Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0595580 | XP_013455281.3 | 93.896 | 557 | 34 | 0 | 1 | 557 | 1 | 557 | 0.0 | 1047 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0595580 | sp|Q0WP01|PTR9_ARATH | 63.718 | 554 | 189 | 2 | 10 | 556 | 9 | 557 | 0.0 | 688 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0070120 | Msa0595580 | 0.806242 | 9.048162e-50 | -8.615850e-47 |
Msa0139680 | Msa0595580 | 0.808547 | 2.935333e-50 | -8.615850e-47 |
Msa0367860 | Msa0595580 | 0.804550 | 2.046718e-49 | -8.615850e-47 |
Msa0415640 | Msa0595580 | 0.800429 | 1.447471e-48 | -8.615850e-47 |
Msa0441260 | Msa0595580 | 0.801869 | 7.344257e-49 | -8.615850e-47 |
Msa0345050 | Msa0595580 | 0.813403 | 2.605135e-51 | -8.615850e-47 |
Msa0536540 | Msa0595580 | 0.834053 | 3.744435e-56 | -8.615850e-47 |
Msa0592650 | Msa0595580 | 0.814351 | 1.610448e-51 | -8.615850e-47 |
Msa0595580 | Msa0613300 | 0.800743 | 1.248833e-48 | -8.615850e-47 |
Msa0595580 | Msa0709140 | 0.806728 | 7.143969e-50 | -8.615850e-47 |
Msa0595580 | Msa0725580 | 0.828321 | 9.594070e-55 | -8.615850e-47 |
Msa0595580 | Msa0766170 | 0.811867 | 5.648216e-51 | -8.615850e-47 |
Msa0595580 | Msa0882780 | 0.808746 | 2.661411e-50 | -8.615850e-47 |
Msa0595580 | Msa1092310 | 0.804181 | 2.443369e-49 | -8.615850e-47 |
Msa0595580 | Msa1114670 | 0.804906 | 1.724869e-49 | -8.615850e-47 |
Msa0595580 | Msa1136760 | 0.833361 | 5.573746e-56 | -8.615850e-47 |
Msa0595580 | Msa1159170 | 0.801270 | 9.747975e-49 | -8.615850e-47 |
Msa0595580 | Msa1307530 | 0.809045 | 2.297744e-50 | -8.615850e-47 |
Msa0595580 | Msa1362850 | 0.824373 | 8.358719e-54 | -8.615850e-47 |
Msa0595580 | Msa1398140 | 0.818469 | 1.928444e-52 | -8.615850e-47 |
Msa0595580 | Msa1455200 | 0.809106 | 2.229189e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0595580 | MtrunA17_Chr4g0014801 | 93.896 | 557 | 34 | 0 | 1 | 557 | 1 | 557 | 0.0 | 1047 |
Msa0595580 | MtrunA17_Chr4g0014781 | 89.767 | 557 | 57 | 0 | 1 | 557 | 1 | 557 | 0.0 | 1015 |
Msa0595580 | MtrunA17_Chr4g0014871 | 84.973 | 559 | 82 | 2 | 1 | 557 | 1 | 559 | 0.0 | 989 |
Msa0595580 | MtrunA17_Chr4g0014841 | 86.894 | 557 | 71 | 1 | 1 | 557 | 1 | 555 | 0.0 | 974 |
Msa0595580 | MtrunA17_Chr4g0014791 | 86.201 | 558 | 73 | 2 | 1 | 557 | 1 | 555 | 0.0 | 973 |
Msa0595580 | MtrunA17_Chr4g0014861 | 85.151 | 431 | 63 | 1 | 125 | 554 | 1 | 431 | 0.0 | 768 |
Msa0595580 | MtrunA17_Chr3g0077151 | 66.972 | 545 | 169 | 5 | 13 | 555 | 12 | 547 | 0.0 | 720 |
Msa0595580 | MtrunA17_Chr8g0353031 | 47.243 | 544 | 255 | 7 | 30 | 552 | 19 | 551 | 3.54e-164 | 479 |
Msa0595580 | MtrunA17_Chr8g0375311 | 42.096 | 563 | 298 | 8 | 10 | 548 | 21 | 579 | 6.48e-159 | 466 |
Msa0595580 | MtrunA17_Chr7g0241741 | 40.459 | 566 | 312 | 6 | 8 | 552 | 1 | 562 | 1.05e-155 | 457 |
Msa0595580 | MtrunA17_Chr8g0375291 | 43.088 | 557 | 289 | 8 | 10 | 542 | 21 | 573 | 2.11e-155 | 457 |
Msa0595580 | MtrunA17_Chr7g0261811 | 41.103 | 562 | 307 | 6 | 17 | 557 | 15 | 573 | 9.73e-154 | 453 |
Msa0595580 | MtrunA17_Chr4g0005901 | 40.780 | 564 | 309 | 7 | 10 | 552 | 13 | 572 | 4.36e-152 | 448 |
Msa0595580 | MtrunA17_Chr7g0261791 | 40.575 | 557 | 306 | 6 | 17 | 551 | 17 | 570 | 1.59e-151 | 447 |
Msa0595580 | MtrunA17_Chr3g0104011 | 41.343 | 566 | 305 | 8 | 10 | 552 | 3 | 564 | 4.87e-150 | 442 |
Msa0595580 | MtrunA17_Chr3g0114501 | 40.323 | 558 | 312 | 7 | 17 | 555 | 10 | 565 | 4.13e-149 | 441 |
Msa0595580 | MtrunA17_Chr3g0112671 | 39.502 | 562 | 305 | 8 | 10 | 551 | 14 | 560 | 6.78e-149 | 440 |
Msa0595580 | MtrunA17_Chr8g0375351 | 41.071 | 560 | 302 | 8 | 17 | 552 | 28 | 583 | 2.11e-148 | 439 |
Msa0595580 | MtrunA17_Chr3g0112611 | 39.515 | 577 | 318 | 8 | 3 | 557 | 11 | 578 | 2.28e-147 | 437 |
Msa0595580 | MtrunA17_Chr1g0166791 | 40.934 | 557 | 303 | 8 | 17 | 551 | 12 | 564 | 2.86e-147 | 436 |
Msa0595580 | MtrunA17_Chr4g0008651 | 39.497 | 557 | 308 | 8 | 17 | 552 | 22 | 570 | 3.92e-147 | 436 |
Msa0595580 | MtrunA17_Chr8g0375341 | 40.468 | 556 | 303 | 8 | 17 | 548 | 28 | 579 | 5.86e-146 | 432 |
Msa0595580 | MtrunA17_Chr7g0261881 | 38.434 | 562 | 322 | 6 | 17 | 557 | 15 | 573 | 1.13e-144 | 430 |
Msa0595580 | MtrunA17_Chr7g0240381 | 39.209 | 556 | 305 | 7 | 17 | 552 | 17 | 559 | 2.25e-144 | 429 |
Msa0595580 | MtrunA17_Chr8g0375361 | 41.084 | 572 | 309 | 8 | 1 | 548 | 11 | 578 | 2.34e-144 | 429 |
Msa0595580 | MtrunA17_Chr8g0375321 | 39.388 | 556 | 309 | 7 | 17 | 548 | 25 | 576 | 3.40e-142 | 423 |
Msa0595580 | MtrunA17_Chr7g0261771 | 39.029 | 556 | 315 | 7 | 17 | 551 | 19 | 571 | 2.50e-141 | 421 |
Msa0595580 | MtrunA17_Chr8g0375331 | 39.510 | 572 | 313 | 9 | 1 | 548 | 1 | 563 | 8.60e-141 | 419 |
Msa0595580 | MtrunA17_Chr1g0166711 | 40.288 | 556 | 307 | 8 | 17 | 551 | 13 | 564 | 1.20e-140 | 419 |
Msa0595580 | MtrunA17_Chr1g0187241 | 38.779 | 557 | 315 | 7 | 17 | 551 | 14 | 566 | 5.99e-140 | 417 |
Msa0595580 | MtrunA17_Chr1g0166741 | 38.734 | 537 | 296 | 8 | 17 | 531 | 15 | 540 | 1.19e-134 | 404 |
Msa0595580 | MtrunA17_Chr7g0261851 | 36.691 | 556 | 328 | 6 | 17 | 551 | 16 | 568 | 8.06e-129 | 389 |
Msa0595580 | MtrunA17_Chr1g0166771 | 40.117 | 511 | 269 | 8 | 48 | 534 | 10 | 507 | 2.19e-128 | 386 |
Msa0595580 | MtrunA17_Chr5g0399061 | 38.489 | 569 | 319 | 8 | 12 | 553 | 10 | 574 | 1.37e-125 | 380 |
Msa0595580 | MtrunA17_Chr3g0082631 | 42.581 | 465 | 233 | 8 | 111 | 553 | 9 | 461 | 4.58e-125 | 375 |
Msa0595580 | MtrunA17_Chr5g0422881 | 38.294 | 551 | 308 | 9 | 29 | 552 | 20 | 565 | 5.61e-125 | 379 |
Msa0595580 | MtrunA17_Chr3g0142101 | 38.462 | 559 | 309 | 11 | 9 | 545 | 15 | 560 | 1.38e-124 | 378 |
Msa0595580 | MtrunA17_Chr4g0056431 | 38.169 | 579 | 318 | 8 | 8 | 553 | 4 | 575 | 8.14e-122 | 371 |
Msa0595580 | MtrunA17_Chr5g0399071 | 38.811 | 572 | 313 | 9 | 12 | 553 | 8 | 572 | 3.73e-121 | 369 |
Msa0595580 | MtrunA17_Chr6g0451841 | 38.290 | 538 | 308 | 9 | 36 | 557 | 12 | 541 | 8.90e-120 | 364 |
Msa0595580 | MtrunA17_Chr7g0255621 | 37.004 | 554 | 312 | 10 | 29 | 553 | 20 | 565 | 4.48e-119 | 364 |
Msa0595580 | MtrunA17_Chr7g0255611 | 36.140 | 570 | 323 | 12 | 1 | 541 | 7 | 564 | 1.34e-117 | 360 |
Msa0595580 | MtrunA17_Chr7g0217461 | 36.953 | 571 | 325 | 11 | 10 | 550 | 5 | 570 | 9.82e-116 | 355 |
Msa0595580 | MtrunA17_Chr7g0255601 | 35.253 | 573 | 340 | 9 | 9 | 554 | 7 | 575 | 1.14e-114 | 353 |
Msa0595580 | MtrunA17_Chr7g0214461 | 34.168 | 559 | 330 | 11 | 23 | 557 | 72 | 616 | 1.72e-111 | 345 |
Msa0595580 | MtrunA17_Chr3g0142091 | 36.266 | 557 | 320 | 10 | 15 | 548 | 12 | 556 | 2.44e-109 | 338 |
Msa0595580 | MtrunA17_Chr5g0400371 | 34.722 | 576 | 340 | 10 | 3 | 548 | 86 | 655 | 8.50e-109 | 340 |
Msa0595580 | MtrunA17_Chr4g0063591 | 38.949 | 552 | 308 | 8 | 16 | 545 | 9 | 553 | 3.79e-108 | 335 |
Msa0595580 | MtrunA17_Chr5g0415791 | 34.829 | 557 | 321 | 9 | 29 | 551 | 29 | 577 | 1.01e-107 | 335 |
Msa0595580 | MtrunA17_Chr4g0054891 | 34.921 | 567 | 328 | 11 | 10 | 546 | 91 | 646 | 1.02e-106 | 334 |
Msa0595580 | MtrunA17_Chr1g0166731 | 39.035 | 456 | 253 | 8 | 116 | 550 | 9 | 460 | 7.23e-106 | 326 |
Msa0595580 | MtrunA17_Chr1g0213711 | 34.483 | 551 | 317 | 11 | 27 | 548 | 19 | 554 | 1.44e-105 | 329 |
Msa0595580 | MtrunA17_Chr7g0261661 | 36.900 | 458 | 261 | 6 | 117 | 551 | 1 | 453 | 4.03e-104 | 322 |
Msa0595580 | MtrunA17_Chr5g0415961 | 33.737 | 578 | 343 | 9 | 11 | 555 | 6 | 576 | 6.74e-104 | 324 |
Msa0595580 | MtrunA17_Chr7g0261751 | 36.611 | 478 | 244 | 5 | 17 | 437 | 19 | 494 | 2.45e-103 | 321 |
Msa0595580 | MtrunA17_Chr4g0059971 | 35.401 | 548 | 322 | 9 | 35 | 552 | 40 | 585 | 3.58e-103 | 323 |
Msa0595580 | MtrunA17_Chr8g0362711 | 34.676 | 571 | 332 | 8 | 18 | 555 | 13 | 575 | 6.16e-101 | 317 |
Msa0595580 | MtrunA17_Chr7g0218851 | 32.358 | 581 | 341 | 13 | 12 | 557 | 29 | 592 | 8.07e-101 | 317 |
Msa0595580 | MtrunA17_Chr2g0284701 | 32.542 | 590 | 361 | 9 | 2 | 555 | 4 | 592 | 9.63e-101 | 317 |
Msa0595580 | MtrunA17_Chr3g0133341 | 34.182 | 550 | 330 | 9 | 25 | 551 | 10 | 550 | 7.57e-100 | 313 |
Msa0595580 | MtrunA17_Chr2g0276751 | 34.220 | 564 | 340 | 9 | 10 | 556 | 19 | 568 | 8.57e-100 | 314 |
Msa0595580 | MtrunA17_Chr8g0362781 | 32.624 | 564 | 337 | 8 | 23 | 550 | 24 | 580 | 7.82e-99 | 311 |
Msa0595580 | MtrunA17_Chr8g0390331 | 34.239 | 552 | 330 | 11 | 23 | 548 | 9 | 553 | 8.94e-99 | 311 |
Msa0595580 | MtrunA17_Chr4g0059991 | 34.004 | 547 | 328 | 9 | 35 | 550 | 28 | 572 | 3.77e-98 | 310 |
Msa0595580 | MtrunA17_Chr5g0439381 | 36.201 | 558 | 316 | 9 | 17 | 551 | 16 | 556 | 6.28e-98 | 309 |
Msa0595580 | MtrunA17_Chr4g0011041 | 32.504 | 563 | 341 | 9 | 17 | 548 | 24 | 578 | 1.70e-96 | 305 |
Msa0595580 | MtrunA17_Chr1g0157611 | 33.748 | 563 | 334 | 10 | 16 | 548 | 1 | 554 | 3.18e-96 | 304 |
Msa0595580 | MtrunA17_Chr7g0214731 | 32.079 | 558 | 340 | 10 | 30 | 553 | 62 | 614 | 7.90e-96 | 305 |
Msa0595580 | MtrunA17_Chr1g0157601 | 33.155 | 561 | 339 | 12 | 16 | 548 | 1 | 553 | 1.89e-94 | 299 |
Msa0595580 | MtrunA17_Chr8g0379971 | 32.258 | 589 | 350 | 10 | 15 | 554 | 6 | 594 | 6.52e-94 | 299 |
Msa0595580 | MtrunA17_Chr4g0059981 | 33.618 | 586 | 346 | 11 | 3 | 557 | 14 | 587 | 3.13e-93 | 297 |
Msa0595580 | MtrunA17_Chr1g0147631 | 32.574 | 571 | 343 | 12 | 4 | 548 | 10 | 564 | 1.14e-92 | 295 |
Msa0595580 | MtrunA17_Chr4g0060001 | 32.496 | 557 | 341 | 8 | 25 | 553 | 25 | 574 | 1.94e-92 | 295 |
Msa0595580 | MtrunA17_Chr2g0331521 | 31.844 | 537 | 332 | 10 | 40 | 548 | 33 | 563 | 6.35e-90 | 288 |
Msa0595580 | MtrunA17_Chr1g0157621 | 33.142 | 522 | 315 | 9 | 53 | 548 | 4 | 517 | 4.37e-89 | 285 |
Msa0595580 | MtrunA17_Chr4g0069581 | 35.318 | 487 | 282 | 11 | 87 | 552 | 44 | 518 | 2.95e-88 | 283 |
Msa0595580 | MtrunA17_Chr2g0331471 | 33.798 | 574 | 335 | 16 | 10 | 550 | 68 | 629 | 4.46e-88 | 286 |
Msa0595580 | MtrunA17_Chr4g0003761 | 32.609 | 552 | 337 | 12 | 25 | 550 | 27 | 569 | 5.90e-88 | 283 |
Msa0595580 | MtrunA17_Chr7g0240271 | 30.265 | 565 | 354 | 9 | 17 | 549 | 12 | 568 | 1.71e-87 | 282 |
Msa0595580 | MtrunA17_Chr4g0011471 | 31.818 | 528 | 323 | 9 | 50 | 548 | 37 | 556 | 2.81e-87 | 281 |
Msa0595580 | MtrunA17_Chr1g0193391 | 31.475 | 556 | 352 | 11 | 17 | 553 | 3 | 548 | 4.47e-87 | 281 |
Msa0595580 | MtrunA17_Chr2g0331481 | 31.818 | 572 | 350 | 13 | 10 | 550 | 4 | 566 | 1.26e-86 | 281 |
Msa0595580 | MtrunA17_Chr7g0271221 | 32.472 | 542 | 339 | 10 | 29 | 553 | 17 | 548 | 1.61e-85 | 276 |
Msa0595580 | MtrunA17_Chr2g0331511 | 30.810 | 568 | 355 | 12 | 10 | 548 | 4 | 562 | 3.98e-85 | 276 |
Msa0595580 | MtrunA17_Chr8g0379991 | 33.808 | 562 | 308 | 11 | 58 | 556 | 9 | 569 | 6.31e-83 | 269 |
Msa0595580 | MtrunA17_Chr1g0177591 | 31.760 | 551 | 337 | 16 | 19 | 550 | 34 | 564 | 1.31e-82 | 268 |
Msa0595580 | MtrunA17_Chr8g0362801 | 34.483 | 464 | 268 | 8 | 119 | 551 | 3 | 461 | 2.78e-81 | 262 |
Msa0595580 | MtrunA17_Chr7g0261731 | 40.361 | 332 | 175 | 4 | 17 | 327 | 19 | 348 | 1.14e-80 | 257 |
Msa0595580 | MtrunA17_Chr2g0331461 | 31.469 | 572 | 352 | 14 | 10 | 550 | 4 | 566 | 1.20e-80 | 265 |
Msa0595580 | MtrunA17_Chr7g0240281 | 30.986 | 568 | 346 | 10 | 27 | 556 | 22 | 581 | 5.50e-79 | 259 |
Msa0595580 | MtrunA17_Chr3g0112631 | 41.852 | 270 | 151 | 3 | 287 | 551 | 4 | 272 | 9.15e-75 | 239 |
Msa0595580 | MtrunA17_Chr5g0415841 | 32.102 | 433 | 268 | 6 | 137 | 551 | 35 | 459 | 1.99e-72 | 239 |
Msa0595580 | MtrunA17_Chr2g0326211 | 31.818 | 572 | 331 | 14 | 16 | 552 | 1 | 548 | 4.13e-72 | 240 |
Msa0595580 | MtrunA17_Chr2g0325951 | 30.473 | 571 | 340 | 13 | 16 | 552 | 1 | 548 | 4.35e-71 | 237 |
Msa0595580 | MtrunA17_Chr2g0325961 | 30.716 | 573 | 337 | 14 | 16 | 552 | 1 | 549 | 8.76e-69 | 231 |
Msa0595580 | MtrunA17_Chr7g0235521 | 31.320 | 447 | 275 | 8 | 127 | 549 | 19 | 457 | 1.89e-66 | 223 |
Msa0595580 | MtrunA17_Chr1g0177611 | 31.347 | 453 | 274 | 15 | 117 | 550 | 1 | 435 | 4.90e-66 | 221 |
Msa0595580 | MtrunA17_Chr7g0240131 | 31.096 | 447 | 276 | 8 | 127 | 549 | 19 | 457 | 2.77e-65 | 220 |
Msa0595580 | MtrunA17_Chr7g0240181 | 31.096 | 447 | 276 | 8 | 127 | 549 | 19 | 457 | 3.45e-65 | 220 |
Msa0595580 | MtrunA17_Chr7g0240211 | 31.096 | 447 | 276 | 8 | 127 | 549 | 19 | 457 | 4.34e-65 | 219 |
Msa0595580 | MtrunA17_Chr1g0177631 | 30.820 | 451 | 277 | 14 | 117 | 548 | 1 | 435 | 3.03e-63 | 214 |
Msa0595580 | MtrunA17_Chr4g0014851 | 82.759 | 116 | 19 | 1 | 1 | 115 | 1 | 116 | 4.27e-61 | 199 |
Msa0595580 | MtrunA17_Chr3g0142111 | 38.538 | 301 | 165 | 5 | 9 | 291 | 26 | 324 | 3.64e-60 | 202 |
Msa0595580 | MtrunA17_Chr4g0060071 | 38.745 | 271 | 161 | 4 | 282 | 551 | 32 | 298 | 4.34e-60 | 201 |
Msa0595580 | MtrunA17_Chr7g0240151 | 29.018 | 448 | 266 | 8 | 127 | 549 | 19 | 439 | 1.80e-59 | 204 |
Msa0595580 | MtrunA17_Chr3g0142121 | 38.314 | 261 | 149 | 4 | 287 | 545 | 12 | 262 | 6.43e-55 | 187 |
Msa0595580 | MtrunA17_Chr7g0234181 | 30.266 | 413 | 265 | 6 | 137 | 548 | 23 | 413 | 2.71e-51 | 181 |
Msa0595580 | MtrunA17_Chr7g0234151 | 29.385 | 439 | 281 | 8 | 116 | 548 | 3 | 418 | 1.06e-50 | 179 |
Msa0595580 | MtrunA17_Chr7g0234381 | 29.452 | 438 | 282 | 8 | 116 | 548 | 3 | 418 | 1.18e-49 | 177 |
Msa0595580 | MtrunA17_Chr7g0261721 | 38.500 | 200 | 122 | 1 | 352 | 551 | 3 | 201 | 9.41e-47 | 163 |
Msa0595580 | MtrunA17_Chr3g0112651 | 38.961 | 154 | 83 | 3 | 116 | 261 | 21 | 171 | 7.68e-31 | 119 |
Msa0595580 | MtrunA17_Chr3g0112661 | 44.068 | 118 | 65 | 1 | 15 | 132 | 17 | 133 | 1.08e-29 | 114 |
Msa0595580 | MtrunA17_Chr1g0166721 | 49.495 | 99 | 50 | 0 | 17 | 115 | 13 | 111 | 1.19e-27 | 108 |
Msa0595580 | MtrunA17_Chr7g0261671 | 45.455 | 99 | 54 | 0 | 17 | 115 | 20 | 118 | 1.02e-25 | 102 |
Msa0595580 | MtrunA17_Chr1g0147591 | 29.798 | 198 | 123 | 7 | 141 | 324 | 3 | 198 | 1.87e-24 | 101 |
Msa0595580 | MtrunA17_Chr2g0326221 | 26.360 | 239 | 146 | 3 | 313 | 551 | 15 | 223 | 9.34e-20 | 88.6 |
Msa0595580 | MtrunA17_Chr3g0082621 | 51.389 | 72 | 35 | 0 | 44 | 115 | 1 | 72 | 3.89e-19 | 82.4 |
Msa0595580 | MtrunA17_Chr4g0060061 | 34.211 | 114 | 74 | 1 | 137 | 249 | 15 | 128 | 1.38e-18 | 82.4 |
Msa0595580 | MtrunA17_Chr7g0261831 | 30.726 | 179 | 97 | 5 | 251 | 407 | 3 | 176 | 1.70e-17 | 81.6 |
Msa0595580 | MtrunA17_Chr1g0147581 | 36.283 | 113 | 64 | 2 | 414 | 525 | 11 | 116 | 1.98e-15 | 72.8 |
Msa0595580 | MtrunA17_Chr7g0240221 | 27.273 | 99 | 72 | 0 | 17 | 115 | 15 | 113 | 3.64e-12 | 63.5 |
Msa0595580 | MtrunA17_Chr7g0240191 | 27.273 | 99 | 72 | 0 | 17 | 115 | 15 | 113 | 3.64e-12 | 63.5 |
Msa0595580 | MtrunA17_Chr7g0240161 | 27.273 | 99 | 72 | 0 | 17 | 115 | 15 | 113 | 3.64e-12 | 63.5 |
Msa0595580 | MtrunA17_Chr4g0060051 | 32.039 | 103 | 70 | 0 | 10 | 112 | 3 | 105 | 6.70e-12 | 63.2 |
Msa0595580 | MtrunA17_Chr7g0261821 | 42.857 | 63 | 36 | 0 | 489 | 551 | 1 | 63 | 1.42e-11 | 60.1 |
Msa0595580 | MtrunA17_Chr7g0240141 | 26.263 | 99 | 73 | 0 | 17 | 115 | 15 | 113 | 1.43e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0595580 | AT1G22540.1 | 63.718 | 554 | 189 | 2 | 10 | 556 | 9 | 557 | 0.0 | 688 |
Msa0595580 | AT1G72125.1 | 57.245 | 559 | 230 | 6 | 1 | 552 | 1 | 557 | 0.0 | 620 |
Msa0595580 | AT1G72120.1 | 57.321 | 560 | 224 | 8 | 1 | 552 | 1 | 553 | 0.0 | 610 |
Msa0595580 | AT1G22550.1 | 55.594 | 572 | 220 | 7 | 1 | 552 | 3 | 560 | 0.0 | 602 |
Msa0595580 | AT1G72140.1 | 56.000 | 550 | 212 | 5 | 16 | 551 | 19 | 552 | 0.0 | 602 |
Msa0595580 | AT1G22570.1 | 55.415 | 554 | 223 | 6 | 16 | 552 | 15 | 561 | 0.0 | 582 |
Msa0595580 | AT1G22570.2 | 55.114 | 528 | 213 | 6 | 42 | 552 | 4 | 524 | 0.0 | 549 |
Msa0595580 | AT1G72130.1 | 53.296 | 531 | 228 | 5 | 29 | 555 | 23 | 537 | 0.0 | 533 |
Msa0595580 | AT3G54450.1 | 43.750 | 544 | 276 | 7 | 29 | 552 | 10 | 543 | 3.92e-168 | 489 |
Msa0595580 | AT2G02040.1 | 41.259 | 572 | 308 | 9 | 1 | 548 | 11 | 578 | 2.23e-152 | 449 |
Msa0595580 | AT5G01180.2 | 40.860 | 558 | 304 | 7 | 17 | 552 | 11 | 564 | 8.50e-151 | 445 |
Msa0595580 | AT5G01180.3 | 40.860 | 558 | 304 | 7 | 17 | 552 | 11 | 564 | 8.50e-151 | 445 |
Msa0595580 | AT5G01180.1 | 40.860 | 558 | 304 | 7 | 17 | 552 | 11 | 564 | 8.50e-151 | 445 |
Msa0595580 | AT3G54140.1 | 40.636 | 566 | 309 | 8 | 10 | 552 | 3 | 564 | 1.51e-150 | 444 |
Msa0595580 | AT3G54140.2 | 40.636 | 566 | 309 | 8 | 10 | 552 | 3 | 564 | 1.51e-150 | 444 |
Msa0595580 | AT1G72130.2 | 52.113 | 426 | 185 | 4 | 133 | 555 | 10 | 419 | 3.88e-147 | 430 |
Msa0595580 | AT1G72130.3 | 52.113 | 426 | 185 | 4 | 133 | 555 | 10 | 419 | 3.88e-147 | 430 |
Msa0595580 | AT1G62200.1 | 41.123 | 552 | 286 | 7 | 17 | 541 | 38 | 577 | 9.76e-146 | 432 |
Msa0595580 | AT3G53960.1 | 39.724 | 579 | 312 | 10 | 3 | 551 | 2 | 573 | 1.05e-145 | 433 |
Msa0595580 | AT2G37900.1 | 41.093 | 567 | 292 | 11 | 10 | 551 | 17 | 566 | 2.87e-144 | 428 |
Msa0595580 | AT2G40460.1 | 39.502 | 562 | 319 | 6 | 11 | 556 | 4 | 560 | 3.74e-140 | 418 |
Msa0595580 | AT1G62200.2 | 39.243 | 581 | 285 | 8 | 17 | 541 | 38 | 606 | 1.81e-139 | 417 |
Msa0595580 | AT1G62200.3 | 39.243 | 581 | 285 | 8 | 17 | 541 | 52 | 620 | 2.49e-139 | 417 |
Msa0595580 | AT2G02020.1 | 40.642 | 561 | 292 | 10 | 3 | 552 | 14 | 544 | 7.12e-139 | 414 |
Msa0595580 | AT5G46050.1 | 38.283 | 559 | 322 | 6 | 17 | 555 | 13 | 568 | 2.34e-132 | 398 |
Msa0595580 | AT5G46040.1 | 37.757 | 535 | 310 | 5 | 17 | 531 | 13 | 544 | 1.82e-131 | 396 |
Msa0595580 | AT2G02020.2 | 39.464 | 560 | 279 | 12 | 3 | 552 | 14 | 523 | 4.26e-124 | 375 |
Msa0595580 | AT2G37900.2 | 40.481 | 499 | 263 | 9 | 74 | 551 | 2 | 487 | 4.67e-124 | 374 |
Msa0595580 | AT5G14940.1 | 39.227 | 543 | 298 | 10 | 29 | 548 | 5 | 538 | 8.13e-124 | 375 |
Msa0595580 | AT1G69870.1 | 38.087 | 554 | 306 | 10 | 28 | 551 | 48 | 594 | 9.48e-119 | 364 |
Msa0595580 | AT3G01350.1 | 37.963 | 540 | 307 | 9 | 33 | 546 | 9 | 546 | 1.84e-118 | 362 |
Msa0595580 | AT1G68570.1 | 38.930 | 542 | 296 | 7 | 40 | 551 | 32 | 568 | 3.88e-118 | 362 |
Msa0595580 | AT1G68570.2 | 38.920 | 537 | 293 | 7 | 45 | 551 | 7 | 538 | 1.03e-117 | 360 |
Msa0595580 | AT1G32450.1 | 34.501 | 571 | 337 | 8 | 10 | 548 | 16 | 581 | 8.76e-111 | 343 |
Msa0595580 | AT2G26690.1 | 37.726 | 554 | 311 | 9 | 16 | 545 | 9 | 552 | 2.96e-110 | 341 |
Msa0595580 | AT1G12110.1 | 35.223 | 582 | 329 | 11 | 3 | 553 | 7 | 571 | 1.30e-108 | 337 |
Msa0595580 | AT4G21680.1 | 35.764 | 576 | 335 | 13 | 5 | 550 | 2 | 572 | 1.36e-107 | 334 |
Msa0595580 | AT1G18880.1 | 34.775 | 555 | 313 | 12 | 35 | 551 | 23 | 566 | 7.67e-101 | 317 |
Msa0595580 | AT3G21670.1 | 36.786 | 560 | 313 | 11 | 17 | 551 | 15 | 558 | 1.14e-100 | 317 |
Msa0595580 | AT1G52190.1 | 33.824 | 544 | 318 | 10 | 40 | 548 | 30 | 566 | 3.10e-100 | 316 |
Msa0595580 | AT2G26690.2 | 37.002 | 527 | 298 | 9 | 43 | 545 | 3 | 519 | 9.02e-100 | 313 |
Msa0595580 | AT5G46050.2 | 37.199 | 457 | 264 | 6 | 119 | 555 | 3 | 456 | 1.03e-98 | 308 |
Msa0595580 | AT1G33440.1 | 34.495 | 574 | 338 | 10 | 7 | 555 | 14 | 574 | 5.26e-98 | 310 |
Msa0595580 | AT1G59740.1 | 33.627 | 568 | 339 | 10 | 17 | 557 | 27 | 583 | 8.35e-98 | 309 |
Msa0595580 | AT3G16180.1 | 33.989 | 559 | 325 | 12 | 25 | 548 | 16 | 565 | 1.41e-97 | 308 |
Msa0595580 | AT1G27040.1 | 32.810 | 573 | 357 | 9 | 6 | 557 | 2 | 567 | 2.13e-97 | 307 |
Msa0595580 | AT1G27040.2 | 33.096 | 562 | 348 | 9 | 17 | 557 | 9 | 563 | 8.69e-97 | 305 |
Msa0595580 | AT1G69850.1 | 32.198 | 587 | 356 | 10 | 9 | 557 | 3 | 585 | 1.15e-96 | 306 |
Msa0595580 | AT2G26690.3 | 36.628 | 516 | 293 | 9 | 54 | 545 | 2 | 507 | 5.21e-95 | 300 |
Msa0595580 | AT5G62680.1 | 32.847 | 548 | 335 | 9 | 35 | 551 | 47 | 592 | 5.89e-93 | 297 |
Msa0595580 | AT5G13400.1 | 31.673 | 562 | 350 | 8 | 20 | 550 | 52 | 610 | 6.33e-93 | 297 |
Msa0595580 | AT5G62730.1 | 31.449 | 566 | 359 | 9 | 1 | 550 | 32 | 584 | 9.53e-93 | 296 |
Msa0595580 | AT1G27080.1 | 34.124 | 548 | 317 | 11 | 33 | 551 | 16 | 548 | 1.30e-92 | 295 |
Msa0595580 | AT5G19640.1 | 32.849 | 551 | 307 | 15 | 32 | 548 | 60 | 581 | 1.07e-91 | 293 |
Msa0595580 | AT1G27040.3 | 33.396 | 536 | 329 | 9 | 43 | 557 | 7 | 535 | 3.30e-91 | 290 |
Msa0595580 | AT3G47960.1 | 32.784 | 546 | 336 | 10 | 35 | 551 | 65 | 608 | 3.69e-89 | 288 |
Msa0595580 | AT5G62730.2 | 31.450 | 531 | 341 | 8 | 37 | 551 | 3 | 526 | 1.60e-87 | 280 |
Msa0595580 | AT5G28470.2 | 31.295 | 556 | 344 | 13 | 28 | 554 | 14 | 560 | 4.98e-86 | 277 |
Msa0595580 | AT1G27080.2 | 34.104 | 519 | 298 | 11 | 62 | 551 | 3 | 506 | 2.73e-85 | 275 |
Msa0595580 | AT1G69860.1 | 33.640 | 544 | 316 | 13 | 35 | 550 | 22 | 548 | 1.14e-83 | 271 |
Msa0595580 | AT5G28470.1 | 30.755 | 556 | 345 | 13 | 28 | 554 | 14 | 558 | 2.97e-83 | 270 |
Msa0595580 | AT3G25280.1 | 32.463 | 536 | 329 | 10 | 21 | 548 | 11 | 521 | 6.08e-79 | 258 |
Msa0595580 | AT3G25260.1 | 31.376 | 545 | 335 | 12 | 12 | 548 | 2 | 515 | 1.84e-74 | 246 |
Msa0595580 | AT3G45680.1 | 30.998 | 571 | 336 | 13 | 11 | 552 | 2 | 543 | 9.56e-71 | 237 |
Msa0595580 | AT3G45650.1 | 29.211 | 558 | 352 | 12 | 17 | 552 | 8 | 544 | 1.76e-69 | 234 |
Msa0595580 | AT3G45710.1 | 30.162 | 557 | 322 | 12 | 31 | 552 | 21 | 545 | 6.22e-69 | 232 |
Msa0595580 | AT3G45700.1 | 29.927 | 548 | 326 | 12 | 30 | 550 | 15 | 531 | 4.21e-68 | 230 |
Msa0595580 | AT3G45660.1 | 30.268 | 522 | 311 | 12 | 58 | 552 | 48 | 543 | 4.55e-65 | 222 |
Msa0595580 | AT3G45660.3 | 30.268 | 522 | 311 | 12 | 58 | 552 | 48 | 543 | 4.55e-65 | 222 |
Msa0595580 | AT3G45660.2 | 29.210 | 582 | 351 | 14 | 6 | 552 | 9 | 564 | 1.03e-64 | 221 |
Msa0595580 | AT3G45650.2 | 27.911 | 584 | 352 | 13 | 17 | 552 | 8 | 570 | 9.60e-64 | 219 |
Msa0595580 | AT3G45720.1 | 30.402 | 523 | 301 | 14 | 40 | 530 | 28 | 519 | 6.70e-62 | 213 |
Msa0595580 | AT5G11570.1 | 27.938 | 519 | 300 | 11 | 40 | 548 | 22 | 476 | 3.85e-59 | 204 |
Msa0595580 | AT3G45690.1 | 28.785 | 535 | 296 | 15 | 30 | 540 | 17 | 490 | 2.41e-54 | 192 |
Msa0595580 | AT2G38100.2 | 27.925 | 530 | 314 | 18 | 59 | 557 | 2 | 494 | 6.01e-47 | 172 |
Msa0595580 | AT2G38100.1 | 28.166 | 529 | 314 | 17 | 59 | 557 | 18 | 510 | 2.01e-46 | 171 |
Msa0595580 | AT2G38100.3 | 28.166 | 529 | 314 | 17 | 59 | 557 | 24 | 516 | 2.44e-46 | 171 |
Find 133 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGCTTCAACTTTGGTTTA+TGG | 0.138154 | 4_2:+24746434 | Msa0595580:CDS |
AACCTTGTGTTCAAGCTTTC+GGG | 0.149446 | 4_2:+24745476 | Msa0595580:CDS |
CTTCTAGTTGTGTGCTCTTT+AGG | 0.161484 | 4_2:-24745523 | None:intergenic |
AAACCTGTGAAATAGGATTT+TGG | 0.194400 | 4_2:+24747325 | Msa0595580:three_prime_UTR |
TACTAAGGTTGGTTCCAATT+TGG | 0.200350 | 4_2:+24746414 | Msa0595580:CDS |
CTAGAAGCTCATTCTTTAAT+TGG | 0.203296 | 4_2:+24745539 | Msa0595580:CDS |
GCTACAAGTTTCATCTTCTT+TGG | 0.207090 | 4_2:-24746363 | None:intergenic |
GATAACATTAGTTGGGTTCT+TGG | 0.227701 | 4_2:+24745622 | Msa0595580:CDS |
CCCATGCTTCTTAGTTCATT+TGG | 0.244157 | 4_2:-24746884 | None:intergenic |
TGCTTCTCTTATCTATATAT+TGG | 0.248624 | 4_2:+24744420 | Msa0595580:CDS |
CTTCGCTTCAAACGATAAAA+TGG | 0.249694 | 4_2:+24746546 | Msa0595580:CDS |
ATTAGTTGGGTTCTTGGATT+TGG | 0.259493 | 4_2:+24745628 | Msa0595580:CDS |
ACTAAGGTTGGTTCCAATTT+GGG | 0.262407 | 4_2:+24746415 | Msa0595580:CDS |
GACATATAGGTTTAACATTA+AGG | 0.274752 | 4_2:+24745705 | Msa0595580:CDS |
AAACCTTGTGTTCAAGCTTT+CGG | 0.280299 | 4_2:+24745475 | Msa0595580:CDS |
TCCAATTTGGGCTTCAACTT+TGG | 0.295489 | 4_2:+24746427 | Msa0595580:CDS |
CCATGCTTCTTAGTTCATTT+GGG | 0.297304 | 4_2:-24746883 | None:intergenic |
TTAGGTCCGAATCTGGTTAT+TGG | 0.299083 | 4_2:+24743827 | Msa0595580:CDS |
AAGAAACTTAATTATTGAAT+AGG | 0.299446 | 4_2:+24743714 | Msa0595580:five_prime_UTR |
AGGAAGGAGGGAAGCAGTTC+CGG | 0.311487 | 4_2:-24744341 | None:intergenic |
AAGAGTCCCTTTCTTAGAAT+TGG | 0.315382 | 4_2:+24745736 | Msa0595580:CDS |
AAGCGATAAACCTGTGAAAT+AGG | 0.318045 | 4_2:+24747318 | Msa0595580:three_prime_UTR |
ACCAAAGTTGAAGCCCAAAT+TGG | 0.319490 | 4_2:-24746428 | None:intergenic |
TGTATTATGCATGTGTTTAG+AGG | 0.324312 | 4_2:+24747244 | Msa0595580:three_prime_UTR |
CTGCTAAGAATGTCAATATT+TGG | 0.333018 | 4_2:+24744317 | Msa0595580:CDS |
ACGAATATGTGCTCATAGAT+AGG | 0.336290 | 4_2:-24746590 | None:intergenic |
ATGGAGAGAACAATATTTCC+TGG | 0.340438 | 4_2:+24746506 | Msa0595580:CDS |
GCACTCTATTTGAGTATTGT+TGG | 0.352342 | 4_2:+24746911 | Msa0595580:CDS |
TCATCTTCTTTGGATCCCTT+TGG | 0.353258 | 4_2:-24746353 | None:intergenic |
CTCCATTGAAGTCCCTTGCT+TGG | 0.358040 | 4_2:-24746489 | None:intergenic |
TTGTTGCGGCTATAAGAAAT+TGG | 0.360335 | 4_2:+24745767 | Msa0595580:CDS |
AGGTTTATCGCTTGCAAACT+TGG | 0.364184 | 4_2:-24747308 | None:intergenic |
ATCACAATGCTTCAAAGAAT+TGG | 0.371798 | 4_2:+24746650 | Msa0595580:CDS |
GCTCAATTAGCTATTGTTGA+TGG | 0.372190 | 4_2:+24743775 | Msa0595580:CDS |
TTCAAAATCCGTCGTTGATA+AGG | 0.373915 | 4_2:-24745797 | None:intergenic |
GCGGAGAGGGTATCATATTA+TGG | 0.374011 | 4_2:+24744235 | Msa0595580:CDS |
TGAATTGTTCAGAACTTTGA+AGG | 0.381625 | 4_2:-24745843 | None:intergenic |
CAATTGTTCCGATGAGTATA+TGG | 0.402803 | 4_2:+24746777 | Msa0595580:CDS |
TATTGAATAGGTTTGTTTGA+TGG | 0.413794 | 4_2:+24743726 | Msa0595580:exon |
GCTTCCCTCCTTCCTCTCTC+AGG | 0.416466 | 4_2:+24744349 | Msa0595580:CDS |
CGCAAAGGCACTACCACATA+AGG | 0.427943 | 4_2:+24747124 | Msa0595580:CDS |
AGATCCGCTTGGTTTATCAT+AGG | 0.431139 | 4_2:+24743850 | Msa0595580:CDS |
GTAAAGATGGTCAAGAAAGT+TGG | 0.434086 | 4_2:+24746987 | Msa0595580:CDS |
ATTTGAGTATTGTTGGTGTT+GGG | 0.435093 | 4_2:+24746918 | Msa0595580:CDS |
TGCTTGGAACAAGGACATAT+AGG | 0.439390 | 4_2:+24745692 | Msa0595580:CDS |
CCCGCAGTTAGGTCCGAATC+TGG | 0.446760 | 4_2:+24743820 | Msa0595580:CDS |
TATTTGAGTATTGTTGGTGT+TGG | 0.455265 | 4_2:+24746917 | Msa0595580:CDS |
ATTTGTATAGACGAGCTGTT+TGG | 0.460787 | 4_2:+24747218 | Msa0595580:three_prime_UTR |
TGTCGTAATGATCATTGCTT+TGG | 0.461713 | 4_2:+24745660 | Msa0595580:CDS |
AATTTGATATCATATCTAAC+AGG | 0.464523 | 4_2:+24744268 | Msa0595580:CDS |
ACAAAGGACAGCCCGCAGTT+AGG | 0.470650 | 4_2:+24743809 | Msa0595580:CDS |
ATATACAAGATAACATTAGT+TGG | 0.471533 | 4_2:+24745614 | Msa0595580:CDS |
ACTGAGGAGAACAATATGTA+AGG | 0.472580 | 4_2:-24745393 | None:intergenic |
GAAGCTCATTCTTTAATTGG+TGG | 0.474451 | 4_2:+24745542 | Msa0595580:CDS |
GACACGACCAATTCTAAGAA+AGG | 0.479274 | 4_2:-24745743 | None:intergenic |
AGCTTCTAACAGCACTTCGT+TGG | 0.483350 | 4_2:-24743755 | None:intergenic |
TTGCTTCTTCCACCTCACTA+AGG | 0.484443 | 4_2:-24746385 | None:intergenic |
AAGAATGTCAATATTTGGTC+CGG | 0.487098 | 4_2:+24744322 | Msa0595580:CDS |
GGATCTCCAATAACCAGATT+CGG | 0.490538 | 4_2:-24743833 | None:intergenic |
GTATCATATTATGGAATTCA+AGG | 0.491184 | 4_2:+24744244 | Msa0595580:CDS |
TATACAAGATAACATTAGTT+GGG | 0.492477 | 4_2:+24745615 | Msa0595580:CDS |
CTCATCGGAACAATTGCATT+GGG | 0.492975 | 4_2:-24746770 | None:intergenic |
TTTACATTCTTCACCAAGCA+AGG | 0.493614 | 4_2:+24746476 | Msa0595580:CDS |
GTTATCACCGGAAAACCATC+AGG | 0.503992 | 4_2:+24746626 | Msa0595580:CDS |
CTTGCTGGATTAAGTGTGGT+GGG | 0.506111 | 4_2:+24747058 | Msa0595580:CDS |
ATTCCAAAATCCTATTTCAC+AGG | 0.506292 | 4_2:-24747328 | None:intergenic |
AGGTGTGGAAGTGGCGGAGA+GGG | 0.511145 | 4_2:+24744222 | Msa0595580:intron |
AATCCTTGGCTATCCTTATG+TGG | 0.520497 | 4_2:-24747137 | None:intergenic |
GTTGCAGTGCTTTGTTTGAG+TGG | 0.521993 | 4_2:-24744292 | None:intergenic |
TGAAAGCACCTGAGAGAGGA+AGG | 0.524878 | 4_2:-24744357 | None:intergenic |
ACACGACCAATTCTAAGAAA+GGG | 0.526584 | 4_2:-24745742 | None:intergenic |
ACTCATCGGAACAATTGCAT+TGG | 0.528928 | 4_2:-24746771 | None:intergenic |
TCCGATGAGTATATGGTGGC+TGG | 0.529133 | 4_2:+24746784 | Msa0595580:CDS |
TCACTCTATCTAGTTGCCAT+TGG | 0.531734 | 4_2:+24745439 | Msa0595580:CDS |
AGCAAAGGCTGTACTAAGGT+TGG | 0.534832 | 4_2:+24746403 | Msa0595580:CDS |
TGAAGCATTGTGATGCCTGA+TGG | 0.537409 | 4_2:-24746641 | None:intergenic |
CCCAAATGAACTAAGAAGCA+TGG | 0.542573 | 4_2:+24746883 | Msa0595580:CDS |
GAGGGAGGTATGTCAAATCC+AGG | 0.544553 | 4_2:-24746524 | None:intergenic |
CTGGTTATTGGAGATCCGCT+TGG | 0.544926 | 4_2:+24743839 | Msa0595580:CDS |
AAGGCATTGCTAACACCAAA+GGG | 0.547881 | 4_2:+24746338 | Msa0595580:CDS |
AATTGGTCGTGTCTTTGTTG+CGG | 0.548642 | 4_2:+24745753 | Msa0595580:CDS |
CGAATATGTGCTCATAGATA+GGG | 0.550106 | 4_2:-24746589 | None:intergenic |
GCTTGCTGGATTAAGTGTGG+TGG | 0.557942 | 4_2:+24747057 | Msa0595580:CDS |
ATGCTTCAAAGAATTGGCAC+TGG | 0.559271 | 4_2:+24746656 | Msa0595580:CDS |
TTTATCGTTTGAAGCGAAGA+GGG | 0.565404 | 4_2:-24746542 | None:intergenic |
GCCCCGAAAGCTTGAACACA+AGG | 0.567096 | 4_2:-24745478 | None:intergenic |
AGCACCTGAGAGAGGAAGGA+GGG | 0.570281 | 4_2:-24744353 | None:intergenic |
CACCAAGCAAGGGACTTCAA+TGG | 0.574912 | 4_2:+24746487 | Msa0595580:CDS |
GGAGAACAATATGTAAGGGA+AGG | 0.577683 | 4_2:-24745388 | None:intergenic |
TTTATGCCCACCTTGTCCAA+TGG | 0.578469 | 4_2:-24745455 | None:intergenic |
CAAGGCATTGCTAACACCAA+AGG | 0.579415 | 4_2:+24746337 | Msa0595580:CDS |
CCAAATGAACTAAGAAGCAT+GGG | 0.579849 | 4_2:+24746884 | Msa0595580:CDS |
AAGAAGCAAAGGCTGTACTA+AGG | 0.584489 | 4_2:+24746399 | Msa0595580:CDS |
GGTGTTGGGAGCTTTCTAAG+TGG | 0.585532 | 4_2:+24746932 | Msa0595580:CDS |
TATCTAGTTGCCATTGGACA+AGG | 0.587068 | 4_2:+24745445 | Msa0595580:CDS |
TATCATATTATGGAATTCAA+GGG | 0.587902 | 4_2:+24744245 | Msa0595580:CDS |
AACTTGTAGCCTTAGTGAGG+TGG | 0.589145 | 4_2:+24746376 | Msa0595580:CDS |
TTGTTTAGGTGTGGAAGTGG+CGG | 0.589530 | 4_2:+24744216 | Msa0595580:intron |
ACTCCAAACAGAAAATATTG+AGG | 0.590882 | 4_2:-24746809 | None:intergenic |
CCGGTGATAACTCTTGCTAG+TGG | 0.591715 | 4_2:-24746614 | None:intergenic |
CCAGATTCGGACCTAACTGC+GGG | 0.591748 | 4_2:-24743820 | None:intergenic |
TAATACAATTTACAGGGACT+AGG | 0.592138 | 4_2:+24745340 | Msa0595580:intron |
GCAATGATCATTACGACACA+AGG | 0.592495 | 4_2:-24745655 | None:intergenic |
CTGAGGAGAACAATATGTAA+GGG | 0.592564 | 4_2:-24745392 | None:intergenic |
TAGTGAGGTGGAAGAAGCAA+AGG | 0.594771 | 4_2:+24746388 | Msa0595580:CDS |
ACCTTGTGTTCAAGCTTTCG+GGG | 0.599219 | 4_2:+24745477 | Msa0595580:CDS |
TTACATTCTTCACCAAGCAA+GGG | 0.604573 | 4_2:+24746477 | Msa0595580:CDS |
CATTGGTAGCTTCCTCAACA+AGG | 0.605267 | 4_2:+24746319 | Msa0595580:intron |
GAGAACAATATGTAAGGGAA+GGG | 0.609361 | 4_2:-24745387 | None:intergenic |
AATAAGATTACTTGTGACTG+AGG | 0.611966 | 4_2:-24745409 | None:intergenic |
GCAATGAAAGCACCTGAGAG+AGG | 0.614510 | 4_2:-24744361 | None:intergenic |
ACCAGCCACCATATACTCAT+CGG | 0.615921 | 4_2:-24746785 | None:intergenic |
GTTGCTTGCTGGATTAAGTG+TGG | 0.616052 | 4_2:+24747054 | Msa0595580:CDS |
TCATACATTTATAATCGCAA+AGG | 0.619210 | 4_2:+24747109 | Msa0595580:CDS |
CTAGTTGCCATTGGACAAGG+TGG | 0.620501 | 4_2:+24745448 | Msa0595580:CDS |
AAGCACCTGAGAGAGGAAGG+AGG | 0.622084 | 4_2:-24744354 | None:intergenic |
GGAGCATATTGTGACGTAGA+CGG | 0.624275 | 4_2:+24747265 | Msa0595580:three_prime_UTR |
GGGCTGTCCTTTGTAATCAA+CGG | 0.635317 | 4_2:-24743800 | None:intergenic |
ACCAGATTCGGACCTAACTG+CGG | 0.636959 | 4_2:-24743821 | None:intergenic |
TAGGTGTGGAAGTGGCGGAG+AGG | 0.640474 | 4_2:+24744221 | Msa0595580:intron |
CCACTAGCAAGAGTTATCAC+CGG | 0.641489 | 4_2:+24746614 | Msa0595580:CDS |
ATCGTTTGAAGCGAAGAGGG+AGG | 0.642861 | 4_2:-24746539 | None:intergenic |
TGAAACTTGTAGCCTTAGTG+AGG | 0.657268 | 4_2:+24746373 | Msa0595580:CDS |
TAGTTGCCATTGGACAAGGT+GGG | 0.664534 | 4_2:+24745449 | Msa0595580:CDS |
CTACCACATAAGGATAGCCA+AGG | 0.666579 | 4_2:+24747134 | Msa0595580:exon |
GATGGCGCCGTTGATTACAA+AGG | 0.673450 | 4_2:+24743793 | Msa0595580:CDS |
GTGTTAGCAATGCCTTGTTG+AGG | 0.678778 | 4_2:-24746331 | None:intergenic |
GCGAAGTACCTTATCAACGA+CGG | 0.682131 | 4_2:+24745789 | Msa0595580:CDS |
CAATGATCATTACGACACAA+GGG | 0.688557 | 4_2:-24745654 | None:intergenic |
TTGTGTTCAAGCTTTCGGGG+CGG | 0.695110 | 4_2:+24745480 | Msa0595580:CDS |
CTAAAGATAGCACAACAACA+CGG | 0.701939 | 4_2:+24746734 | Msa0595580:CDS |
TGTACCTATGATAAACCAAG+CGG | 0.704715 | 4_2:-24743854 | None:intergenic |
TTGTTCCGATGAGTATATGG+TGG | 0.735995 | 4_2:+24746780 | Msa0595580:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTGTTTTTATCATAATAA+AGG | + | chr4_2:24743891-24743910 | Msa0595580:intron | 10.0% |
!!! | TTAATTTTAGGAAAAAATTT+CGG | + | chr4_2:24744527-24744546 | Msa0595580:intron | 10.0% |
!!! | AAATGATTCTAAAATAATTT+TGG | - | chr4_2:24744921-24744940 | None:intergenic | 10.0% |
!!! | AATTTTTATATCAATATTCA+TGG | + | chr4_2:24746679-24746698 | Msa0595580:CDS | 10.0% |
!! | AAGAAACTTAATTATTGAAT+AGG | + | chr4_2:24743714-24743733 | Msa0595580:five_prime_UTR | 15.0% |
!!! | TTTTTATCATAATAAAGGTT+TGG | + | chr4_2:24743896-24743915 | Msa0595580:intron | 15.0% |
!! | AAAGAGATATAAAATTGATT+TGG | - | chr4_2:24744136-24744155 | None:intergenic | 15.0% |
!!! | TCAATTACTTTCTTTTTAAA+TGG | + | chr4_2:24744163-24744182 | Msa0595580:intron | 15.0% |
!!! | TCAATTTTTACACTTTAAAA+TGG | + | chr4_2:24744476-24744495 | Msa0595580:intron | 15.0% |
!! | CTAAAATTAACTATTAACTA+TGG | - | chr4_2:24744517-24744536 | None:intergenic | 15.0% |
!!! | CATAGTTAATAGTTAATTTT+AGG | + | chr4_2:24744515-24744534 | Msa0595580:intron | 15.0% |
!!! | AAACAACTAATTTTGATTAA+TGG | - | chr4_2:24744616-24744635 | None:intergenic | 15.0% |
!! | TGTTATGATTACAATATAAA+AGG | - | chr4_2:24746209-24746228 | None:intergenic | 15.0% |
!!! | GTTTTTTGTTTTTTTATCAA+AGG | + | chr4_2:24747164-24747183 | Msa0595580:three_prime_UTR | 15.0% |
!!! | GAATTATGAATGTTTTGTTT+AGG | + | chr4_2:24744202-24744221 | Msa0595580:intron | 20.0% |
!! | TATCATATTATGGAATTCAA+GGG | + | chr4_2:24744245-24744264 | Msa0595580:CDS | 20.0% |
!! | AATTTGATATCATATCTAAC+AGG | + | chr4_2:24744268-24744287 | Msa0595580:CDS | 20.0% |
!! | ATATACAAGATAACATTAGT+TGG | + | chr4_2:24745614-24745633 | Msa0595580:CDS | 20.0% |
!! | TATACAAGATAACATTAGTT+GGG | + | chr4_2:24745615-24745634 | Msa0595580:CDS | 20.0% |
!!! | CTTTCAGTGTTTTAATTTAT+TGG | - | chr4_2:24746265-24746284 | None:intergenic | 20.0% |
!!! | TCATTGATAGAATATTTTAG+TGG | + | chr4_2:24746965-24746984 | Msa0595580:CDS | 20.0% |
!!! | CACATTTTGATTACTTTTAT+TGG | + | chr4_2:24747032-24747051 | Msa0595580:CDS | 20.0% |
!! | AACAAAAAACAAAAAATCCT+TGG | - | chr4_2:24747154-24747173 | None:intergenic | 20.0% |
!! | TATTGAATAGGTTTGTTTGA+TGG | + | chr4_2:24743726-24743745 | Msa0595580:exon | 25.0% |
!!! | GAGATATAAAATTGATTTGG+TGG | - | chr4_2:24744133-24744152 | None:intergenic | 25.0% |
!!! | TTTTAAATGGTGATGAGAAT+TGG | + | chr4_2:24744176-24744195 | Msa0595580:intron | 25.0% |
! | GTATCATATTATGGAATTCA+AGG | + | chr4_2:24744244-24744263 | Msa0595580:CDS | 25.0% |
! | TGCTTCTCTTATCTATATAT+TGG | + | chr4_2:24744420-24744439 | Msa0595580:CDS | 25.0% |
!!! | TTGGATGAGAACTTTTATTT+TGG | + | chr4_2:24744561-24744580 | Msa0595580:intron | 25.0% |
! | TGTTATATATGTTAAACGTC+TGG | - | chr4_2:24744756-24744775 | None:intergenic | 25.0% |
!! | TTTATACATAGAGACACTTT+TGG | + | chr4_2:24744845-24744864 | Msa0595580:intron | 25.0% |
! | TTGCACAAATAAATTCCAAA+TGG | - | chr4_2:24745149-24745168 | None:intergenic | 25.0% |
! | GTTAGGATATGTAGAATAAA+GGG | - | chr4_2:24745245-24745264 | None:intergenic | 25.0% |
! | TGTTAGGATATGTAGAATAA+AGG | - | chr4_2:24745246-24745265 | None:intergenic | 25.0% |
! | ATAAAGATTAGCAAAAACCA+TGG | - | chr4_2:24745276-24745295 | None:intergenic | 25.0% |
!! | ATTGGCTTAATACAATTTAC+AGG | + | chr4_2:24745333-24745352 | Msa0595580:intron | 25.0% |
! | TTGGCTTAATACAATTTACA+GGG | + | chr4_2:24745334-24745353 | Msa0595580:intron | 25.0% |
! | GACATATAGGTTTAACATTA+AGG | + | chr4_2:24745705-24745724 | Msa0595580:CDS | 25.0% |
! | TAAAGTAATCAACACTTAGA+AGG | - | chr4_2:24745985-24746004 | None:intergenic | 25.0% |
! | ATCTGCTTATTTCAATGTAT+TGG | + | chr4_2:24746065-24746084 | Msa0595580:intron | 25.0% |
! | CATTATTAATGTTTCATCCT+AGG | + | chr4_2:24746107-24746126 | Msa0595580:intron | 25.0% |
! | TGAGAGAAAGATTGATTATT+TGG | + | chr4_2:24746157-24746176 | Msa0595580:intron | 25.0% |
! | AATTTGATTACAATACGTGT+TGG | + | chr4_2:24746180-24746199 | Msa0595580:intron | 25.0% |
!! | TTATTGGAATTAGTTTGAGT+TGG | - | chr4_2:24746249-24746268 | None:intergenic | 25.0% |
!!! | TTAGCTTGTAATTTCAACAT+TGG | + | chr4_2:24746302-24746321 | Msa0595580:intron | 25.0% |
!!! | GAATATTTTAGTGGTAAAGA+TGG | + | chr4_2:24746974-24746993 | Msa0595580:CDS | 25.0% |
!! | GTTTTGTGACAATATCAATA+AGG | + | chr4_2:24747009-24747028 | Msa0595580:CDS | 25.0% |
! | TCATACATTTATAATCGCAA+AGG | + | chr4_2:24747109-24747128 | Msa0595580:CDS | 25.0% |
!! | ACTCTTTGAACCTTTAGTTT+TGG | + | chr4_2:24744023-24744042 | Msa0595580:intron | 30.0% |
CATAGTCAAACCAAAACTAA+AGG | - | chr4_2:24744036-24744055 | None:intergenic | 30.0% | |
GTAAAAAGTTTAGCTAGAGA+GGG | - | chr4_2:24744073-24744092 | None:intergenic | 30.0% | |
AGTAAAAAGTTTAGCTAGAG+AGG | - | chr4_2:24744074-24744093 | None:intergenic | 30.0% | |
!! | ATAAAATTGATTTGGTGGCT+GGG | - | chr4_2:24744128-24744147 | None:intergenic | 30.0% |
!! | TATAAAATTGATTTGGTGGC+TGG | - | chr4_2:24744129-24744148 | None:intergenic | 30.0% |
!!! | ATGAATGTTTTGTTTAGGTG+TGG | + | chr4_2:24744207-24744226 | Msa0595580:intron | 30.0% |
CTGCTAAGAATGTCAATATT+TGG | + | chr4_2:24744317-24744336 | Msa0595580:CDS | 30.0% | |
AAGAATGTCAATATTTGGTC+CGG | + | chr4_2:24744322-24744341 | Msa0595580:CDS | 30.0% | |
!!! | TTCATTGCTGATTCTTTTCT+TGG | + | chr4_2:24744376-24744395 | Msa0595580:CDS | 30.0% |
AGGAAAAAATTTCGGTATCA+TGG | + | chr4_2:24744535-24744554 | Msa0595580:intron | 30.0% | |
GAGAACTTTCTATGTAATTC+TGG | - | chr4_2:24744799-24744818 | None:intergenic | 30.0% | |
! | TCATTTCTTTTATGCTTTCG+TGG | + | chr4_2:24744935-24744954 | Msa0595580:intron | 30.0% |
!! | ACAATCTGAAAGTATCTTGA+AGG | + | chr4_2:24745040-24745059 | Msa0595580:intron | 30.0% |
!! | CAATCTGAAAGTATCTTGAA+GGG | + | chr4_2:24745041-24745060 | Msa0595580:intron | 30.0% |
!! | AATCTGAAAGTATCTTGAAG+GGG | + | chr4_2:24745042-24745061 | Msa0595580:intron | 30.0% |
AATACTGCAAATACTTGAAC+AGG | - | chr4_2:24745194-24745213 | None:intergenic | 30.0% | |
TAATACAATTTACAGGGACT+AGG | + | chr4_2:24745340-24745359 | Msa0595580:intron | 30.0% | |
AATAAGATTACTTGTGACTG+AGG | - | chr4_2:24745412-24745431 | None:intergenic | 30.0% | |
CTAGAAGCTCATTCTTTAAT+TGG | + | chr4_2:24745539-24745558 | Msa0595580:CDS | 30.0% | |
! | TGGTATTTTACTATGATTGC+AGG | + | chr4_2:24745562-24745581 | Msa0595580:CDS | 30.0% |
!!! | TTGTTTTTTTGCTTGGAACA+AGG | + | chr4_2:24745683-24745702 | Msa0595580:CDS | 30.0% |
!! | GATTTTGAAGAAGAATGTGA+TGG | + | chr4_2:24745811-24745830 | Msa0595580:CDS | 30.0% |
TGAATTGTTCAGAACTTTGA+AGG | - | chr4_2:24745846-24745865 | None:intergenic | 30.0% | |
ATCACAATGCTTCAAAGAAT+TGG | + | chr4_2:24746650-24746669 | Msa0595580:CDS | 30.0% | |
! | TAGTCTTTTCATCTCAACAA+AGG | - | chr4_2:24746717-24746736 | None:intergenic | 30.0% |
! | GTTCCTCAATATTTTCTGTT+TGG | + | chr4_2:24746806-24746825 | Msa0595580:CDS | 30.0% |
ACTCCAAACAGAAAATATTG+AGG | - | chr4_2:24746812-24746831 | None:intergenic | 30.0% | |
!!! | AGTTTCTGAGGTTTTTACTA+TGG | + | chr4_2:24746829-24746848 | Msa0595580:CDS | 30.0% |
! | TATTTGAGTATTGTTGGTGT+TGG | + | chr4_2:24746917-24746936 | Msa0595580:CDS | 30.0% |
! | ATTTGAGTATTGTTGGTGTT+GGG | + | chr4_2:24746918-24746937 | Msa0595580:CDS | 30.0% |
TGTATTATGCATGTGTTTAG+AGG | + | chr4_2:24747244-24747263 | Msa0595580:three_prime_UTR | 30.0% | |
! | AAACCTGTGAAATAGGATTT+TGG | + | chr4_2:24747325-24747344 | Msa0595580:three_prime_UTR | 30.0% |
ATTCCAAAATCCTATTTCAC+AGG | - | chr4_2:24747331-24747350 | None:intergenic | 30.0% | |
!! | AGAATTTTCTCAAGTTCTAG+TGG | - | chr4_2:24747354-24747373 | None:intergenic | 30.0% |
GCTCAATTAGCTATTGTTGA+TGG | + | chr4_2:24743775-24743794 | Msa0595580:CDS | 35.0% | |
TGTACCTATGATAAACCAAG+CGG | - | chr4_2:24743857-24743876 | None:intergenic | 35.0% | |
!! | GGTTTGGTTTGATAAAGAGT+TGG | + | chr4_2:24743912-24743931 | Msa0595580:intron | 35.0% |
AATTTCGGTATCATGGAGTT+TGG | + | chr4_2:24744542-24744561 | Msa0595580:intron | 35.0% | |
! | ATACATAGAGACACTTTTGG+AGG | + | chr4_2:24744848-24744867 | Msa0595580:intron | 35.0% |
GATGCAAACTAGATGCAAAT+GGG | - | chr4_2:24745080-24745099 | None:intergenic | 35.0% | |
AGATGCAAACTAGATGCAAA+TGG | - | chr4_2:24745081-24745100 | None:intergenic | 35.0% | |
! | CTAGTTTGCATCTAAACTAG+TGG | + | chr4_2:24745088-24745107 | Msa0595580:intron | 35.0% |
GACGATGAAGAATATGATGA+TGG | - | chr4_2:24745172-24745191 | None:intergenic | 35.0% | |
ACTAGTATGAGATCTTGTCT+CGG | - | chr4_2:24745220-24745239 | None:intergenic | 35.0% | |
!!! | CATGTTTTGATGTTGGTCAT+TGG | + | chr4_2:24745315-24745334 | Msa0595580:intron | 35.0% |
GAGAACAATATGTAAGGGAA+GGG | - | chr4_2:24745390-24745409 | None:intergenic | 35.0% | |
CTGAGGAGAACAATATGTAA+GGG | - | chr4_2:24745395-24745414 | None:intergenic | 35.0% | |
ACTGAGGAGAACAATATGTA+AGG | - | chr4_2:24745396-24745415 | None:intergenic | 35.0% | |
AAACCTTGTGTTCAAGCTTT+CGG | + | chr4_2:24745475-24745494 | Msa0595580:CDS | 35.0% | |
GAAGCTCATTCTTTAATTGG+TGG | + | chr4_2:24745542-24745561 | Msa0595580:CDS | 35.0% | |
GATAACATTAGTTGGGTTCT+TGG | + | chr4_2:24745622-24745641 | Msa0595580:CDS | 35.0% | |
ATTAGTTGGGTTCTTGGATT+TGG | + | chr4_2:24745628-24745647 | Msa0595580:CDS | 35.0% | |
CAATGATCATTACGACACAA+GGG | - | chr4_2:24745657-24745676 | None:intergenic | 35.0% | |
TGTCGTAATGATCATTGCTT+TGG | + | chr4_2:24745660-24745679 | Msa0595580:CDS | 35.0% | |
!!! | GCTTTGGTTGTTTTTTTGCT+TGG | + | chr4_2:24745676-24745695 | Msa0595580:CDS | 35.0% |
AAGAGTCCCTTTCTTAGAAT+TGG | + | chr4_2:24745736-24745755 | Msa0595580:CDS | 35.0% | |
! | ACACGACCAATTCTAAGAAA+GGG | - | chr4_2:24745745-24745764 | None:intergenic | 35.0% |
TTGTTGCGGCTATAAGAAAT+TGG | + | chr4_2:24745767-24745786 | Msa0595580:CDS | 35.0% | |
TTCAAAATCCGTCGTTGATA+AGG | - | chr4_2:24745800-24745819 | None:intergenic | 35.0% | |
! | TTTAGAGCTCAGTTAGTGTT+TGG | + | chr4_2:24746001-24746020 | Msa0595580:intron | 35.0% |
!! | GGAATTAGTTTGAGTTGGTT+AGG | - | chr4_2:24746244-24746263 | None:intergenic | 35.0% |
GCTACAAGTTTCATCTTCTT+TGG | - | chr4_2:24746366-24746385 | None:intergenic | 35.0% | |
! | TACTAAGGTTGGTTCCAATT+TGG | + | chr4_2:24746414-24746433 | Msa0595580:CDS | 35.0% |
! | ACTAAGGTTGGTTCCAATTT+GGG | + | chr4_2:24746415-24746434 | Msa0595580:CDS | 35.0% |
TTTACATTCTTCACCAAGCA+AGG | + | chr4_2:24746476-24746495 | Msa0595580:CDS | 35.0% | |
TTACATTCTTCACCAAGCAA+GGG | + | chr4_2:24746477-24746496 | Msa0595580:CDS | 35.0% | |
ATGGAGAGAACAATATTTCC+TGG | + | chr4_2:24746506-24746525 | Msa0595580:CDS | 35.0% | |
! | TTTATCGTTTGAAGCGAAGA+GGG | - | chr4_2:24746545-24746564 | None:intergenic | 35.0% |
!! | TTTTATCGTTTGAAGCGAAG+AGG | - | chr4_2:24746546-24746565 | None:intergenic | 35.0% |
CTTCGCTTCAAACGATAAAA+TGG | + | chr4_2:24746546-24746565 | Msa0595580:CDS | 35.0% | |
CGAATATGTGCTCATAGATA+GGG | - | chr4_2:24746592-24746611 | None:intergenic | 35.0% | |
ACGAATATGTGCTCATAGAT+AGG | - | chr4_2:24746593-24746612 | None:intergenic | 35.0% | |
CTAAAGATAGCACAACAACA+CGG | + | chr4_2:24746734-24746753 | Msa0595580:CDS | 35.0% | |
CAATTGTTCCGATGAGTATA+TGG | + | chr4_2:24746777-24746796 | Msa0595580:CDS | 35.0% | |
!! | TTTTCTGTTTGGAGTTTCTG+AGG | + | chr4_2:24746817-24746836 | Msa0595580:CDS | 35.0% |
!! | TCTGAGGTTTTTACTATGGT+TGG | + | chr4_2:24746833-24746852 | Msa0595580:CDS | 35.0% |
CCATGCTTCTTAGTTCATTT+GGG | - | chr4_2:24746886-24746905 | None:intergenic | 35.0% | |
! | CCAAATGAACTAAGAAGCAT+GGG | + | chr4_2:24746884-24746903 | Msa0595580:CDS | 35.0% |
! | GCACTCTATTTGAGTATTGT+TGG | + | chr4_2:24746911-24746930 | Msa0595580:CDS | 35.0% |
GTAAAGATGGTCAAGAAAGT+TGG | + | chr4_2:24746987-24747006 | Msa0595580:CDS | 35.0% | |
!! | TACTTTTATTGGTTGCTTGC+TGG | + | chr4_2:24747043-24747062 | Msa0595580:CDS | 35.0% |
ATTTGTATAGACGAGCTGTT+TGG | + | chr4_2:24747218-24747237 | Msa0595580:three_prime_UTR | 35.0% | |
AAGCGATAAACCTGTGAAAT+AGG | + | chr4_2:24747318-24747337 | Msa0595580:three_prime_UTR | 35.0% | |
TTAGGTCCGAATCTGGTTAT+TGG | + | chr4_2:24743827-24743846 | Msa0595580:CDS | 40.0% | |
GGATCTCCAATAACCAGATT+CGG | - | chr4_2:24743836-24743855 | None:intergenic | 40.0% | |
AGATCCGCTTGGTTTATCAT+AGG | + | chr4_2:24743850-24743869 | Msa0595580:CDS | 40.0% | |
CGACATATCATTCGTTAGCA+AGG | - | chr4_2:24743983-24744002 | None:intergenic | 40.0% | |
!!! | GTTTTGTTTAGGTGTGGAAG+TGG | + | chr4_2:24744213-24744232 | Msa0595580:intron | 40.0% |
! | TAAACGTCTGGAATTTGCAC+CGG | - | chr4_2:24744744-24744763 | None:intergenic | 40.0% |
TTGTGTCTTCACACACCATT+TGG | + | chr4_2:24745131-24745150 | Msa0595580:intron | 40.0% | |
CTAGTATGAGATCTTGTCTC+GGG | - | chr4_2:24745219-24745238 | None:intergenic | 40.0% | |
TATCCTAACACTGTCTTCCA+TGG | + | chr4_2:24745256-24745275 | Msa0595580:intron | 40.0% | |
AAACCATGGAAGACAGTGTT+AGG | - | chr4_2:24745262-24745281 | None:intergenic | 40.0% | |
!!! | GTGTGCTCATGTTTTGATGT+TGG | + | chr4_2:24745308-24745327 | Msa0595580:intron | 40.0% |
GGAGAACAATATGTAAGGGA+AGG | - | chr4_2:24745391-24745410 | None:intergenic | 40.0% | |
TCACTCTATCTAGTTGCCAT+TGG | + | chr4_2:24745439-24745458 | Msa0595580:CDS | 40.0% | |
TATCTAGTTGCCATTGGACA+AGG | + | chr4_2:24745445-24745464 | Msa0595580:CDS | 40.0% | |
AACCTTGTGTTCAAGCTTTC+GGG | + | chr4_2:24745476-24745495 | Msa0595580:CDS | 40.0% | |
! | CTTCTAGTTGTGTGCTCTTT+AGG | - | chr4_2:24745526-24745545 | None:intergenic | 40.0% |
GCAATGATCATTACGACACA+AGG | - | chr4_2:24745658-24745677 | None:intergenic | 40.0% | |
TGCTTGGAACAAGGACATAT+AGG | + | chr4_2:24745692-24745711 | Msa0595580:CDS | 40.0% | |
! | GACACGACCAATTCTAAGAA+AGG | - | chr4_2:24745746-24745765 | None:intergenic | 40.0% |
AATTGGTCGTGTCTTTGTTG+CGG | + | chr4_2:24745753-24745772 | Msa0595580:CDS | 40.0% | |
!! | AAGGCATTGCTAACACCAAA+GGG | + | chr4_2:24746338-24746357 | Msa0595580:CDS | 40.0% |
TCATCTTCTTTGGATCCCTT+TGG | - | chr4_2:24746356-24746375 | None:intergenic | 40.0% | |
! | TGAAACTTGTAGCCTTAGTG+AGG | + | chr4_2:24746373-24746392 | Msa0595580:CDS | 40.0% |
AAGAAGCAAAGGCTGTACTA+AGG | + | chr4_2:24746399-24746418 | Msa0595580:CDS | 40.0% | |
TCCAATTTGGGCTTCAACTT+TGG | + | chr4_2:24746427-24746446 | Msa0595580:CDS | 40.0% | |
ACCAAAGTTGAAGCCCAAAT+TGG | - | chr4_2:24746431-24746450 | None:intergenic | 40.0% | |
! | TGGGCTTCAACTTTGGTTTA+TGG | + | chr4_2:24746434-24746453 | Msa0595580:CDS | 40.0% |
ATGCTTCAAAGAATTGGCAC+TGG | + | chr4_2:24746656-24746675 | Msa0595580:CDS | 40.0% | |
CTCATCGGAACAATTGCATT+GGG | - | chr4_2:24746773-24746792 | None:intergenic | 40.0% | |
ACTCATCGGAACAATTGCAT+TGG | - | chr4_2:24746774-24746793 | None:intergenic | 40.0% | |
TTGTTCCGATGAGTATATGG+TGG | + | chr4_2:24746780-24746799 | Msa0595580:CDS | 40.0% | |
CCCAAATGAACTAAGAAGCA+TGG | + | chr4_2:24746883-24746902 | Msa0595580:CDS | 40.0% | |
CCCATGCTTCTTAGTTCATT+TGG | - | chr4_2:24746887-24746906 | None:intergenic | 40.0% | |
AATCCTTGGCTATCCTTATG+TGG | - | chr4_2:24747140-24747159 | None:intergenic | 40.0% | |
AGGTTTATCGCTTGCAAACT+TGG | - | chr4_2:24747311-24747330 | None:intergenic | 40.0% | |
AGCTTCTAACAGCACTTCGT+TGG | - | chr4_2:24743758-24743777 | None:intergenic | 45.0% | |
GGGCTGTCCTTTGTAATCAA+CGG | - | chr4_2:24743803-24743822 | None:intergenic | 45.0% | |
TTGTTTAGGTGTGGAAGTGG+CGG | + | chr4_2:24744216-24744235 | Msa0595580:intron | 45.0% | |
!! | GCGGAGAGGGTATCATATTA+TGG | + | chr4_2:24744235-24744254 | Msa0595580:CDS | 45.0% |
!! | GTTGCAGTGCTTTGTTTGAG+TGG | - | chr4_2:24744295-24744314 | None:intergenic | 45.0% |
TAGTTGCCATTGGACAAGGT+GGG | + | chr4_2:24745449-24745468 | Msa0595580:CDS | 45.0% | |
TTTATGCCCACCTTGTCCAA+TGG | - | chr4_2:24745458-24745477 | None:intergenic | 45.0% | |
ACCTTGTGTTCAAGCTTTCG+GGG | + | chr4_2:24745477-24745496 | Msa0595580:CDS | 45.0% | |
! | GCGAAGTACCTTATCAACGA+CGG | + | chr4_2:24745789-24745808 | Msa0595580:CDS | 45.0% |
ATCCTAGGTAGAGCTCAACA+AGG | + | chr4_2:24746122-24746141 | Msa0595580:intron | 45.0% | |
TTCCTTGTTGAGCTCTACCT+AGG | - | chr4_2:24746127-24746146 | None:intergenic | 45.0% | |
! | CATTGGTAGCTTCCTCAACA+AGG | + | chr4_2:24746319-24746338 | Msa0595580:intron | 45.0% |
! | GTGTTAGCAATGCCTTGTTG+AGG | - | chr4_2:24746334-24746353 | None:intergenic | 45.0% |
!! | CAAGGCATTGCTAACACCAA+AGG | + | chr4_2:24746337-24746356 | Msa0595580:CDS | 45.0% |
! | AACTTGTAGCCTTAGTGAGG+TGG | + | chr4_2:24746376-24746395 | Msa0595580:CDS | 45.0% |
TTGCTTCTTCCACCTCACTA+AGG | - | chr4_2:24746388-24746407 | None:intergenic | 45.0% | |
TAGTGAGGTGGAAGAAGCAA+AGG | + | chr4_2:24746388-24746407 | Msa0595580:CDS | 45.0% | |
AGCAAAGGCTGTACTAAGGT+TGG | + | chr4_2:24746403-24746422 | Msa0595580:CDS | 45.0% | |
CCACTAGCAAGAGTTATCAC+CGG | + | chr4_2:24746614-24746633 | Msa0595580:CDS | 45.0% | |
GTTATCACCGGAAAACCATC+AGG | + | chr4_2:24746626-24746645 | Msa0595580:CDS | 45.0% | |
! | TGTGATGCCTGATGGTTTTC+CGG | - | chr4_2:24746636-24746655 | None:intergenic | 45.0% |
!! | TGAAGCATTGTGATGCCTGA+TGG | - | chr4_2:24746644-24746663 | None:intergenic | 45.0% |
ACCAGCCACCATATACTCAT+CGG | - | chr4_2:24746788-24746807 | None:intergenic | 45.0% | |
! | GTTGCTTGCTGGATTAAGTG+TGG | + | chr4_2:24747054-24747073 | Msa0595580:CDS | 45.0% |
CTTGCTGGATTAAGTGTGGT+GGG | + | chr4_2:24747058-24747077 | Msa0595580:CDS | 45.0% | |
CTACCACATAAGGATAGCCA+AGG | + | chr4_2:24747134-24747153 | Msa0595580:exon | 45.0% | |
GGAGCATATTGTGACGTAGA+CGG | + | chr4_2:24747265-24747284 | Msa0595580:three_prime_UTR | 45.0% | |
! | GATGGCGCCGTTGATTACAA+AGG | + | chr4_2:24743793-24743812 | Msa0595580:CDS | 50.0% |
ACCAGATTCGGACCTAACTG+CGG | - | chr4_2:24743824-24743843 | None:intergenic | 50.0% | |
CTGGTTATTGGAGATCCGCT+TGG | + | chr4_2:24743839-24743858 | Msa0595580:CDS | 50.0% | |
CGTTAGCAAGGTCTTAGCAC+CGG | - | chr4_2:24743971-24743990 | None:intergenic | 50.0% | |
! | TTTGGTGGCTGGGTTGAGAA+AGG | - | chr4_2:24744118-24744137 | None:intergenic | 50.0% |
!! | TGAAAGCACCTGAGAGAGGA+AGG | - | chr4_2:24744360-24744379 | None:intergenic | 50.0% |
!! | GCAATGAAAGCACCTGAGAG+AGG | - | chr4_2:24744364-24744383 | None:intergenic | 50.0% |
ACCATTACCAGGGATGCAAC+TGG | - | chr4_2:24744700-24744719 | None:intergenic | 50.0% | |
!! | GTCTGGTGTCACCATTACCA+GGG | - | chr4_2:24744710-24744729 | None:intergenic | 50.0% |
!! | AGTCTGGTGTCACCATTACC+AGG | - | chr4_2:24744711-24744730 | None:intergenic | 50.0% |
CACCAGACTAACATGTCGTC+CGG | + | chr4_2:24744722-24744741 | Msa0595580:intron | 50.0% | |
CTAGTTGCCATTGGACAAGG+TGG | + | chr4_2:24745448-24745467 | Msa0595580:CDS | 50.0% | |
TTGTGTTCAAGCTTTCGGGG+CGG | + | chr4_2:24745480-24745499 | Msa0595580:CDS | 50.0% | |
CACCAAGCAAGGGACTTCAA+TGG | + | chr4_2:24746487-24746506 | Msa0595580:CDS | 50.0% | |
CTCCATTGAAGTCCCTTGCT+TGG | - | chr4_2:24746492-24746511 | None:intergenic | 50.0% | |
! | GAGGGAGGTATGTCAAATCC+AGG | - | chr4_2:24746527-24746546 | None:intergenic | 50.0% |
! | ATCGTTTGAAGCGAAGAGGG+AGG | - | chr4_2:24746542-24746561 | None:intergenic | 50.0% |
CCGGTGATAACTCTTGCTAG+TGG | - | chr4_2:24746617-24746636 | None:intergenic | 50.0% | |
TCCGATGAGTATATGGTGGC+TGG | + | chr4_2:24746784-24746803 | Msa0595580:CDS | 50.0% | |
! | GGTGTTGGGAGCTTTCTAAG+TGG | + | chr4_2:24746932-24746951 | Msa0595580:CDS | 50.0% |
! | GCTTGCTGGATTAAGTGTGG+TGG | + | chr4_2:24747057-24747076 | Msa0595580:CDS | 50.0% |
!! | CGCAAAGGCACTACCACATA+AGG | + | chr4_2:24747124-24747143 | Msa0595580:CDS | 50.0% |
ACAAAGGACAGCCCGCAGTT+AGG | + | chr4_2:24743809-24743828 | Msa0595580:CDS | 55.0% | |
CCAGATTCGGACCTAACTGC+GGG | - | chr4_2:24743823-24743842 | None:intergenic | 55.0% | |
GCGGATTCAACTTCTGCCAC+CGG | + | chr4_2:24743949-24743968 | Msa0595580:intron | 55.0% | |
! | TAGCAAGGTCTTAGCACCGG+TGG | - | chr4_2:24743968-24743987 | None:intergenic | 55.0% |
AGGAAGGAGGGAAGCAGTTC+CGG | - | chr4_2:24744344-24744363 | None:intergenic | 55.0% | |
AGCACCTGAGAGAGGAAGGA+GGG | - | chr4_2:24744356-24744375 | None:intergenic | 55.0% | |
AAGCACCTGAGAGAGGAAGG+AGG | - | chr4_2:24744357-24744376 | None:intergenic | 55.0% | |
GCCAGTTGCATCCCTGGTAA+TGG | + | chr4_2:24744696-24744715 | Msa0595580:intron | 55.0% | |
CACCGGACGACATGTTAGTC+TGG | - | chr4_2:24744727-24744746 | None:intergenic | 55.0% | |
GCCCCGAAAGCTTGAACACA+AGG | - | chr4_2:24745481-24745500 | None:intergenic | 55.0% | |
CCCGCAGTTAGGTCCGAATC+TGG | + | chr4_2:24743820-24743839 | Msa0595580:CDS | 60.0% | |
AGAAGTTGAATCCGCGCGCG+GGG | - | chr4_2:24743944-24743963 | None:intergenic | 60.0% | |
CAGAAGTTGAATCCGCGCGC+GGG | - | chr4_2:24743945-24743964 | None:intergenic | 60.0% | |
GCAGAAGTTGAATCCGCGCG+CGG | - | chr4_2:24743946-24743965 | None:intergenic | 60.0% | |
! | TAGGTGTGGAAGTGGCGGAG+AGG | + | chr4_2:24744221-24744240 | Msa0595580:intron | 60.0% |
! | AGGTGTGGAAGTGGCGGAGA+GGG | + | chr4_2:24744222-24744241 | Msa0595580:intron | 60.0% |
GCTTCCCTCCTTCCTCTCTC+AGG | + | chr4_2:24744349-24744368 | Msa0595580:CDS | 60.0% | |
GCAGTTGCCAGTTGCATCCC+TGG | + | chr4_2:24744690-24744709 | Msa0595580:intron | 60.0% | |
GTTGGTCAATACCCCGCGCG+CGG | + | chr4_2:24743930-24743949 | Msa0595580:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 24743698 | 24747398 | 24743698 | ID=Msa0595580;Name=Msa0595580 |
chr4_2 | mRNA | 24743698 | 24747398 | 24743698 | ID=Msa0595580-mRNA-1;Parent=Msa0595580;Name=Msa0595580-mRNA-1;_AED=0.08;_eAED=0.08;_QI=47|1|1|1|1|1|4|254|557 |
chr4_2 | exon | 24743698 | 24743871 | 24743698 | ID=Msa0595580-mRNA-1:exon:6691;Parent=Msa0595580-mRNA-1 |
chr4_2 | exon | 24744224 | 24744441 | 24744224 | ID=Msa0595580-mRNA-1:exon:6692;Parent=Msa0595580-mRNA-1 |
chr4_2 | exon | 24745355 | 24745866 | 24745355 | ID=Msa0595580-mRNA-1:exon:6693;Parent=Msa0595580-mRNA-1 |
chr4_2 | exon | 24746328 | 24747398 | 24746328 | ID=Msa0595580-mRNA-1:exon:6694;Parent=Msa0595580-mRNA-1 |
chr4_2 | five_prime_UTR | 24743698 | 24743744 | 24743698 | ID=Msa0595580-mRNA-1:five_prime_utr;Parent=Msa0595580-mRNA-1 |
chr4_2 | CDS | 24743745 | 24743871 | 24743745 | ID=Msa0595580-mRNA-1:cds;Parent=Msa0595580-mRNA-1 |
chr4_2 | CDS | 24744224 | 24744441 | 24744224 | ID=Msa0595580-mRNA-1:cds;Parent=Msa0595580-mRNA-1 |
chr4_2 | CDS | 24745355 | 24745866 | 24745355 | ID=Msa0595580-mRNA-1:cds;Parent=Msa0595580-mRNA-1 |
chr4_2 | CDS | 24746328 | 24747144 | 24746328 | ID=Msa0595580-mRNA-1:cds;Parent=Msa0595580-mRNA-1 |
chr4_2 | three_prime_UTR | 24747145 | 24747398 | 24747145 | ID=Msa0595580-mRNA-1:three_prime_utr;Parent=Msa0595580-mRNA-1 |
Gene Sequence |
Protein sequence |