Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367860 | XP_003600653.2 | 98.819 | 508 | 6 | 0 | 1 | 508 | 1 | 508 | 0.0 | 1046 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367860 | sp|Q42521|DCE1_ARATH | 84.510 | 510 | 69 | 4 | 1 | 508 | 1 | 502 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367860 | A0A396IRV4 | 98.819 | 508 | 6 | 0 | 1 | 508 | 1 | 508 | 0.0 | 1046 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031410 | Msa0367860 | 0.814176 | 1.760421e-51 | -8.615850e-47 |
| Msa0037760 | Msa0367860 | 0.808438 | 3.096605e-50 | -8.615850e-47 |
| Msa0139680 | Msa0367860 | 0.829419 | 5.202643e-55 | -8.615850e-47 |
| Msa0150620 | Msa0367860 | 0.825567 | 4.369564e-54 | -8.615850e-47 |
| Msa0153860 | Msa0367860 | 0.812372 | 4.383642e-51 | -8.615850e-47 |
| Msa0170770 | Msa0367860 | 0.805519 | 1.283600e-49 | -8.615850e-47 |
| Msa0185100 | Msa0367860 | 0.816665 | 4.919937e-52 | -8.615850e-47 |
| Msa0186240 | Msa0367860 | 0.827270 | 1.716284e-54 | -8.615850e-47 |
| Msa0193190 | Msa0367860 | 0.828176 | 1.039581e-54 | -8.615850e-47 |
| Msa0367860 | Msa0393100 | 0.846526 | 2.054786e-59 | -8.615850e-47 |
| Msa0367860 | Msa0405210 | 0.821248 | 4.466436e-53 | -8.615850e-47 |
| Msa0367860 | Msa0415640 | 0.872385 | 3.313523e-67 | -8.615850e-47 |
| Msa0367860 | Msa0434300 | 0.811997 | 5.292094e-51 | -8.615850e-47 |
| Msa0367860 | Msa0434400 | 0.819149 | 1.351812e-52 | -8.615850e-47 |
| Msa0367860 | Msa0440730 | 0.801501 | 8.741631e-49 | -8.615850e-47 |
| Msa0367860 | Msa0441260 | 0.809884 | 1.517574e-50 | -8.615850e-47 |
| Msa0367860 | Msa0449490 | 0.801228 | 9.940313e-49 | -8.615850e-47 |
| Msa0367860 | Msa0460600 | 0.912508 | 1.797472e-83 | -8.615850e-47 |
| Msa0367860 | Msa0478080 | 0.827880 | 1.225122e-54 | -8.615850e-47 |
| Msa0367860 | Msa0488580 | 0.839043 | 2.005885e-57 | -8.615850e-47 |
| Msa0367860 | Msa0497690 | 0.806536 | 7.843714e-50 | -8.615850e-47 |
| Msa0367860 | Msa0497860 | 0.806246 | 9.029195e-50 | -8.615850e-47 |
| Msa0367860 | Msa0522140 | 0.812170 | 4.850840e-51 | -8.615850e-47 |
| Msa0367860 | Msa0522170 | 0.830635 | 2.627697e-55 | -8.615850e-47 |
| Msa0367860 | Msa0531050 | 0.818660 | 1.745530e-52 | -8.615850e-47 |
| Msa0367860 | Msa0592660 | 0.855292 | 6.956196e-62 | -8.615850e-47 |
| Msa0367860 | Msa0595580 | 0.804550 | 2.046718e-49 | -8.615850e-47 |
| Msa0367860 | Msa0615200 | 0.842517 | 2.463803e-58 | -8.615850e-47 |
| Msa0367860 | Msa0615210 | 0.851244 | 1.007033e-60 | -8.615850e-47 |
| Msa0367860 | Msa0652590 | 0.806954 | 6.399539e-50 | -8.615850e-47 |
| Msa0367860 | Msa0662460 | 0.834596 | 2.734799e-56 | -8.615850e-47 |
| Msa0367860 | Msa0682110 | 0.807988 | 3.863071e-50 | -8.615850e-47 |
| Msa0367860 | Msa0698280 | 0.831905 | 1.280484e-55 | -8.615850e-47 |
| Msa0367860 | Msa0704560 | 0.832083 | 1.157166e-55 | -8.615850e-47 |
| Msa0367860 | Msa0709140 | 0.826483 | 2.646476e-54 | -8.615850e-47 |
| Msa0367860 | Msa0725580 | 0.807892 | 4.048525e-50 | -8.615850e-47 |
| Msa0367860 | Msa0758520 | 0.804041 | 2.612888e-49 | -8.615850e-47 |
| Msa0367860 | Msa0758570 | 0.804324 | 2.281393e-49 | -8.615850e-47 |
| Msa0367860 | Msa0790920 | 0.826543 | 2.561485e-54 | -8.615850e-47 |
| Msa0367860 | Msa0838870 | 0.818604 | 1.797652e-52 | -8.615850e-47 |
| Msa0367860 | Msa0945330 | 0.801709 | 7.924191e-49 | -8.615850e-47 |
| Msa0367860 | Msa1030210 | 0.815801 | 7.673220e-52 | -8.615850e-47 |
| Msa0367860 | Msa1030240 | 0.835213 | 1.913068e-56 | -8.615850e-47 |
| Msa0367860 | Msa1035050 | 0.811199 | 7.889781e-51 | -8.615850e-47 |
| Msa0367860 | Msa1041250 | 0.813253 | 2.810931e-51 | -8.615850e-47 |
| Msa0367860 | Msa1057400 | 0.819177 | 1.331688e-52 | -8.615850e-47 |
| Msa0367860 | Msa1069250 | 0.824227 | 9.048093e-54 | -8.615850e-47 |
| Msa0367860 | Msa1071350 | 0.826057 | 3.342785e-54 | -8.615850e-47 |
| Msa0367860 | Msa1075090 | 0.811493 | 6.809309e-51 | -8.615850e-47 |
| Msa0367860 | Msa1077970 | 0.845679 | 3.494644e-59 | -8.615850e-47 |
| Msa0367860 | Msa1115980 | 0.811714 | 6.096598e-51 | -8.615850e-47 |
| Msa0367860 | Msa1119920 | 0.802482 | 5.494862e-49 | -8.615850e-47 |
| Msa0367860 | Msa1120580 | 0.812123 | 4.966416e-51 | -8.615850e-47 |
| Msa0367860 | Msa1136630 | 0.822144 | 2.772536e-53 | -8.615850e-47 |
| Msa0367860 | Msa1136760 | 0.838750 | 2.388850e-57 | -8.615850e-47 |
| Msa0367860 | Msa1157110 | 0.807798 | 4.239042e-50 | -8.615850e-47 |
| Msa0367860 | Msa1157670 | 0.815842 | 7.514988e-52 | -8.615850e-47 |
| Msa0367860 | Msa1171450 | 0.804460 | 2.136966e-49 | -8.615850e-47 |
| Msa0367860 | Msa1202110 | 0.810307 | 1.230263e-50 | -8.615850e-47 |
| Msa0367860 | Msa1203810 | 0.842731 | 2.161849e-58 | -8.615850e-47 |
| Msa0367860 | Msa1254870 | 0.808817 | 2.570812e-50 | -8.615850e-47 |
| Msa0367860 | Msa1276960 | 0.813492 | 2.490308e-51 | -8.615850e-47 |
| Msa0367860 | Msa1307530 | 0.826086 | 3.290760e-54 | -8.615850e-47 |
| Msa0367860 | Msa1328430 | 0.807031 | 6.163459e-50 | -8.615850e-47 |
| Msa0367860 | Msa1369320 | 0.810240 | 1.271718e-50 | -8.615850e-47 |
| Msa0367860 | Msa1398140 | 0.835358 | 1.757748e-56 | -8.615850e-47 |
| Msa0367860 | Msa1427000 | 0.831152 | 1.962755e-55 | -8.615850e-47 |
| Msa0367860 | Msa1439780 | 0.830865 | 2.308072e-55 | -8.615850e-47 |
| Msa0367860 | Msa1451990 | 0.822238 | 2.636488e-53 | -8.615850e-47 |
| Msa0367860 | Msa1455200 | 0.821825 | 3.286415e-53 | -8.615850e-47 |
| Msa0253960 | Msa0367860 | 0.806396 | 8.396376e-50 | -8.615850e-47 |
| Msa0257760 | Msa0367860 | 0.814924 | 1.202426e-51 | -8.615850e-47 |
| Msa0273070 | Msa0367860 | 0.835667 | 1.468511e-56 | -8.615850e-47 |
| Msa0345050 | Msa0367860 | 0.817535 | 3.135903e-52 | -8.615850e-47 |
| Msa0345890 | Msa0367860 | 0.800560 | 1.361054e-48 | -8.615850e-47 |
| Msa0345980 | Msa0367860 | 0.820443 | 6.842501e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367860 | MtrunA17_Chr3g0109901 | 98.819 | 508 | 6 | 0 | 1 | 508 | 1 | 508 | 0.0 | 1046 |
| Msa0367860 | MtrunA17_Chr6g0480631 | 76.056 | 497 | 110 | 2 | 1 | 494 | 1 | 491 | 0.0 | 785 |
| Msa0367860 | MtrunA17_Chr8g0375301 | 78.097 | 452 | 98 | 1 | 1 | 451 | 1 | 452 | 0.0 | 754 |
| Msa0367860 | MtrunA17_Chr5g0433931 | 81.884 | 414 | 69 | 3 | 96 | 508 | 1 | 409 | 0.0 | 707 |
| Msa0367860 | MtrunA17_Chr5g0433921 | 90.722 | 97 | 9 | 0 | 1 | 97 | 1 | 97 | 1.80e-57 | 186 |
| Msa0367860 | MtrunA17_Chr7g0222381 | 25.549 | 364 | 239 | 12 | 81 | 433 | 157 | 499 | 3.04e-24 | 106 |
| Msa0367860 | MtrunA17_Chr5g0432951 | 76.190 | 42 | 10 | 0 | 252 | 293 | 15 | 56 | 9.72e-17 | 75.5 |
| Msa0367860 | MtrunA17_Chr5g0432961 | 46.914 | 81 | 43 | 0 | 372 | 452 | 13 | 93 | 1.05e-16 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367860 | AT5G17330.1 | 84.510 | 510 | 69 | 4 | 1 | 508 | 1 | 502 | 0.0 | 885 |
| Msa0367860 | AT2G02010.2 | 81.299 | 508 | 80 | 4 | 1 | 508 | 53 | 545 | 0.0 | 859 |
| Msa0367860 | AT2G02010.1 | 81.299 | 508 | 80 | 4 | 1 | 508 | 1 | 493 | 0.0 | 858 |
| Msa0367860 | AT1G65960.2 | 80.709 | 508 | 84 | 4 | 1 | 508 | 1 | 494 | 0.0 | 846 |
| Msa0367860 | AT2G02000.1 | 80.242 | 496 | 82 | 3 | 1 | 494 | 1 | 482 | 0.0 | 835 |
| Msa0367860 | AT3G17760.2 | 74.600 | 500 | 119 | 3 | 1 | 500 | 1 | 492 | 0.0 | 784 |
| Msa0367860 | AT3G17760.1 | 74.600 | 500 | 119 | 3 | 1 | 500 | 1 | 492 | 0.0 | 784 |
| Msa0367860 | AT1G65960.1 | 80.423 | 378 | 61 | 3 | 131 | 508 | 1 | 365 | 0.0 | 628 |
| Msa0367860 | AT1G65960.3 | 80.423 | 378 | 61 | 3 | 131 | 508 | 1 | 365 | 0.0 | 628 |
| Msa0367860 | AT1G65960.4 | 80.423 | 378 | 61 | 3 | 131 | 508 | 1 | 365 | 0.0 | 628 |
| Msa0367860 | AT3G17720.1 | 74.691 | 162 | 38 | 1 | 91 | 252 | 27 | 185 | 1.19e-81 | 252 |
| Msa0367860 | AT1G27980.1 | 24.722 | 360 | 243 | 11 | 81 | 431 | 160 | 500 | 4.90e-20 | 93.6 |
Find 132 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTCATCGTTTATTATT+TGG | 0.136280 | 3_1:-63790607 | None:intergenic |
| CTGGAATTGGTTGGGCTATT+TGG | 0.152853 | 3_1:+63795165 | Msa0367860:CDS |
| ATGTTTATACTTTATAAGTA+TGG | 0.246555 | 3_1:+63796448 | Msa0367860:three_prime_UTR |
| ATCCTTGGTTCAACGCTAAA+TGG | 0.251746 | 3_1:+63794841 | Msa0367860:CDS |
| TCGAGTTCTGGATAAATAAA+TGG | 0.285822 | 3_1:-63795074 | None:intergenic |
| CGGAAATCCCACTCGAGTTC+TGG | 0.298635 | 3_1:-63795086 | None:intergenic |
| GTCGAAAAGAATAAGGAAAC+TGG | 0.302476 | 3_1:+63794901 | Msa0367860:CDS |
| ATTTGGTATGCTGCATCCTT+TGG | 0.329291 | 3_1:-63790590 | None:intergenic |
| GCAGTTGGTGTTGGCACTGT+TGG | 0.345197 | 3_1:+63794482 | Msa0367860:CDS |
| TCTCCTTGTCGAAAAGAATA+AGG | 0.347165 | 3_1:+63794894 | Msa0367860:CDS |
| AACGATGAATTGATGCTTGA+TGG | 0.349990 | 3_1:+63790617 | Msa0367860:CDS |
| AGAGAGAAATTACTGCGATT+TGG | 0.357715 | 3_1:+63796216 | Msa0367860:CDS |
| CATGAAGTTGTGAAAGATAA+TGG | 0.363997 | 3_1:+63796155 | Msa0367860:CDS |
| AAGGATGCCAAGTTCAATCT+AGG | 0.365541 | 3_1:-63790644 | None:intergenic |
| ATCTGTGTTGCTGCTATCCT+TGG | 0.374389 | 3_1:+63794826 | Msa0367860:CDS |
| TCCGACTTGTTGAGGCGCTT+CGG | 0.376346 | 3_1:+63795942 | Msa0367860:CDS |
| ATGTGAAAGATGAGTTCTTC+AGG | 0.381067 | 3_1:-63795206 | None:intergenic |
| CCCTCAAAAGGCTGTGGAAT+TGG | 0.393571 | 3_1:+63794789 | Msa0367860:CDS |
| GGCTATAATGTTAGCTGGAT+TGG | 0.399926 | 3_1:+63794514 | Msa0367860:CDS |
| ACAATGTTGGGTTTGTCATA+AGG | 0.411349 | 3_1:-63794581 | None:intergenic |
| CCCTGTCACCACTGAGCTAC+AGG | 0.413885 | 3_1:+63790748 | Msa0367860:CDS |
| CTAGCTGCATCCACATGAAT+AGG | 0.423113 | 3_1:-63795035 | None:intergenic |
| CCTAATGACAACGCGTAAAA+CGG | 0.423881 | 3_1:-63796012 | None:intergenic |
| TTCAACTTGTGAAGGTTTGT+TGG | 0.425044 | 3_1:+63794695 | Msa0367860:intron |
| TTGTCTATGCTGGAATTGGT+TGG | 0.426198 | 3_1:+63795156 | Msa0367860:CDS |
| TTGCTAGAATCAGCTTGAAA+TGG | 0.431502 | 3_1:+63796289 | Msa0367860:exon |
| TTGGCTCCAGTGACAATGTT+GGG | 0.432381 | 3_1:-63794593 | None:intergenic |
| ACCTGTAGCTCAGTGGTGAC+AGG | 0.432542 | 3_1:-63790749 | None:intergenic |
| TGTCTATGCTGGAATTGGTT+GGG | 0.432578 | 3_1:+63795157 | Msa0367860:CDS |
| TGGCATCCTTTGTGACAACT+TGG | 0.434405 | 3_1:+63790657 | Msa0367860:CDS |
| GAAAGACGACGGTGTACCTT+TGG | 0.434840 | 3_1:+63795872 | Msa0367860:CDS |
| ACGGTTATGTGTTGAGCATC+CGG | 0.438825 | 3_1:-63795993 | None:intergenic |
| GGTCTTGTCTATGCTGGAAT+TGG | 0.440515 | 3_1:+63795152 | Msa0367860:CDS |
| TCAACTTGTGAAGGTTTGTT+GGG | 0.440857 | 3_1:+63794696 | Msa0367860:intron |
| ACTAATACGTCTTGGTTATG+AGG | 0.453134 | 3_1:+63795635 | Msa0367860:CDS |
| TTTGGTGGCCTTCACATTGA+AGG | 0.458482 | 3_1:+63795890 | Msa0367860:CDS |
| ATTTGAACAAAATGCACAAA+AGG | 0.461494 | 3_1:-63796503 | None:intergenic |
| CTTTGAAGTGGAATTGAAAG+AGG | 0.469636 | 3_1:+63794735 | Msa0367860:CDS |
| CTATGTAATGGACCCTCAAA+AGG | 0.479714 | 3_1:+63794777 | Msa0367860:CDS |
| TAGCTGGATTGGCATTCAAA+AGG | 0.488770 | 3_1:+63794525 | Msa0367860:CDS |
| AATGTTAGTGGTCACAAATA+CGG | 0.489182 | 3_1:+63795131 | Msa0367860:CDS |
| TCCGGTGGCATGCTGTATGC+TGG | 0.489283 | 3_1:-63795975 | None:intergenic |
| GGAAGAAGTTTGTGATGGAT+AGG | 0.490629 | 3_1:+63796237 | Msa0367860:CDS |
| ATCTTTCACATCAACTATCT+AGG | 0.491229 | 3_1:+63795218 | Msa0367860:CDS |
| ATGTCAGAACTTCACTTCCT+AGG | 0.491432 | 3_1:+63790220 | Msa0367860:CDS |
| GTGGGATTTCCGCTTACCAT+TGG | 0.491732 | 3_1:+63795097 | Msa0367860:CDS |
| GTGAAGAGTATCAATGTTAG+TGG | 0.498190 | 3_1:+63795119 | Msa0367860:CDS |
| GAAAGAAAGTATATTTGTGT+TGG | 0.499906 | 3_1:-63790109 | None:intergenic |
| GTTACCTTTGGAGAAGTTGA+GGG | 0.499919 | 3_1:-63795261 | None:intergenic |
| GAGAAGTTGAGGGTAAAGGT+AGG | 0.503154 | 3_1:-63795251 | None:intergenic |
| ACTTGTTGAGGCGCTTCGGA+TGG | 0.503654 | 3_1:+63795946 | Msa0367860:CDS |
| AAATACGGTCTTGTCTATGC+TGG | 0.504103 | 3_1:+63795146 | Msa0367860:CDS |
| TGGAAACCCTAGATTGAACT+TGG | 0.505999 | 3_1:+63790637 | Msa0367860:CDS |
| TCCTTTGGTATAGACTCATC+TGG | 0.507663 | 3_1:-63790575 | None:intergenic |
| TCAGAGGCTATAATGTTAGC+TGG | 0.510971 | 3_1:+63794509 | Msa0367860:CDS |
| CATAACCAAGACGTATTAGT+TGG | 0.512214 | 3_1:-63795632 | None:intergenic |
| AAAGAAAGTATATTTGTGTT+GGG | 0.513030 | 3_1:-63790108 | None:intergenic |
| CAACATGATAGTACTAAAAG+AGG | 0.514647 | 3_1:+63795815 | Msa0367860:CDS |
| TTCAAATCTCCGACTTGTTG+AGG | 0.514940 | 3_1:+63795934 | Msa0367860:CDS |
| TTTGGAGAAGTTGAGGGTAA+AGG | 0.515641 | 3_1:-63795255 | None:intergenic |
| TGTTACCTTTGGAGAAGTTG+AGG | 0.521918 | 3_1:-63795262 | None:intergenic |
| GGTAGTATTGAGCAATGACT+TGG | 0.536048 | 3_1:-63795611 | None:intergenic |
| AAGTATATTTGTGTTGGGTG+TGG | 0.536802 | 3_1:-63790103 | None:intergenic |
| GACAAACCCAACATTGTCAC+TGG | 0.537693 | 3_1:+63794587 | Msa0367860:CDS |
| TACTACCAACTAATACGTCT+TGG | 0.539700 | 3_1:+63795627 | Msa0367860:CDS |
| TGCACCACTTAAAGAAAATG+AGG | 0.543644 | 3_1:+63794457 | Msa0367860:CDS |
| CCTGTAGCTCAGTGGTGACA+GGG | 0.544380 | 3_1:-63790748 | None:intergenic |
| AGACGACGGTGTACCTTTGG+TGG | 0.544514 | 3_1:+63795875 | Msa0367860:CDS |
| TCAAAAGGCTGTGGAATTGG+TGG | 0.546678 | 3_1:+63794792 | Msa0367860:CDS |
| GAAATTCATCAAAGTTTGTG+TGG | 0.556299 | 3_1:-63795914 | None:intergenic |
| AAAGAGGTTAAGCTAAGTGA+AGG | 0.559738 | 3_1:+63794751 | Msa0367860:CDS |
| ATTCGCAAGATACTTTGAAG+TGG | 0.561414 | 3_1:+63794723 | Msa0367860:CDS |
| ATATATATGTACCTGGACAT+TGG | 0.564641 | 3_1:-63794612 | None:intergenic |
| AAGTGAAGGATACTATGTAA+TGG | 0.565226 | 3_1:+63794765 | Msa0367860:CDS |
| GATTGGCATTCAAAAGGAAG+TGG | 0.569504 | 3_1:+63794531 | Msa0367860:CDS |
| AGGATGCCAAGTTCAATCTA+GGG | 0.569848 | 3_1:-63790643 | None:intergenic |
| AAAGAAAATGAGGCTGCAGT+TGG | 0.571389 | 3_1:+63794467 | Msa0367860:CDS |
| GGAAGCAAAGGTTGAGTGGA+CGG | 0.572844 | 3_1:-63790193 | None:intergenic |
| TGTCACTGGAGCCAATGTCC+AGG | 0.573804 | 3_1:+63794601 | Msa0367860:CDS |
| TATTTATCCAGAACTCGAGT+GGG | 0.578175 | 3_1:+63795079 | Msa0367860:CDS |
| TGAGTGTGATAAACTCATCA+TGG | 0.579495 | 3_1:+63790688 | Msa0367860:CDS |
| AATCAGCTTGAAATGGAACA+AGG | 0.581190 | 3_1:+63796296 | Msa0367860:three_prime_UTR |
| AGCGGGAAGCAAAGGTTGAG+TGG | 0.584467 | 3_1:-63790197 | None:intergenic |
| TTTACCCTCAACTTCTCCAA+AGG | 0.585575 | 3_1:+63795257 | Msa0367860:CDS |
| ATTGGCTCCAGTGACAATGT+TGG | 0.587848 | 3_1:-63794594 | None:intergenic |
| TCCAGCATACAGCATGCCAC+CGG | 0.588279 | 3_1:+63795974 | Msa0367860:CDS |
| AATGGACCCTCAAAAGGCTG+TGG | 0.588314 | 3_1:+63794783 | Msa0367860:CDS |
| TAATGATGTGTATGAAACAG+AGG | 0.591917 | 3_1:-63790078 | None:intergenic |
| ATCCTTTGTGACAACTTGGA+TGG | 0.592505 | 3_1:+63790661 | Msa0367860:CDS |
| GCGAGGATAAAGATGATAAG+TGG | 0.592545 | 3_1:+63796113 | Msa0367860:CDS |
| TCTATGATTCTCATGATGAG+TGG | 0.592661 | 3_1:+63796406 | Msa0367860:three_prime_UTR |
| TGGCACTGTTGGCTCATCAG+AGG | 0.595925 | 3_1:+63794493 | Msa0367860:CDS |
| AAGTGAAGTTCTGACATAGC+GGG | 0.596432 | 3_1:-63790214 | None:intergenic |
| TCTGACATAGCGGGAAGCAA+AGG | 0.597769 | 3_1:-63790205 | None:intergenic |
| AATGAGGCTGCAGTTGGTGT+TGG | 0.597938 | 3_1:+63794473 | Msa0367860:CDS |
| AAGTTGAATGATAAGATGAA+TGG | 0.598555 | 3_1:+63796263 | Msa0367860:CDS |
| CATGTGGATGCAGCTAGTGG+TGG | 0.599570 | 3_1:+63795041 | Msa0367860:CDS |
| CACCATGGTTCTCTCTAAGA+CGG | 0.599826 | 3_1:+63790152 | Msa0367860:exon |
| TTATTTATCCAGAACTCGAG+TGG | 0.603826 | 3_1:+63795078 | Msa0367860:CDS |
| TTGGGCTATTTGGAGAAGCA+AGG | 0.608130 | 3_1:+63795175 | Msa0367860:CDS |
| TCATTAGGGAGGATTTCTCA+AGG | 0.609229 | 3_1:+63796027 | Msa0367860:CDS |
| CTCCATTTAGCGTTGAACCA+AGG | 0.610227 | 3_1:-63794843 | None:intergenic |
| GCCAGATGAGTCTATACCAA+AGG | 0.611743 | 3_1:+63790574 | Msa0367860:CDS |
| TCGAAAAGAATAAGGAAACT+GGG | 0.614116 | 3_1:+63794902 | Msa0367860:CDS |
| TTTACGCGTTGTCATTAGGG+AGG | 0.614957 | 3_1:+63796016 | Msa0367860:CDS |
| TTCAATGTGAAGGCCACCAA+AGG | 0.619278 | 3_1:-63795888 | None:intergenic |
| TACTCTTCACCAATGGTAAG+CGG | 0.619728 | 3_1:-63795106 | None:intergenic |
| CTTAGAGAGAACCATGGTGA+TGG | 0.622922 | 3_1:-63790148 | None:intergenic |
| ATCAGCTTGAAATGGAACAA+GGG | 0.623347 | 3_1:+63796297 | Msa0367860:three_prime_UTR |
| AACATGATAGTACTAAAAGA+GGG | 0.624331 | 3_1:+63795816 | Msa0367860:CDS |
| ATGGGACACTCCTATTCATG+TGG | 0.625531 | 3_1:+63795025 | Msa0367860:CDS |
| ATTCATGTGGATGCAGCTAG+TGG | 0.626108 | 3_1:+63795038 | Msa0367860:CDS |
| TCCGAAGCGCCTCAACAAGT+CGG | 0.626271 | 3_1:-63795943 | None:intergenic |
| CAGAACAAAAGAAAACAAGA+AGG | 0.631442 | 3_1:+63794554 | Msa0367860:CDS |
| ATGATGAGTTTATCACACTC+AGG | 0.633349 | 3_1:-63790686 | None:intergenic |
| TGTGTGGTCCTTCAATGTGA+AGG | 0.636795 | 3_1:-63795898 | None:intergenic |
| CTCCATCCAAGTTGTCACAA+AGG | 0.640690 | 3_1:-63790663 | None:intergenic |
| AAGGATAGCAGCAACACAGA+TGG | 0.642966 | 3_1:-63794824 | None:intergenic |
| ACATTGATACTCTTCACCAA+TGG | 0.659392 | 3_1:-63795113 | None:intergenic |
| GAAAGATAATGGTCAAGTAG+TGG | 0.665686 | 3_1:+63796166 | Msa0367860:CDS |
| GATTTGGAAGAAGTTTGTGA+TGG | 0.665700 | 3_1:+63796232 | Msa0367860:CDS |
| AGAGAGAACCATGGTGATGG+TGG | 0.673596 | 3_1:-63790145 | None:intergenic |
| TGATGTGTATGAAACAGAGG+AGG | 0.675479 | 3_1:-63790075 | None:intergenic |
| CATCATCACCACCATCACCA+TGG | 0.680042 | 3_1:+63790137 | Msa0367860:exon |
| AACATTGTGTCGAAAGACGA+CGG | 0.682392 | 3_1:+63795861 | Msa0367860:CDS |
| GACGGAGACATCAGACTCAG+AGG | 0.688794 | 3_1:-63790175 | None:intergenic |
| AGCTTGATTCACTTACTGCG+AGG | 0.692666 | 3_1:+63796096 | Msa0367860:CDS |
| AGGGTATACCTGTAGCTCAG+TGG | 0.694675 | 3_1:-63790756 | None:intergenic |
| GAAGTGAAGTTCTGACATAG+CGG | 0.697054 | 3_1:-63790215 | None:intergenic |
| GTTATGTGTTGAGCATCCGG+TGG | 0.707543 | 3_1:-63795990 | None:intergenic |
| GGCCGTCTTAGAGAGAACCA+TGG | 0.738145 | 3_1:-63790154 | None:intergenic |
| CTTTCTCTATATCAGCTACG+AGG | 0.765112 | 3_1:-63796064 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAATATAAATATATA+TGG | - | chr3_1:63791654-63791673 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr3_1:63791946-63791965 | Msa0367860:intron | 0.0% |
| !!! | TGATCATTTTATTTTTTAAA+CGG | + | chr3_1:63790257-63790276 | Msa0367860:intron | 10.0% |
| !!! | TTAATTTTAAAAAAGGAATT+GGG | - | chr3_1:63791079-63791098 | None:intergenic | 10.0% |
| !!! | TTTAATTTTAAAAAAGGAAT+TGG | - | chr3_1:63791080-63791099 | None:intergenic | 10.0% |
| !!! | ATTTATTAATTTTTGTTTTG+TGG | + | chr3_1:63791119-63791138 | Msa0367860:intron | 10.0% |
| !! | CAATAAATAATTAATAGTTA+AGG | - | chr3_1:63791151-63791170 | None:intergenic | 10.0% |
| !! | TTAATTGGAAAATTAAATAT+GGG | - | chr3_1:63791430-63791449 | None:intergenic | 10.0% |
| !! | ATTAATTGGAAAATTAAATA+TGG | - | chr3_1:63791431-63791450 | None:intergenic | 10.0% |
| !!! | TTTTTTAAGGAATAATTAAT+TGG | - | chr3_1:63791445-63791464 | None:intergenic | 10.0% |
| !!! | AATTAATTGGATTTTTTTTA+AGG | - | chr3_1:63791458-63791477 | None:intergenic | 10.0% |
| !! | ATATCATAAAATTAATTAGA+AGG | + | chr3_1:63791908-63791927 | Msa0367860:intron | 10.0% |
| !!! | TTTTGTTTTGAAAATATTTT+AGG | + | chr3_1:63792262-63792281 | Msa0367860:intron | 10.0% |
| !!! | TTTTTGTAAAAAAAAAATCT+CGG | - | chr3_1:63792720-63792739 | None:intergenic | 10.0% |
| !! | CAAAATAAAAAATATTTATC+GGG | + | chr3_1:63793704-63793723 | Msa0367860:intron | 10.0% |
| !! | AAAATAAAATGATCAACATA+AGG | - | chr3_1:63790252-63790271 | None:intergenic | 15.0% |
| !! | ATAAACAAAAAGTAAGTAAA+AGG | - | chr3_1:63790794-63790813 | None:intergenic | 15.0% |
| !! | TATTACAACAAATCAAATAA+AGG | - | chr3_1:63790827-63790846 | None:intergenic | 15.0% |
| !! | TAAAGGAAATTAGATTAATA+AGG | - | chr3_1:63790976-63790995 | None:intergenic | 15.0% |
| !! | TTTAATATATGCATCAATTA+AGG | - | chr3_1:63791009-63791028 | None:intergenic | 15.0% |
| !!! | TAATTTTAAAAAAGGAATTG+GGG | - | chr3_1:63791078-63791097 | None:intergenic | 15.0% |
| !! | TATTAATTATTTATTGCACA+TGG | + | chr3_1:63791155-63791174 | Msa0367860:intron | 15.0% |
| !! | TAATTGGAAAATTAAATATG+GGG | - | chr3_1:63791429-63791448 | None:intergenic | 15.0% |
| !! | TAACTTATAAAACAAAGAAA+AGG | - | chr3_1:63791513-63791532 | None:intergenic | 15.0% |
| !!! | TTTTCTTTGTTTTATAAGTT+AGG | + | chr3_1:63791512-63791531 | Msa0367860:intron | 15.0% |
| !! | AATAAAAGAGAAGATATAAT+TGG | + | chr3_1:63791684-63791703 | Msa0367860:intron | 15.0% |
| !! | ATAAAAGAGAAGATATAATT+GGG | + | chr3_1:63791685-63791704 | Msa0367860:intron | 15.0% |
| !! | CTAAAATTGAAAAATACAAA+AGG | - | chr3_1:63791727-63791746 | None:intergenic | 15.0% |
| !!! | CTTTTGTATTTTTCAATTTT+AGG | + | chr3_1:63791725-63791744 | Msa0367860:intron | 15.0% |
| !! | TAATACTATATAACAATGAA+TGG | - | chr3_1:63792128-63792147 | None:intergenic | 15.0% |
| !!! | CAATCTTTTTTTTTAGTTAA+GGG | - | chr3_1:63792593-63792612 | None:intergenic | 15.0% |
| !!! | ACAATCTTTTTTTTTAGTTA+AGG | - | chr3_1:63792594-63792613 | None:intergenic | 15.0% |
| !! | TTAATAAAAAACGTTAAGTA+TGG | - | chr3_1:63792929-63792948 | None:intergenic | 15.0% |
| !!! | ACGTTTTTTATTAAACTTAA+CGG | + | chr3_1:63792935-63792954 | Msa0367860:intron | 15.0% |
| !!! | AACAATCTTTTTTTTAGTAA+AGG | + | chr3_1:63793009-63793028 | Msa0367860:intron | 15.0% |
| !!! | ACAATCTTTTTTTTAGTAAA+GGG | + | chr3_1:63793010-63793029 | Msa0367860:intron | 15.0% |
| !!! | AACTTTAACTGTTTTTTTTT+TGG | - | chr3_1:63793134-63793153 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr3_1:63793829-63793848 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr3_1:63793828-63793847 | Msa0367860:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr3_1:63793955-63793974 | Msa0367860:intron | 15.0% |
| !! | GAGTACATAATATTAATTAA+GGG | + | chr3_1:63794007-63794026 | Msa0367860:intron | 15.0% |
| !!! | TATACATACTCATTTTAATT+AGG | - | chr3_1:63794295-63794314 | None:intergenic | 15.0% |
| !!! | TATAGCTTTTTTTTTTGTTA+AGG | + | chr3_1:63796347-63796366 | Msa0367860:three_prime_UTR | 15.0% |
| !! | ATGTTTATACTTTATAAGTA+TGG | + | chr3_1:63796448-63796467 | Msa0367860:three_prime_UTR | 15.0% |
| !!! | AAAGAAAGTATATTTGTGTT+GGG | - | chr3_1:63790111-63790130 | None:intergenic | 20.0% |
| !!! | GTTTGATAGTAAAATAACTA+TGG | + | chr3_1:63790460-63790479 | Msa0367860:intron | 20.0% |
| !!! | AAATCATATTTTGAGAATCA+AGG | + | chr3_1:63790491-63790510 | Msa0367860:intron | 20.0% |
| !! | TCAATTCATCGTTTATTATT+TGG | - | chr3_1:63790610-63790629 | None:intergenic | 20.0% |
| !! | TAGTATTAAGAAACATATCA+TGG | + | chr3_1:63790850-63790869 | Msa0367860:intron | 20.0% |
| !!! | TCTTTTTTAGTTGTCATTTT+CGG | - | chr3_1:63791329-63791348 | None:intergenic | 20.0% |
| !! | AAAATGACAACTAAAAAAGA+AGG | + | chr3_1:63791329-63791348 | Msa0367860:intron | 20.0% |
| !! | GAATCACTTAAAAATATTAG+TGG | + | chr3_1:63791376-63791395 | Msa0367860:intron | 20.0% |
| !!! | AAGGAATTTTCAAAACATTT+CGG | - | chr3_1:63791494-63791513 | None:intergenic | 20.0% |
| !! | CTAAATATTTGTAATAACGA+TGG | - | chr3_1:63791837-63791856 | None:intergenic | 20.0% |
| !!! | AGATACTTAGAAGTATTATT+AGG | - | chr3_1:63792185-63792204 | None:intergenic | 20.0% |
| !!! | TTTTCAAAACAAAAATCACT+AGG | - | chr3_1:63792256-63792275 | None:intergenic | 20.0% |
| !!! | AAATATTTTAGGTAGAATTG+TGG | + | chr3_1:63792273-63792292 | Msa0367860:intron | 20.0% |
| !!! | AATATTTTAGGTAGAATTGT+GGG | + | chr3_1:63792274-63792293 | Msa0367860:intron | 20.0% |
| !!! | TTTTTTTTTTAGTCTCGTTT+TGG | + | chr3_1:63792631-63792650 | Msa0367860:intron | 20.0% |
| !!! | ACTTTTTTTTTAAACCCTAA+CGG | - | chr3_1:63792663-63792682 | None:intergenic | 20.0% |
| !! | TTAAAAAAAAAGTTAACTCC+TGG | + | chr3_1:63792670-63792689 | Msa0367860:intron | 20.0% |
| !! | CAAACAAAAAATAGATGTAT+AGG | + | chr3_1:63793198-63793217 | Msa0367860:intron | 20.0% |
| !! | AAAAATAGATGTATAGGTAA+AGG | + | chr3_1:63793204-63793223 | Msa0367860:intron | 20.0% |
| !! | ATCTGTAATGAAGATTAATT+AGG | - | chr3_1:63793556-63793575 | None:intergenic | 20.0% |
| !! | TATAATATGACAATGACTTA+CGG | - | chr3_1:63793601-63793620 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr3_1:63793838-63793857 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr3_1:63793915-63793934 | Msa0367860:intron | 20.0% |
| !! | GGAGTACATAATATTAATTA+AGG | + | chr3_1:63794006-63794025 | Msa0367860:intron | 20.0% |
| !! | AGCGATTTATATAACATTAA+AGG | + | chr3_1:63794047-63794066 | Msa0367860:intron | 20.0% |
| !! | TTAAAATGAGTATGTATAGT+AGG | + | chr3_1:63794297-63794316 | Msa0367860:intron | 20.0% |
| !!! | CATAATTTTTGTCATTGAAA+TGG | - | chr3_1:63794323-63794342 | None:intergenic | 20.0% |
| !! | CATTTCAATGACAAAAATTA+TGG | + | chr3_1:63794321-63794340 | Msa0367860:intron | 20.0% |
| !!! | AGTATTTTTTTAATTGGTCA+TGG | - | chr3_1:63794352-63794371 | None:intergenic | 20.0% |
| !!! | TATGAAATTCTTTTTGTAGA+TGG | + | chr3_1:63795006-63795025 | Msa0367860:intron | 20.0% |
| !!! | ATGAAATTCTTTTTGTAGAT+GGG | + | chr3_1:63795007-63795026 | Msa0367860:intron | 20.0% |
| !! | CAAAATATAAAGTTGAAATG+TGG | + | chr3_1:63795428-63795447 | Msa0367860:intron | 20.0% |
| !! | TTATGATAAGTATGTAAAAG+GGG | - | chr3_1:63795682-63795701 | None:intergenic | 20.0% |
| !! | GTTATGATAAGTATGTAAAA+GGG | - | chr3_1:63795683-63795702 | None:intergenic | 20.0% |
| !! | AGTTATGATAAGTATGTAAA+AGG | - | chr3_1:63795684-63795703 | None:intergenic | 20.0% |
| !! | GAAAGAAAGTATATTTGTGT+TGG | - | chr3_1:63790112-63790131 | None:intergenic | 25.0% |
| ! | AATGCAAATCTATGGATTTA+AGG | - | chr3_1:63790401-63790420 | None:intergenic | 25.0% |
| ! | GTAAAATAACTATGGTATCT+AGG | + | chr3_1:63790468-63790487 | Msa0367860:intron | 25.0% |
| !! | TAAGTAAAAGGTATGATGTA+GGG | - | chr3_1:63790782-63790801 | None:intergenic | 25.0% |
| !!! | ATTTCCTGACTTATTTTTAG+TGG | - | chr3_1:63791603-63791622 | None:intergenic | 25.0% |
| ! | TACAAAAGGTCAAAATACAA+AGG | - | chr3_1:63791713-63791732 | None:intergenic | 25.0% |
| !!! | AGCCTAATTTTTTTACTGTT+GGG | - | chr3_1:63792523-63792542 | None:intergenic | 25.0% |
| !!! | AAGCCTAATTTTTTTACTGT+TGG | - | chr3_1:63792524-63792543 | None:intergenic | 25.0% |
| ! | GATACCTGTTAAATACTTAA+GGG | - | chr3_1:63793041-63793060 | None:intergenic | 25.0% |
| !!! | AGTTTTTTTTAGTCTCGTTT+TGG | - | chr3_1:63792978-63792997 | None:intergenic | 25.0% |
| ! | GATACCTGTTAAATACTTAA+GGG | + | chr3_1:63793041-63793060 | Msa0367860:intron | 25.0% |
| !! | AGGTGTTCAACTTAAATTTT+TGG | - | chr3_1:63793085-63793104 | None:intergenic | 25.0% |
| ! | GTCATTTGTAACATTATAGT+TGG | + | chr3_1:63793360-63793379 | Msa0367860:intron | 25.0% |
| ! | TGAAGGATTTGAAAAGAAAA+CGG | - | chr3_1:63793437-63793456 | None:intergenic | 25.0% |
| ! | GGATAAGAAATAAATGCAAA+AGG | - | chr3_1:63793535-63793554 | None:intergenic | 25.0% |
| ! | ATAATATGACAATGACTTAC+GGG | - | chr3_1:63793600-63793619 | None:intergenic | 25.0% |
| !!! | AAACGACACTCATTTTAAAA+CGG | - | chr3_1:63793746-63793765 | None:intergenic | 25.0% |
| !!! | TTTAAAATGAGTGTCGTTTT+AGG | + | chr3_1:63793747-63793766 | Msa0367860:intron | 25.0% |
| ! | TTTAAATGCGACAAATATCA+TGG | + | chr3_1:63794099-63794118 | Msa0367860:intron | 25.0% |
| ! | TTAAATGCGACAAATATCAT+GGG | + | chr3_1:63794100-63794119 | Msa0367860:intron | 25.0% |
| ! | TATATGGATATATGCAGAAT+CGG | + | chr3_1:63794405-63794424 | Msa0367860:intron | 25.0% |
| ! | ACATGTTATATATATGTACC+TGG | - | chr3_1:63794622-63794641 | None:intergenic | 25.0% |
| !! | GTTTTTGAACTATTTGAATG+AGG | + | chr3_1:63794655-63794674 | Msa0367860:intron | 25.0% |
| ! | AAAATAAAGAGACGACATTA+TGG | - | chr3_1:63794961-63794980 | None:intergenic | 25.0% |
| !!! | CGTCTCTTTATTTTACATTT+TGG | + | chr3_1:63794967-63794986 | Msa0367860:intron | 25.0% |
| !!! | TATTTTACATTTTGGAGTTG+AGG | + | chr3_1:63794975-63794994 | Msa0367860:intron | 25.0% |
| !!! | TAGCTTTTGAAACTTGAATT+TGG | - | chr3_1:63795504-63795523 | None:intergenic | 25.0% |
| ! | TTTACAAAATTATGCAATGC+AGG | + | chr3_1:63795582-63795601 | Msa0367860:intron | 25.0% |
| ! | AACATGATAGTACTAAAAGA+GGG | + | chr3_1:63795816-63795835 | Msa0367860:CDS | 25.0% |
| ! | AAGTTGAATGATAAGATGAA+TGG | + | chr3_1:63796263-63796282 | Msa0367860:CDS | 25.0% |
| ! | ATTTGAACAAAATGCACAAA+AGG | - | chr3_1:63796506-63796525 | None:intergenic | 25.0% |
| TAATGATGTGTATGAAACAG+AGG | - | chr3_1:63790081-63790100 | None:intergenic | 30.0% | |
| ACAAGATCAATGCAAATCTA+TGG | - | chr3_1:63790409-63790428 | None:intergenic | 30.0% | |
| ! | GTCAACGTAGTTTTTGTTAA+TGG | - | chr3_1:63790717-63790736 | None:intergenic | 30.0% |
| TAACAAAAACTACGTTGACA+TGG | + | chr3_1:63790718-63790737 | Msa0367860:CDS | 30.0% | |
| ! | GTAAGTAAAAGGTATGATGT+AGG | - | chr3_1:63790783-63790802 | None:intergenic | 30.0% |
| TAAGGAAAGAAGAAGATATC+AGG | - | chr3_1:63790958-63790977 | None:intergenic | 30.0% | |
| ATTAAGGCAAGGTCAAATAA+AGG | - | chr3_1:63790993-63791012 | None:intergenic | 30.0% | |
| TATATGCATCAATTAAGGCA+AGG | - | chr3_1:63791004-63791023 | None:intergenic | 30.0% | |
| CTAGCTAATGAAAAGCAATA+AGG | - | chr3_1:63791034-63791053 | None:intergenic | 30.0% | |
| ACATAATATATGCAAGTTCC+AGG | + | chr3_1:63791561-63791580 | Msa0367860:intron | 30.0% | |
| CATAATATATGCAAGTTCCA+GGG | + | chr3_1:63791562-63791581 | Msa0367860:intron | 30.0% | |
| TATATATGGCACACTTGTAA+GGG | - | chr3_1:63791640-63791659 | None:intergenic | 30.0% | |
| ATATATATGGCACACTTGTA+AGG | - | chr3_1:63791641-63791660 | None:intergenic | 30.0% | |
| !!! | CCTAATTTTTTTACTGTTGG+GGG | - | chr3_1:63792521-63792540 | None:intergenic | 30.0% |
| !!! | GCCTAATTTTTTTACTGTTG+GGG | - | chr3_1:63792522-63792541 | None:intergenic | 30.0% |
| TAGTCCCTTAAGTATTTAAC+AGG | + | chr3_1:63792555-63792574 | Msa0367860:intron | 30.0% | |
| CGATACCTGTTAAATACTTA+AGG | - | chr3_1:63793040-63793059 | None:intergenic | 30.0% | |
| !!! | TTTTTTAAACCCTAACGGAA+AGG | - | chr3_1:63792658-63792677 | None:intergenic | 30.0% |
| TTAACGGAAACATAACAGAA+GGG | + | chr3_1:63792951-63792970 | Msa0367860:intron | 30.0% | |
| CGATACCTGTTAAATACTTA+AGG | + | chr3_1:63793040-63793059 | Msa0367860:intron | 30.0% | |
| !!! | TTTTGGCTTAAATGCTCTTT+TGG | - | chr3_1:63793068-63793087 | None:intergenic | 30.0% |
| AAATGTTTGAATTTGAGCGA+AGG | - | chr3_1:63793105-63793124 | None:intergenic | 30.0% | |
| !! | CTAATTAACACCTCTAAGAT+TGG | - | chr3_1:63793164-63793183 | None:intergenic | 30.0% |
| ! | AGTGTTATTCAAGTGTAAAC+TGG | - | chr3_1:63793240-63793259 | None:intergenic | 30.0% |
| TTTACACTTGAATAACACTC+CGG | + | chr3_1:63793241-63793260 | Msa0367860:intron | 30.0% | |
| ! | GTTGGTTACATTGATGATAT+TGG | + | chr3_1:63793275-63793294 | Msa0367860:intron | 30.0% |
| GTTGTACACTTATGATATTG+TGG | - | chr3_1:63793305-63793324 | None:intergenic | 30.0% | |
| TCATCATCTGTAATGAATGA+AGG | - | chr3_1:63793454-63793473 | None:intergenic | 30.0% | |
| !!! | TGGGGGAGTATTTTTTTAAT+TGG | - | chr3_1:63794358-63794377 | None:intergenic | 30.0% |
| ! | AGTTGCTTCTAACTTGTATA+TGG | + | chr3_1:63794389-63794408 | Msa0367860:intron | 30.0% |
| CAGAACAAAAGAAAACAAGA+AGG | + | chr3_1:63794554-63794573 | Msa0367860:CDS | 30.0% | |
| ATATATATGTACCTGGACAT+TGG | - | chr3_1:63794615-63794634 | None:intergenic | 30.0% | |
| AAGTGAAGGATACTATGTAA+TGG | + | chr3_1:63794765-63794784 | Msa0367860:CDS | 30.0% | |
| ! | TTTCCTTATTCTTTTCGACA+AGG | - | chr3_1:63794900-63794919 | None:intergenic | 30.0% |
| TCGAAAAGAATAAGGAAACT+GGG | + | chr3_1:63794902-63794921 | Msa0367860:CDS | 30.0% | |
| ! | GACATTATGGAAGTTTTTGA+AGG | - | chr3_1:63794948-63794967 | None:intergenic | 30.0% |
| !! | TCGAGTTCTGGATAAATAAA+TGG | - | chr3_1:63795077-63795096 | None:intergenic | 30.0% |
| AATGTTAGTGGTCACAAATA+CGG | + | chr3_1:63795131-63795150 | Msa0367860:CDS | 30.0% | |
| ATCTTTCACATCAACTATCT+AGG | + | chr3_1:63795218-63795237 | Msa0367860:CDS | 30.0% | |
| TTCCAATTATGTGTTACCTT+TGG | - | chr3_1:63795276-63795295 | None:intergenic | 30.0% | |
| TAACACATAATTGGAACACT+TGG | + | chr3_1:63795280-63795299 | Msa0367860:intron | 30.0% | |
| TGTATGATCAAAAGATCGAA+CGG | - | chr3_1:63795455-63795474 | None:intergenic | 30.0% | |
| CAACATGATAGTACTAAAAG+AGG | + | chr3_1:63795815-63795834 | Msa0367860:CDS | 30.0% | |
| GAAATTCATCAAAGTTTGTG+TGG | - | chr3_1:63795917-63795936 | None:intergenic | 30.0% | |
| CATGAAGTTGTGAAAGATAA+TGG | + | chr3_1:63796155-63796174 | Msa0367860:CDS | 30.0% | |
| AAGTATATTTGTGTTGGGTG+TGG | - | chr3_1:63790106-63790125 | None:intergenic | 35.0% | |
| TCAACATAAGGTTGTTACCT+AGG | - | chr3_1:63790240-63790259 | None:intergenic | 35.0% | |
| AACGATGAATTGATGCTTGA+TGG | + | chr3_1:63790617-63790636 | Msa0367860:CDS | 35.0% | |
| ATGATGAGTTTATCACACTC+AGG | - | chr3_1:63790689-63790708 | None:intergenic | 35.0% | |
| TGAGTGTGATAAACTCATCA+TGG | + | chr3_1:63790688-63790707 | Msa0367860:CDS | 35.0% | |
| ! | TAAAAGGTATGATGTAGGGA+GGG | - | chr3_1:63790778-63790797 | None:intergenic | 35.0% |
| ATAAACACAAGTTGTGCGTT+AGG | + | chr3_1:63790899-63790918 | Msa0367860:intron | 35.0% | |
| !!! | CTTATTTTTAGTGGTGGTCA+GGG | - | chr3_1:63791594-63791613 | None:intergenic | 35.0% |
| !!! | ACTTATTTTTAGTGGTGGTC+AGG | - | chr3_1:63791595-63791614 | None:intergenic | 35.0% |
| ACCACCACTAAAAATAAGTC+AGG | + | chr3_1:63791596-63791615 | Msa0367860:intron | 35.0% | |
| !!! | TCCTGACTTATTTTTAGTGG+TGG | - | chr3_1:63791600-63791619 | None:intergenic | 35.0% |
| ! | TCAATTTTAGGCACATCTTG+TGG | + | chr3_1:63791737-63791756 | Msa0367860:intron | 35.0% |
| GGTTGATTATACGTTGTCTA+GGG | - | chr3_1:63792107-63792126 | None:intergenic | 35.0% | |
| TGGTTGATTATACGTTGTCT+AGG | - | chr3_1:63792108-63792127 | None:intergenic | 35.0% | |
| CCCCCAACAGTAAAAAAATT+AGG | + | chr3_1:63792518-63792537 | Msa0367860:intron | 35.0% | |
| ! | GTATTTAACAGGTATCGCTT+TGG | + | chr3_1:63792566-63792585 | Msa0367860:intron | 35.0% |
| ! | TTTTCTCATAGCCAATGACA+AGG | + | chr3_1:63792893-63792912 | Msa0367860:intron | 35.0% |
| CTTAACGGAAACATAACAGA+AGG | + | chr3_1:63792950-63792969 | Msa0367860:intron | 35.0% | |
| ! | GTATTTAACAGGTATCGCTT+TGG | - | chr3_1:63792566-63792585 | None:intergenic | 35.0% |
| TGGTCCCTTAAGTATTTAAC+AGG | - | chr3_1:63793048-63793067 | None:intergenic | 35.0% | |
| TAACCAACCACAAATATCAC+CGG | - | chr3_1:63793263-63793282 | None:intergenic | 35.0% | |
| GAAAAGAAAACGGTGTAATC+AGG | - | chr3_1:63793427-63793446 | None:intergenic | 35.0% | |
| TACATTAGACAATGGCTTAC+GGG | - | chr3_1:63793493-63793512 | None:intergenic | 35.0% | |
| CTACATTAGACAATGGCTTA+CGG | - | chr3_1:63793494-63793513 | None:intergenic | 35.0% | |
| GACTGAACTACATTAGACAA+TGG | - | chr3_1:63793501-63793520 | None:intergenic | 35.0% | |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr3_1:63793877-63793896 | Msa0367860:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr3_1:63793881-63793900 | Msa0367860:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr3_1:63793981-63794000 | Msa0367860:intron | 35.0% |
| GACAAATATCATGGGATTGA+GGG | + | chr3_1:63794108-63794127 | Msa0367860:intron | 35.0% | |
| GATGTTGGTACTCATGAAAA+GGG | - | chr3_1:63794218-63794237 | None:intergenic | 35.0% | |
| AGATGTTGGTACTCATGAAA+AGG | - | chr3_1:63794219-63794238 | None:intergenic | 35.0% | |
| ! | AAGCAACTACTAGTGTTGTT+GGG | - | chr3_1:63794377-63794396 | None:intergenic | 35.0% |
| TGCACCACTTAAAGAAAATG+AGG | + | chr3_1:63794457-63794476 | Msa0367860:CDS | 35.0% | |
| ACAATGTTGGGTTTGTCATA+AGG | - | chr3_1:63794584-63794603 | None:intergenic | 35.0% | |
| ! | CACAAGTTGAACTTCTCATA+AGG | - | chr3_1:63794686-63794705 | None:intergenic | 35.0% |
| ATGAGAAGTTCAACTTGTGA+AGG | + | chr3_1:63794687-63794706 | Msa0367860:intron | 35.0% | |
| TTCAACTTGTGAAGGTTTGT+TGG | + | chr3_1:63794695-63794714 | Msa0367860:intron | 35.0% | |
| ! | TCAACTTGTGAAGGTTTGTT+GGG | + | chr3_1:63794696-63794715 | Msa0367860:intron | 35.0% |
| ! | ATTCGCAAGATACTTTGAAG+TGG | + | chr3_1:63794723-63794742 | Msa0367860:CDS | 35.0% |
| !! | CTTTGAAGTGGAATTGAAAG+AGG | + | chr3_1:63794735-63794754 | Msa0367860:CDS | 35.0% |
| AAAGAGGTTAAGCTAAGTGA+AGG | + | chr3_1:63794751-63794770 | Msa0367860:CDS | 35.0% | |
| TCTCCTTGTCGAAAAGAATA+AGG | + | chr3_1:63794894-63794913 | Msa0367860:CDS | 35.0% | |
| GTCGAAAAGAATAAGGAAAC+TGG | + | chr3_1:63794901-63794920 | Msa0367860:CDS | 35.0% | |
| TTATTTATCCAGAACTCGAG+TGG | + | chr3_1:63795078-63795097 | Msa0367860:CDS | 35.0% | |
| TATTTATCCAGAACTCGAGT+GGG | + | chr3_1:63795079-63795098 | Msa0367860:CDS | 35.0% | |
| ACATTGATACTCTTCACCAA+TGG | - | chr3_1:63795116-63795135 | None:intergenic | 35.0% | |
| !! | GTGAAGAGTATCAATGTTAG+TGG | + | chr3_1:63795119-63795138 | Msa0367860:CDS | 35.0% |
| ATGTGAAAGATGAGTTCTTC+AGG | - | chr3_1:63795209-63795228 | None:intergenic | 35.0% | |
| CTCCAAAGGTAACACATAAT+TGG | + | chr3_1:63795271-63795290 | Msa0367860:intron | 35.0% | |
| CAATCCAGATTTCTTGATTG+CGG | + | chr3_1:63795473-63795492 | Msa0367860:intron | 35.0% | |
| AATCCAGATTTCTTGATTGC+GGG | + | chr3_1:63795474-63795493 | Msa0367860:intron | 35.0% | |
| TACTACCAACTAATACGTCT+TGG | + | chr3_1:63795627-63795646 | Msa0367860:CDS | 35.0% | |
| CATAACCAAGACGTATTAGT+TGG | - | chr3_1:63795635-63795654 | None:intergenic | 35.0% | |
| ACTAATACGTCTTGGTTATG+AGG | + | chr3_1:63795635-63795654 | Msa0367860:CDS | 35.0% | |
| !! | TCTTTGCATTAACTTGTTGC+AGG | + | chr3_1:63795761-63795780 | Msa0367860:intron | 35.0% |
| !! | CTTTGCATTAACTTGTTGCA+GGG | + | chr3_1:63795762-63795781 | Msa0367860:intron | 35.0% |
| !! | TTTGCATTAACTTGTTGCAG+GGG | + | chr3_1:63795763-63795782 | Msa0367860:intron | 35.0% |
| AAAAGAGGGACTCGAAAAAA+TGG | + | chr3_1:63795830-63795849 | Msa0367860:CDS | 35.0% | |
| AAAGAGGGACTCGAAAAAAT+GGG | + | chr3_1:63795831-63795850 | Msa0367860:CDS | 35.0% | |
| ! | GAAAGATAATGGTCAAGTAG+TGG | + | chr3_1:63796166-63796185 | Msa0367860:CDS | 35.0% |
| AGAGAGAAATTACTGCGATT+TGG | + | chr3_1:63796216-63796235 | Msa0367860:CDS | 35.0% | |
| GATTTGGAAGAAGTTTGTGA+TGG | + | chr3_1:63796232-63796251 | Msa0367860:CDS | 35.0% | |
| TTGCTAGAATCAGCTTGAAA+TGG | + | chr3_1:63796289-63796308 | Msa0367860:exon | 35.0% | |
| AATCAGCTTGAAATGGAACA+AGG | + | chr3_1:63796296-63796315 | Msa0367860:three_prime_UTR | 35.0% | |
| ATCAGCTTGAAATGGAACAA+GGG | + | chr3_1:63796297-63796316 | Msa0367860:three_prime_UTR | 35.0% | |
| TCTATGATTCTCATGATGAG+TGG | + | chr3_1:63796406-63796425 | Msa0367860:three_prime_UTR | 35.0% | |
| TGATGTGTATGAAACAGAGG+AGG | - | chr3_1:63790078-63790097 | None:intergenic | 40.0% | |
| ! | AAGTGAAGTTCTGACATAGC+GGG | - | chr3_1:63790217-63790236 | None:intergenic | 40.0% |
| ! | GAAGTGAAGTTCTGACATAG+CGG | - | chr3_1:63790218-63790237 | None:intergenic | 40.0% |
| ATGTCAGAACTTCACTTCCT+AGG | + | chr3_1:63790220-63790239 | Msa0367860:CDS | 40.0% | |
| !! | GTTGATGATCACATGAAGTG+AGG | - | chr3_1:63790348-63790367 | None:intergenic | 40.0% |
| TGATCATCAGACGAAGACAA+AGG | - | chr3_1:63790372-63790391 | None:intergenic | 40.0% | |
| TCCTTTGGTATAGACTCATC+TGG | - | chr3_1:63790578-63790597 | None:intergenic | 40.0% | |
| ATTTGGTATGCTGCATCCTT+TGG | - | chr3_1:63790593-63790612 | None:intergenic | 40.0% | |
| TGGAAACCCTAGATTGAACT+TGG | + | chr3_1:63790637-63790656 | Msa0367860:CDS | 40.0% | |
| AGGATGCCAAGTTCAATCTA+GGG | - | chr3_1:63790646-63790665 | None:intergenic | 40.0% | |
| AAGGATGCCAAGTTCAATCT+AGG | - | chr3_1:63790647-63790666 | None:intergenic | 40.0% | |
| ATCCTTTGTGACAACTTGGA+TGG | + | chr3_1:63790661-63790680 | Msa0367860:CDS | 40.0% | |
| ! | GTAAAAGGTATGATGTAGGG+AGG | - | chr3_1:63790779-63790798 | None:intergenic | 40.0% |
| AGGAATTGGGGAGTAGTTAA+CGG | - | chr3_1:63791066-63791085 | None:intergenic | 40.0% | |
| TATGTATAGCTAAGCTCACG+AGG | - | chr3_1:63791546-63791565 | None:intergenic | 40.0% | |
| ATTCCCAGAACCAATGACAA+GGG | - | chr3_1:63792841-63792860 | None:intergenic | 40.0% | |
| AATTCCCAGAACCAATGACA+AGG | - | chr3_1:63792842-63792861 | None:intergenic | 40.0% | |
| GTTGTGAATGCCAATCTTAG+AGG | + | chr3_1:63793151-63793170 | Msa0367860:intron | 40.0% | |
| TAACACTCCGGTGATATTTG+TGG | + | chr3_1:63793253-63793272 | Msa0367860:intron | 40.0% | |
| TATTTGGGTGACATTGTGGT+TGG | - | chr3_1:63793401-63793420 | None:intergenic | 40.0% | |
| GGTGTAATCAGGCAGTATTT+GGG | - | chr3_1:63793416-63793435 | None:intergenic | 40.0% | |
| !! | CAGATGATGACAGTCTTGTT+AGG | + | chr3_1:63793464-63793483 | Msa0367860:intron | 40.0% |
| !! | CAGATGATGACAGTCTTGTT+AGG | + | chr3_1:63793464-63793483 | Msa0367860:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr3_1:63793880-63793899 | Msa0367860:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3_1:63793985-63794004 | Msa0367860:intron | 40.0% |
| CGACAAATATCATGGGATTG+AGG | + | chr3_1:63794107-63794126 | Msa0367860:intron | 40.0% | |
| GTGGCATCATACAAAGATGT+TGG | - | chr3_1:63794233-63794252 | None:intergenic | 40.0% | |
| ! | TATGATGCCACTGTTAGCTT+TGG | + | chr3_1:63794242-63794261 | Msa0367860:intron | 40.0% |
| ! | AGCAACTACTAGTGTTGTTG+GGG | - | chr3_1:63794376-63794395 | None:intergenic | 40.0% |
| GAAGCAACTACTAGTGTTGT+TGG | - | chr3_1:63794378-63794397 | None:intergenic | 40.0% | |
| ! | GCAGCCTCATTTTCTTTAAG+TGG | - | chr3_1:63794464-63794483 | None:intergenic | 40.0% |
| AAAGAAAATGAGGCTGCAGT+TGG | + | chr3_1:63794467-63794486 | Msa0367860:CDS | 40.0% | |
| TCAGAGGCTATAATGTTAGC+TGG | + | chr3_1:63794509-63794528 | Msa0367860:CDS | 40.0% | |
| GGCTATAATGTTAGCTGGAT+TGG | + | chr3_1:63794514-63794533 | Msa0367860:CDS | 40.0% | |
| !! | TAGCTGGATTGGCATTCAAA+AGG | + | chr3_1:63794525-63794544 | Msa0367860:CDS | 40.0% |
| GATTGGCATTCAAAAGGAAG+TGG | + | chr3_1:63794531-63794550 | Msa0367860:CDS | 40.0% | |
| !! | CTATGTAATGGACCCTCAAA+AGG | + | chr3_1:63794777-63794796 | Msa0367860:CDS | 40.0% |
| ATCCTTGGTTCAACGCTAAA+TGG | + | chr3_1:63794841-63794860 | Msa0367860:CDS | 40.0% | |
| TACTCTTCACCAATGGTAAG+CGG | - | chr3_1:63795109-63795128 | None:intergenic | 40.0% | |
| ! | AAATACGGTCTTGTCTATGC+TGG | + | chr3_1:63795146-63795165 | Msa0367860:CDS | 40.0% |
| TTGTCTATGCTGGAATTGGT+TGG | + | chr3_1:63795156-63795175 | Msa0367860:CDS | 40.0% | |
| TGTCTATGCTGGAATTGGTT+GGG | + | chr3_1:63795157-63795176 | Msa0367860:CDS | 40.0% | |
| TTTGGAGAAGTTGAGGGTAA+AGG | - | chr3_1:63795258-63795277 | None:intergenic | 40.0% | |
| TTTACCCTCAACTTCTCCAA+AGG | + | chr3_1:63795257-63795276 | Msa0367860:CDS | 40.0% | |
| ! | GTTACCTTTGGAGAAGTTGA+GGG | - | chr3_1:63795264-63795283 | None:intergenic | 40.0% |
| ! | TGTTACCTTTGGAGAAGTTG+AGG | - | chr3_1:63795265-63795284 | None:intergenic | 40.0% |
| ATCCAGATTTCTTGATTGCG+GGG | + | chr3_1:63795475-63795494 | Msa0367860:intron | 40.0% | |
| ! | GGTAGTATTGAGCAATGACT+TGG | - | chr3_1:63795614-63795633 | None:intergenic | 40.0% |
| ! | GTATGTAAAAGGGGTACGTT+TGG | - | chr3_1:63795673-63795692 | None:intergenic | 40.0% |
| ! | GCAGGGGTATAAAAATGTGA+TGG | + | chr3_1:63795779-63795798 | Msa0367860:intron | 40.0% |
| AAGAGGGACTCGAAAAAATG+GGG | + | chr3_1:63795832-63795851 | Msa0367860:CDS | 40.0% | |
| AACATTGTGTCGAAAGACGA+CGG | + | chr3_1:63795861-63795880 | Msa0367860:CDS | 40.0% | |
| !! | TTCAAATCTCCGACTTGTTG+AGG | + | chr3_1:63795934-63795953 | Msa0367860:CDS | 40.0% |
| CCTAATGACAACGCGTAAAA+CGG | - | chr3_1:63796015-63796034 | None:intergenic | 40.0% | |
| ! | CGTTTTACGCGTTGTCATTA+GGG | + | chr3_1:63796013-63796032 | Msa0367860:CDS | 40.0% |
| TCATTAGGGAGGATTTCTCA+AGG | + | chr3_1:63796027-63796046 | Msa0367860:CDS | 40.0% | |
| CTTTCTCTATATCAGCTACG+AGG | - | chr3_1:63796067-63796086 | None:intergenic | 40.0% | |
| GCGAGGATAAAGATGATAAG+TGG | + | chr3_1:63796113-63796132 | Msa0367860:CDS | 40.0% | |
| !! | GGTTGCTAAAAAGAGTGCTT+TGG | + | chr3_1:63796187-63796206 | Msa0367860:CDS | 40.0% |
| !! | GGAAGAAGTTTGTGATGGAT+AGG | + | chr3_1:63796237-63796256 | Msa0367860:CDS | 40.0% |
| CTTAGAGAGAACCATGGTGA+TGG | - | chr3_1:63790151-63790170 | None:intergenic | 45.0% | |
| ! | CACCATGGTTCTCTCTAAGA+CGG | + | chr3_1:63790152-63790171 | Msa0367860:exon | 45.0% |
| GCCAGATGAGTCTATACCAA+AGG | + | chr3_1:63790574-63790593 | Msa0367860:CDS | 45.0% | |
| TGGCATCCTTTGTGACAACT+TGG | + | chr3_1:63790657-63790676 | Msa0367860:CDS | 45.0% | |
| CTCCATCCAAGTTGTCACAA+AGG | - | chr3_1:63790666-63790685 | None:intergenic | 45.0% | |
| ATTGGGGAGTAGTTAACGGA+GGG | - | chr3_1:63791062-63791081 | None:intergenic | 45.0% | |
| AATTGGGGAGTAGTTAACGG+AGG | - | chr3_1:63791063-63791082 | None:intergenic | 45.0% | |
| !! | TCGTTTTGGTCCTTTCCGTT+AGG | + | chr3_1:63792645-63792664 | Msa0367860:intron | 45.0% |
| !! | CGTTTTGGTCCTTTCCGTTA+GGG | + | chr3_1:63792646-63792665 | Msa0367860:intron | 45.0% |
| GACACATGTCACCTTGTCAT+TGG | + | chr3_1:63792692-63792711 | Msa0367860:intron | 45.0% | |
| AAATCTCGGAGCCAATGACA+AGG | - | chr3_1:63792706-63792725 | None:intergenic | 45.0% | |
| !!! | GTCGCTTTGTCGTTGGTTTT+GGG | - | chr3_1:63792793-63792812 | None:intergenic | 45.0% |
| !!! | TGTCGCTTTGTCGTTGGTTT+TGG | - | chr3_1:63792794-63792813 | None:intergenic | 45.0% |
| TTCCCAGAACCAATGACAAG+GGG | - | chr3_1:63792840-63792859 | None:intergenic | 45.0% | |
| ACTCCGGTGATATTTGTGGT+TGG | + | chr3_1:63793257-63793276 | Msa0367860:intron | 45.0% | |
| ! | GGTGACATTGTGGTTGGTAT+TGG | - | chr3_1:63793395-63793414 | None:intergenic | 45.0% |
| GCAGTATTTGGGTGACATTG+TGG | - | chr3_1:63793405-63793424 | None:intergenic | 45.0% | |
| CGGTGTAATCAGGCAGTATT+TGG | - | chr3_1:63793417-63793436 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3_1:63793984-63794003 | Msa0367860:intron | 45.0% |
| ! | CTTTGGAGGTCTCAATACTC+AGG | + | chr3_1:63794259-63794278 | Msa0367860:intron | 45.0% |
| ! | GCAACTACTAGTGTTGTTGG+GGG | - | chr3_1:63794375-63794394 | None:intergenic | 45.0% |
| GACAAACCCAACATTGTCAC+TGG | + | chr3_1:63794587-63794606 | Msa0367860:CDS | 45.0% | |
| TTGGCTCCAGTGACAATGTT+GGG | - | chr3_1:63794596-63794615 | None:intergenic | 45.0% | |
| ! | ATTGGCTCCAGTGACAATGT+TGG | - | chr3_1:63794597-63794616 | None:intergenic | 45.0% |
| ! | CCAATTCCACAGCCTTTTGA+GGG | - | chr3_1:63794792-63794811 | None:intergenic | 45.0% |
| ! | ACCAATTCCACAGCCTTTTG+AGG | - | chr3_1:63794793-63794812 | None:intergenic | 45.0% |
| TCAAAAGGCTGTGGAATTGG+TGG | + | chr3_1:63794792-63794811 | Msa0367860:CDS | 45.0% | |
| AAGGATAGCAGCAACACAGA+TGG | - | chr3_1:63794827-63794846 | None:intergenic | 45.0% | |
| ! | ATCTGTGTTGCTGCTATCCT+TGG | + | chr3_1:63794826-63794845 | Msa0367860:CDS | 45.0% |
| ! | CTCCATTTAGCGTTGAACCA+AGG | - | chr3_1:63794846-63794865 | None:intergenic | 45.0% |
| ATGGGACACTCCTATTCATG+TGG | + | chr3_1:63795025-63795044 | Msa0367860:CDS | 45.0% | |
| CTAGCTGCATCCACATGAAT+AGG | - | chr3_1:63795038-63795057 | None:intergenic | 45.0% | |
| ATTCATGTGGATGCAGCTAG+TGG | + | chr3_1:63795038-63795057 | Msa0367860:CDS | 45.0% | |
| ! | GGTCTTGTCTATGCTGGAAT+TGG | + | chr3_1:63795152-63795171 | Msa0367860:CDS | 45.0% |
| CTGGAATTGGTTGGGCTATT+TGG | + | chr3_1:63795165-63795184 | Msa0367860:CDS | 45.0% | |
| TTGGGCTATTTGGAGAAGCA+AGG | + | chr3_1:63795175-63795194 | Msa0367860:CDS | 45.0% | |
| GAGAAGTTGAGGGTAAAGGT+AGG | - | chr3_1:63795254-63795273 | None:intergenic | 45.0% | |
| ! | TAGATCCACAAAAGTGCACG+GGG | - | chr3_1:63795330-63795349 | None:intergenic | 45.0% |
| ! | CTAGATCCACAAAAGTGCAC+GGG | - | chr3_1:63795331-63795350 | None:intergenic | 45.0% |
| ! | GCTAGATCCACAAAAGTGCA+CGG | - | chr3_1:63795332-63795351 | None:intergenic | 45.0% |
| ATGTGCCATAGTCGTGTGAT+CGG | + | chr3_1:63795356-63795375 | Msa0367860:intron | 45.0% | |
| TAGTTCCGATCACACGACTA+TGG | - | chr3_1:63795364-63795383 | None:intergenic | 45.0% | |
| TTCCCCGCAATCAAGAAATC+TGG | - | chr3_1:63795480-63795499 | None:intergenic | 45.0% | |
| TTCAATGTGAAGGCCACCAA+AGG | - | chr3_1:63795891-63795910 | None:intergenic | 45.0% | |
| ! | TTTGGTGGCCTTCACATTGA+AGG | + | chr3_1:63795890-63795909 | Msa0367860:CDS | 45.0% |
| TGTGTGGTCCTTCAATGTGA+AGG | - | chr3_1:63795901-63795920 | None:intergenic | 45.0% | |
| ACGGTTATGTGTTGAGCATC+CGG | - | chr3_1:63795996-63796015 | None:intergenic | 45.0% | |
| ! | CCGTTTTACGCGTTGTCATT+AGG | + | chr3_1:63796012-63796031 | Msa0367860:CDS | 45.0% |
| TTTACGCGTTGTCATTAGGG+AGG | + | chr3_1:63796016-63796035 | Msa0367860:CDS | 45.0% | |
| AGCTTGATTCACTTACTGCG+AGG | + | chr3_1:63796096-63796115 | Msa0367860:CDS | 45.0% | |
| !!! | CAATTTTTTAATTTTAAAAA+AGG | - | chr3_1:63791086-63791105 | None:intergenic | 5.0% |
| !!! | AATTTTATTTTAGAATTAAT+TGG | - | chr3_1:63791471-63791490 | None:intergenic | 5.0% |
| !! | ATAAAATAAATATAGAAAAA+GGG | - | chr3_1:63792322-63792341 | None:intergenic | 5.0% |
| !! | AATAAAATAAATATAGAAAA+AGG | - | chr3_1:63792323-63792342 | None:intergenic | 5.0% |
| !!! | ATTTTACAAAAAAAAAAAAT+TGG | + | chr3_1:63792865-63792884 | Msa0367860:intron | 5.0% |
| !! | ACAAAATAAAAAATATTTAT+CGG | + | chr3_1:63793703-63793722 | Msa0367860:intron | 5.0% |
| CATCATCACCACCATCACCA+TGG | + | chr3_1:63790137-63790156 | Msa0367860:exon | 50.0% | |
| !! | AGAGAGAACCATGGTGATGG+TGG | - | chr3_1:63790148-63790167 | None:intergenic | 50.0% |
| GGAAGCAAAGGTTGAGTGGA+CGG | - | chr3_1:63790196-63790215 | None:intergenic | 50.0% | |
| ! | TCTGACATAGCGGGAAGCAA+AGG | - | chr3_1:63790208-63790227 | None:intergenic | 50.0% |
| AGGGTATACCTGTAGCTCAG+TGG | - | chr3_1:63790759-63790778 | None:intergenic | 50.0% | |
| TGACAAGGTGACATGTGTCC+AGG | - | chr3_1:63792691-63792710 | None:intergenic | 50.0% | |
| AGGGGACATGTGTCAACTCT+AGG | - | chr3_1:63792822-63792841 | None:intergenic | 50.0% | |
| GACACATGTCCCCTTGTCAT+TGG | + | chr3_1:63792828-63792847 | Msa0367860:intron | 50.0% | |
| !! | TGTCCCCTTGTCATTGGTTC+TGG | + | chr3_1:63792834-63792853 | Msa0367860:intron | 50.0% |
| !! | GTCCCCTTGTCATTGGTTCT+GGG | + | chr3_1:63792835-63792854 | Msa0367860:intron | 50.0% |
| GACACGTGTCACCTTGTCAT+TGG | - | chr3_1:63792907-63792926 | None:intergenic | 50.0% | |
| !! | GATGCCACTGTTAGCTTTGG+AGG | + | chr3_1:63794245-63794264 | Msa0367860:intron | 50.0% |
| GAGACCTCCAAAGCTAACAG+TGG | - | chr3_1:63794252-63794271 | None:intergenic | 50.0% | |
| ! | AATGAGGCTGCAGTTGGTGT+TGG | + | chr3_1:63794473-63794492 | Msa0367860:CDS | 50.0% |
| AATGGACCCTCAAAAGGCTG+TGG | + | chr3_1:63794783-63794802 | Msa0367860:CDS | 50.0% | |
| CCCTCAAAAGGCTGTGGAAT+TGG | + | chr3_1:63794789-63794808 | Msa0367860:CDS | 50.0% | |
| GTGGGATTTCCGCTTACCAT+TGG | + | chr3_1:63795097-63795116 | Msa0367860:CDS | 50.0% | |
| ! | ACAAACCCCGTGCACTTTTG+TGG | + | chr3_1:63795322-63795341 | Msa0367860:intron | 50.0% |
| GAAAGACGACGGTGTACCTT+TGG | + | chr3_1:63795872-63795891 | Msa0367860:CDS | 50.0% | |
| GTTATGTGTTGAGCATCCGG+TGG | - | chr3_1:63795993-63796012 | None:intergenic | 50.0% | |
| GGCCGTCTTAGAGAGAACCA+TGG | - | chr3_1:63790157-63790176 | None:intergenic | 55.0% | |
| GACGGAGACATCAGACTCAG+AGG | - | chr3_1:63790178-63790197 | None:intergenic | 55.0% | |
| AGCGGGAAGCAAAGGTTGAG+TGG | - | chr3_1:63790200-63790219 | None:intergenic | 55.0% | |
| CCTGTAGCTCAGTGGTGACA+GGG | - | chr3_1:63790751-63790770 | None:intergenic | 55.0% | |
| ACCTGTAGCTCAGTGGTGAC+AGG | - | chr3_1:63790752-63790771 | None:intergenic | 55.0% | |
| !! | GACACGTGTCGCTTTGTCGT+TGG | - | chr3_1:63792800-63792819 | None:intergenic | 55.0% |
| !! | GCAGTTGGTGTTGGCACTGT+TGG | + | chr3_1:63794482-63794501 | Msa0367860:CDS | 55.0% |
| !! | TGGCACTGTTGGCTCATCAG+AGG | + | chr3_1:63794493-63794512 | Msa0367860:CDS | 55.0% |
| TGTCACTGGAGCCAATGTCC+AGG | + | chr3_1:63794601-63794620 | Msa0367860:CDS | 55.0% | |
| CATGTGGATGCAGCTAGTGG+TGG | + | chr3_1:63795041-63795060 | Msa0367860:CDS | 55.0% | |
| CGGAAATCCCACTCGAGTTC+TGG | - | chr3_1:63795089-63795108 | None:intergenic | 55.0% | |
| AGACGACGGTGTACCTTTGG+TGG | + | chr3_1:63795875-63795894 | Msa0367860:CDS | 55.0% | |
| !! | TCCGACTTGTTGAGGCGCTT+CGG | + | chr3_1:63795942-63795961 | Msa0367860:CDS | 55.0% |
| ! | TCCGAAGCGCCTCAACAAGT+CGG | - | chr3_1:63795946-63795965 | None:intergenic | 55.0% |
| ! | ACTTGTTGAGGCGCTTCGGA+TGG | + | chr3_1:63795946-63795965 | Msa0367860:CDS | 55.0% |
| TCCAGCATACAGCATGCCAC+CGG | + | chr3_1:63795974-63795993 | Msa0367860:CDS | 55.0% | |
| CCCTGTCACCACTGAGCTAC+AGG | + | chr3_1:63790748-63790767 | Msa0367860:CDS | 60.0% | |
| GGTGGTCAGGGTTTGAACCC+TGG | - | chr3_1:63791582-63791601 | None:intergenic | 60.0% | |
| TCCGGTGGCATGCTGTATGC+TGG | - | chr3_1:63795978-63795997 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 63790072 | 63796539 | 63790072 | ID=Msa0367860;Name=Msa0367860 |
| chr3_1 | mRNA | 63790072 | 63796539 | 63790072 | ID=Msa0367860-mRNA-1;Parent=Msa0367860;Name=Msa0367860-mRNA-1;_AED=0.05;_eAED=0.05;_QI=84|1|1|1|1|1|7|244|508 |
| chr3_1 | exon | 63790072 | 63790241 | 63790072 | ID=Msa0367860-mRNA-1:exon:12698;Parent=Msa0367860-mRNA-1 |
| chr3_1 | exon | 63790565 | 63790769 | 63790565 | ID=Msa0367860-mRNA-1:exon:12699;Parent=Msa0367860-mRNA-1 |
| chr3_1 | exon | 63794422 | 63794622 | 63794422 | ID=Msa0367860-mRNA-1:exon:12700;Parent=Msa0367860-mRNA-1 |
| chr3_1 | exon | 63794709 | 63794923 | 63794709 | ID=Msa0367860-mRNA-1:exon:12701;Parent=Msa0367860-mRNA-1 |
| chr3_1 | exon | 63795025 | 63795278 | 63795025 | ID=Msa0367860-mRNA-1:exon:12702;Parent=Msa0367860-mRNA-1 |
| chr3_1 | exon | 63795604 | 63795656 | 63795604 | ID=Msa0367860-mRNA-1:exon:12703;Parent=Msa0367860-mRNA-1 |
| chr3_1 | exon | 63795783 | 63796539 | 63795783 | ID=Msa0367860-mRNA-1:exon:12704;Parent=Msa0367860-mRNA-1 |
| chr3_1 | five_prime_UTR | 63790072 | 63790155 | 63790072 | ID=Msa0367860-mRNA-1:five_prime_utr;Parent=Msa0367860-mRNA-1 |
| chr3_1 | CDS | 63790156 | 63790241 | 63790156 | ID=Msa0367860-mRNA-1:cds;Parent=Msa0367860-mRNA-1 |
| chr3_1 | CDS | 63790565 | 63790769 | 63790565 | ID=Msa0367860-mRNA-1:cds;Parent=Msa0367860-mRNA-1 |
| chr3_1 | CDS | 63794422 | 63794622 | 63794422 | ID=Msa0367860-mRNA-1:cds;Parent=Msa0367860-mRNA-1 |
| chr3_1 | CDS | 63794709 | 63794923 | 63794709 | ID=Msa0367860-mRNA-1:cds;Parent=Msa0367860-mRNA-1 |
| chr3_1 | CDS | 63795025 | 63795278 | 63795025 | ID=Msa0367860-mRNA-1:cds;Parent=Msa0367860-mRNA-1 |
| chr3_1 | CDS | 63795604 | 63795656 | 63795604 | ID=Msa0367860-mRNA-1:cds;Parent=Msa0367860-mRNA-1 |
| chr3_1 | CDS | 63795783 | 63796295 | 63795783 | ID=Msa0367860-mRNA-1:cds;Parent=Msa0367860-mRNA-1 |
| chr3_1 | three_prime_UTR | 63796296 | 63796539 | 63796296 | ID=Msa0367860-mRNA-1:three_prime_utr;Parent=Msa0367860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
