Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530390 | XP_003604379.2 | 99.430 | 351 | 2 | 0 | 1 | 351 | 1 | 351 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530390 | sp|Q9FHX5|E1310_ARATH | 48.788 | 330 | 161 | 4 | 25 | 351 | 16 | 340 | 9.51e-106 | 321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530390 | A0A396I1A1 | 99.430 | 351 | 2 | 0 | 1 | 351 | 1 | 351 | 0.0 | 726 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003740 | Msa0530390 | 0.805813 | 1.113691e-49 | -8.615850e-47 |
| Msa0015150 | Msa0530390 | 0.805323 | 1.411020e-49 | -8.615850e-47 |
| Msa0043290 | Msa0530390 | 0.800262 | 1.565430e-48 | -8.615850e-47 |
| Msa0155180 | Msa0530390 | 0.833983 | 3.898455e-56 | -8.615850e-47 |
| Msa0182400 | Msa0530390 | 0.839686 | 1.366280e-57 | -8.615850e-47 |
| Msa0382530 | Msa0530390 | 0.805822 | 1.108621e-49 | -8.615850e-47 |
| Msa0427820 | Msa0530390 | 0.827294 | 1.694260e-54 | -8.615850e-47 |
| Msa0474060 | Msa0530390 | 0.826866 | 2.144046e-54 | -8.615850e-47 |
| Msa0268100 | Msa0530390 | 0.809907 | 1.500151e-50 | -8.615850e-47 |
| Msa0518680 | Msa0530390 | 0.806349 | 8.587788e-50 | -8.615850e-47 |
| Msa0525210 | Msa0530390 | 0.806641 | 7.454845e-50 | -8.615850e-47 |
| Msa0526010 | Msa0530390 | 0.817268 | 3.601408e-52 | -8.615850e-47 |
| Msa0530390 | Msa0587300 | 0.812269 | 4.615863e-51 | -8.615850e-47 |
| Msa0530390 | Msa0622110 | 0.817469 | 3.244491e-52 | -8.615850e-47 |
| Msa0530390 | Msa0627090 | 0.979095 | 3.191015e-147 | -8.615850e-47 |
| Msa0530390 | Msa0665160 | 0.991092 | 7.528442e-186 | -8.615850e-47 |
| Msa0530390 | Msa0741970 | 0.810860 | 9.344343e-51 | -8.615850e-47 |
| Msa0530390 | Msa0786230 | 0.813656 | 2.292199e-51 | -8.615850e-47 |
| Msa0530390 | Msa0823170 | 0.831306 | 1.798820e-55 | -8.615850e-47 |
| Msa0530390 | Msa0862170 | 0.822991 | 1.761258e-53 | -8.615850e-47 |
| Msa0530390 | Msa1039680 | 0.814130 | 1.801666e-51 | -8.615850e-47 |
| Msa0530390 | Msa1149000 | 0.835661 | 1.473995e-56 | -8.615850e-47 |
| Msa0530390 | Msa1149010 | 0.842136 | 3.109252e-58 | -8.615850e-47 |
| Msa0530390 | Msa1219820 | 0.805917 | 1.059160e-49 | -8.615850e-47 |
| Msa0530390 | Msa1267050 | 0.827338 | 1.653155e-54 | -8.615850e-47 |
| Msa0530390 | Msa1267180 | 0.824250 | 8.935746e-54 | -8.615850e-47 |
| Msa0530390 | Msa1304950 | 0.817160 | 3.807554e-52 | -8.615850e-47 |
| Msa0530390 | Msa1360930 | 0.839431 | 1.591062e-57 | -8.615850e-47 |
| Msa0530390 | Msa1401520 | 0.819799 | 9.608961e-53 | -8.615850e-47 |
| Msa0530390 | Msa1404480 | 0.842997 | 1.836648e-58 | -8.615850e-47 |
| Msa0530390 | Msa1429860 | 0.807394 | 5.163179e-50 | -8.615850e-47 |
| Msa0530390 | Msa1435630 | 0.808515 | 2.982162e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530390 | MtrunA17_Chr4g0003281 | 99.430 | 351 | 2 | 0 | 1 | 351 | 1 | 351 | 0.0 | 726 |
| Msa0530390 | MtrunA17_Chr4g0064021 | 61.290 | 341 | 130 | 1 | 34 | 374 | 20 | 358 | 1.25e-151 | 433 |
| Msa0530390 | MtrunA17_Chr4g0043851 | 47.443 | 352 | 180 | 2 | 35 | 386 | 27 | 373 | 5.61e-114 | 338 |
| Msa0530390 | MtrunA17_Chr1g0189111 | 52.698 | 315 | 147 | 2 | 37 | 351 | 28 | 340 | 9.73e-114 | 338 |
| Msa0530390 | MtrunA17_Chr2g0321511 | 45.665 | 346 | 177 | 4 | 8 | 351 | 1 | 337 | 3.24e-111 | 330 |
| Msa0530390 | MtrunA17_Chr2g0285901 | 49.196 | 311 | 156 | 2 | 40 | 350 | 24 | 332 | 1.87e-104 | 313 |
| Msa0530390 | MtrunA17_Chr4g0026321 | 45.687 | 313 | 169 | 1 | 39 | 351 | 28 | 339 | 1.36e-103 | 311 |
| Msa0530390 | MtrunA17_Chr5g0439251 | 47.468 | 316 | 164 | 2 | 38 | 352 | 23 | 337 | 9.27e-98 | 299 |
| Msa0530390 | MtrunA17_Chr1g0177171 | 45.981 | 311 | 166 | 2 | 38 | 347 | 36 | 345 | 2.00e-94 | 291 |
| Msa0530390 | MtrunA17_Chr4g0034901 | 42.566 | 343 | 193 | 2 | 8 | 350 | 1 | 339 | 8.41e-93 | 286 |
| Msa0530390 | MtrunA17_Chr1g0155001 | 44.373 | 311 | 172 | 1 | 41 | 350 | 25 | 335 | 1.23e-91 | 281 |
| Msa0530390 | MtrunA17_Chr3g0144531 | 42.262 | 336 | 190 | 2 | 15 | 350 | 7 | 338 | 3.46e-90 | 279 |
| Msa0530390 | MtrunA17_Chr8g0339191 | 40.533 | 338 | 194 | 5 | 18 | 351 | 9 | 343 | 4.92e-89 | 276 |
| Msa0530390 | MtrunA17_Chr7g0234821 | 42.222 | 315 | 177 | 4 | 41 | 351 | 27 | 340 | 2.22e-88 | 275 |
| Msa0530390 | MtrunA17_Chr3g0119541 | 45.016 | 311 | 169 | 2 | 41 | 350 | 27 | 336 | 2.62e-88 | 271 |
| Msa0530390 | MtrunA17_Chr1g0146831 | 43.042 | 309 | 169 | 4 | 41 | 347 | 32 | 335 | 8.70e-87 | 268 |
| Msa0530390 | MtrunA17_Chr6g0487261 | 40.653 | 337 | 198 | 2 | 17 | 353 | 5 | 339 | 2.48e-86 | 271 |
| Msa0530390 | MtrunA17_Chr8g0389741 | 43.226 | 310 | 175 | 1 | 41 | 350 | 29 | 337 | 1.43e-84 | 266 |
| Msa0530390 | MtrunA17_Chr4g0046311 | 36.778 | 329 | 201 | 4 | 29 | 351 | 12 | 339 | 1.44e-76 | 244 |
| Msa0530390 | MtrunA17_Chr3g0110371 | 40.000 | 335 | 194 | 3 | 20 | 351 | 7 | 337 | 4.85e-76 | 243 |
| Msa0530390 | MtrunA17_Chr1g0161011 | 37.644 | 348 | 212 | 3 | 41 | 384 | 25 | 371 | 2.29e-74 | 239 |
| Msa0530390 | MtrunA17_Chr5g0434591 | 36.927 | 371 | 227 | 4 | 18 | 384 | 3 | 370 | 3.08e-74 | 239 |
| Msa0530390 | MtrunA17_Chr7g0223961 | 40.446 | 314 | 178 | 7 | 39 | 350 | 22 | 328 | 6.21e-74 | 237 |
| Msa0530390 | MtrunA17_Chr4g0075031 | 35.817 | 349 | 219 | 3 | 41 | 385 | 46 | 393 | 9.77e-72 | 233 |
| Msa0530390 | MtrunA17_Chr3g0121271 | 38.438 | 333 | 195 | 5 | 18 | 347 | 10 | 335 | 1.10e-70 | 230 |
| Msa0530390 | MtrunA17_Chr7g0250301 | 39.032 | 310 | 180 | 5 | 41 | 350 | 9 | 309 | 4.77e-69 | 220 |
| Msa0530390 | MtrunA17_Chr4g0038971 | 37.838 | 333 | 188 | 7 | 16 | 348 | 4 | 317 | 5.85e-68 | 218 |
| Msa0530390 | MtrunA17_Chr2g0294601 | 39.286 | 308 | 178 | 6 | 41 | 347 | 60 | 359 | 2.06e-67 | 218 |
| Msa0530390 | MtrunA17_Chr4g0038981 | 37.910 | 335 | 189 | 7 | 16 | 350 | 4 | 319 | 3.09e-67 | 216 |
| Msa0530390 | MtrunA17_Chr8g0378621 | 36.716 | 335 | 203 | 4 | 20 | 351 | 11 | 339 | 3.94e-67 | 221 |
| Msa0530390 | MtrunA17_Chr4g0039011 | 38.462 | 312 | 179 | 5 | 39 | 350 | 41 | 339 | 5.20e-67 | 216 |
| Msa0530390 | MtrunA17_Chr4g0043511 | 40.705 | 312 | 179 | 6 | 41 | 350 | 63 | 370 | 3.08e-66 | 219 |
| Msa0530390 | MtrunA17_Chr4g0039021 | 38.699 | 292 | 170 | 3 | 66 | 357 | 7 | 289 | 3.35e-66 | 212 |
| Msa0530390 | MtrunA17_Chr4g0038941 | 39.432 | 317 | 176 | 7 | 36 | 350 | 46 | 348 | 1.01e-65 | 213 |
| Msa0530390 | MtrunA17_Chr4g0039071 | 38.438 | 320 | 185 | 6 | 37 | 352 | 19 | 330 | 1.25e-64 | 211 |
| Msa0530390 | MtrunA17_Chr4g0038961 | 38.065 | 310 | 178 | 6 | 41 | 350 | 24 | 319 | 1.30e-64 | 209 |
| Msa0530390 | MtrunA17_Chr2g0294591 | 37.338 | 308 | 184 | 6 | 41 | 347 | 31 | 330 | 2.79e-61 | 201 |
| Msa0530390 | MtrunA17_Chr1g0174261 | 39.085 | 284 | 166 | 4 | 69 | 352 | 1 | 277 | 4.42e-60 | 198 |
| Msa0530390 | MtrunA17_Chr4g0069801 | 35.977 | 353 | 193 | 12 | 12 | 351 | 7 | 339 | 1.90e-57 | 195 |
| Msa0530390 | MtrunA17_Chr1g0148391 | 36.842 | 342 | 198 | 10 | 17 | 352 | 9 | 338 | 8.93e-56 | 190 |
| Msa0530390 | MtrunA17_Chr8g0383311 | 33.815 | 346 | 214 | 11 | 14 | 352 | 18 | 355 | 4.33e-54 | 186 |
| Msa0530390 | MtrunA17_Chr7g0250321 | 37.879 | 264 | 156 | 4 | 41 | 304 | 29 | 284 | 1.26e-53 | 179 |
| Msa0530390 | MtrunA17_Chr6g0461601 | 36.615 | 325 | 183 | 13 | 41 | 352 | 27 | 341 | 2.88e-51 | 178 |
| Msa0530390 | MtrunA17_Chr4g0062771 | 33.427 | 356 | 215 | 13 | 8 | 352 | 1 | 345 | 2.72e-50 | 176 |
| Msa0530390 | MtrunA17_Chr7g0253091 | 34.012 | 344 | 208 | 12 | 19 | 352 | 5 | 339 | 5.06e-50 | 175 |
| Msa0530390 | MtrunA17_Chr3g0138741 | 34.796 | 319 | 194 | 10 | 41 | 352 | 32 | 343 | 8.27e-49 | 172 |
| Msa0530390 | MtrunA17_Chr3g0105981 | 35.220 | 318 | 194 | 8 | 41 | 353 | 28 | 338 | 1.59e-48 | 170 |
| Msa0530390 | MtrunA17_Chr2g0290821 | 33.542 | 319 | 200 | 9 | 41 | 352 | 29 | 342 | 3.99e-48 | 170 |
| Msa0530390 | MtrunA17_Chr4g0076581 | 35.202 | 321 | 190 | 10 | 41 | 352 | 34 | 345 | 1.04e-46 | 166 |
| Msa0530390 | MtrunA17_Chr2g0306311 | 31.383 | 376 | 213 | 14 | 11 | 352 | 6 | 370 | 1.64e-45 | 163 |
| Msa0530390 | MtrunA17_Chr3g0129341 | 32.849 | 344 | 210 | 14 | 18 | 352 | 13 | 344 | 2.25e-43 | 157 |
| Msa0530390 | MtrunA17_Chr5g0436361 | 33.110 | 299 | 188 | 8 | 57 | 351 | 54 | 344 | 1.19e-39 | 145 |
| Msa0530390 | MtrunA17_Chr2g0294581 | 38.806 | 134 | 81 | 1 | 41 | 173 | 77 | 210 | 2.97e-21 | 92.8 |
| Msa0530390 | MtrunA17_Chr4g0018861 | 45.055 | 91 | 43 | 4 | 258 | 347 | 79 | 163 | 2.96e-15 | 74.3 |
| Msa0530390 | MtrunA17_Chr4g0018771 | 42.353 | 85 | 44 | 2 | 263 | 347 | 86 | 165 | 8.85e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530390 | AT3G15800.1 | 73.270 | 318 | 84 | 1 | 35 | 351 | 38 | 355 | 6.95e-173 | 488 |
| Msa0530390 | AT2G26600.1 | 62.776 | 317 | 118 | 0 | 35 | 351 | 29 | 345 | 2.13e-151 | 433 |
| Msa0530390 | AT2G26600.2 | 63.415 | 246 | 90 | 0 | 106 | 351 | 6 | 251 | 2.97e-118 | 345 |
| Msa0530390 | AT5G42100.2 | 48.788 | 330 | 161 | 4 | 25 | 351 | 16 | 340 | 5.12e-107 | 322 |
| Msa0530390 | AT5G42100.1 | 48.788 | 330 | 161 | 4 | 25 | 351 | 16 | 340 | 9.67e-107 | 321 |
| Msa0530390 | AT2G27500.2 | 46.795 | 312 | 166 | 0 | 41 | 352 | 30 | 341 | 1.47e-106 | 318 |
| Msa0530390 | AT2G27500.1 | 46.795 | 312 | 166 | 0 | 41 | 352 | 30 | 341 | 4.74e-106 | 318 |
| Msa0530390 | AT1G30080.2 | 49.677 | 310 | 155 | 1 | 41 | 350 | 37 | 345 | 6.04e-106 | 317 |
| Msa0530390 | AT1G30080.1 | 49.677 | 310 | 155 | 1 | 41 | 350 | 37 | 345 | 1.03e-105 | 318 |
| Msa0530390 | AT4G18340.1 | 43.360 | 369 | 202 | 4 | 20 | 387 | 16 | 378 | 7.82e-105 | 315 |
| Msa0530390 | AT4G18340.2 | 43.631 | 369 | 201 | 4 | 20 | 387 | 16 | 378 | 8.93e-105 | 314 |
| Msa0530390 | AT1G32860.1 | 47.619 | 315 | 162 | 2 | 39 | 351 | 28 | 341 | 3.65e-102 | 309 |
| Msa0530390 | AT4G26830.1 | 46.429 | 336 | 173 | 3 | 13 | 347 | 2 | 331 | 5.27e-98 | 299 |
| Msa0530390 | AT4G26830.2 | 47.756 | 312 | 160 | 2 | 37 | 347 | 26 | 335 | 3.08e-96 | 295 |
| Msa0530390 | AT2G05790.1 | 46.815 | 314 | 165 | 2 | 38 | 350 | 23 | 335 | 9.65e-94 | 289 |
| Msa0530390 | AT4G34480.2 | 47.097 | 310 | 164 | 0 | 41 | 350 | 27 | 336 | 4.20e-93 | 283 |
| Msa0530390 | AT5G42720.1 | 46.945 | 311 | 164 | 1 | 41 | 350 | 27 | 337 | 2.06e-92 | 285 |
| Msa0530390 | AT2G16230.1 | 44.839 | 310 | 171 | 0 | 41 | 350 | 26 | 335 | 3.95e-92 | 286 |
| Msa0530390 | AT5G55180.2 | 44.444 | 315 | 171 | 3 | 35 | 347 | 22 | 334 | 3.19e-91 | 282 |
| Msa0530390 | AT5G55180.1 | 44.444 | 315 | 171 | 3 | 35 | 347 | 22 | 334 | 3.78e-91 | 282 |
| Msa0530390 | AT4G34480.1 | 47.097 | 310 | 164 | 0 | 41 | 350 | 27 | 336 | 6.71e-91 | 283 |
| Msa0530390 | AT5G24318.4 | 41.742 | 333 | 178 | 6 | 20 | 350 | 19 | 337 | 6.80e-91 | 278 |
| Msa0530390 | AT2G27500.3 | 47.710 | 262 | 137 | 0 | 91 | 352 | 2 | 263 | 3.57e-89 | 272 |
| Msa0530390 | AT5G24318.2 | 40.179 | 336 | 194 | 4 | 17 | 350 | 7 | 337 | 4.92e-89 | 276 |
| Msa0530390 | AT5G24318.1 | 40.179 | 336 | 194 | 4 | 17 | 350 | 7 | 337 | 6.42e-89 | 276 |
| Msa0530390 | AT3G07320.1 | 41.250 | 320 | 183 | 4 | 36 | 351 | 21 | 339 | 1.47e-86 | 270 |
| Msa0530390 | AT5G56590.1 | 41.009 | 317 | 186 | 1 | 35 | 350 | 21 | 337 | 1.12e-83 | 264 |
| Msa0530390 | AT2G01630.2 | 38.506 | 348 | 209 | 3 | 41 | 384 | 24 | 370 | 2.28e-80 | 252 |
| Msa0530390 | AT2G01630.3 | 38.506 | 348 | 209 | 3 | 41 | 384 | 24 | 370 | 8.39e-80 | 252 |
| Msa0530390 | AT2G01630.1 | 38.506 | 348 | 209 | 3 | 41 | 384 | 24 | 370 | 9.00e-79 | 251 |
| Msa0530390 | AT4G29360.2 | 42.173 | 313 | 180 | 1 | 41 | 353 | 38 | 349 | 1.06e-76 | 247 |
| Msa0530390 | AT4G29360.1 | 41.231 | 325 | 190 | 1 | 29 | 353 | 16 | 339 | 1.11e-76 | 247 |
| Msa0530390 | AT3G23770.1 | 36.842 | 323 | 197 | 4 | 35 | 351 | 32 | 353 | 3.70e-75 | 241 |
| Msa0530390 | AT3G13560.4 | 40.491 | 326 | 187 | 4 | 29 | 351 | 18 | 339 | 3.70e-73 | 237 |
| Msa0530390 | AT3G13560.1 | 40.491 | 326 | 187 | 4 | 29 | 351 | 18 | 339 | 3.70e-73 | 237 |
| Msa0530390 | AT3G13560.2 | 40.491 | 326 | 187 | 4 | 29 | 351 | 18 | 339 | 3.70e-73 | 237 |
| Msa0530390 | AT3G13560.5 | 40.491 | 326 | 187 | 4 | 29 | 351 | 18 | 339 | 3.70e-73 | 237 |
| Msa0530390 | AT3G13560.3 | 40.491 | 326 | 187 | 4 | 29 | 351 | 18 | 339 | 3.70e-73 | 237 |
| Msa0530390 | AT4G14080.1 | 36.392 | 316 | 193 | 5 | 41 | 351 | 43 | 355 | 5.99e-72 | 233 |
| Msa0530390 | AT1G11820.3 | 36.103 | 349 | 218 | 3 | 41 | 385 | 45 | 392 | 1.25e-71 | 232 |
| Msa0530390 | AT1G66250.1 | 39.185 | 319 | 188 | 4 | 38 | 352 | 29 | 345 | 3.33e-71 | 232 |
| Msa0530390 | AT1G11820.2 | 36.103 | 349 | 218 | 3 | 41 | 385 | 45 | 392 | 3.76e-71 | 232 |
| Msa0530390 | AT1G11820.1 | 38.387 | 310 | 187 | 2 | 41 | 347 | 45 | 353 | 5.41e-71 | 228 |
| Msa0530390 | AT3G46570.1 | 40.171 | 351 | 185 | 13 | 9 | 350 | 1 | 335 | 4.62e-68 | 219 |
| Msa0530390 | AT5G20390.1 | 38.835 | 309 | 179 | 6 | 41 | 348 | 34 | 333 | 5.12e-67 | 216 |
| Msa0530390 | AT3G61810.1 | 34.385 | 317 | 193 | 4 | 41 | 351 | 56 | 363 | 6.04e-64 | 209 |
| Msa0530390 | AT4G16260.1 | 35.455 | 330 | 200 | 6 | 20 | 347 | 4 | 322 | 9.94e-64 | 207 |
| Msa0530390 | AT4G34480.3 | 49.776 | 223 | 112 | 0 | 128 | 350 | 3 | 225 | 5.25e-63 | 207 |
| Msa0530390 | AT3G57270.1 | 36.656 | 311 | 188 | 5 | 38 | 347 | 25 | 327 | 2.29e-62 | 204 |
| Msa0530390 | AT1G77780.1 | 36.667 | 330 | 195 | 8 | 20 | 348 | 7 | 323 | 3.09e-62 | 204 |
| Msa0530390 | AT3G57260.1 | 35.435 | 333 | 200 | 7 | 18 | 350 | 12 | 329 | 8.35e-61 | 200 |
| Msa0530390 | AT3G57260.2 | 35.435 | 333 | 200 | 7 | 18 | 350 | 28 | 345 | 1.15e-60 | 200 |
| Msa0530390 | AT4G16260.2 | 35.644 | 303 | 182 | 6 | 47 | 347 | 2 | 293 | 4.99e-60 | 197 |
| Msa0530390 | AT5G20340.1 | 36.246 | 309 | 187 | 6 | 41 | 348 | 44 | 343 | 2.46e-59 | 196 |
| Msa0530390 | AT2G39640.1 | 35.905 | 337 | 203 | 8 | 15 | 350 | 7 | 331 | 5.56e-59 | 201 |
| Msa0530390 | AT3G55430.1 | 38.170 | 317 | 177 | 12 | 41 | 350 | 30 | 334 | 7.88e-58 | 195 |
| Msa0530390 | AT5G20330.1 | 36.570 | 309 | 186 | 6 | 41 | 348 | 35 | 334 | 1.13e-57 | 192 |
| Msa0530390 | AT1G33220.1 | 34.337 | 332 | 208 | 6 | 8 | 337 | 1 | 324 | 6.67e-57 | 189 |
| Msa0530390 | AT1G77790.1 | 37.380 | 313 | 184 | 7 | 41 | 350 | 31 | 334 | 1.26e-56 | 189 |
| Msa0530390 | AT5G24318.3 | 44.279 | 201 | 107 | 2 | 151 | 350 | 2 | 198 | 1.27e-54 | 183 |
| Msa0530390 | AT3G57240.1 | 34.194 | 310 | 190 | 6 | 38 | 347 | 33 | 328 | 2.36e-54 | 183 |
| Msa0530390 | AT5G64790.1 | 35.000 | 340 | 205 | 10 | 20 | 351 | 8 | 339 | 2.49e-54 | 187 |
| Msa0530390 | AT5G20870.1 | 37.152 | 323 | 186 | 10 | 41 | 351 | 31 | 348 | 2.66e-51 | 179 |
| Msa0530390 | AT4G31140.1 | 35.535 | 318 | 193 | 9 | 41 | 352 | 28 | 339 | 1.74e-50 | 177 |
| Msa0530390 | AT1G64760.1 | 35.174 | 344 | 202 | 12 | 20 | 352 | 4 | 337 | 3.13e-50 | 176 |
| Msa0530390 | AT1G64760.2 | 35.174 | 344 | 202 | 12 | 20 | 352 | 4 | 337 | 3.13e-50 | 176 |
| Msa0530390 | AT5G20560.1 | 33.036 | 336 | 212 | 7 | 18 | 348 | 8 | 335 | 2.46e-49 | 170 |
| Msa0530390 | AT2G19440.2 | 36.137 | 321 | 187 | 12 | 41 | 352 | 22 | 333 | 1.18e-48 | 172 |
| Msa0530390 | AT2G19440.1 | 36.137 | 321 | 187 | 12 | 41 | 352 | 22 | 333 | 1.18e-48 | 172 |
| Msa0530390 | AT5G18220.1 | 32.759 | 348 | 213 | 11 | 11 | 352 | 8 | 340 | 2.36e-48 | 171 |
| Msa0530390 | AT5G58090.1 | 34.385 | 317 | 196 | 9 | 41 | 351 | 23 | 333 | 1.63e-47 | 169 |
| Msa0530390 | AT3G04010.1 | 35.514 | 321 | 189 | 11 | 41 | 352 | 34 | 345 | 3.34e-47 | 168 |
| Msa0530390 | AT3G24330.1 | 33.983 | 359 | 206 | 16 | 5 | 352 | 15 | 353 | 7.96e-47 | 167 |
| Msa0530390 | AT5G58480.1 | 33.333 | 345 | 205 | 12 | 30 | 358 | 12 | 347 | 4.07e-44 | 159 |
| Msa0530390 | AT4G17180.1 | 32.537 | 335 | 203 | 12 | 27 | 352 | 12 | 332 | 2.82e-43 | 157 |
| Msa0530390 | AT3G55780.1 | 32.237 | 304 | 191 | 9 | 54 | 350 | 49 | 344 | 2.51e-40 | 147 |
Find 67 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCATCTTCATGTACATTT+AGG | 0.162171 | 4_1:-4464397 | Msa0530390:CDS |
| CCTCGTGTTCATTCTTTCTT+TGG | 0.185604 | 4_1:-4465372 | Msa0530390:CDS |
| AATTATAAATTGCAGGGAAT+TGG | 0.233656 | 4_1:-4463394 | Msa0530390:intron |
| GTGGTGGAAATATTGAAGTT+TGG | 0.257640 | 4_1:-4464535 | Msa0530390:CDS |
| AGAAGTGTAACCACACTTTC+AGG | 0.271942 | 4_1:+4464782 | None:intergenic |
| GTCATAATGTAGTTTACTTT+TGG | 0.276964 | 4_1:+4464214 | None:intergenic |
| GGGTATGCATTTATATAAAA+AGG | 0.279248 | 4_1:+4464317 | None:intergenic |
| ATTGTCTTTAATCCAGTTCA+TGG | 0.298902 | 4_1:+4464619 | None:intergenic |
| TTTATTTAGAAAATTGTTAC+AGG | 0.303318 | 4_1:+4463258 | None:intergenic |
| TTCTAAATAAATTGAATGTA+TGG | 0.317709 | 4_1:-4463246 | Msa0530390:three_prime_UTR |
| ACCATCTTCATGTACATTTA+GGG | 0.319187 | 4_1:-4464396 | Msa0530390:CDS |
| ATAGGCCTAAAATGTTGGTT+AGG | 0.346325 | 4_1:-4463995 | Msa0530390:CDS |
| GAAATTTGGGTTTGATAAGA+TGG | 0.348519 | 4_1:-4464147 | Msa0530390:CDS |
| TGGTGGAAATATTGAAGTTT+GGG | 0.349355 | 4_1:-4464534 | Msa0530390:CDS |
| ACCTTACATGAAACCTTTGT+TGG | 0.369026 | 4_1:-4464363 | Msa0530390:CDS |
| ATTATAAATTGCAGGGAATT+GGG | 0.372588 | 4_1:-4463393 | Msa0530390:intron |
| TTAGGGAACAAAGCATTTAC+AGG | 0.386581 | 4_1:-4464851 | Msa0530390:CDS |
| TGTCTTTCTGATCCTGGTCC+AGG | 0.404190 | 4_1:+4463936 | None:intergenic |
| GATTGTTTCTGAGACTGGTT+GGG | 0.414418 | 4_1:-4464120 | Msa0530390:CDS |
| TCCAACAAAGGTTTCATGTA+AGG | 0.416560 | 4_1:+4464362 | None:intergenic |
| CTAAGTGCCTTCAAAGGATC+TGG | 0.417558 | 4_1:-4464707 | Msa0530390:CDS |
| GCGAAGATCGAGCCATGAAC+TGG | 0.421344 | 4_1:-4464631 | Msa0530390:CDS |
| AAAGCATTTACAGGAACATA+TGG | 0.426078 | 4_1:-4464842 | Msa0530390:CDS |
| CAGATCCTTTGAAGGCACTT+AGG | 0.437728 | 4_1:+4464708 | None:intergenic |
| TCCTATTCCAGATCCTTTGA+AGG | 0.453072 | 4_1:+4464700 | None:intergenic |
| AGAGAAAAGGAACACCTCAT+AGG | 0.455796 | 4_1:-4464013 | Msa0530390:CDS |
| TTCAATGAGAATTTGAAGCC+TGG | 0.457788 | 4_1:-4463954 | Msa0530390:CDS |
| AAAATAGTTGGAATTGCCAT+TGG | 0.458980 | 4_1:-4464572 | Msa0530390:CDS |
| TAGGCCTAAAATGTTGGTTA+GGG | 0.461164 | 4_1:-4463994 | Msa0530390:CDS |
| CCAAAGTGTCTTTCTGATCC+TGG | 0.464550 | 4_1:+4463930 | None:intergenic |
| TTTGGATTATTTAATCATGA+TGG | 0.466918 | 4_1:-4463912 | Msa0530390:CDS |
| AAGAGGTTACTTAAGAGAAA+AGG | 0.468730 | 4_1:-4464026 | Msa0530390:CDS |
| GCTAAGACTTCAACATCAAA+TGG | 0.473387 | 4_1:-4465404 | Msa0530390:CDS |
| AATGTTCAACCATATCTTCC+AGG | 0.475716 | 4_1:-4464599 | Msa0530390:CDS |
| GCCTTCAAAGGATCTGGAAT+AGG | 0.476160 | 4_1:-4464701 | Msa0530390:CDS |
| GGAACATATGGAGTAAACTA+TGG | 0.476388 | 4_1:-4464830 | Msa0530390:CDS |
| GAAGTGTAACCACACTTTCA+GGG | 0.479495 | 4_1:+4464783 | None:intergenic |
| ACCTAAAATTTCATTTCCAA+TGG | 0.483236 | 4_1:+4464556 | None:intergenic |
| TTGCTAGGCCAAGTCTATCA+AGG | 0.491645 | 4_1:+4464474 | None:intergenic |
| GAAGTGATTGTTTCTGAGAC+TGG | 0.499216 | 4_1:-4464125 | Msa0530390:CDS |
| AATTGGGTCTTCATACATGA+TGG | 0.501687 | 4_1:-4463377 | Msa0530390:CDS |
| AAAGTACCTACCTAGAGAAA+AGG | 0.503724 | 4_1:+4465330 | None:intergenic |
| TGATTGTTTCTGAGACTGGT+TGG | 0.504115 | 4_1:-4464121 | Msa0530390:CDS |
| GAGACTGGTTGGGCCTCTCA+TGG | 0.506281 | 4_1:-4464110 | Msa0530390:CDS |
| ATGTCTGTCAAAAGTTCGTT+CGG | 0.507994 | 4_1:+4464662 | None:intergenic |
| AAACCTCAATTTGCTTTGCT+AGG | 0.509251 | 4_1:+4464459 | None:intergenic |
| GAGAATTTGAAGCCTGGACC+AGG | 0.516130 | 4_1:-4463948 | Msa0530390:CDS |
| GCAAATACAGCTTCTGAATG+TGG | 0.522800 | 4_1:+4464431 | None:intergenic |
| TGGCCTAGCAAAGCAAATTG+AGG | 0.526445 | 4_1:-4464462 | Msa0530390:CDS |
| CATGGTGATGATAATGAAGC+TGG | 0.527812 | 4_1:-4464092 | Msa0530390:CDS |
| TTGAAGGCACTTAGGACTTG+AGG | 0.530321 | 4_1:+4464716 | None:intergenic |
| AGTTTATGTCAATATGTTGA+GGG | 0.534313 | 4_1:+4464273 | None:intergenic |
| CCAGGATCAGAAAGACACTT+TGG | 0.537832 | 4_1:-4463930 | Msa0530390:CDS |
| TCCCTAAATGTACATGAAGA+TGG | 0.548834 | 4_1:+4464395 | None:intergenic |
| TAGTTTATGTCAATATGTTG+AGG | 0.553478 | 4_1:+4464272 | None:intergenic |
| ACCTCATAGGCCTAAAATGT+TGG | 0.556828 | 4_1:-4464000 | Msa0530390:CDS |
| TATAGTGCCCTTGATAGACT+TGG | 0.566519 | 4_1:-4464482 | Msa0530390:CDS |
| TTCATTATCATCACCATGAG+AGG | 0.570975 | 4_1:+4464097 | None:intergenic |
| CAAGTCCTAAGTGCCTTCAA+AGG | 0.599078 | 4_1:-4464713 | Msa0530390:CDS |
| AAGTGTAACCACACTTTCAG+GGG | 0.600505 | 4_1:+4464784 | None:intergenic |
| TGCTAGGCCAAGTCTATCAA+GGG | 0.613695 | 4_1:+4464475 | None:intergenic |
| CTAAATGTACATGAAGATGG+TGG | 0.619425 | 4_1:+4464398 | None:intergenic |
| TGTAAGAAAACAAATTAGAG+AGG | 0.625657 | 4_1:+4463166 | None:intergenic |
| CCAAAGAAAGAATGAACACG+AGG | 0.636038 | 4_1:+4465372 | None:intergenic |
| TTAGTGTTAACAAATTATGG+AGG | 0.643275 | 4_1:+4463140 | None:intergenic |
| TTATTTAGAAAATTGTTACA+GGG | 0.644962 | 4_1:+4463259 | None:intergenic |
| AGTGTAACCACACTTTCAGG+GGG | 0.724067 | 4_1:+4464785 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTTAATATAAAAATTGTA+AGG | + | chr4_1:4463598-4463617 | None:intergenic | 10.0% |
| !!! | TTACAATTTTTATATTAAAG+TGG | - | chr4_1:4463597-4463616 | Msa0530390:intron | 10.0% |
| !! | AATCAAATTTAAAAAATTTG+AGG | - | chr4_1:4465038-4465057 | Msa0530390:intron | 10.0% |
| !! | ATCAAATTTAAAAAATTTGA+GGG | - | chr4_1:4465039-4465058 | Msa0530390:intron | 10.0% |
| !! | ACTTTAATATAAAAATTGTA+AGG | + | chr4_1:4463598-4463617 | None:intergenic | 10.0% |
| !!! | TTACAATTTTTATATTAAAG+TGG | - | chr4_1:4463597-4463616 | Msa0530390:intron | 10.0% |
| !! | AATCAAATTTAAAAAATTTG+AGG | - | chr4_1:4465038-4465057 | Msa0530390:intron | 10.0% |
| !! | ATCAAATTTAAAAAATTTGA+GGG | - | chr4_1:4465039-4465058 | Msa0530390:intron | 10.0% |
| !! | AATAGAATAAACTTGAAATT+TGG | - | chr4_1:4463477-4463496 | Msa0530390:intron | 15.0% |
| !!! | CTTTCTCAAATTTTTATTAT+AGG | + | chr4_1:4464524-4464543 | None:intergenic | 15.0% |
| !! | ATAATAAAAATTTGAGAAAG+AGG | - | chr4_1:4464524-4464543 | Msa0530390:CDS | 15.0% |
| !!! | TTTTTTAAATTTGATTCTGA+TGG | + | chr4_1:4465034-4465053 | None:intergenic | 15.0% |
| !! | TTATTTAGAAAATTGTTACA+GGG | + | chr4_1:4465311-4465330 | None:intergenic | 15.0% |
| !! | TTTATTTAGAAAATTGTTAC+AGG | + | chr4_1:4465312-4465331 | None:intergenic | 15.0% |
| !! | TTCTAAATAAATTGAATGTA+TGG | - | chr4_1:4465321-4465340 | Msa0530390:intron | 15.0% |
| !! | AATAGAATAAACTTGAAATT+TGG | - | chr4_1:4463477-4463496 | Msa0530390:intron | 15.0% |
| !!! | CTTTCTCAAATTTTTATTAT+AGG | + | chr4_1:4464524-4464543 | None:intergenic | 15.0% |
| !! | ATAATAAAAATTTGAGAAAG+AGG | - | chr4_1:4464524-4464543 | Msa0530390:CDS | 15.0% |
| !!! | TTTTTTAAATTTGATTCTGA+TGG | + | chr4_1:4465034-4465053 | None:intergenic | 15.0% |
| !! | TTATTTAGAAAATTGTTACA+GGG | + | chr4_1:4465311-4465330 | None:intergenic | 15.0% |
| !! | TTTATTTAGAAAATTGTTAC+AGG | + | chr4_1:4465312-4465331 | None:intergenic | 15.0% |
| !! | TTCTAAATAAATTGAATGTA+TGG | - | chr4_1:4465321-4465340 | Msa0530390:intron | 15.0% |
| !! | TTTATGTAATTATACCACTA+TGG | - | chr4_1:4463326-4463345 | Msa0530390:CDS | 20.0% |
| !! | TTATATTAAAGTGGTGATTT+AGG | - | chr4_1:4463606-4463625 | Msa0530390:intron | 20.0% |
| !!! | TTGGAATTTTTTTCACAAAT+TGG | - | chr4_1:4464223-4464242 | Msa0530390:CDS | 20.0% |
| !! | TTTGGATTATTTAATCATGA+TGG | - | chr4_1:4464655-4464674 | Msa0530390:CDS | 20.0% |
| !! | AAAATGTAGAAAGGAAAAAA+TGG | + | chr4_1:4464763-4464782 | None:intergenic | 20.0% |
| !! | TACAAAAACAAAATGTAGAA+AGG | + | chr4_1:4464772-4464791 | None:intergenic | 20.0% |
| !! | ACATTAAAAAAAACGTCATA+AGG | + | chr4_1:4464999-4465018 | None:intergenic | 20.0% |
| !! | TTCTAACAATTATAAATTGC+AGG | - | chr4_1:4465166-4465185 | Msa0530390:intron | 20.0% |
| !! | TCTAACAATTATAAATTGCA+GGG | - | chr4_1:4465167-4465186 | Msa0530390:intron | 20.0% |
| !!! | CATAATTTGTTAACACTAAA+AGG | - | chr4_1:4465431-4465450 | Msa0530390:five_prime_UTR | 20.0% |
| !! | TTTATGTAATTATACCACTA+TGG | - | chr4_1:4463326-4463345 | Msa0530390:CDS | 20.0% |
| !! | TTATATTAAAGTGGTGATTT+AGG | - | chr4_1:4463606-4463625 | Msa0530390:intron | 20.0% |
| !!! | TTGGAATTTTTTTCACAAAT+TGG | - | chr4_1:4464223-4464242 | Msa0530390:CDS | 20.0% |
| !! | TTTGGATTATTTAATCATGA+TGG | - | chr4_1:4464655-4464674 | Msa0530390:CDS | 20.0% |
| !! | AAAATGTAGAAAGGAAAAAA+TGG | + | chr4_1:4464763-4464782 | None:intergenic | 20.0% |
| !! | TACAAAAACAAAATGTAGAA+AGG | + | chr4_1:4464772-4464791 | None:intergenic | 20.0% |
| !! | ACATTAAAAAAAACGTCATA+AGG | + | chr4_1:4464999-4465018 | None:intergenic | 20.0% |
| !! | TTCTAACAATTATAAATTGC+AGG | - | chr4_1:4465166-4465185 | Msa0530390:intron | 20.0% |
| !! | TCTAACAATTATAAATTGCA+GGG | - | chr4_1:4465167-4465186 | Msa0530390:intron | 20.0% |
| ! | CTTTGATGTTTCATAGAAAA+AGG | - | chr4_1:4463281-4463300 | Msa0530390:exon | 25.0% |
| !! | AAGGTACTTATTTGCAATTA+AGG | - | chr4_1:4463300-4463319 | Msa0530390:CDS | 25.0% |
| ! | AATAAGTGTGACTATTATGA+TGG | - | chr4_1:4463545-4463564 | Msa0530390:intron | 25.0% |
| ! | CCAAAGAAAAATTTGAAAGT+AGG | + | chr4_1:4463689-4463708 | None:intergenic | 25.0% |
| !! | CCTACTTTCAAATTTTTCTT+TGG | - | chr4_1:4463686-4463705 | Msa0530390:intron | 25.0% |
| ! | ACCTAAAATTTCATTTCCAA+TGG | + | chr4_1:4464014-4464033 | None:intergenic | 25.0% |
| !! | ATTGGAAATGAAATTTTAGG+TGG | - | chr4_1:4464013-4464032 | Msa0530390:CDS | 25.0% |
| ! | TGTGAAAAAAATTCCAACAA+AGG | + | chr4_1:4464220-4464239 | None:intergenic | 25.0% |
| ! | GGGTATGCATTTATATAAAA+AGG | + | chr4_1:4464253-4464272 | None:intergenic | 25.0% |
| !!! | TATAAATGCATACCCTTTTT+TGG | - | chr4_1:4464258-4464277 | Msa0530390:CDS | 25.0% |
| !! | CATTTTTATAGGCCAAAAAA+GGG | + | chr4_1:4464273-4464292 | None:intergenic | 25.0% |
| !!! | TCATTTTTATAGGCCAAAAA+AGG | + | chr4_1:4464274-4464293 | None:intergenic | 25.0% |
| ! | AGTTTATGTCAATATGTTGA+GGG | + | chr4_1:4464297-4464316 | None:intergenic | 25.0% |
| ! | TAGTTTATGTCAATATGTTG+AGG | + | chr4_1:4464298-4464317 | None:intergenic | 25.0% |
| !! | GTCATAATGTAGTTTACTTT+TGG | + | chr4_1:4464356-4464375 | None:intergenic | 25.0% |
| !! | TATTTTGCATTGGAGAAATT+TGG | - | chr4_1:4464406-4464425 | Msa0530390:CDS | 25.0% |
| !! | ATTTTGCATTGGAGAAATTT+GGG | - | chr4_1:4464407-4464426 | Msa0530390:CDS | 25.0% |
| ! | CTCTCTACGATAAATAATTA+AGG | + | chr4_1:4464868-4464887 | None:intergenic | 25.0% |
| ! | TTGTTAGAAATCTTTAAGCA+TGG | + | chr4_1:4465155-4465174 | None:intergenic | 25.0% |
| ! | AATTATAAATTGCAGGGAAT+TGG | - | chr4_1:4465173-4465192 | Msa0530390:intron | 25.0% |
| ! | ATTATAAATTGCAGGGAATT+GGG | - | chr4_1:4465174-4465193 | Msa0530390:intron | 25.0% |
| ! | TGTAAGAAAACAAATTAGAG+AGG | + | chr4_1:4465404-4465423 | None:intergenic | 25.0% |
| ! | TTAGTGTTAACAAATTATGG+AGG | + | chr4_1:4465430-4465449 | None:intergenic | 25.0% |
| ! | CTTTGATGTTTCATAGAAAA+AGG | - | chr4_1:4463281-4463300 | Msa0530390:exon | 25.0% |
| !! | AAGGTACTTATTTGCAATTA+AGG | - | chr4_1:4463300-4463319 | Msa0530390:CDS | 25.0% |
| ! | AATAAGTGTGACTATTATGA+TGG | - | chr4_1:4463545-4463564 | Msa0530390:intron | 25.0% |
| ! | CCAAAGAAAAATTTGAAAGT+AGG | + | chr4_1:4463689-4463708 | None:intergenic | 25.0% |
| !! | CCTACTTTCAAATTTTTCTT+TGG | - | chr4_1:4463686-4463705 | Msa0530390:intron | 25.0% |
| ! | ACCTAAAATTTCATTTCCAA+TGG | + | chr4_1:4464014-4464033 | None:intergenic | 25.0% |
| !! | ATTGGAAATGAAATTTTAGG+TGG | - | chr4_1:4464013-4464032 | Msa0530390:CDS | 25.0% |
| ! | TGTGAAAAAAATTCCAACAA+AGG | + | chr4_1:4464220-4464239 | None:intergenic | 25.0% |
| ! | GGGTATGCATTTATATAAAA+AGG | + | chr4_1:4464253-4464272 | None:intergenic | 25.0% |
| !!! | TATAAATGCATACCCTTTTT+TGG | - | chr4_1:4464258-4464277 | Msa0530390:CDS | 25.0% |
| !! | CATTTTTATAGGCCAAAAAA+GGG | + | chr4_1:4464273-4464292 | None:intergenic | 25.0% |
| !!! | TCATTTTTATAGGCCAAAAA+AGG | + | chr4_1:4464274-4464293 | None:intergenic | 25.0% |
| ! | AGTTTATGTCAATATGTTGA+GGG | + | chr4_1:4464297-4464316 | None:intergenic | 25.0% |
| ! | TAGTTTATGTCAATATGTTG+AGG | + | chr4_1:4464298-4464317 | None:intergenic | 25.0% |
| !! | GTCATAATGTAGTTTACTTT+TGG | + | chr4_1:4464356-4464375 | None:intergenic | 25.0% |
| !! | TATTTTGCATTGGAGAAATT+TGG | - | chr4_1:4464406-4464425 | Msa0530390:CDS | 25.0% |
| !! | ATTTTGCATTGGAGAAATTT+GGG | - | chr4_1:4464407-4464426 | Msa0530390:CDS | 25.0% |
| ! | CTCTCTACGATAAATAATTA+AGG | + | chr4_1:4464868-4464887 | None:intergenic | 25.0% |
| ! | TTGTTAGAAATCTTTAAGCA+TGG | + | chr4_1:4465155-4465174 | None:intergenic | 25.0% |
| ! | AATTATAAATTGCAGGGAAT+TGG | - | chr4_1:4465173-4465192 | Msa0530390:intron | 25.0% |
| ! | ATTATAAATTGCAGGGAATT+GGG | - | chr4_1:4465174-4465193 | Msa0530390:intron | 25.0% |
| ! | TGTAAGAAAACAAATTAGAG+AGG | + | chr4_1:4465404-4465423 | None:intergenic | 25.0% |
| ! | TTAGTGTTAACAAATTATGG+AGG | + | chr4_1:4465430-4465449 | None:intergenic | 25.0% |
| GTGAGATGTTTCATAGAAAA+AGG | - | chr4_1:4463348-4463367 | Msa0530390:CDS | 30.0% | |
| GTCAATACATATGTAGTTGT+TGG | - | chr4_1:4463401-4463420 | Msa0530390:intron | 30.0% | |
| TTGTTTGCTTTCTATACCAT+CGG | + | chr4_1:4463435-4463454 | None:intergenic | 30.0% | |
| !! | TTTTTCTTTGGTGCAGTATT+AGG | - | chr4_1:4463698-4463717 | Msa0530390:intron | 30.0% |
| !! | TTTTCTTTGGTGCAGTATTA+GGG | - | chr4_1:4463699-4463718 | Msa0530390:intron | 30.0% |
| ! | AAAGCATTTACAGGAACATA+TGG | - | chr4_1:4463725-4463744 | Msa0530390:intron | 30.0% |
| ATTGTCTTTAATCCAGTTCA+TGG | + | chr4_1:4463951-4463970 | None:intergenic | 30.0% | |
| ! | ATTTTTGTTCCTGGAAGATA+TGG | + | chr4_1:4463980-4463999 | None:intergenic | 30.0% |
| !!! | ATTCCAACTATTTTTGTTCC+TGG | + | chr4_1:4463989-4464008 | None:intergenic | 30.0% |
| AAAATAGTTGGAATTGCCAT+TGG | - | chr4_1:4463995-4464014 | Msa0530390:CDS | 30.0% | |
| ! | GCCATTGGAAATGAAATTTT+AGG | - | chr4_1:4464010-4464029 | Msa0530390:CDS | 30.0% |
| TGGTGGAAATATTGAAGTTT+GGG | - | chr4_1:4464033-4464052 | Msa0530390:CDS | 30.0% | |
| !!! | CTATAGATATTTTTTGCAGC+AGG | + | chr4_1:4464070-4464089 | None:intergenic | 30.0% |
| ACCATCTTCATGTACATTTA+GGG | - | chr4_1:4464171-4464190 | Msa0530390:CDS | 30.0% | |
| !!! | ATGTTGAGGGTCATTTTTAT+AGG | + | chr4_1:4464284-4464303 | None:intergenic | 30.0% |
| !! | GCTTTATTTAAGAAAAACCC+TGG | - | chr4_1:4464319-4464338 | Msa0530390:CDS | 30.0% |
| ! | GAAATTTGGGTTTGATAAGA+TGG | - | chr4_1:4464420-4464439 | Msa0530390:CDS | 30.0% |
| AAGAGGTTACTTAAGAGAAA+AGG | - | chr4_1:4464541-4464560 | Msa0530390:CDS | 30.0% | |
| ! | TAAACCCTAACCAACATTTT+AGG | + | chr4_1:4464580-4464599 | None:intergenic | 30.0% |
| !! | GGAAGTATTGCATATGATAT+TGG | - | chr4_1:4464676-4464695 | Msa0530390:CDS | 30.0% |
| GCATATGATATTGGATTTAC+TGG | - | chr4_1:4464685-4464704 | Msa0530390:CDS | 30.0% | |
| !! | AAATGGATTACATACCTTGA+AGG | + | chr4_1:4464746-4464765 | None:intergenic | 30.0% |
| GTGTGAGCTATAAATATAGT+TGG | + | chr4_1:4465083-4465102 | None:intergenic | 30.0% | |
| GATAAAACCAACCTAAATCA+TGG | + | chr4_1:4465118-4465137 | None:intergenic | 30.0% | |
| GTGAGATGTTTCATAGAAAA+AGG | - | chr4_1:4463348-4463367 | Msa0530390:CDS | 30.0% | |
| GTCAATACATATGTAGTTGT+TGG | - | chr4_1:4463401-4463420 | Msa0530390:intron | 30.0% | |
| TTGTTTGCTTTCTATACCAT+CGG | + | chr4_1:4463435-4463454 | None:intergenic | 30.0% | |
| !! | TTTTTCTTTGGTGCAGTATT+AGG | - | chr4_1:4463698-4463717 | Msa0530390:intron | 30.0% |
| !! | TTTTCTTTGGTGCAGTATTA+GGG | - | chr4_1:4463699-4463718 | Msa0530390:intron | 30.0% |
| ! | AAAGCATTTACAGGAACATA+TGG | - | chr4_1:4463725-4463744 | Msa0530390:intron | 30.0% |
| ATTGTCTTTAATCCAGTTCA+TGG | + | chr4_1:4463951-4463970 | None:intergenic | 30.0% | |
| ! | ATTTTTGTTCCTGGAAGATA+TGG | + | chr4_1:4463980-4463999 | None:intergenic | 30.0% |
| !!! | ATTCCAACTATTTTTGTTCC+TGG | + | chr4_1:4463989-4464008 | None:intergenic | 30.0% |
| AAAATAGTTGGAATTGCCAT+TGG | - | chr4_1:4463995-4464014 | Msa0530390:CDS | 30.0% | |
| ! | GCCATTGGAAATGAAATTTT+AGG | - | chr4_1:4464010-4464029 | Msa0530390:CDS | 30.0% |
| TGGTGGAAATATTGAAGTTT+GGG | - | chr4_1:4464033-4464052 | Msa0530390:CDS | 30.0% | |
| !!! | CTATAGATATTTTTTGCAGC+AGG | + | chr4_1:4464070-4464089 | None:intergenic | 30.0% |
| ACCATCTTCATGTACATTTA+GGG | - | chr4_1:4464171-4464190 | Msa0530390:CDS | 30.0% | |
| !!! | ATGTTGAGGGTCATTTTTAT+AGG | + | chr4_1:4464284-4464303 | None:intergenic | 30.0% |
| !! | GCTTTATTTAAGAAAAACCC+TGG | - | chr4_1:4464319-4464338 | Msa0530390:CDS | 30.0% |
| ! | GAAATTTGGGTTTGATAAGA+TGG | - | chr4_1:4464420-4464439 | Msa0530390:CDS | 30.0% |
| AAGAGGTTACTTAAGAGAAA+AGG | - | chr4_1:4464541-4464560 | Msa0530390:CDS | 30.0% | |
| ! | TAAACCCTAACCAACATTTT+AGG | + | chr4_1:4464580-4464599 | None:intergenic | 30.0% |
| !! | GGAAGTATTGCATATGATAT+TGG | - | chr4_1:4464676-4464695 | Msa0530390:CDS | 30.0% |
| GCATATGATATTGGATTTAC+TGG | - | chr4_1:4464685-4464704 | Msa0530390:CDS | 30.0% | |
| !! | AAATGGATTACATACCTTGA+AGG | + | chr4_1:4464746-4464765 | None:intergenic | 30.0% |
| GTGTGAGCTATAAATATAGT+TGG | + | chr4_1:4465083-4465102 | None:intergenic | 30.0% | |
| GATAAAACCAACCTAAATCA+TGG | + | chr4_1:4465118-4465137 | None:intergenic | 30.0% | |
| GCTAAGACTTCAACATCAAA+TGG | - | chr4_1:4463163-4463182 | Msa0530390:three_prime_UTR | 35.0% | |
| ! | TTATCAGCAACCTTTTCTCT+AGG | - | chr4_1:4463227-4463246 | Msa0530390:three_prime_UTR | 35.0% |
| ! | AAAGTACCTACCTAGAGAAA+AGG | + | chr4_1:4463240-4463259 | None:intergenic | 35.0% |
| TATGAAACATCTCACCATAG+TGG | + | chr4_1:4463343-4463362 | None:intergenic | 35.0% | |
| ATCGTTAGATCAACATCAGA+CGG | + | chr4_1:4463504-4463523 | None:intergenic | 35.0% | |
| !! | ATGCATTGCTTTTCATGACA+TGG | - | chr4_1:4463654-4463673 | Msa0530390:intron | 35.0% |
| ! | TTAGGGAACAAAGCATTTAC+AGG | - | chr4_1:4463716-4463735 | Msa0530390:intron | 35.0% |
| GGAACATATGGAGTAAACTA+TGG | - | chr4_1:4463737-4463756 | Msa0530390:intron | 35.0% | |
| ATGTCTGTCAAAAGTTCGTT+CGG | + | chr4_1:4463908-4463927 | None:intergenic | 35.0% | |
| ! | AACGAACTTTTGACAGACAT+AGG | - | chr4_1:4463908-4463927 | Msa0530390:intron | 35.0% |
| AATGTTCAACCATATCTTCC+AGG | - | chr4_1:4463968-4463987 | Msa0530390:CDS | 35.0% | |
| CTTCCAGGAACAAAAATAGT+TGG | - | chr4_1:4463983-4464002 | Msa0530390:CDS | 35.0% | |
| !! | GGAAATGAAATTTTAGGTGG+TGG | - | chr4_1:4464016-4464035 | Msa0530390:CDS | 35.0% |
| ! | GTGGTGGAAATATTGAAGTT+TGG | - | chr4_1:4464032-4464051 | Msa0530390:CDS | 35.0% |
| ! | AAACCTCAATTTGCTTTGCT+AGG | + | chr4_1:4464111-4464130 | None:intergenic | 35.0% |
| CTAAATGTACATGAAGATGG+TGG | + | chr4_1:4464172-4464191 | None:intergenic | 35.0% | |
| CACCATCTTCATGTACATTT+AGG | - | chr4_1:4464170-4464189 | Msa0530390:CDS | 35.0% | |
| TCCCTAAATGTACATGAAGA+TGG | + | chr4_1:4464175-4464194 | None:intergenic | 35.0% | |
| ACCTTACATGAAACCTTTGT+TGG | - | chr4_1:4464204-4464223 | Msa0530390:CDS | 35.0% | |
| TCCAACAAAGGTTTCATGTA+AGG | + | chr4_1:4464208-4464227 | None:intergenic | 35.0% | |
| ! | TTTTGGCATCATAAATGCCA+GGG | + | chr4_1:4464339-4464358 | None:intergenic | 35.0% |
| !!! | TGATGCTGCTTATTTTGCAT+TGG | - | chr4_1:4464396-4464415 | Msa0530390:CDS | 35.0% |
| TTCATTATCATCACCATGAG+AGG | + | chr4_1:4464473-4464492 | None:intergenic | 35.0% | |
| ! | ATAGGCCTAAAATGTTGGTT+AGG | - | chr4_1:4464572-4464591 | Msa0530390:CDS | 35.0% |
| ! | TAGGCCTAAAATGTTGGTTA+GGG | - | chr4_1:4464573-4464592 | Msa0530390:CDS | 35.0% |
| ! | TTCAATGAGAATTTGAAGCC+TGG | - | chr4_1:4464613-4464632 | Msa0530390:CDS | 35.0% |
| GATTACATACCTTGAAGGAA+AGG | + | chr4_1:4464741-4464760 | None:intergenic | 35.0% | |
| AGCATACTAGTCCATGATTT+AGG | - | chr4_1:4465104-4465123 | Msa0530390:intron | 35.0% | |
| TACTAGTCCATGATTTAGGT+TGG | - | chr4_1:4465108-4465127 | Msa0530390:intron | 35.0% | |
| AAGCATGGTAGTTATGCATA+AGG | + | chr4_1:4465140-4465159 | None:intergenic | 35.0% | |
| AATTGGGTCTTCATACATGA+TGG | - | chr4_1:4465190-4465209 | Msa0530390:intron | 35.0% | |
| GCTAAGACTTCAACATCAAA+TGG | - | chr4_1:4463163-4463182 | Msa0530390:three_prime_UTR | 35.0% | |
| ! | TTATCAGCAACCTTTTCTCT+AGG | - | chr4_1:4463227-4463246 | Msa0530390:three_prime_UTR | 35.0% |
| ! | AAAGTACCTACCTAGAGAAA+AGG | + | chr4_1:4463240-4463259 | None:intergenic | 35.0% |
| TATGAAACATCTCACCATAG+TGG | + | chr4_1:4463343-4463362 | None:intergenic | 35.0% | |
| ATCGTTAGATCAACATCAGA+CGG | + | chr4_1:4463504-4463523 | None:intergenic | 35.0% | |
| !! | ATGCATTGCTTTTCATGACA+TGG | - | chr4_1:4463654-4463673 | Msa0530390:intron | 35.0% |
| ! | TTAGGGAACAAAGCATTTAC+AGG | - | chr4_1:4463716-4463735 | Msa0530390:intron | 35.0% |
| GGAACATATGGAGTAAACTA+TGG | - | chr4_1:4463737-4463756 | Msa0530390:intron | 35.0% | |
| ATGTCTGTCAAAAGTTCGTT+CGG | + | chr4_1:4463908-4463927 | None:intergenic | 35.0% | |
| ! | AACGAACTTTTGACAGACAT+AGG | - | chr4_1:4463908-4463927 | Msa0530390:intron | 35.0% |
| AATGTTCAACCATATCTTCC+AGG | - | chr4_1:4463968-4463987 | Msa0530390:CDS | 35.0% | |
| CTTCCAGGAACAAAAATAGT+TGG | - | chr4_1:4463983-4464002 | Msa0530390:CDS | 35.0% | |
| !! | GGAAATGAAATTTTAGGTGG+TGG | - | chr4_1:4464016-4464035 | Msa0530390:CDS | 35.0% |
| ! | GTGGTGGAAATATTGAAGTT+TGG | - | chr4_1:4464032-4464051 | Msa0530390:CDS | 35.0% |
| ! | AAACCTCAATTTGCTTTGCT+AGG | + | chr4_1:4464111-4464130 | None:intergenic | 35.0% |
| CTAAATGTACATGAAGATGG+TGG | + | chr4_1:4464172-4464191 | None:intergenic | 35.0% | |
| CACCATCTTCATGTACATTT+AGG | - | chr4_1:4464170-4464189 | Msa0530390:CDS | 35.0% | |
| TCCCTAAATGTACATGAAGA+TGG | + | chr4_1:4464175-4464194 | None:intergenic | 35.0% | |
| ACCTTACATGAAACCTTTGT+TGG | - | chr4_1:4464204-4464223 | Msa0530390:CDS | 35.0% | |
| TCCAACAAAGGTTTCATGTA+AGG | + | chr4_1:4464208-4464227 | None:intergenic | 35.0% | |
| ! | TTTTGGCATCATAAATGCCA+GGG | + | chr4_1:4464339-4464358 | None:intergenic | 35.0% |
| !!! | TGATGCTGCTTATTTTGCAT+TGG | - | chr4_1:4464396-4464415 | Msa0530390:CDS | 35.0% |
| TTCATTATCATCACCATGAG+AGG | + | chr4_1:4464473-4464492 | None:intergenic | 35.0% | |
| ! | ATAGGCCTAAAATGTTGGTT+AGG | - | chr4_1:4464572-4464591 | Msa0530390:CDS | 35.0% |
| ! | TAGGCCTAAAATGTTGGTTA+GGG | - | chr4_1:4464573-4464592 | Msa0530390:CDS | 35.0% |
| ! | TTCAATGAGAATTTGAAGCC+TGG | - | chr4_1:4464613-4464632 | Msa0530390:CDS | 35.0% |
| GATTACATACCTTGAAGGAA+AGG | + | chr4_1:4464741-4464760 | None:intergenic | 35.0% | |
| AGCATACTAGTCCATGATTT+AGG | - | chr4_1:4465104-4465123 | Msa0530390:intron | 35.0% | |
| TACTAGTCCATGATTTAGGT+TGG | - | chr4_1:4465108-4465127 | Msa0530390:intron | 35.0% | |
| AAGCATGGTAGTTATGCATA+AGG | + | chr4_1:4465140-4465159 | None:intergenic | 35.0% | |
| AATTGGGTCTTCATACATGA+TGG | - | chr4_1:4465190-4465209 | Msa0530390:intron | 35.0% | |
| CCAAAGAAAGAATGAACACG+AGG | + | chr4_1:4463198-4463217 | None:intergenic | 40.0% | |
| CCTCGTGTTCATTCTTTCTT+TGG | - | chr4_1:4463195-4463214 | Msa0530390:three_prime_UTR | 40.0% | |
| TATTCATGCAGTCAGCACAT+TGG | + | chr4_1:4463529-4463548 | None:intergenic | 40.0% | |
| AAGTGTAACCACACTTTCAG+GGG | + | chr4_1:4463786-4463805 | None:intergenic | 40.0% | |
| GAAGTGTAACCACACTTTCA+GGG | + | chr4_1:4463787-4463806 | None:intergenic | 40.0% | |
| ! | AGAAGTGTAACCACACTTTC+AGG | + | chr4_1:4463788-4463807 | None:intergenic | 40.0% |
| TCCTATTCCAGATCCTTTGA+AGG | + | chr4_1:4463870-4463889 | None:intergenic | 40.0% | |
| ! | CTTTTGACAGACATAGGTGT+AGG | - | chr4_1:4463914-4463933 | Msa0530390:CDS | 40.0% |
| TATAGTGCCCTTGATAGACT+TGG | - | chr4_1:4464085-4464104 | Msa0530390:CDS | 40.0% | |
| GCAAATACAGCTTCTGAATG+TGG | + | chr4_1:4464139-4464158 | None:intergenic | 40.0% | |
| ! | CTTTTGGCATCATAAATGCC+AGG | + | chr4_1:4464340-4464359 | None:intergenic | 40.0% |
| !! | GAAGTGATTGTTTCTGAGAC+TGG | - | chr4_1:4464442-4464461 | Msa0530390:CDS | 40.0% |
| !! | TGATTGTTTCTGAGACTGGT+TGG | - | chr4_1:4464446-4464465 | Msa0530390:CDS | 40.0% |
| !! | GATTGTTTCTGAGACTGGTT+GGG | - | chr4_1:4464447-4464466 | Msa0530390:CDS | 40.0% |
| ! | CATGGTGATGATAATGAAGC+TGG | - | chr4_1:4464475-4464494 | Msa0530390:CDS | 40.0% |
| AGAGAAAAGGAACACCTCAT+AGG | - | chr4_1:4464554-4464573 | Msa0530390:CDS | 40.0% | |
| ACCTCATAGGCCTAAAATGT+TGG | - | chr4_1:4464567-4464586 | Msa0530390:CDS | 40.0% | |
| ! | ACCAACATTTTAGGCCTATG+AGG | + | chr4_1:4464571-4464590 | None:intergenic | 40.0% |
| TACCTTGAAGGAAAGGAAAG+AGG | + | chr4_1:4464734-4464753 | None:intergenic | 40.0% | |
| CCAAAGAAAGAATGAACACG+AGG | + | chr4_1:4463198-4463217 | None:intergenic | 40.0% | |
| CCTCGTGTTCATTCTTTCTT+TGG | - | chr4_1:4463195-4463214 | Msa0530390:three_prime_UTR | 40.0% | |
| TATTCATGCAGTCAGCACAT+TGG | + | chr4_1:4463529-4463548 | None:intergenic | 40.0% | |
| AAGTGTAACCACACTTTCAG+GGG | + | chr4_1:4463786-4463805 | None:intergenic | 40.0% | |
| GAAGTGTAACCACACTTTCA+GGG | + | chr4_1:4463787-4463806 | None:intergenic | 40.0% | |
| ! | AGAAGTGTAACCACACTTTC+AGG | + | chr4_1:4463788-4463807 | None:intergenic | 40.0% |
| TCCTATTCCAGATCCTTTGA+AGG | + | chr4_1:4463870-4463889 | None:intergenic | 40.0% | |
| ! | CTTTTGACAGACATAGGTGT+AGG | - | chr4_1:4463914-4463933 | Msa0530390:CDS | 40.0% |
| TATAGTGCCCTTGATAGACT+TGG | - | chr4_1:4464085-4464104 | Msa0530390:CDS | 40.0% | |
| GCAAATACAGCTTCTGAATG+TGG | + | chr4_1:4464139-4464158 | None:intergenic | 40.0% | |
| ! | CTTTTGGCATCATAAATGCC+AGG | + | chr4_1:4464340-4464359 | None:intergenic | 40.0% |
| !! | GAAGTGATTGTTTCTGAGAC+TGG | - | chr4_1:4464442-4464461 | Msa0530390:CDS | 40.0% |
| !! | TGATTGTTTCTGAGACTGGT+TGG | - | chr4_1:4464446-4464465 | Msa0530390:CDS | 40.0% |
| !! | GATTGTTTCTGAGACTGGTT+GGG | - | chr4_1:4464447-4464466 | Msa0530390:CDS | 40.0% |
| ! | CATGGTGATGATAATGAAGC+TGG | - | chr4_1:4464475-4464494 | Msa0530390:CDS | 40.0% |
| AGAGAAAAGGAACACCTCAT+AGG | - | chr4_1:4464554-4464573 | Msa0530390:CDS | 40.0% | |
| ACCTCATAGGCCTAAAATGT+TGG | - | chr4_1:4464567-4464586 | Msa0530390:CDS | 40.0% | |
| ! | ACCAACATTTTAGGCCTATG+AGG | + | chr4_1:4464571-4464590 | None:intergenic | 40.0% |
| TACCTTGAAGGAAAGGAAAG+AGG | + | chr4_1:4464734-4464753 | None:intergenic | 40.0% | |
| ! | CAGCAACCTTTTCTCTAGGT+AGG | - | chr4_1:4463231-4463250 | Msa0530390:three_prime_UTR | 45.0% |
| CACAATTCCACACATTCACG+TGG | - | chr4_1:4463379-4463398 | Msa0530390:CDS | 45.0% | |
| ! | GTATTGACCACGTGAATGTG+TGG | + | chr4_1:4463389-4463408 | None:intergenic | 45.0% |
| GTTGTTGGATCGAAATCCGA+TGG | - | chr4_1:4463416-4463435 | Msa0530390:intron | 45.0% | |
| AGTGTAACCACACTTTCAGG+GGG | + | chr4_1:4463785-4463804 | None:intergenic | 45.0% | |
| !! | TTGAAGGCACTTAGGACTTG+AGG | + | chr4_1:4463854-4463873 | None:intergenic | 45.0% |
| CAAGTCCTAAGTGCCTTCAA+AGG | - | chr4_1:4463854-4463873 | Msa0530390:intron | 45.0% | |
| !! | CAGATCCTTTGAAGGCACTT+AGG | + | chr4_1:4463862-4463881 | None:intergenic | 45.0% |
| CTAAGTGCCTTCAAAGGATC+TGG | - | chr4_1:4463860-4463879 | Msa0530390:intron | 45.0% | |
| ! | GCCTTCAAAGGATCTGGAAT+AGG | - | chr4_1:4463866-4463885 | Msa0530390:intron | 45.0% |
| TGCTAGGCCAAGTCTATCAA+GGG | + | chr4_1:4464095-4464114 | None:intergenic | 45.0% | |
| TTGCTAGGCCAAGTCTATCA+AGG | + | chr4_1:4464096-4464115 | None:intergenic | 45.0% | |
| TGGCCTAGCAAAGCAAATTG+AGG | - | chr4_1:4464105-4464124 | Msa0530390:CDS | 45.0% | |
| ! | CCAAAGTGTCTTTCTGATCC+TGG | + | chr4_1:4464640-4464659 | None:intergenic | 45.0% |
| CCAGGATCAGAAAGACACTT+TGG | - | chr4_1:4464637-4464656 | Msa0530390:CDS | 45.0% | |
| CTTGAAGGAAAGGAAAGAGG+AGG | + | chr4_1:4464731-4464750 | None:intergenic | 45.0% | |
| CTCCTCTTTCCTTTCCTTCA+AGG | - | chr4_1:4464729-4464748 | Msa0530390:CDS | 45.0% | |
| ! | CAGCAACCTTTTCTCTAGGT+AGG | - | chr4_1:4463231-4463250 | Msa0530390:three_prime_UTR | 45.0% |
| CACAATTCCACACATTCACG+TGG | - | chr4_1:4463379-4463398 | Msa0530390:CDS | 45.0% | |
| ! | GTATTGACCACGTGAATGTG+TGG | + | chr4_1:4463389-4463408 | None:intergenic | 45.0% |
| GTTGTTGGATCGAAATCCGA+TGG | - | chr4_1:4463416-4463435 | Msa0530390:intron | 45.0% | |
| AGTGTAACCACACTTTCAGG+GGG | + | chr4_1:4463785-4463804 | None:intergenic | 45.0% | |
| !! | TTGAAGGCACTTAGGACTTG+AGG | + | chr4_1:4463854-4463873 | None:intergenic | 45.0% |
| CAAGTCCTAAGTGCCTTCAA+AGG | - | chr4_1:4463854-4463873 | Msa0530390:intron | 45.0% | |
| !! | CAGATCCTTTGAAGGCACTT+AGG | + | chr4_1:4463862-4463881 | None:intergenic | 45.0% |
| CTAAGTGCCTTCAAAGGATC+TGG | - | chr4_1:4463860-4463879 | Msa0530390:intron | 45.0% | |
| ! | GCCTTCAAAGGATCTGGAAT+AGG | - | chr4_1:4463866-4463885 | Msa0530390:intron | 45.0% |
| TGCTAGGCCAAGTCTATCAA+GGG | + | chr4_1:4464095-4464114 | None:intergenic | 45.0% | |
| TTGCTAGGCCAAGTCTATCA+AGG | + | chr4_1:4464096-4464115 | None:intergenic | 45.0% | |
| TGGCCTAGCAAAGCAAATTG+AGG | - | chr4_1:4464105-4464124 | Msa0530390:CDS | 45.0% | |
| ! | CCAAAGTGTCTTTCTGATCC+TGG | + | chr4_1:4464640-4464659 | None:intergenic | 45.0% |
| CCAGGATCAGAAAGACACTT+TGG | - | chr4_1:4464637-4464656 | Msa0530390:CDS | 45.0% | |
| CTTGAAGGAAAGGAAAGAGG+AGG | + | chr4_1:4464731-4464750 | None:intergenic | 45.0% | |
| CTCCTCTTTCCTTTCCTTCA+AGG | - | chr4_1:4464729-4464748 | Msa0530390:CDS | 45.0% | |
| ! | GAGAATTTGAAGCCTGGACC+AGG | - | chr4_1:4464619-4464638 | Msa0530390:CDS | 50.0% |
| TGTCTTTCTGATCCTGGTCC+AGG | + | chr4_1:4464634-4464653 | None:intergenic | 50.0% | |
| AAAGAGGAGGTTGCTGAGGA+AGG | + | chr4_1:4464718-4464737 | None:intergenic | 50.0% | |
| AAGGAAAGAGGAGGTTGCTG+AGG | + | chr4_1:4464722-4464741 | None:intergenic | 50.0% | |
| ! | GAGAATTTGAAGCCTGGACC+AGG | - | chr4_1:4464619-4464638 | Msa0530390:CDS | 50.0% |
| TGTCTTTCTGATCCTGGTCC+AGG | + | chr4_1:4464634-4464653 | None:intergenic | 50.0% | |
| AAAGAGGAGGTTGCTGAGGA+AGG | + | chr4_1:4464718-4464737 | None:intergenic | 50.0% | |
| AAGGAAAGAGGAGGTTGCTG+AGG | + | chr4_1:4464722-4464741 | None:intergenic | 50.0% | |
| TCTACCTCCCCCTGAAAGTG+TGG | - | chr4_1:4463775-4463794 | Msa0530390:intron | 55.0% | |
| GTAACCACACTTTCAGGGGG+AGG | + | chr4_1:4463782-4463801 | None:intergenic | 55.0% | |
| GCGAAGATCGAGCCATGAAC+TGG | - | chr4_1:4463936-4463955 | Msa0530390:CDS | 55.0% | |
| TCTACCTCCCCCTGAAAGTG+TGG | - | chr4_1:4463775-4463794 | Msa0530390:intron | 55.0% | |
| GTAACCACACTTTCAGGGGG+AGG | + | chr4_1:4463782-4463801 | None:intergenic | 55.0% | |
| GCGAAGATCGAGCCATGAAC+TGG | - | chr4_1:4463936-4463955 | Msa0530390:CDS | 55.0% | |
| ! | GAGACTGGTTGGGCCTCTCA+TGG | - | chr4_1:4464457-4464476 | Msa0530390:CDS | 60.0% |
| ! | GAGACTGGTTGGGCCTCTCA+TGG | - | chr4_1:4464457-4464476 | Msa0530390:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 4463138 | 4465451 | 4463138 | ID=Msa0530390;Name=Msa0530390 |
| chr4_1 | mRNA | 4463138 | 4465451 | 4463138 | ID=Msa0530390-mRNA-1;Parent=Msa0530390;Name=Msa0530390-mRNA-1;_AED=0.04;_eAED=0.04;_QI=23|0.5|0.66|1|1|1|3|145|390 |
| chr4_1 | exon | 4463138 | 4463401 | 4463138 | ID=Msa0530390-mRNA-1:exon:1358;Parent=Msa0530390-mRNA-1 |
| chr4_1 | exon | 4463910 | 4464875 | 4463910 | ID=Msa0530390-mRNA-1:exon:1357;Parent=Msa0530390-mRNA-1 |
| chr4_1 | exon | 4465341 | 4465451 | 4465341 | ID=Msa0530390-mRNA-1:exon:1356;Parent=Msa0530390-mRNA-1 |
| chr4_1 | five_prime_UTR | 4465429 | 4465451 | 4465429 | ID=Msa0530390-mRNA-1:five_prime_utr;Parent=Msa0530390-mRNA-1 |
| chr4_1 | CDS | 4465341 | 4465428 | 4465341 | ID=Msa0530390-mRNA-1:cds;Parent=Msa0530390-mRNA-1 |
| chr4_1 | CDS | 4463910 | 4464875 | 4463910 | ID=Msa0530390-mRNA-1:cds;Parent=Msa0530390-mRNA-1 |
| chr4_1 | CDS | 4463283 | 4463401 | 4463283 | ID=Msa0530390-mRNA-1:cds;Parent=Msa0530390-mRNA-1 |
| chr4_1 | three_prime_UTR | 4463138 | 4463282 | 4463138 | ID=Msa0530390-mRNA-1:three_prime_utr;Parent=Msa0530390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
