Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602070 | XP_003606402.1 | 99.344 | 305 | 2 | 0 | 86 | 390 | 91 | 395 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092220 | Msa0602070 | 0.800906 | 1.156596e-48 | -8.615850e-47 |
| Msa0173250 | Msa0602070 | 0.801611 | 8.299928e-49 | -8.615850e-47 |
| Msa0547340 | Msa0602070 | 0.977334 | 1.422959e-143 | -8.615850e-47 |
| Msa0566930 | Msa0602070 | 0.802581 | 5.242230e-49 | -8.615850e-47 |
| Msa0602050 | Msa0602070 | 0.814629 | 1.397617e-51 | -8.615850e-47 |
| Msa0602070 | Msa0643200 | 0.940633 | 1.671907e-100 | -8.615850e-47 |
| Msa0602070 | Msa0682860 | 0.944888 | 8.504859e-104 | -8.615850e-47 |
| Msa0602070 | Msa0689830 | 0.833454 | 5.283419e-56 | -8.615850e-47 |
| Msa0602070 | Msa1124210 | 0.824229 | 9.036669e-54 | -8.615850e-47 |
| Msa0602070 | Msa1402010 | 0.808860 | 2.516038e-50 | -8.615850e-47 |
| Msa0602070 | Msa1413190 | -0.800283 | 1.550206e-48 | -8.615850e-47 |
| Msa0602070 | Msa1429510 | -0.800507 | 1.395566e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602070 | MtrunA17_Chr4g0029291 | 99.344 | 305 | 2 | 0 | 86 | 390 | 91 | 395 | 0.0 | 618 |
| Msa0602070 | MtrunA17_Chr4g0029271 | 83.120 | 391 | 60 | 2 | 1 | 390 | 1 | 386 | 0.0 | 596 |
| Msa0602070 | MtrunA17_Chr2g0318341 | 47.222 | 288 | 145 | 4 | 107 | 390 | 38 | 322 | 1.40e-96 | 291 |
| Msa0602070 | MtrunA17_Chr2g0318311 | 47.569 | 288 | 144 | 4 | 107 | 390 | 38 | 322 | 3.77e-96 | 290 |
| Msa0602070 | MtrunA17_Chr8g0360691 | 46.520 | 273 | 141 | 3 | 107 | 377 | 38 | 307 | 1.78e-88 | 271 |
| Msa0602070 | MtrunA17_Chr2g0292811 | 42.537 | 268 | 135 | 3 | 110 | 377 | 46 | 294 | 2.58e-76 | 239 |
| Msa0602070 | MtrunA17_Chr2g0287361 | 40.138 | 289 | 150 | 5 | 93 | 377 | 26 | 295 | 8.52e-76 | 238 |
| Msa0602070 | MtrunA17_Chr2g0292801 | 43.657 | 268 | 132 | 3 | 110 | 377 | 309 | 557 | 6.12e-75 | 243 |
| Msa0602070 | MtrunA17_Chr2g0292821 | 43.284 | 268 | 133 | 3 | 110 | 377 | 309 | 557 | 1.18e-73 | 240 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602070 | AT5G60530.1 | 68.136 | 295 | 92 | 2 | 86 | 378 | 135 | 429 | 1.90e-157 | 451 |
| Msa0602070 | AT5G60520.1 | 68.182 | 308 | 97 | 1 | 72 | 378 | 21 | 328 | 1.43e-153 | 437 |
| Msa0602070 | AT4G27400.1 | 44.561 | 285 | 152 | 4 | 106 | 387 | 35 | 316 | 1.51e-91 | 279 |
| Msa0602070 | AT5G54370.1 | 43.243 | 296 | 159 | 5 | 95 | 387 | 20 | 309 | 1.32e-89 | 274 |
| Msa0602070 | AT1G54890.1 | 43.403 | 288 | 156 | 5 | 95 | 377 | 26 | 311 | 2.57e-86 | 266 |
| Msa0602070 | AT3G19430.1 | 43.310 | 284 | 143 | 5 | 97 | 377 | 258 | 526 | 5.17e-77 | 248 |
| Msa0602070 | AT3G19430.2 | 43.310 | 284 | 143 | 5 | 97 | 377 | 281 | 549 | 7.19e-77 | 248 |
Find 106 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACTCTCTTACAGTAAAA+TGG | 0.185746 | 4_2:+45299028 | Msa0602070:CDS |
| TTATCCTTCTTGTTCTTCTT+TGG | 0.195002 | 4_2:-45298242 | None:intergenic |
| GAATTCATCGTCTGAAACTA+TGG | 0.242755 | 4_2:-45298866 | None:intergenic |
| TTTCCACAATCACTTCTCTT+TGG | 0.271483 | 4_2:-45299110 | None:intergenic |
| AGTGTTAGAGTGACAGTTTC+CGG | 0.303767 | 4_2:+45299150 | Msa0602070:CDS |
| TTCCTTTGTTTACACTCTTC+CGG | 0.316690 | 4_2:-45298218 | None:intergenic |
| CGATGAAGTGTGCGTTGATT+TGG | 0.331268 | 4_2:-45298888 | None:intergenic |
| AGGCAAAGGAAAGGGGAAAA+AGG | 0.348798 | 4_2:+45298091 | Msa0602070:CDS |
| CATTGCCATTACCATTTCCT+TGG | 0.358834 | 4_2:-45297944 | None:intergenic |
| TATGGCGAAGTTTCCTCCTT+TGG | 0.367101 | 4_2:-45298848 | None:intergenic |
| ATTCCATTGAGTTACTCTAT+TGG | 0.373593 | 4_2:-45298998 | None:intergenic |
| TTGAAAAGAGTGATGGAGTT+TGG | 0.380596 | 4_2:-45299401 | None:intergenic |
| AGTTTCCGGTTTGCTTGAAA+TGG | 0.381253 | 4_2:+45299164 | Msa0602070:CDS |
| GAACCATAGCCATCACAATT+TGG | 0.391798 | 4_2:-45298766 | None:intergenic |
| GACATAAGGGTAAGGCCTAT+TGG | 0.392194 | 4_2:+45299186 | Msa0602070:CDS |
| AATCCTACAGATTCTATTGA+AGG | 0.405188 | 4_2:+45299291 | Msa0602070:CDS |
| AAAGACAAAGGCAAAGGAAA+GGG | 0.406086 | 4_2:+45298083 | Msa0602070:CDS |
| AAGAAGAACAAGAAGGATAA+AGG | 0.412069 | 4_2:+45298245 | Msa0602070:CDS |
| TTTCAAGACACTTGTGTGTC+CGG | 0.420772 | 4_2:+45298199 | Msa0602070:CDS |
| CTTGGCTAGTGGAAGGCCTC+TGG | 0.433828 | 4_2:-45299446 | None:intergenic |
| CTTCATCGGTACTCGACCTC+AGG | 0.443542 | 4_2:+45298903 | Msa0602070:CDS |
| GGTAAGGCCTATTGGAGAAA+AGG | 0.448306 | 4_2:+45299194 | Msa0602070:CDS |
| GTTTGCTTGAAATGGACATA+AGG | 0.452921 | 4_2:+45299172 | Msa0602070:CDS |
| CAACAACATGCAAACTCTGC+AGG | 0.455560 | 4_2:+45299421 | Msa0602070:CDS |
| AAGCTTGCCAGCTCTTCAAT+CGG | 0.459439 | 4_2:+45298136 | Msa0602070:CDS |
| AAGCATCATCTGATGGCAAT+TGG | 0.461439 | 4_2:-45299236 | None:intergenic |
| TCCTGTCCCGATTGAAGAGC+TGG | 0.462032 | 4_2:-45298143 | None:intergenic |
| TGACTCTCTTACAGTAAAAT+GGG | 0.465803 | 4_2:+45299029 | Msa0602070:CDS |
| CGGTAACAATGGCAACGGTA+AGG | 0.466846 | 4_2:+45298007 | Msa0602070:CDS |
| ATTGCTCAAGGCCAAGGAAA+TGG | 0.467146 | 4_2:+45297933 | Msa0602070:CDS |
| TATGTCCATTTCAAGCAAAC+CGG | 0.477542 | 4_2:-45299169 | None:intergenic |
| AGGCGTTGCTATGCCGATGA+TGG | 0.478306 | 4_2:+45299362 | Msa0602070:CDS |
| AGTTTCCTCCTTTGGCTCCA+TGG | 0.483265 | 4_2:-45298840 | None:intergenic |
| TTTGCTTGAAATGGACATAA+GGG | 0.483863 | 4_2:+45299173 | Msa0602070:CDS |
| TACGATCCTCGCTTTGTTGG+TGG | 0.487215 | 4_2:+45298796 | Msa0602070:CDS |
| TTAGTAACTATTCCTTCTGA+TGG | 0.487513 | 4_2:+45299060 | Msa0602070:CDS |
| TGTTACGATCCTCGCTTTGT+TGG | 0.488383 | 4_2:+45298793 | Msa0602070:CDS |
| AGAGAGTTCACCAAGATGGC+TGG | 0.489242 | 4_2:+45297852 | None:intergenic |
| AGCTTGCCAGCTCTTCAATC+GGG | 0.489857 | 4_2:+45298137 | Msa0602070:CDS |
| GTTGCCACTTGACTTCCATT+CGG | 0.489934 | 4_2:-45299088 | None:intergenic |
| GGTAACAATGGCAACGGTAA+TGG | 0.490289 | 4_2:+45297978 | Msa0602070:CDS |
| CCTCGCTTTGTTGGTGGTGA+CGG | 0.491282 | 4_2:+45298802 | Msa0602070:CDS |
| AGCAATTAGTCCTTGGCTAG+TGG | 0.496547 | 4_2:-45299457 | None:intergenic |
| CATGTTGTTGAAAAGAGTGA+TGG | 0.501148 | 4_2:-45299408 | None:intergenic |
| ATAGCAACGCCTCTCTTGAC+AGG | 0.501342 | 4_2:-45299351 | None:intergenic |
| AGTATTGAGCAATTAGTCCT+TGG | 0.501765 | 4_2:-45299464 | None:intergenic |
| CAAAGACAAAGGCAAAGGAA+AGG | 0.504829 | 4_2:+45298082 | Msa0602070:CDS |
| GCCAGCTCTTCAATCGGGAC+AGG | 0.506018 | 4_2:+45298142 | Msa0602070:CDS |
| TTGTCTTCCCCTCCCATCAT+CGG | 0.516690 | 4_2:-45299375 | None:intergenic |
| TGCTATGCCGATGATGGGAG+GGG | 0.520495 | 4_2:+45299368 | Msa0602070:CDS |
| TTGACAGGACTAACATAACT+TGG | 0.528654 | 4_2:-45299336 | None:intergenic |
| TTCTACTTCCATGGAGCCAA+AGG | 0.530261 | 4_2:+45298832 | Msa0602070:CDS |
| CAGCCAATAGAGTAACTCAA+TGG | 0.535035 | 4_2:+45298995 | Msa0602070:CDS |
| CAAGGCCAAGGAAATGGTAA+TGG | 0.535225 | 4_2:+45297939 | Msa0602070:CDS |
| GCTGTCATTGCTCAAGGCCA+AGG | 0.536607 | 4_2:+45297927 | Msa0602070:CDS |
| CAACGGTAAGGGAAATGATA+AGG | 0.536819 | 4_2:+45298019 | Msa0602070:CDS |
| CCAAGATGGCTGGAAGAAAG+TGG | 0.542641 | 4_2:+45297862 | None:intergenic |
| AATGGCAATGGCAATGATAA+CGG | 0.544965 | 4_2:+45297957 | Msa0602070:CDS |
| GGCGTTGCTATGCCGATGAT+GGG | 0.546171 | 4_2:+45299363 | Msa0602070:CDS |
| TTGCTATGCCGATGATGGGA+GGG | 0.557875 | 4_2:+45299367 | Msa0602070:CDS |
| AGACCAAATTGTGATGGCTA+TGG | 0.559492 | 4_2:+45298763 | Msa0602070:CDS |
| AAGACAAAGGCAAAGGAAAG+GGG | 0.568570 | 4_2:+45298084 | Msa0602070:CDS |
| GGTAACAATGGCAACGGTAA+GGG | 0.569494 | 4_2:+45298008 | Msa0602070:CDS |
| CAAATCAACGCACACTTCAT+CGG | 0.574077 | 4_2:+45298889 | Msa0602070:CDS |
| GCAAACTCTGCAGGTTCCAG+AGG | 0.576301 | 4_2:+45299430 | Msa0602070:CDS |
| ATGGAAGCTGTCATTGCTCA+AGG | 0.577049 | 4_2:+45297921 | Msa0602070:CDS |
| AAGAAAGTGGAGCATCTTGG+TGG | 0.578600 | 4_2:+45297875 | Msa0602070:CDS |
| GAAGGACTCGCGATTACACA+TGG | 0.579448 | 4_2:+45298926 | Msa0602070:CDS |
| TGTGAACTTACACTTGCAAG+TGG | 0.579594 | 4_2:-45298297 | None:intergenic |
| GACAAAGACGACAAAGACAA+AGG | 0.583327 | 4_2:+45298071 | Msa0602070:CDS |
| CAAGGAAATGGTAATGGCAA+TGG | 0.586689 | 4_2:+45297945 | Msa0602070:CDS |
| CAACCAAAGAGAAGTGATTG+TGG | 0.588758 | 4_2:+45299107 | Msa0602070:CDS |
| GGCAATGATAACGGTAACAA+TGG | 0.590008 | 4_2:+45297966 | Msa0602070:CDS |
| TGGAAGAAAGTGGAGCATCT+TGG | 0.590363 | 4_2:+45297872 | Msa0602070:CDS |
| TTGAAATGGACATAAGGGTA+AGG | 0.592556 | 4_2:+45299178 | Msa0602070:CDS |
| GGTGTGATGTTCTACTTCCA+TGG | 0.592688 | 4_2:+45298823 | Msa0602070:CDS |
| GACGACAAAGACAAAGGCAA+AGG | 0.593756 | 4_2:+45298077 | Msa0602070:CDS |
| CTTCAATCGGGACAGGAACG+AGG | 0.594901 | 4_2:+45298149 | Msa0602070:CDS |
| ACTCCTTCAATAGAATCTGT+AGG | 0.597663 | 4_2:-45299294 | None:intergenic |
| GAAGCCAAAGAAGAACAAGA+AGG | 0.599717 | 4_2:+45298238 | Msa0602070:CDS |
| CATTCGGCATCTCCATCAGA+AGG | 0.601517 | 4_2:-45299072 | None:intergenic |
| CTTCTGATGGAGATGCCGAA+TGG | 0.602970 | 4_2:+45299073 | Msa0602070:CDS |
| AATGGTAACAACGGTAACAA+TGG | 0.605001 | 4_2:+45297996 | Msa0602070:CDS |
| GTTAGAAGACCAAATTGTGA+TGG | 0.607905 | 4_2:+45298757 | Msa0602070:intron |
| TGAGCAAAAGCATCATCTGA+TGG | 0.608641 | 4_2:-45299243 | None:intergenic |
| AAATGATAAGGACGAAGGCA+AGG | 0.611935 | 4_2:+45298031 | Msa0602070:CDS |
| CAGAGGCCTTCCACTAGCCA+AGG | 0.613753 | 4_2:+45299447 | Msa0602070:CDS |
| GTTGCTATGCCGATGATGGG+AGG | 0.614523 | 4_2:+45299366 | Msa0602070:CDS |
| TACTTCCATGGAGCCAAAGG+AGG | 0.618849 | 4_2:+45298835 | Msa0602070:CDS |
| ATTAGTCCTTGGCTAGTGGA+AGG | 0.619757 | 4_2:-45299453 | None:intergenic |
| AAGGACGAAGGCAAGGACAA+AGG | 0.625848 | 4_2:+45298038 | Msa0602070:CDS |
| GATAACGGTAACAATGGCAA+CGG | 0.627056 | 4_2:+45297972 | Msa0602070:CDS |
| AACAACGGTAACAATGGCAA+CGG | 0.628721 | 4_2:+45298002 | Msa0602070:CDS |
| TTCATCGGTACTCGACCTCA+GGG | 0.629361 | 4_2:+45298904 | Msa0602070:CDS |
| TATTGGAGAAAAGGAAAACA+AGG | 0.632095 | 4_2:+45299203 | Msa0602070:CDS |
| TATGTTAGTCCTGTCAAGAG+AGG | 0.633793 | 4_2:+45299342 | Msa0602070:CDS |
| GGCAACGGTAATGGTAACAA+CGG | 0.636737 | 4_2:+45297987 | Msa0602070:CDS |
| TCGGTACTCGACCTCAGGGA+AGG | 0.642030 | 4_2:+45298908 | Msa0602070:CDS |
| TTCAATCGGGACAGGAACGA+GGG | 0.650568 | 4_2:+45298150 | Msa0602070:CDS |
| TCTCTTACAGTAAAATGGGA+CGG | 0.652194 | 4_2:+45299033 | Msa0602070:CDS |
| CCGTCACCACCAACAAAGCG+AGG | 0.670633 | 4_2:-45298802 | None:intergenic |
| GATGCCGAATGGAAGTCAAG+TGG | 0.682123 | 4_2:+45299084 | Msa0602070:CDS |
| AAGGGAAATGATAAGGACGA+AGG | 0.689947 | 4_2:+45298026 | Msa0602070:CDS |
| TAATCGCGAGTCCTTCCCTG+AGG | 0.723910 | 4_2:-45298919 | None:intergenic |
| AAGGACTCGCGATTACACAT+GGG | 0.725962 | 4_2:+45298927 | Msa0602070:CDS |
| GTCCGGAAGAGTGTAAACAA+AGG | 0.729113 | 4_2:+45298216 | Msa0602070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCTATCTATATTTATATT+TGG | + | chr4_2:45298318-45298337 | Msa0602070:intron | 15.0% |
| !!! | TGTATATAAGAAGTATTAAA+TGG | - | chr4_2:45298555-45298574 | None:intergenic | 15.0% |
| !! | CATCTATCTATATTTATATT+TGG | + | chr4_2:45298318-45298337 | Msa0602070:intron | 15.0% |
| !!! | TGTATATAAGAAGTATTAAA+TGG | - | chr4_2:45298555-45298574 | None:intergenic | 15.0% |
| !! | ATTTAATTAGATATGATTGC+AGG | + | chr4_2:45298584-45298603 | Msa0602070:intron | 20.0% |
| !!! | ACAGTGTAAATTTTATTAAG+TGG | + | chr4_2:45298638-45298657 | Msa0602070:intron | 20.0% |
| !! | ATTTAATTAGATATGATTGC+AGG | + | chr4_2:45298584-45298603 | Msa0602070:intron | 20.0% |
| !!! | ACAGTGTAAATTTTATTAAG+TGG | + | chr4_2:45298638-45298657 | Msa0602070:intron | 20.0% |
| ! | AGAGATGAGTAAGATAAAAA+AGG | - | chr4_2:45297901-45297920 | None:intergenic | 25.0% |
| !! | TTTTATCTTACTCATCTCTA+TGG | + | chr4_2:45297902-45297921 | Msa0602070:CDS | 25.0% |
| !! | ATGTAGATTTTGTCTATGAT+AGG | + | chr4_2:45298502-45298521 | Msa0602070:intron | 25.0% |
| !! | TGTAGATTTTGTCTATGATA+GGG | + | chr4_2:45298503-45298522 | Msa0602070:intron | 25.0% |
| ! | TATGAAATCTGATTAGACAA+CGG | + | chr4_2:45298667-45298686 | Msa0602070:intron | 25.0% |
| ! | AGAGATGAGTAAGATAAAAA+AGG | - | chr4_2:45297901-45297920 | None:intergenic | 25.0% |
| !! | TTTTATCTTACTCATCTCTA+TGG | + | chr4_2:45297902-45297921 | Msa0602070:CDS | 25.0% |
| !! | ATGTAGATTTTGTCTATGAT+AGG | + | chr4_2:45298502-45298521 | Msa0602070:intron | 25.0% |
| !! | TGTAGATTTTGTCTATGATA+GGG | + | chr4_2:45298503-45298522 | Msa0602070:intron | 25.0% |
| ! | TATGAAATCTGATTAGACAA+CGG | + | chr4_2:45298667-45298686 | Msa0602070:intron | 25.0% |
| ! | AATGACAAGTATTTTGTGCT+TGG | - | chr4_2:45298181-45298200 | None:intergenic | 30.0% |
| TTATCCTTCTTGTTCTTCTT+TGG | - | chr4_2:45298245-45298264 | None:intergenic | 30.0% | |
| AAGAAGAACAAGAAGGATAA+AGG | + | chr4_2:45298245-45298264 | Msa0602070:CDS | 30.0% | |
| TAATACTTGATCTATACCGT+TGG | + | chr4_2:45298351-45298370 | Msa0602070:intron | 30.0% | |
| ! | CATGGTCCAACTTTATATTT+TGG | + | chr4_2:45298391-45298410 | Msa0602070:intron | 30.0% |
| TCAGGTCCAAAATATAAAGT+TGG | - | chr4_2:45298400-45298419 | None:intergenic | 30.0% | |
| TGGATCATCATAAGATAAGA+TGG | - | chr4_2:45298433-45298452 | None:intergenic | 30.0% | |
| ATTCCATTGAGTTACTCTAT+TGG | - | chr4_2:45299001-45299020 | None:intergenic | 30.0% | |
| TTGACTCTCTTACAGTAAAA+TGG | + | chr4_2:45299028-45299047 | Msa0602070:CDS | 30.0% | |
| TGACTCTCTTACAGTAAAAT+GGG | + | chr4_2:45299029-45299048 | Msa0602070:CDS | 30.0% | |
| TTAGTAACTATTCCTTCTGA+TGG | + | chr4_2:45299060-45299079 | Msa0602070:CDS | 30.0% | |
| TTTGCTTGAAATGGACATAA+GGG | + | chr4_2:45299173-45299192 | Msa0602070:CDS | 30.0% | |
| ! | TTGTTTTCCTTTTCTCCAAT+AGG | - | chr4_2:45299204-45299223 | None:intergenic | 30.0% |
| TATTGGAGAAAAGGAAAACA+AGG | + | chr4_2:45299203-45299222 | Msa0602070:CDS | 30.0% | |
| AATCCTACAGATTCTATTGA+AGG | + | chr4_2:45299291-45299310 | Msa0602070:CDS | 30.0% | |
| ! | GATTCTATTGAAGGAGTTTT+AGG | + | chr4_2:45299300-45299319 | Msa0602070:CDS | 30.0% |
| !!! | GAGTTTTAGGTCAAACTTAT+AGG | + | chr4_2:45299313-45299332 | Msa0602070:CDS | 30.0% |
| ! | AATGACAAGTATTTTGTGCT+TGG | - | chr4_2:45298181-45298200 | None:intergenic | 30.0% |
| TTATCCTTCTTGTTCTTCTT+TGG | - | chr4_2:45298245-45298264 | None:intergenic | 30.0% | |
| AAGAAGAACAAGAAGGATAA+AGG | + | chr4_2:45298245-45298264 | Msa0602070:CDS | 30.0% | |
| TAATACTTGATCTATACCGT+TGG | + | chr4_2:45298351-45298370 | Msa0602070:intron | 30.0% | |
| ! | CATGGTCCAACTTTATATTT+TGG | + | chr4_2:45298391-45298410 | Msa0602070:intron | 30.0% |
| TCAGGTCCAAAATATAAAGT+TGG | - | chr4_2:45298400-45298419 | None:intergenic | 30.0% | |
| TGGATCATCATAAGATAAGA+TGG | - | chr4_2:45298433-45298452 | None:intergenic | 30.0% | |
| ATTCCATTGAGTTACTCTAT+TGG | - | chr4_2:45299001-45299020 | None:intergenic | 30.0% | |
| TTGACTCTCTTACAGTAAAA+TGG | + | chr4_2:45299028-45299047 | Msa0602070:CDS | 30.0% | |
| TGACTCTCTTACAGTAAAAT+GGG | + | chr4_2:45299029-45299048 | Msa0602070:CDS | 30.0% | |
| TTAGTAACTATTCCTTCTGA+TGG | + | chr4_2:45299060-45299079 | Msa0602070:CDS | 30.0% | |
| TTTGCTTGAAATGGACATAA+GGG | + | chr4_2:45299173-45299192 | Msa0602070:CDS | 30.0% | |
| ! | TTGTTTTCCTTTTCTCCAAT+AGG | - | chr4_2:45299204-45299223 | None:intergenic | 30.0% |
| TATTGGAGAAAAGGAAAACA+AGG | + | chr4_2:45299203-45299222 | Msa0602070:CDS | 30.0% | |
| AATCCTACAGATTCTATTGA+AGG | + | chr4_2:45299291-45299310 | Msa0602070:CDS | 30.0% | |
| ! | GATTCTATTGAAGGAGTTTT+AGG | + | chr4_2:45299300-45299319 | Msa0602070:CDS | 30.0% |
| !!! | GAGTTTTAGGTCAAACTTAT+AGG | + | chr4_2:45299313-45299332 | Msa0602070:CDS | 30.0% |
| AATGGCAATGGCAATGATAA+CGG | + | chr4_2:45297957-45297976 | Msa0602070:CDS | 35.0% | |
| AATGGTAACAACGGTAACAA+TGG | + | chr4_2:45297996-45298015 | Msa0602070:CDS | 35.0% | |
| AAAGACAAAGGCAAAGGAAA+GGG | + | chr4_2:45298083-45298102 | Msa0602070:CDS | 35.0% | |
| ! | TGGCAAGCTTTCATATTTTG+AGG | - | chr4_2:45298126-45298145 | None:intergenic | 35.0% |
| ! | TTCCTTTGTTTACACTCTTC+CGG | - | chr4_2:45298221-45298240 | None:intergenic | 35.0% |
| ATCGTCTGATCTTAATCCAA+CGG | - | chr4_2:45298370-45298389 | None:intergenic | 35.0% | |
| !! | ATTAAATGGACTAGCATGAG+AGG | - | chr4_2:45298541-45298560 | None:intergenic | 35.0% |
| GTTAGAAGACCAAATTGTGA+TGG | + | chr4_2:45298757-45298776 | Msa0602070:intron | 35.0% | |
| ! | GAATTCATCGTCTGAAACTA+TGG | - | chr4_2:45298869-45298888 | None:intergenic | 35.0% |
| TCTCTTACAGTAAAATGGGA+CGG | + | chr4_2:45299033-45299052 | Msa0602070:CDS | 35.0% | |
| TTTCCACAATCACTTCTCTT+TGG | - | chr4_2:45299113-45299132 | None:intergenic | 35.0% | |
| TATGTCCATTTCAAGCAAAC+CGG | - | chr4_2:45299172-45299191 | None:intergenic | 35.0% | |
| GTTTGCTTGAAATGGACATA+AGG | + | chr4_2:45299172-45299191 | Msa0602070:CDS | 35.0% | |
| TTGAAATGGACATAAGGGTA+AGG | + | chr4_2:45299178-45299197 | Msa0602070:CDS | 35.0% | |
| ! | AGATGATGCTTTTGCTCATT+TGG | + | chr4_2:45299248-45299267 | Msa0602070:CDS | 35.0% |
| ACTCCTTCAATAGAATCTGT+AGG | - | chr4_2:45299297-45299316 | None:intergenic | 35.0% | |
| TTGACAGGACTAACATAACT+TGG | - | chr4_2:45299339-45299358 | None:intergenic | 35.0% | |
| ! | TTGAAAAGAGTGATGGAGTT+TGG | - | chr4_2:45299404-45299423 | None:intergenic | 35.0% |
| CATGTTGTTGAAAAGAGTGA+TGG | - | chr4_2:45299411-45299430 | None:intergenic | 35.0% | |
| ! | AGTATTGAGCAATTAGTCCT+TGG | - | chr4_2:45299467-45299486 | None:intergenic | 35.0% |
| AATGGCAATGGCAATGATAA+CGG | + | chr4_2:45297957-45297976 | Msa0602070:CDS | 35.0% | |
| AATGGTAACAACGGTAACAA+TGG | + | chr4_2:45297996-45298015 | Msa0602070:CDS | 35.0% | |
| AAAGACAAAGGCAAAGGAAA+GGG | + | chr4_2:45298083-45298102 | Msa0602070:CDS | 35.0% | |
| ! | TGGCAAGCTTTCATATTTTG+AGG | - | chr4_2:45298126-45298145 | None:intergenic | 35.0% |
| ! | TTCCTTTGTTTACACTCTTC+CGG | - | chr4_2:45298221-45298240 | None:intergenic | 35.0% |
| ATCGTCTGATCTTAATCCAA+CGG | - | chr4_2:45298370-45298389 | None:intergenic | 35.0% | |
| !! | ATTAAATGGACTAGCATGAG+AGG | - | chr4_2:45298541-45298560 | None:intergenic | 35.0% |
| GTTAGAAGACCAAATTGTGA+TGG | + | chr4_2:45298757-45298776 | Msa0602070:intron | 35.0% | |
| ! | GAATTCATCGTCTGAAACTA+TGG | - | chr4_2:45298869-45298888 | None:intergenic | 35.0% |
| TCTCTTACAGTAAAATGGGA+CGG | + | chr4_2:45299033-45299052 | Msa0602070:CDS | 35.0% | |
| TTTCCACAATCACTTCTCTT+TGG | - | chr4_2:45299113-45299132 | None:intergenic | 35.0% | |
| TATGTCCATTTCAAGCAAAC+CGG | - | chr4_2:45299172-45299191 | None:intergenic | 35.0% | |
| GTTTGCTTGAAATGGACATA+AGG | + | chr4_2:45299172-45299191 | Msa0602070:CDS | 35.0% | |
| TTGAAATGGACATAAGGGTA+AGG | + | chr4_2:45299178-45299197 | Msa0602070:CDS | 35.0% | |
| ! | AGATGATGCTTTTGCTCATT+TGG | + | chr4_2:45299248-45299267 | Msa0602070:CDS | 35.0% |
| ACTCCTTCAATAGAATCTGT+AGG | - | chr4_2:45299297-45299316 | None:intergenic | 35.0% | |
| TTGACAGGACTAACATAACT+TGG | - | chr4_2:45299339-45299358 | None:intergenic | 35.0% | |
| ! | TTGAAAAGAGTGATGGAGTT+TGG | - | chr4_2:45299404-45299423 | None:intergenic | 35.0% |
| CATGTTGTTGAAAAGAGTGA+TGG | - | chr4_2:45299411-45299430 | None:intergenic | 35.0% | |
| ! | AGTATTGAGCAATTAGTCCT+TGG | - | chr4_2:45299467-45299486 | None:intergenic | 35.0% |
| CATTGCCATTACCATTTCCT+TGG | - | chr4_2:45297947-45297966 | None:intergenic | 40.0% | |
| !! | CAAGGAAATGGTAATGGCAA+TGG | + | chr4_2:45297945-45297964 | Msa0602070:CDS | 40.0% |
| !! | GGCAATGATAACGGTAACAA+TGG | + | chr4_2:45297966-45297985 | Msa0602070:CDS | 40.0% |
| ! | GATAACGGTAACAATGGCAA+CGG | + | chr4_2:45297972-45297991 | Msa0602070:CDS | 40.0% |
| AACAACGGTAACAATGGCAA+CGG | + | chr4_2:45298002-45298021 | Msa0602070:CDS | 40.0% | |
| CAACGGTAAGGGAAATGATA+AGG | + | chr4_2:45298019-45298038 | Msa0602070:CDS | 40.0% | |
| AAGGGAAATGATAAGGACGA+AGG | + | chr4_2:45298026-45298045 | Msa0602070:CDS | 40.0% | |
| AAATGATAAGGACGAAGGCA+AGG | + | chr4_2:45298031-45298050 | Msa0602070:CDS | 40.0% | |
| GACAAAGACGACAAAGACAA+AGG | + | chr4_2:45298071-45298090 | Msa0602070:CDS | 40.0% | |
| CAAAGACAAAGGCAAAGGAA+AGG | + | chr4_2:45298082-45298101 | Msa0602070:CDS | 40.0% | |
| AAGACAAAGGCAAAGGAAAG+GGG | + | chr4_2:45298084-45298103 | Msa0602070:CDS | 40.0% | |
| TTTCAAGACACTTGTGTGTC+CGG | + | chr4_2:45298199-45298218 | Msa0602070:CDS | 40.0% | |
| GAAGCCAAAGAAGAACAAGA+AGG | + | chr4_2:45298238-45298257 | Msa0602070:CDS | 40.0% | |
| TGTGAACTTACACTTGCAAG+TGG | - | chr4_2:45298300-45298319 | None:intergenic | 40.0% | |
| GATTAAGATCAGACGATGCA+TGG | + | chr4_2:45298373-45298392 | Msa0602070:intron | 40.0% | |
| TAAGATGGCTCACATAAGTC+AGG | - | chr4_2:45298418-45298437 | None:intergenic | 40.0% | |
| AGACCAAATTGTGATGGCTA+TGG | + | chr4_2:45298763-45298782 | Msa0602070:CDS | 40.0% | |
| GAACCATAGCCATCACAATT+TGG | - | chr4_2:45298769-45298788 | None:intergenic | 40.0% | |
| CAAATCAACGCACACTTCAT+CGG | + | chr4_2:45298889-45298908 | Msa0602070:CDS | 40.0% | |
| CAGCCAATAGAGTAACTCAA+TGG | + | chr4_2:45298995-45299014 | Msa0602070:CDS | 40.0% | |
| CAACCAAAGAGAAGTGATTG+TGG | + | chr4_2:45299107-45299126 | Msa0602070:CDS | 40.0% | |
| AGTGTTAGAGTGACAGTTTC+CGG | + | chr4_2:45299150-45299169 | Msa0602070:CDS | 40.0% | |
| ! | AGTTTCCGGTTTGCTTGAAA+TGG | + | chr4_2:45299164-45299183 | Msa0602070:CDS | 40.0% |
| AAGCATCATCTGATGGCAAT+TGG | - | chr4_2:45299239-45299258 | None:intergenic | 40.0% | |
| !! | TGAGCAAAAGCATCATCTGA+TGG | - | chr4_2:45299246-45299265 | None:intergenic | 40.0% |
| TATGTTAGTCCTGTCAAGAG+AGG | + | chr4_2:45299342-45299361 | Msa0602070:CDS | 40.0% | |
| CATTGCCATTACCATTTCCT+TGG | - | chr4_2:45297947-45297966 | None:intergenic | 40.0% | |
| !! | CAAGGAAATGGTAATGGCAA+TGG | + | chr4_2:45297945-45297964 | Msa0602070:CDS | 40.0% |
| !! | GGCAATGATAACGGTAACAA+TGG | + | chr4_2:45297966-45297985 | Msa0602070:CDS | 40.0% |
| ! | GATAACGGTAACAATGGCAA+CGG | + | chr4_2:45297972-45297991 | Msa0602070:CDS | 40.0% |
| AACAACGGTAACAATGGCAA+CGG | + | chr4_2:45298002-45298021 | Msa0602070:CDS | 40.0% | |
| CAACGGTAAGGGAAATGATA+AGG | + | chr4_2:45298019-45298038 | Msa0602070:CDS | 40.0% | |
| AAGGGAAATGATAAGGACGA+AGG | + | chr4_2:45298026-45298045 | Msa0602070:CDS | 40.0% | |
| AAATGATAAGGACGAAGGCA+AGG | + | chr4_2:45298031-45298050 | Msa0602070:CDS | 40.0% | |
| GACAAAGACGACAAAGACAA+AGG | + | chr4_2:45298071-45298090 | Msa0602070:CDS | 40.0% | |
| CAAAGACAAAGGCAAAGGAA+AGG | + | chr4_2:45298082-45298101 | Msa0602070:CDS | 40.0% | |
| AAGACAAAGGCAAAGGAAAG+GGG | + | chr4_2:45298084-45298103 | Msa0602070:CDS | 40.0% | |
| TTTCAAGACACTTGTGTGTC+CGG | + | chr4_2:45298199-45298218 | Msa0602070:CDS | 40.0% | |
| GAAGCCAAAGAAGAACAAGA+AGG | + | chr4_2:45298238-45298257 | Msa0602070:CDS | 40.0% | |
| TGTGAACTTACACTTGCAAG+TGG | - | chr4_2:45298300-45298319 | None:intergenic | 40.0% | |
| GATTAAGATCAGACGATGCA+TGG | + | chr4_2:45298373-45298392 | Msa0602070:intron | 40.0% | |
| TAAGATGGCTCACATAAGTC+AGG | - | chr4_2:45298418-45298437 | None:intergenic | 40.0% | |
| AGACCAAATTGTGATGGCTA+TGG | + | chr4_2:45298763-45298782 | Msa0602070:CDS | 40.0% | |
| GAACCATAGCCATCACAATT+TGG | - | chr4_2:45298769-45298788 | None:intergenic | 40.0% | |
| CAAATCAACGCACACTTCAT+CGG | + | chr4_2:45298889-45298908 | Msa0602070:CDS | 40.0% | |
| CAGCCAATAGAGTAACTCAA+TGG | + | chr4_2:45298995-45299014 | Msa0602070:CDS | 40.0% | |
| CAACCAAAGAGAAGTGATTG+TGG | + | chr4_2:45299107-45299126 | Msa0602070:CDS | 40.0% | |
| AGTGTTAGAGTGACAGTTTC+CGG | + | chr4_2:45299150-45299169 | Msa0602070:CDS | 40.0% | |
| ! | AGTTTCCGGTTTGCTTGAAA+TGG | + | chr4_2:45299164-45299183 | Msa0602070:CDS | 40.0% |
| AAGCATCATCTGATGGCAAT+TGG | - | chr4_2:45299239-45299258 | None:intergenic | 40.0% | |
| !! | TGAGCAAAAGCATCATCTGA+TGG | - | chr4_2:45299246-45299265 | None:intergenic | 40.0% |
| TATGTTAGTCCTGTCAAGAG+AGG | + | chr4_2:45299342-45299361 | Msa0602070:CDS | 40.0% | |
| ! | TGGAAGAAAGTGGAGCATCT+TGG | + | chr4_2:45297872-45297891 | Msa0602070:CDS | 45.0% |
| ! | AAGAAAGTGGAGCATCTTGG+TGG | + | chr4_2:45297875-45297894 | Msa0602070:CDS | 45.0% |
| ATGGAAGCTGTCATTGCTCA+AGG | + | chr4_2:45297921-45297940 | Msa0602070:CDS | 45.0% | |
| ATTGCTCAAGGCCAAGGAAA+TGG | + | chr4_2:45297933-45297952 | Msa0602070:CDS | 45.0% | |
| CAAGGCCAAGGAAATGGTAA+TGG | + | chr4_2:45297939-45297958 | Msa0602070:CDS | 45.0% | |
| GGTAACAATGGCAACGGTAA+TGG | + | chr4_2:45297978-45297997 | Msa0602070:CDS | 45.0% | |
| ! | GGCAACGGTAATGGTAACAA+CGG | + | chr4_2:45297987-45298006 | Msa0602070:CDS | 45.0% |
| GGTAACAATGGCAACGGTAA+GGG | + | chr4_2:45297978-45297997 | Msa0602070:CDS | 45.0% | |
| GACGACAAAGACAAAGGCAA+AGG | + | chr4_2:45298077-45298096 | Msa0602070:CDS | 45.0% | |
| AGGCAAAGGAAAGGGGAAAA+AGG | + | chr4_2:45298091-45298110 | Msa0602070:CDS | 45.0% | |
| AAGCTTGCCAGCTCTTCAAT+CGG | + | chr4_2:45298136-45298155 | Msa0602070:CDS | 45.0% | |
| ! | GTCCGGAAGAGTGTAAACAA+AGG | + | chr4_2:45298216-45298235 | Msa0602070:CDS | 45.0% |
| TTTGACGTAGTCACGCGATT+TGG | - | chr4_2:45298453-45298472 | None:intergenic | 45.0% | |
| TGTTACGATCCTCGCTTTGT+TGG | + | chr4_2:45298793-45298812 | Msa0602070:CDS | 45.0% | |
| GGTGTGATGTTCTACTTCCA+TGG | + | chr4_2:45298823-45298842 | Msa0602070:CDS | 45.0% | |
| TTCTACTTCCATGGAGCCAA+AGG | + | chr4_2:45298832-45298851 | Msa0602070:CDS | 45.0% | |
| TATGGCGAAGTTTCCTCCTT+TGG | - | chr4_2:45298851-45298870 | None:intergenic | 45.0% | |
| !! | CGATGAAGTGTGCGTTGATT+TGG | - | chr4_2:45298891-45298910 | None:intergenic | 45.0% |
| AAGGACTCGCGATTACACAT+GGG | + | chr4_2:45298927-45298946 | Msa0602070:CDS | 45.0% | |
| ! | GTTGCCACTTGACTTCCATT+CGG | - | chr4_2:45299091-45299110 | None:intergenic | 45.0% |
| GACATAAGGGTAAGGCCTAT+TGG | + | chr4_2:45299186-45299205 | Msa0602070:CDS | 45.0% | |
| GGTAAGGCCTATTGGAGAAA+AGG | + | chr4_2:45299194-45299213 | Msa0602070:CDS | 45.0% | |
| CAACAACATGCAAACTCTGC+AGG | + | chr4_2:45299421-45299440 | Msa0602070:CDS | 45.0% | |
| ATTAGTCCTTGGCTAGTGGA+AGG | - | chr4_2:45299456-45299475 | None:intergenic | 45.0% | |
| AGCAATTAGTCCTTGGCTAG+TGG | - | chr4_2:45299460-45299479 | None:intergenic | 45.0% | |
| ! | TGGAAGAAAGTGGAGCATCT+TGG | + | chr4_2:45297872-45297891 | Msa0602070:CDS | 45.0% |
| ! | AAGAAAGTGGAGCATCTTGG+TGG | + | chr4_2:45297875-45297894 | Msa0602070:CDS | 45.0% |
| ATGGAAGCTGTCATTGCTCA+AGG | + | chr4_2:45297921-45297940 | Msa0602070:CDS | 45.0% | |
| ATTGCTCAAGGCCAAGGAAA+TGG | + | chr4_2:45297933-45297952 | Msa0602070:CDS | 45.0% | |
| CAAGGCCAAGGAAATGGTAA+TGG | + | chr4_2:45297939-45297958 | Msa0602070:CDS | 45.0% | |
| GGTAACAATGGCAACGGTAA+TGG | + | chr4_2:45297978-45297997 | Msa0602070:CDS | 45.0% | |
| ! | GGCAACGGTAATGGTAACAA+CGG | + | chr4_2:45297987-45298006 | Msa0602070:CDS | 45.0% |
| GGTAACAATGGCAACGGTAA+GGG | + | chr4_2:45297978-45297997 | Msa0602070:CDS | 45.0% | |
| GACGACAAAGACAAAGGCAA+AGG | + | chr4_2:45298077-45298096 | Msa0602070:CDS | 45.0% | |
| AGGCAAAGGAAAGGGGAAAA+AGG | + | chr4_2:45298091-45298110 | Msa0602070:CDS | 45.0% | |
| AAGCTTGCCAGCTCTTCAAT+CGG | + | chr4_2:45298136-45298155 | Msa0602070:CDS | 45.0% | |
| ! | GTCCGGAAGAGTGTAAACAA+AGG | + | chr4_2:45298216-45298235 | Msa0602070:CDS | 45.0% |
| TTTGACGTAGTCACGCGATT+TGG | - | chr4_2:45298453-45298472 | None:intergenic | 45.0% | |
| TGTTACGATCCTCGCTTTGT+TGG | + | chr4_2:45298793-45298812 | Msa0602070:CDS | 45.0% | |
| GGTGTGATGTTCTACTTCCA+TGG | + | chr4_2:45298823-45298842 | Msa0602070:CDS | 45.0% | |
| TTCTACTTCCATGGAGCCAA+AGG | + | chr4_2:45298832-45298851 | Msa0602070:CDS | 45.0% | |
| TATGGCGAAGTTTCCTCCTT+TGG | - | chr4_2:45298851-45298870 | None:intergenic | 45.0% | |
| !! | CGATGAAGTGTGCGTTGATT+TGG | - | chr4_2:45298891-45298910 | None:intergenic | 45.0% |
| AAGGACTCGCGATTACACAT+GGG | + | chr4_2:45298927-45298946 | Msa0602070:CDS | 45.0% | |
| ! | GTTGCCACTTGACTTCCATT+CGG | - | chr4_2:45299091-45299110 | None:intergenic | 45.0% |
| GACATAAGGGTAAGGCCTAT+TGG | + | chr4_2:45299186-45299205 | Msa0602070:CDS | 45.0% | |
| GGTAAGGCCTATTGGAGAAA+AGG | + | chr4_2:45299194-45299213 | Msa0602070:CDS | 45.0% | |
| CAACAACATGCAAACTCTGC+AGG | + | chr4_2:45299421-45299440 | Msa0602070:CDS | 45.0% | |
| ATTAGTCCTTGGCTAGTGGA+AGG | - | chr4_2:45299456-45299475 | None:intergenic | 45.0% | |
| AGCAATTAGTCCTTGGCTAG+TGG | - | chr4_2:45299460-45299479 | None:intergenic | 45.0% | |
| CGGTAACAATGGCAACGGTA+AGG | + | chr4_2:45297977-45297996 | Msa0602070:CDS | 50.0% | |
| AAGGACGAAGGCAAGGACAA+AGG | + | chr4_2:45298038-45298057 | Msa0602070:CDS | 50.0% | |
| AGCTTGCCAGCTCTTCAATC+GGG | + | chr4_2:45298137-45298156 | Msa0602070:CDS | 50.0% | |
| TTCAATCGGGACAGGAACGA+GGG | + | chr4_2:45298150-45298169 | Msa0602070:CDS | 50.0% | |
| ! | TACGATCCTCGCTTTGTTGG+TGG | + | chr4_2:45298796-45298815 | Msa0602070:CDS | 50.0% |
| TACTTCCATGGAGCCAAAGG+AGG | + | chr4_2:45298835-45298854 | Msa0602070:CDS | 50.0% | |
| ! | AGTTTCCTCCTTTGGCTCCA+TGG | - | chr4_2:45298843-45298862 | None:intergenic | 50.0% |
| TTCATCGGTACTCGACCTCA+GGG | + | chr4_2:45298904-45298923 | Msa0602070:CDS | 50.0% | |
| GAAGGACTCGCGATTACACA+TGG | + | chr4_2:45298926-45298945 | Msa0602070:CDS | 50.0% | |
| CATTCGGCATCTCCATCAGA+AGG | - | chr4_2:45299075-45299094 | None:intergenic | 50.0% | |
| CTTCTGATGGAGATGCCGAA+TGG | + | chr4_2:45299073-45299092 | Msa0602070:CDS | 50.0% | |
| GATGCCGAATGGAAGTCAAG+TGG | + | chr4_2:45299084-45299103 | Msa0602070:CDS | 50.0% | |
| ATAGCAACGCCTCTCTTGAC+AGG | - | chr4_2:45299354-45299373 | None:intergenic | 50.0% | |
| !! | TTGCTATGCCGATGATGGGA+GGG | + | chr4_2:45299367-45299386 | Msa0602070:CDS | 50.0% |
| TTGTCTTCCCCTCCCATCAT+CGG | - | chr4_2:45299378-45299397 | None:intergenic | 50.0% | |
| CGGTAACAATGGCAACGGTA+AGG | + | chr4_2:45297977-45297996 | Msa0602070:CDS | 50.0% | |
| AAGGACGAAGGCAAGGACAA+AGG | + | chr4_2:45298038-45298057 | Msa0602070:CDS | 50.0% | |
| AGCTTGCCAGCTCTTCAATC+GGG | + | chr4_2:45298137-45298156 | Msa0602070:CDS | 50.0% | |
| TTCAATCGGGACAGGAACGA+GGG | + | chr4_2:45298150-45298169 | Msa0602070:CDS | 50.0% | |
| ! | TACGATCCTCGCTTTGTTGG+TGG | + | chr4_2:45298796-45298815 | Msa0602070:CDS | 50.0% |
| TACTTCCATGGAGCCAAAGG+AGG | + | chr4_2:45298835-45298854 | Msa0602070:CDS | 50.0% | |
| ! | AGTTTCCTCCTTTGGCTCCA+TGG | - | chr4_2:45298843-45298862 | None:intergenic | 50.0% |
| TTCATCGGTACTCGACCTCA+GGG | + | chr4_2:45298904-45298923 | Msa0602070:CDS | 50.0% | |
| GAAGGACTCGCGATTACACA+TGG | + | chr4_2:45298926-45298945 | Msa0602070:CDS | 50.0% | |
| CATTCGGCATCTCCATCAGA+AGG | - | chr4_2:45299075-45299094 | None:intergenic | 50.0% | |
| CTTCTGATGGAGATGCCGAA+TGG | + | chr4_2:45299073-45299092 | Msa0602070:CDS | 50.0% | |
| GATGCCGAATGGAAGTCAAG+TGG | + | chr4_2:45299084-45299103 | Msa0602070:CDS | 50.0% | |
| ATAGCAACGCCTCTCTTGAC+AGG | - | chr4_2:45299354-45299373 | None:intergenic | 50.0% | |
| !! | TTGCTATGCCGATGATGGGA+GGG | + | chr4_2:45299367-45299386 | Msa0602070:CDS | 50.0% |
| TTGTCTTCCCCTCCCATCAT+CGG | - | chr4_2:45299378-45299397 | None:intergenic | 50.0% | |
| GCTGTCATTGCTCAAGGCCA+AGG | + | chr4_2:45297927-45297946 | Msa0602070:CDS | 55.0% | |
| TCCTGTCCCGATTGAAGAGC+TGG | - | chr4_2:45298146-45298165 | None:intergenic | 55.0% | |
| CTTCAATCGGGACAGGAACG+AGG | + | chr4_2:45298149-45298168 | Msa0602070:CDS | 55.0% | |
| !! | CCTCGCTTTGTTGGTGGTGA+CGG | + | chr4_2:45298802-45298821 | Msa0602070:CDS | 55.0% |
| CTTCATCGGTACTCGACCTC+AGG | + | chr4_2:45298903-45298922 | Msa0602070:CDS | 55.0% | |
| TAATCGCGAGTCCTTCCCTG+AGG | - | chr4_2:45298922-45298941 | None:intergenic | 55.0% | |
| ! | AGGCGTTGCTATGCCGATGA+TGG | + | chr4_2:45299362-45299381 | Msa0602070:CDS | 55.0% |
| GGCGTTGCTATGCCGATGAT+GGG | + | chr4_2:45299363-45299382 | Msa0602070:CDS | 55.0% | |
| !! | GTTGCTATGCCGATGATGGG+AGG | + | chr4_2:45299366-45299385 | Msa0602070:CDS | 55.0% |
| !! | TGCTATGCCGATGATGGGAG+GGG | + | chr4_2:45299368-45299387 | Msa0602070:CDS | 55.0% |
| GCAAACTCTGCAGGTTCCAG+AGG | + | chr4_2:45299430-45299449 | Msa0602070:CDS | 55.0% | |
| GCTGTCATTGCTCAAGGCCA+AGG | + | chr4_2:45297927-45297946 | Msa0602070:CDS | 55.0% | |
| TCCTGTCCCGATTGAAGAGC+TGG | - | chr4_2:45298146-45298165 | None:intergenic | 55.0% | |
| CTTCAATCGGGACAGGAACG+AGG | + | chr4_2:45298149-45298168 | Msa0602070:CDS | 55.0% | |
| !! | CCTCGCTTTGTTGGTGGTGA+CGG | + | chr4_2:45298802-45298821 | Msa0602070:CDS | 55.0% |
| CTTCATCGGTACTCGACCTC+AGG | + | chr4_2:45298903-45298922 | Msa0602070:CDS | 55.0% | |
| TAATCGCGAGTCCTTCCCTG+AGG | - | chr4_2:45298922-45298941 | None:intergenic | 55.0% | |
| ! | AGGCGTTGCTATGCCGATGA+TGG | + | chr4_2:45299362-45299381 | Msa0602070:CDS | 55.0% |
| GGCGTTGCTATGCCGATGAT+GGG | + | chr4_2:45299363-45299382 | Msa0602070:CDS | 55.0% | |
| !! | GTTGCTATGCCGATGATGGG+AGG | + | chr4_2:45299366-45299385 | Msa0602070:CDS | 55.0% |
| !! | TGCTATGCCGATGATGGGAG+GGG | + | chr4_2:45299368-45299387 | Msa0602070:CDS | 55.0% |
| GCAAACTCTGCAGGTTCCAG+AGG | + | chr4_2:45299430-45299449 | Msa0602070:CDS | 55.0% | |
| GCCAGCTCTTCAATCGGGAC+AGG | + | chr4_2:45298142-45298161 | Msa0602070:CDS | 60.0% | |
| CCGTCACCACCAACAAAGCG+AGG | - | chr4_2:45298805-45298824 | None:intergenic | 60.0% | |
| TCGGTACTCGACCTCAGGGA+AGG | + | chr4_2:45298908-45298927 | Msa0602070:CDS | 60.0% | |
| CTTGGCTAGTGGAAGGCCTC+TGG | - | chr4_2:45299449-45299468 | None:intergenic | 60.0% | |
| CAGAGGCCTTCCACTAGCCA+AGG | + | chr4_2:45299447-45299466 | Msa0602070:CDS | 60.0% | |
| GCCAGCTCTTCAATCGGGAC+AGG | + | chr4_2:45298142-45298161 | Msa0602070:CDS | 60.0% | |
| CCGTCACCACCAACAAAGCG+AGG | - | chr4_2:45298805-45298824 | None:intergenic | 60.0% | |
| TCGGTACTCGACCTCAGGGA+AGG | + | chr4_2:45298908-45298927 | Msa0602070:CDS | 60.0% | |
| CTTGGCTAGTGGAAGGCCTC+TGG | - | chr4_2:45299449-45299468 | None:intergenic | 60.0% | |
| CAGAGGCCTTCCACTAGCCA+AGG | + | chr4_2:45299447-45299466 | Msa0602070:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 45297867 | 45299488 | 45297867 | ID=Msa0602070;Name=Msa0602070 |
| chr4_2 | mRNA | 45297867 | 45299488 | 45297867 | ID=Msa0602070-mRNA-1;Parent=Msa0602070;Name=Msa0602070-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0|1|1|1|2|0|390 |
| chr4_2 | exon | 45297867 | 45298308 | 45297867 | ID=Msa0602070-mRNA-1:exon:10153;Parent=Msa0602070-mRNA-1 |
| chr4_2 | exon | 45298758 | 45299488 | 45298758 | ID=Msa0602070-mRNA-1:exon:10154;Parent=Msa0602070-mRNA-1 |
| chr4_2 | CDS | 45297867 | 45298308 | 45297867 | ID=Msa0602070-mRNA-1:cds;Parent=Msa0602070-mRNA-1 |
| chr4_2 | CDS | 45298758 | 45299488 | 45298758 | ID=Msa0602070-mRNA-1:cds;Parent=Msa0602070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
