAAAATGTAAGC+GGG + tig0023067:30141-30160 Msa1404480:intron 20.0%
!!! ATTTTACTTTTATATATGGG+TGG + tig0023067:30173-30192 Msa1404480:intron 20.0%
!! CTAAAACAAGATTAAATGTA+TGG - tig0023067:30320-30339 None:intergenic 20.0%
!!! TACAAAATTTTATTTTGGCT+TGG + tig0023067:30668-30687 Msa1404480:intron 20.0%
!! ATTTCAAAATCATAGATATC+AGG - tig0023067:31122-31141 None:intergenic 20.0%
!!! CTTTTTATGAATGAATCTAA+CGG - tig0023067:31156-31175 None:intergenic 20.0%
!!! AAATTTTATGACATTTCAAC+TGG + tig0023067:31194-31213 Msa1404480:CDS 20.0%
!!! AATTTTATGACATTTCAACT+GGG + tig0023067:31195-31214 Msa1404480:CDS 20.0%
!! AATTCAGAAAGAAAAGAAAA+TGG - tig0023067:31293-31312 None:intergenic 20.0%
!!! GCATCTTTTATAAAAATAGA+GGG + tig0023067:31394-31413 Msa1404480:intron 20.0%
!! ATAAGATAGCATAAATTATG+GGG + tig0023067:31481-31500 Msa1404480:intron 20.0%
!! AACAAATCAATTCAAATCAA+AGG - tig0023067:31525-31544 None:intergenic 20.0%
!! ATTATTCATTTACATGCTTA+AGG - tig0023067:32008-32027 None:intergenic 20.0%
!!! TGTTGATTTGATTAATTTCT+TGG + tig0023067:29751-29770 Msa1404480:five_prime_UTR 20.0%
!! TTTATCAAAAAAATGTAAGC+GGG + tig0023067:30141-30160 Msa1404480:intron 20.0%
!!! ATTTTACTTTTATATATGGG+TGG + tig0023067:30173-30192 Msa1404480:intron 20.0%
!! CTAAAACAAGATTAAATGTA+TGG - tig0023067:30320-30339 None:intergenic 20.0%
!!! TACAAAATTTTATTTTGGCT+TGG + tig0023067:30668-30687 Msa1404480:intron 20.0%
!! ATTTCAAAATCATAGATATC+AGG - tig0023067:31122-31141 None:intergenic 20.0%
!!! CTTTTTATGAATGAATCTAA+CGG - tig0023067:31156-31175 None:intergenic 20.0%
!!! AAATTTTATGACATTTCAAC+TGG + tig0023067:31194-31213 Msa1404480:CDS 20.0%
!!! AATTTTATGACATTTCAACT+GGG + tig0023067:31195-31214 Msa1404480:CDS 20.0%
!! AATTCAGAAAGAAAAGAAAA+TGG - tig0023067:31293-31312 None:intergenic 20.0%
!!! GCATCTTTTATAAAAATAGA+GGG + tig0023067:31394-31413 Msa1404480:intron 20.0%
!! ATAAGATAGCATAAATTATG+GGG + tig0023067:31481-31500 Msa1404480:intron 20.0%
!! AACAAATCAATTCAAATCAA+AGG - tig0023067:31525-31544 None:intergenic 20.0%
!! ATTATTCATTTACATGCTTA+AGG - tig0023067:32008-32027 None:intergenic 20.0%
! AAATATATGTGATGTACCAA+TGG - tig0023067:29788-29807 None:intergenic 25.0%
! GGTACATCACATATATTTAT+TGG + tig0023067:29790-29809 Msa1404480:five_prime_UTR 25.0%
!! GTAAATATTTAATAGGTTGG+TGG + tig0023067:30063-30082 Msa1404480:intron 25.0%
! TTTAGAAATTAGATTAAGGG+AGG - tig0023067:30115-30134 None:intergenic 25.0%
!!! ATTTTCATTTTTAGTAGTCG+TGG + tig0023067:30398-30417 Msa1404480:intron 25.0%
! TCATTGGTAGAAATAGAAAT+AGG + tig0023067:30508-30527 Msa1404480:intron 25.0%
! AATAAAGAGAATGAGCATAA+GGG - tig0023067:30955-30974 None:intergenic 25.0%
! AAATAAAGAGAATGAGCATA+AGG - tig0023067:30956-30975 None:intergenic 25.0%
! TTATGCTCATTCTCTTTATT+TGG + tig0023067:30955-30974 Msa1404480:CDS 25.0%
! AAAAATAAGGCTTCTGAATA+GGG - tig0023067:31051-31070 None:intergenic 25.0%
!!! AGCCTTATTTTTGTAACATT+TGG + tig0023067:31059-31078 Msa1404480:intron 25.0%
! CACCAAATGTTACAAAAATA+AGG - tig0023067:31064-31083 None:intergenic 25.0%
! GAGGTGATAATAATTGAAAA+TGG - tig0023067:31260-31279 None:intergenic 25.0%
! AGTCAAAAAAATTTATAGGG+AGG - tig0023067:31363-31382 None:intergenic 25.0%
!! CGCATCTTTTATAAAAATAG+AGG + tig0023067:31393-31412 Msa1404480:intron 25.0%
! AAATGTACCTGTGTTTAAAA+AGG + tig0023067:31420-31439 Msa1404480:intron 25.0%
! AAATATATGTGATGTACCAA+TGG - tig0023067:29788-29807 None:intergenic 25.0%
! GGTACATCACATATATTTAT+TGG + tig0023067:29790-29809 Msa1404480:five_prime_UTR 25.0%
!! GTAAATATTTAATAGGTTGG+TGG + tig0023067:30063-30082 Msa1404480:intron 25.0%
! TTTAGAAATTAGATTAAGGG+AGG - tig0023067:30115-30134 None:intergenic 25.0%
!!! ATTTTCATTTTTAGTAGTCG+TGG + tig0023067:30398-30417 Msa1404480:intron 25.0%
! TCATTGGTAGAAATAGAAAT+AGG + tig0023067:30508-30527 Msa1404480:intron 25.0%
! AATAAAGAGAATGAGCATAA+GGG - tig0023067:30955-30974 None:intergenic 25.0%
! AAATAAAGAGAATGAGCATA+AGG - tig0023067:30956-30975 None:intergenic 25.0%
! TTATGCTCATTCTCTTTATT+TGG + tig0023067:30955-30974 Msa1404480:CDS 25.0%
! AAAAATAAGGCTTCTGAATA+GGG - tig0023067:31051-31070 None:intergenic 25.0%
!!! AGCCTTATTTTTGTAACATT+TGG + tig0023067:31059-31078 Msa1404480:intron 25.0%
! CACCAAATGTTACAAAAATA+AGG - tig0023067:31064-31083 None:intergenic 25.0%
! GAGGTGATAATAATTGAAAA+TGG - tig0023067:31260-31279 None:intergenic 25.0%
! AGTCAAAAAAATTTATAGGG+AGG - tig0023067:31363-31382 None:intergenic 25.0%
!! CGCATCTTTTATAAAAATAG+AGG + tig0023067:31393-31412 Msa1404480:intron 25.0%
! AAATGTACCTGTGTTTAAAA+AGG + tig0023067:31420-31439 Msa1404480:intron 25.0%
AGTGTTAGGAATCATTAACT+TGG + tig0023067:29836-29855 Msa1404480:five_prime_UTR 30.0%
! TAGGAATCATTAACTTGGTT+TGG + tig0023067:29841-29860 Msa1404480:five_prime_UTR 30.0%
! TACTTTTATATATGGGTGGT+TGG + tig0023067:30177-30196 Msa1404480:intron 30.0%
CTTCTTAAATAAAGACGAGA+CGG + tig0023067:30534-30553 Msa1404480:intron 30.0%
ATTAAGAAGAGTTCACTCTA+AGG - tig0023067:30601-30620 None:intergenic 30.0%
ATGAACTAACCCACATAAAT+TGG - tig0023067:30649-30668 None:intergenic 30.0%
!!! GTGGCTTTTTTTCTAAAACT+TGG - tig0023067:30751-30770 None:intergenic 30.0%
TCAGAACAATCATATCACTA+AGG - tig0023067:30795-30814 None:intergenic 30.0%
ATGGAAAGACATGAAAACAA+CGG + tig0023067:30839-30858 Msa1404480:CDS 30.0%
TTTATTTGGTATAATGCAGC+TGG + tig0023067:30969-30988 Msa1404480:CDS 30.0%
CAAAAATAAGGCTTCTGAAT+AGG - tig0023067:31052-31071 None:intergenic 30.0%
TTATTTATGTGTTGCATTGC+AGG + tig0023067:31090-31109 Msa1404480:intron 30.0%
! AAAAGTTCAACTTGTTCTTG+AGG + tig0023067:31171-31190 Msa1404480:CDS 30.0%
AGATCTTAGATTCTTCTTTG+TGG + tig0023067:31220-31239 Msa1404480:CDS 30.0%
ATTGAATTTCAGACAATAGC+TGG + tig0023067:31561-31580 Msa1404480:intron 30.0%
GAAGAGATTGTTCAACAAAT+TGG + tig0023067:31817-31836 Msa1404480:CDS 30.0%
CGGAGAAGATATAAAATCAT+CGG - tig0023067:31895-31914 None:intergenic 30.0%
!!! ATGTTTTATTTCATGCGTGA+CGG - tig0023067:31915-31934 None:intergenic 30.0%
TTCATTTACATGCTTAAGGT+AGG - tig0023067:32004-32023 None:intergenic 30.0%
AGTGTTAGGAATCATTAACT+TGG + tig0023067:29836-29855 Msa1404480:five_prime_UTR 30.0%
! TAGGAATCATTAACTTGGTT+TGG + tig0023067:29841-29860 Msa1404480:five_prime_UTR 30.0%
! TACTTTTATATATGGGTGGT+TGG + tig0023067:30177-30196 Msa1404480:intron 30.0%
CTTCTTAAATAAAGACGAGA+CGG + tig0023067:30534-30553 Msa1404480:intron 30.0%
ATTAAGAAGAGTTCACTCTA+AGG - tig0023067:30601-30620 None:intergenic 30.0%
ATGAACTAACCCACATAAAT+TGG - tig0023067:30649-30668 None:intergenic 30.0%
!!! GTGGCTTTTTTTCTAAAACT+TGG - tig0023067:30751-30770 None:intergenic 30.0%
TCAGAACAATCATATCACTA+AGG - tig0023067:30795-30814 None:intergenic 30.0%
ATGGAAAGACATGAAAACAA+CGG + tig0023067:30839-30858 Msa1404480:CDS 30.0%
TTTATTTGGTATAATGCAGC+TGG + tig0023067:30969-30988 Msa1404480:CDS 30.0%
CAAAAATAAGGCTTCTGAAT+AGG - tig0023067:31052-31071 None:intergenic 30.0%
TTATTTATGTGTTGCATTGC+AGG + tig0023067:31090-31109 Msa1404480:intron 30.0%
! AAAAGTTCAACTTGTTCTTG+AGG + tig0023067:31171-31190 Msa1404480:CDS 30.0%
AGATCTTAGATTCTTCTTTG+TGG + tig0023067:31220-31239 Msa1404480:CDS 30.0%
ATTGAATTTCAGACAATAGC+TGG + tig0023067:31561-31580 Msa1404480:intron 30.0%
GAAGAGATTGTTCAACAAAT+TGG + tig0023067:31817-31836 Msa1404480:CDS 30.0%
CGGAGAAGATATAAAATCAT+CGG - tig0023067:31895-31914 None:intergenic 30.0%
!!! ATGTTTTATTTCATGCGTGA+CGG - tig0023067:31915-31934 None:intergenic 30.0%
TTCATTTACATGCTTAAGGT+AGG - tig0023067:32004-32023 None:intergenic 30.0%
AACATTTGTATCGAGAGGTA+AGG - tig0023067:29732-29751 None:intergenic 35.0%
TCAACAACATTTGTATCGAG+AGG - tig0023067:29737-29756 None:intergenic 35.0%
GCATGAAACATAACAGTGTT+AGG + tig0023067:29822-29841 Msa1404480:five_prime_UTR 35.0%
!! ATAAACCAGGTTGATTGGAA+CGG - tig0023067:29926-29945 None:intergenic 35.0%
TCCAATCAACCTGGTTTATT+TGG + tig0023067:29927-29946 Msa1404480:CDS 35.0%
!! ACCAAATAAACCAGGTTGAT+TGG - tig0023067:29931-29950 None:intergenic 35.0%
GCATGAAAACGTGATACAAA+AGG - tig0023067:30011-30030 None:intergenic 35.0%
AGGCAAATATCTTTCCACTA+GGG - tig0023067:30374-30393 None:intergenic 35.0%
TAGGCAAATATCTTTCCACT+AGG - tig0023067:30375-30394 None:intergenic 35.0%
GTCTCAAGTTTGAATTCTCT+TGG + tig0023067:30621-30640 Msa1404480:intron 35.0%
TCTCTTGGTACCAATTTATG+TGG + tig0023067:30636-30655 Msa1404480:intron 35.0%
CTCTTGGTACCAATTTATGT+GGG + tig0023067:30637-30656 Msa1404480:intron 35.0%
! AATTGTGGCTGGATTTTCAA+TGG + tig0023067:30866-30885 Msa1404480:CDS 35.0%
TGAATCTAACGGTAGAATCT+GGG - tig0023067:31145-31164 None:intergenic 35.0%
ATGAATCTAACGGTAGAATC+TGG - tig0023067:31146-31165 None:intergenic 35.0%
AGAAAAGAAAATGGTCTCAG+TGG - tig0023067:31284-31303 None:intergenic 35.0%
GTACCTGTGTTTAAAAAGGT+AGG + tig0023067:31424-31443 Msa1404480:intron 35.0%
! GTTCCTACCTTTTTAAACAC+AGG - tig0023067:31430-31449 None:intergenic 35.0%
CTATGGATCATGTCTACTAT+TGG + tig0023067:31585-31604 Msa1404480:CDS 35.0%
CAAGAATACACAACATAGCA+TGG - tig0023067:31704-31723 None:intergenic 35.0%
CACTTCCAATTATGTATGAG+CGG + tig0023067:31747-31766 Msa1404480:CDS 35.0%
TCATACCGCTCATACATAAT+TGG - tig0023067:31755-31774 None:intergenic 35.0%
TGGATTCTACAGTTCTCAAT+AGG + tig0023067:31837-31856 Msa1404480:CDS 35.0%
AGTTCTCAATAGGATTCCAA+GGG + tig0023067:31847-31866 Msa1404480:CDS 35.0%
!! CATCTGCTTTTGCCATTATT+TGG + tig0023067:31960-31979 Msa1404480:three_prime_UTR 35.0%
ATCTGCTTGAAGCCAAATAA+TGG - tig0023067:31975-31994 None:intergenic 35.0%
AACATTTGTATCGAGAGGTA+AGG - tig0023067:29732-29751 None:intergenic 35.0%
TCAACAACATTTGTATCGAG+AGG - tig0023067:29737-29756 None:intergenic 35.0%
GCATGAAACATAACAGTGTT+AGG + tig0023067:29822-29841 Msa1404480:five_prime_UTR 35.0%
!! ATAAACCAGGTTGATTGGAA+CGG - tig0023067:29926-29945 None:intergenic 35.0%
TCCAATCAACCTGGTTTATT+TGG + tig0023067:29927-29946 Msa1404480:CDS 35.0%
!! ACCAAATAAACCAGGTTGAT+TGG - tig0023067:29931-29950 None:intergenic 35.0%
GCATGAAAACGTGATACAAA+AGG - tig0023067:30011-30030 None:intergenic 35.0%
AGGCAAATATCTTTCCACTA+GGG - tig0023067:30374-30393 None:intergenic 35.0%
TAGGCAAATATCTTTCCACT+AGG - tig0023067:30375-30394 None:intergenic 35.0%
GTCTCAAGTTTGAATTCTCT+TGG + tig0023067:30621-30640 Msa1404480:intron 35.0%
TCTCTTGGTACCAATTTATG+TGG + tig0023067:30636-30655 Msa1404480:intron 35.0%
CTCTTGGTACCAATTTATGT+GGG + tig0023067:30637-30656 Msa1404480:intron 35.0%
! AATTGTGGCTGGATTTTCAA+TGG + tig0023067:30866-30885 Msa1404480:CDS 35.0%
TGAATCTAACGGTAGAATCT+GGG - tig0023067:31145-31164 None:intergenic 35.0%
ATGAATCTAACGGTAGAATC+TGG - tig0023067:31146-31165 None:intergenic 35.0%
AGAAAAGAAAATGGTCTCAG+TGG - tig0023067:31284-31303 None:intergenic 35.0%
GTACCTGTGTTTAAAAAGGT+AGG + tig0023067:31424-31443 Msa1404480:intron 35.0%
! GTTCCTACCTTTTTAAACAC+AGG - tig0023067:31430-31449 None:intergenic 35.0%
CTATGGATCATGTCTACTAT+TGG + tig0023067:31585-31604 Msa1404480:CDS 35.0%
CAAGAATACACAACATAGCA+TGG - tig0023067:31704-31723 None:intergenic 35.0%
CACTTCCAATTATGTATGAG+CGG + tig0023067:31747-31766 Msa1404480:CDS 35.0%
TCATACCGCTCATACATAAT+TGG - tig0023067:31755-31774 None:intergenic 35.0%
TGGATTCTACAGTTCTCAAT+AGG + tig0023067:31837-31856 Msa1404480:CDS 35.0%
AGTTCTCAATAGGATTCCAA+GGG + tig0023067:31847-31866 Msa1404480:CDS 35.0%
!! CATCTGCTTTTGCCATTATT+TGG + tig0023067:31960-31979 Msa1404480:three_prime_UTR 35.0%
ATCTGCTTGAAGCCAAATAA+TGG - tig0023067:31975-31994 None:intergenic 35.0%
TTGTATCGAGAGGTAAGGTA+TGG - tig0023067:29727-29746 None:intergenic 40.0%
CTTGGTTTCAAAGTCTCCAT+TGG + tig0023067:29769-29788 Msa1404480:five_prime_UTR 40.0%
GTTATGTTTCATGCGCATTG+AGG - tig0023067:29816-29835 None:intergenic 40.0%
AGTGGTCTACCAAATAAACC+AGG - tig0023067:29939-29958 None:intergenic 40.0%
! AGGGAGGTACATATTGTATC+AGG - tig0023067:30099-30118 None:intergenic 40.0%
!! ATTTAAAGCGAGGGTTTTGG+TGG - tig0023067:30228-30247 None:intergenic 40.0%
AAATATCTTTCCACTAGGGC+TGG - tig0023067:30370-30389 None:intergenic 40.0%
CATCATTGTATCAACCCATG+TGG - tig0023067:30564-30583 None:intergenic 40.0%
! TACCTCGGTTTAGTCAGTTT+TGG + tig0023067:30716-30735 Msa1404480:intron 40.0%
!!! GGTTTAGTCAGTTTTGGAGT+CGG + tig0023067:30722-30741 Msa1404480:intron 40.0%
CAGTTGCTGATATCTTGCTA+TGG + tig0023067:30820-30839 Msa1404480:intron 40.0%
! TGGCTGGATTTTCAATGGTT+TGG + tig0023067:30871-30890 Msa1404480:CDS 40.0%
! GGTTTGGTTTCTCTTTGAAG+TGG + tig0023067:30887-30906 Msa1404480:CDS 40.0%
ATGCAGCTGGATTAATCACT+TGG + tig0023067:30982-31001 Msa1404480:CDS 40.0%
! TTCAGACAATAGCTGGTCTA+TGG + tig0023067:31568-31587 Msa1404480:intron 40.0%
! TTGTACAGCATTTTTGTGCC+TGG + tig0023067:31721-31740 Msa1404480:intron 40.0%
!! ACATAATTGGAAGTGTCACC+AGG - tig0023067:31742-31761 None:intergenic 40.0%
! GTGGACTATCTAGCAAGTAA+AGG + tig0023067:31782-31801 Msa1404480:CDS 40.0%
TGAACAATCTCTTCACGTCT+TGG - tig0023067:31811-31830 None:intergenic 40.0%
CAGTTCTCAATAGGATTCCA+AGG + tig0023067:31846-31865 Msa1404480:CDS 40.0%
GTTCTCAATAGGATTCCAAG+GGG + tig0023067:31848-31867 Msa1404480:CDS 40.0%
! CGGTACTTCTTTTCTTTCAC+AGG - tig0023067:31875-31894 None:intergenic 40.0%
TTGTATCGAGAGGTAAGGTA+TGG - tig0023067:29727-29746 None:intergenic 40.0%
CTTGGTTTCAAAGTCTCCAT+TGG + tig0023067:29769-29788 Msa1404480:five_prime_UTR 40.0%
GTTATGTTTCATGCGCATTG+AGG - tig0023067:29816-29835 None:intergenic 40.0%
AGTGGTCTACCAAATAAACC+AGG - tig0023067:29939-29958 None:intergenic 40.0%
! AGGGAGGTACATATTGTATC+AGG - tig0023067:30099-30118 None:intergenic 40.0%
!! ATTTAAAGCGAGGGTTTTGG+TGG - tig0023067:30228-30247 None:intergenic 40.0%
AAATATCTTTCCACTAGGGC+TGG - tig0023067:30370-30389 None:intergenic 40.0%
CATCATTGTATCAACCCATG+TGG - tig0023067:30564-30583 None:intergenic 40.0%
! TACCTCGGTTTAGTCAGTTT+TGG + tig0023067:30716-30735 Msa1404480:intron 40.0%
!!! GGTTTAGTCAGTTTTGGAGT+CGG + tig0023067:30722-30741 Msa1404480:intron 40.0%
CAGTTGCTGATATCTTGCTA+TGG + tig0023067:30820-30839 Msa1404480:intron 40.0%
! TGGCTGGATTTTCAATGGTT+TGG + tig0023067:30871-30890 Msa1404480:CDS 40.0%
! GGTTTGGTTTCTCTTTGAAG+TGG + tig0023067:30887-30906 Msa1404480:CDS 40.0%
ATGCAGCTGGATTAATCACT+TGG + tig0023067:30982-31001 Msa1404480:CDS 40.0%
! TTCAGACAATAGCTGGTCTA+TGG + tig0023067:31568-31587 Msa1404480:intron 40.0%
! TTGTACAGCATTTTTGTGCC+TGG + tig0023067:31721-31740 Msa1404480:intron 40.0%
!! ACATAATTGGAAGTGTCACC+AGG - tig0023067:31742-31761 None:intergenic 40.0%
! GTGGACTATCTAGCAAGTAA+AGG + tig0023067:31782-31801 Msa1404480:CDS 40.0%
TGAACAATCTCTTCACGTCT+TGG - tig0023067:31811-31830 None:intergenic 40.0%
CAGTTCTCAATAGGATTCCA+AGG + tig0023067:31846-31865 Msa1404480:CDS 40.0%
GTTCTCAATAGGATTCCAAG+GGG + tig0023067:31848-31867 Msa1404480:CDS 40.0%
! CGGTACTTCTTTTCTTTCAC+AGG - tig0023067:31875-31894 None:intergenic 40.0%
!! GGTAAGGTATGGCTTTAGCA+TGG - tig0023067:29716-29735 None:intergenic 45.0%
TCTTACTCTTTCCTCCACCA+AGG - tig0023067:29971-29990 None:intergenic 45.0%
TATATGGGTGGTTGGAAAGC+AGG + tig0023067:30185-30204 Msa1404480:intron 45.0%
!! GGGATTTAAAGCGAGGGTTT+TGG - tig0023067:30231-30250 None:intergenic 45.0%
! TGTCGAGGGATTTAAAGCGA+GGG - tig0023067:30237-30256 None:intergenic 45.0%
! TTGTCGAGGGATTTAAAGCG+AGG - tig0023067:30238-30257 None:intergenic 45.0%
AGTTATTAGACCAGCCCTAG+TGG + tig0023067:30357-30376 Msa1404480:intron 45.0%
! TTTTAGTAGTCGTGGACTCG+TGG + tig0023067:30406-30425 Msa1404480:intron 45.0%
CAATCCATTGTCAGCTTGCA+GGG - tig0023067:30695-30714 None:intergenic 45.0%
!! CTGACAATGGATTGGTACCT+CGG + tig0023067:30701-30720 Msa1404480:intron 45.0%
CTCCAAAACTGACTAAACCG+AGG - tig0023067:30721-30740 None:intergenic 45.0%
GAAAACAACGGCAGCAATTG+TGG + tig0023067:30851-30870 Msa1404480:CDS 45.0%
GAATGAGCATAAGGGCTATG+AGG - tig0023067:30947-30966 None:intergenic 45.0%
AGAAAATGGTCTCAGTGGAG+AGG - tig0023067:31279-31298 None:intergenic 45.0%
GTATGAGCGGTATGAACATG+AGG + tig0023067:31760-31779 Msa1404480:CDS 45.0%
! TTTTCTTTCACAGGTCCCCT+TGG - tig0023067:31866-31885 None:intergenic 45.0%
!! GGTAAGGTATGGCTTTAGCA+TGG - tig0023067:29716-29735 None:intergenic 45.0%
TCTTACTCTTTCCTCCACCA+AGG - tig0023067:29971-29990 None:intergenic 45.0%
TATATGGGTGGTTGGAAAGC+AGG + tig0023067:30185-30204 Msa1404480:intron 45.0%
!! GGGATTTAAAGCGAGGGTTT+TGG - tig0023067:30231-30250 None:intergenic 45.0%
! TGTCGAGGGATTTAAAGCGA+GGG - tig0023067:30237-30256 None:intergenic 45.0%
! TTGTCGAGGGATTTAAAGCG+AGG - tig0023067:30238-30257 None:intergenic 45.0%
AGTTATTAGACCAGCCCTAG+TGG + tig0023067:30357-30376 Msa1404480:intron 45.0%
! TTTTAGTAGTCGTGGACTCG+TGG + tig0023067:30406-30425 Msa1404480:intron 45.0%
CAATCCATTGTCAGCTTGCA+GGG - tig0023067:30695-30714 None:intergenic 45.0%
!! CTGACAATGGATTGGTACCT+CGG + tig0023067:30701-30720 Msa1404480:intron 45.0%
CTCCAAAACTGACTAAACCG+AGG - tig0023067:30721-30740 None:intergenic 45.0%
GAAAACAACGGCAGCAATTG+TGG + tig0023067:30851-30870 Msa1404480:CDS 45.0%
GAATGAGCATAAGGGCTATG+AGG - tig0023067:30947-30966 None:intergenic 45.0%
AGAAAATGGTCTCAGTGGAG+AGG - tig0023067:31279-31298 None:intergenic 45.0%
GTATGAGCGGTATGAACATG+AGG + tig0023067:31760-31779 Msa1404480:CDS 45.0%
! TTTTCTTTCACAGGTCCCCT+TGG - tig0023067:31866-31885 None:intergenic 45.0%
!!! TAAAATTTTACTTTTATATA+TGG + tig0023067:30169-30188 Msa1404480:intron 5.0%
!!! AAAATTTTACTTTTATATAT+GGG + tig0023067:30170-30189 Msa1404480:intron 5.0%
!!! AATAATAAAATTAATTTGTT+TGG - tig0023067:31654-31673 None:intergenic 5.0%
!!! ACAAATTAATTTTATTATTT+AGG + tig0023067:31655-31674 Msa1404480:intron 5.0%
!! CATATTAATAATTAATAATA+AGG - tig0023067:31681-31700 None:intergenic 5.0%
!!! TAAAATTTTACTTTTATATA+TGG + tig0023067:30169-30188 Msa1404480:intron 5.0%
!!! AAAATTTTACTTTTATATAT+GGG + tig0023067:30170-30189 Msa1404480:intron 5.0%
!!! AATAATAAAATTAATTTGTT+TGG - tig0023067:31654-31673 None:intergenic 5.0%
!!! ACAAATTAATTTTATTATTT+AGG + tig0023067:31655-31674 Msa1404480:intron 5.0%
!! CATATTAATAATTAATAATA+AGG - tig0023067:31681-31700 None:intergenic 5.0%
CTTAATCATGTGTGGGCACG+AGG + tig0023067:29670-29689 Msa1404480:five_prime_UTR 50.0%
!! GGAACGGATTGGCATGACTA+TGG - tig0023067:29910-29929 None:intergenic 50.0%
!! CCAGGTTGATTGGAACGGAT+TGG - tig0023067:29921-29940 None:intergenic 50.0%
CCAATCCGTTCCAATCAACC+TGG + tig0023067:29918-29937 Msa1404480:CDS 50.0%
TTGGAAAGCAGGTCGGTCTA+AGG + tig0023067:30196-30215 Msa1404480:intron 50.0%
TGGAAAGCAGGTCGGTCTAA+GGG + tig0023067:30197-30216 Msa1404480:intron 50.0%
AGACGAGACGGAAATCCACA+TGG + tig0023067:30546-30565 Msa1404480:intron 50.0%
GACGAGACGGAAATCCACAT+GGG + tig0023067:30547-30566 Msa1404480:intron 50.0%
CCAATCCATTGTCAGCTTGC+AGG - tig0023067:30696-30715 None:intergenic 50.0%
CCTGCAAGCTGACAATGGAT+TGG + tig0023067:30693-30712 Msa1404480:intron 50.0%
GCATAAGGGCTATGAGGATG+TGG - tig0023067:30941-30960 None:intergenic 50.0%
TGAGCGGTATGAACATGAGG+TGG + tig0023067:31763-31782 Msa1404480:CDS 50.0%
CTTAATCATGTGTGGGCACG+AGG + tig0023067:29670-29689 Msa1404480:five_prime_UTR 50.0%
!! GGAACGGATTGGCATGACTA+TGG - tig0023067:29910-29929 None:intergenic 50.0%
!! CCAGGTTGATTGGAACGGAT+TGG - tig0023067:29921-29940 None:intergenic 50.0%
CCAATCCGTTCCAATCAACC+TGG + tig0023067:29918-29937 Msa1404480:CDS 50.0%
TTGGAAAGCAGGTCGGTCTA+AGG + tig0023067:30196-30215 Msa1404480:intron 50.0%
TGGAAAGCAGGTCGGTCTAA+GGG + tig0023067:30197-30216 Msa1404480:intron 50.0%
AGACGAGACGGAAATCCACA+TGG + tig0023067:30546-30565 Msa1404480:intron 50.0%
GACGAGACGGAAATCCACAT+GGG + tig0023067:30547-30566 Msa1404480:intron 50.0%
CCAATCCATTGTCAGCTTGC+AGG - tig0023067:30696-30715 None:intergenic 50.0%
CCTGCAAGCTGACAATGGAT+TGG + tig0023067:30693-30712 Msa1404480:intron 50.0%
GCATAAGGGCTATGAGGATG+TGG - tig0023067:30941-30960 None:intergenic 50.0%
TGAGCGGTATGAACATGAGG+TGG + tig0023067:31763-31782 Msa1404480:CDS 50.0%
AGACCACTTCACGCAGTCCT+TGG + tig0023067:29951-29970 Msa1404480:CDS 55.0%
TGGGTGGTTGGAAAGCAGGT+CGG + tig0023067:30189-30208 Msa1404480:intron 55.0%
AGCAGGTCGGTCTAAGGGTA+AGG + tig0023067:30202-30221 Msa1404480:intron 55.0%
TGGACCCTGCAAGCTGACAA+TGG + tig0023067:30688-30707 Msa1404480:intron 55.0%
ACAACGGCAGCAATTGTGGC+TGG + tig0023067:30855-30874 Msa1404480:CDS 55.0%
AGACCACTTCACGCAGTCCT+TGG + tig0023067:29951-29970 Msa1404480:CDS 55.0%
TGGGTGGTTGGAAAGCAGGT+CGG + tig0023067:30189-30208 Msa1404480:intron 55.0%
AGCAGGTCGGTCTAAGGGTA+AGG + tig0023067:30202-30221 Msa1404480:intron 55.0%
TGGACCCTGCAAGCTGACAA+TGG + tig0023067:30688-30707 Msa1404480:intron 55.0%
ACAACGGCAGCAATTGTGGC+TGG + tig0023067:30855-30874 Msa1404480:CDS 55.0%
CCACCAAGGACTGCGTGAAG+TGG - tig0023067:29957-29976 None:intergenic 60.0%
CCACTTCACGCAGTCCTTGG+TGG + tig0023067:29954-29973 Msa1404480:CDS 60.0%
CTTCACGCAGTCCTTGGTGG+AGG + tig0023067:29957-29976 Msa1404480:CDS 60.0%
CCACCAAGGACTGCGTGAAG+TGG - tig0023067:29957-29976 None:intergenic 60.0%
CCACTTCACGCAGTCCTTGG+TGG + tig0023067:29954-29973 Msa1404480:CDS 60.0%
CTTCACGCAGTCCTTGGTGG+AGG + tig0023067:29957-29976 Msa1404480:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0023067 gene 29664 32056 29664 ID=Msa1404480;Name=Msa1404480
tig0023067 mRNA 29664 32056 29664 ID=Msa1404480-mRNA-1;Parent=Msa1404480;Name=Msa1404480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=251|1|1|1|1|1|5|158|206
tig0023067 exon 29664 29984 29664 ID=Msa1404480-mRNA-1:exon:23644;Parent=Msa1404480-mRNA-1
tig0023067 exon 30823 31003 30823 ID=Msa1404480-mRNA-1:exon:23645;Parent=Msa1404480-mRNA-1
tig0023067 exon 31112 31241 31112 ID=Msa1404480-mRNA-1:exon:23646;Parent=Msa1404480-mRNA-1
tig0023067 exon 31573 31642 31573 ID=Msa1404480-mRNA-1:exon:23647;Parent=Msa1404480-mRNA-1
tig0023067 exon 31729 32056 31729 ID=Msa1404480-mRNA-1:exon:23648;Parent=Msa1404480-mRNA-1
tig0023067 five_prime_UTR 29664 29914 29664 ID=Msa1404480-mRNA-1:five_prime_utr;Parent=Msa1404480-mRNA-1
tig0023067 CDS 29915 29984 29915 ID=Msa1404480-mRNA-1:cds;Parent=Msa1404480-mRNA-1
tig0023067 CDS 30823 31003 30823 ID=Msa1404480-mRNA-1:cds;Parent=Msa1404480-mRNA-1
tig0023067 CDS 31112 31241 31112 ID=Msa1404480-mRNA-1:cds;Parent=Msa1404480-mRNA-1
tig0023067 CDS 31573 31642 31573 ID=Msa1404480-mRNA-1:cds;Parent=Msa1404480-mRNA-1
tig0023067 CDS 31729 31898 31729 ID=Msa1404480-mRNA-1:cds;Parent=Msa1404480-mRNA-1
tig0023067 three_prime_UTR 31899 32056 31899 ID=Msa1404480-mRNA-1:three_prime_utr;Parent=Msa1404480-mRNA-1
Gene Sequence

>Msa1404480

ATGCCAATCCGTTCCAATCAACCTGGTTTATTTGGTAGACCACTTCACGCAGTCCTTGGTGGAGGAAAGATTGCTGATATCTTGCTATGGAAAGACATGAAAACAACGGCAGCAATTGTGGCTGGATTTTCAATGGTTTGGTTTCTCTTTGAAGTGGTTGAATATAATCTTGTTACTCTGCTATGCCACATCCTCATAGCCCTTATGCTCATTCTCTTTATTTGGTATAATGCAGCTGGATTAATCACTTGGAAACTTCCTGATATCTATGATTTTGAAATCCCAGATTCTACCGTTAGATTCATTCATAAAAAGTTCAACTTGTTCTTGAGGAAATTTTATGACATTTCAACTGGGAAAGATCTTAGATTCTTCTTTGTGACAATAGCTGGTCTATGGATCATGTCTACTATTGGAAATTTCTTCAGCACTGTCAATTTACTATATACAACATTTTTGTGCCTGGTGACACTTCCAATTATGTATGAGCGGTATGAACATGAGGTGGACTATCTAGCAAGTAAAGGAAACCAAGACGTGAAGAGATTGTTCAACAAATTGGATTCTACAGTTCTCAATAGGATTCCAAGGGGACCTGTGAAAGAAAAGAAGTACCGATGA
Protein sequence

>Msa1404480

MPIRSNQPGLFGRPLHAVLGGGKIADILLWKDMKTTAAIVAGFSMVWFLFEVVEYNLVTLLCHILIALMLILFIWYNAAGLITWKLPDIYDFEIPDSTVRFIHKKFNLFLRKFYDISTGKDLRFFFVTIAGLWIMSTIGNFFSTVNLLYTTFLCLVTLPIMYERYEHEVDYLASKGNQDVKRLFNKLDSTVLNRIPRGPVKEKKYR*