Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429510 | XP_013462549.1 | 97.039 | 439 | 12 | 1 | 1 | 438 | 1 | 439 | 0.0 | 880 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429510 | sp|Q08448|LPL1_YEAST | 26.050 | 238 | 132 | 8 | 84 | 311 | 6 | 209 | 4.77e-16 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429510 | A0A072V404 | 97.039 | 439 | 12 | 1 | 1 | 438 | 1 | 439 | 0.0 | 880 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1413190 | Msa1429510 | 0.995340 | 2.657839e-215 | -8.615850e-47 |
| Msa1429510 | Msa1462780 | -0.805398 | 1.361213e-49 | -8.615850e-47 |
| Msa0705520 | Msa1429510 | -0.824217 | 9.097942e-54 | -8.615850e-47 |
| Msa0720130 | Msa1429510 | 0.800180 | 1.626773e-48 | -8.615850e-47 |
| Msa0761830 | Msa1429510 | -0.807778 | 4.280259e-50 | -8.615850e-47 |
| Msa0802950 | Msa1429510 | 0.812888 | 3.380393e-51 | -8.615850e-47 |
| Msa0184510 | Msa1429510 | 0.802944 | 4.410968e-49 | -8.615850e-47 |
| Msa0225070 | Msa1429510 | 0.831965 | 1.237938e-55 | -8.615850e-47 |
| Msa1225650 | Msa1429510 | 0.994169 | 4.198381e-205 | -8.615850e-47 |
| Msa1228600 | Msa1429510 | 0.800188 | 1.620070e-48 | -8.615850e-47 |
| Msa1323260 | Msa1429510 | 0.829272 | 5.648849e-55 | -8.615850e-47 |
| Msa1327690 | Msa1429510 | 0.806701 | 7.238738e-50 | -8.615850e-47 |
| Msa1343450 | Msa1429510 | 0.816304 | 5.923952e-52 | -8.615850e-47 |
| Msa0378310 | Msa1429510 | 0.800672 | 1.291268e-48 | -8.615850e-47 |
| Msa0392090 | Msa1429510 | 0.829235 | 5.765015e-55 | -8.615850e-47 |
| Msa0470000 | Msa1429510 | 0.817476 | 3.233515e-52 | -8.615850e-47 |
| Msa0470040 | Msa1429510 | 0.836938 | 6.976672e-57 | -8.615850e-47 |
| Msa1035640 | Msa1429510 | 0.807241 | 5.563778e-50 | -8.615850e-47 |
| Msa1093190 | Msa1429510 | 0.805038 | 1.618582e-49 | -8.615850e-47 |
| Msa0304060 | Msa1429510 | 0.807151 | 5.815367e-50 | -8.615850e-47 |
| Msa0313870 | Msa1429510 | 0.827699 | 1.354497e-54 | -8.615850e-47 |
| Msa0344610 | Msa1429510 | 0.810313 | 1.226388e-50 | -8.615850e-47 |
| Msa1205270 | Msa1429510 | 0.816799 | 4.589230e-52 | -8.615850e-47 |
| Msa0487890 | Msa1429510 | 0.812913 | 3.336900e-51 | -8.615850e-47 |
| Msa0538050 | Msa1429510 | 0.821464 | 3.981229e-53 | -8.615850e-47 |
| Msa0547340 | Msa1429510 | -0.805124 | 1.553105e-49 | -8.615850e-47 |
| Msa0566930 | Msa1429510 | -0.819010 | 1.453340e-52 | -8.615850e-47 |
| Msa0580210 | Msa1429510 | -0.808564 | 2.910586e-50 | -8.615850e-47 |
| Msa0602070 | Msa1429510 | -0.800507 | 1.395566e-48 | -8.615850e-47 |
| Msa0967900 | Msa1429510 | 0.847155 | 1.382783e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429510 | MtrunA17_Chr2g0283771 | 97.039 | 439 | 12 | 1 | 1 | 438 | 1 | 439 | 0.0 | 880 |
| Msa1429510 | MtrunA17_Chr8g0379001 | 72.889 | 450 | 107 | 7 | 3 | 438 | 2 | 450 | 0.0 | 646 |
| Msa1429510 | MtrunA17_Chr4g0072801 | 44.476 | 353 | 173 | 5 | 82 | 426 | 72 | 409 | 5.13e-92 | 284 |
| Msa1429510 | MtrunA17_Chr0c06g0493481 | 43.370 | 362 | 170 | 8 | 79 | 426 | 76 | 416 | 1.80e-90 | 280 |
| Msa1429510 | MtrunA17_Chr3g0140681 | 42.210 | 353 | 190 | 6 | 79 | 427 | 56 | 398 | 1.52e-88 | 275 |
| Msa1429510 | MtrunA17_Chr1g0170451 | 44.444 | 342 | 169 | 5 | 83 | 424 | 30 | 350 | 3.29e-88 | 272 |
| Msa1429510 | MtrunA17_Chr7g0214251 | 50.575 | 87 | 40 | 2 | 149 | 232 | 40 | 126 | 1.32e-18 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429510 | AT1G29120.1 | 67.424 | 396 | 120 | 4 | 47 | 438 | 64 | 454 | 0.0 | 520 |
| Msa1429510 | AT1G29120.8 | 67.085 | 398 | 122 | 4 | 45 | 438 | 63 | 455 | 0.0 | 520 |
| Msa1429510 | AT1G29120.2 | 67.424 | 396 | 120 | 4 | 47 | 438 | 64 | 454 | 0.0 | 520 |
| Msa1429510 | AT1G29120.5 | 67.003 | 397 | 121 | 5 | 47 | 438 | 64 | 455 | 2.18e-180 | 511 |
| Msa1429510 | AT1G29120.7 | 68.378 | 370 | 108 | 4 | 47 | 412 | 64 | 428 | 2.44e-170 | 485 |
| Msa1429510 | AT1G29120.4 | 68.182 | 330 | 96 | 4 | 47 | 372 | 64 | 388 | 2.20e-147 | 425 |
| Msa1429510 | AT1G29120.3 | 68.182 | 330 | 96 | 4 | 47 | 372 | 64 | 388 | 2.70e-147 | 425 |
| Msa1429510 | AT1G29120.6 | 66.023 | 259 | 82 | 3 | 47 | 304 | 64 | 317 | 6.65e-113 | 335 |
| Msa1429510 | AT4G25770.1 | 47.674 | 344 | 159 | 4 | 82 | 424 | 91 | 414 | 1.19e-96 | 296 |
| Msa1429510 | AT4G25770.2 | 47.385 | 325 | 150 | 4 | 82 | 405 | 91 | 395 | 7.38e-89 | 276 |
| Msa1429510 | AT5G51180.2 | 42.690 | 342 | 174 | 5 | 83 | 424 | 34 | 353 | 1.10e-87 | 271 |
| Msa1429510 | AT5G51180.1 | 42.690 | 342 | 174 | 5 | 83 | 424 | 34 | 353 | 1.10e-87 | 271 |
| Msa1429510 | AT1G10040.1 | 42.090 | 354 | 180 | 6 | 79 | 426 | 76 | 410 | 2.13e-85 | 267 |
| Msa1429510 | AT1G10040.2 | 42.342 | 333 | 167 | 6 | 79 | 405 | 76 | 389 | 2.55e-78 | 249 |
Find 161 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGTAGCTCCATTGTTTAT+TGG | 0.190651 | tig0026517:-32508 | Msa1429510:CDS |
| CCTGAAGCGAATATCCTTTC+TGG | 0.194294 | tig0026517:-33293 | Msa1429510:CDS |
| TGTAGAATTTCATGAAATTA+TGG | 0.246342 | tig0026517:-31441 | Msa1429510:CDS |
| GCTTACACTAAGACATTTAC+TGG | 0.264384 | tig0026517:-33478 | Msa1429510:CDS |
| ACACGTAGGAAAATTGAATA+AGG | 0.270828 | tig0026517:-30955 | Msa1429510:three_prime_UTR |
| TAAGTAAGTGTGAAATTTCT+TGG | 0.281576 | tig0026517:+36183 | None:intergenic |
| CCACATTCGTAAACCTTTAC+TGG | 0.281747 | tig0026517:-30983 | Msa1429510:three_prime_UTR |
| TACAATTATTTGGAAAGTTC+TGG | 0.286429 | tig0026517:-36135 | Msa1429510:five_prime_UTR |
| CTACAACGCGCGTAAATAAA+AGG | 0.296569 | tig0026517:+36085 | None:intergenic |
| GCAGTACATGGATGTTACTA+TGG | 0.298616 | tig0026517:+31214 | None:intergenic |
| TTGTTCTTGTCCATGGTATC+TGG | 0.304231 | tig0026517:-34670 | Msa1429510:CDS |
| AAGTTCGATTTCCCTCCTTA+TGG | 0.311023 | tig0026517:+32146 | None:intergenic |
| TGAATTTACACAGAAAATAA+TGG | 0.312150 | tig0026517:+30794 | None:intergenic |
| TCCTTTCTGGCCCATTCTCT+TGG | 0.333297 | tig0026517:-33280 | Msa1429510:CDS |
| TGAGGTCCATCGGAAGGAAT+TGG | 0.338684 | tig0026517:+31518 | None:intergenic |
| GTTCTGGTTCCTTTGCTATA+TGG | 0.340792 | tig0026517:-36119 | Msa1429510:exon |
| ACAGCCTCCACGCCAATCTT+TGG | 0.344306 | tig0026517:-31579 | Msa1429510:intron |
| AGAAGAGTGTAAGGTATCTT+TGG | 0.350757 | tig0026517:-30876 | Msa1429510:three_prime_UTR |
| GAGGTCCATCGGAAGGAATT+GGG | 0.357643 | tig0026517:+31519 | None:intergenic |
| ATCAGGTTGGCCACTATTAT+AGG | 0.360766 | tig0026517:+33210 | None:intergenic |
| TCCTTTGCTTTCACTGCCTC+CGG | 0.369392 | tig0026517:+31488 | None:intergenic |
| TACTCATAGCTTCAGCTCTA+AGG | 0.378413 | tig0026517:+34759 | None:intergenic |
| TCAACTTTCACTCAGCAGTT+TGG | 0.384156 | tig0026517:-31248 | Msa1429510:CDS |
| CAAAAGAAGGGATGGTTTGT+TGG | 0.385209 | tig0026517:+32447 | None:intergenic |
| CCAACGCGGCCAATCTTTGT+TGG | 0.393315 | tig0026517:+30614 | None:intergenic |
| GGTGGAGGAAGAAGAGCAAC+AGG | 0.395750 | tig0026517:+36012 | None:intergenic |
| TGGCCACTATTATAGGTATC+AGG | 0.400578 | tig0026517:+33217 | None:intergenic |
| GGTGGCCATCCCAGCTCATC+TGG | 0.402780 | tig0026517:-36301 | Msa1429510:five_prime_UTR |
| CAATTGCATATCTAGCAAAT+AGG | 0.405550 | tig0026517:+33254 | None:intergenic |
| GCTAAAGTAATAAAATTCAT+TGG | 0.408625 | tig0026517:+33118 | None:intergenic |
| AAACCAAGAGGCATCGTTAC+GGG | 0.412999 | tig0026517:-30557 | Msa1429510:three_prime_UTR |
| TCGCAGTTTGCTGGATCATC+AGG | 0.414201 | tig0026517:+33193 | None:intergenic |
| TTTAACAGAGGAGATGATAC+AGG | 0.415436 | tig0026517:-31304 | Msa1429510:intron |
| ATGGCCACCGCCTACCAATC+AGG | 0.416351 | tig0026517:+36315 | None:intergenic |
| CATCTCCTTGTTCTTGTCCA+TGG | 0.421595 | tig0026517:-34677 | Msa1429510:CDS |
| TCCGCATAACTCCAGTCACC+TGG | 0.422658 | tig0026517:+34043 | None:intergenic |
| CGCGGCCAATCTTTGTTGGA+TGG | 0.423379 | tig0026517:+30618 | None:intergenic |
| GATACAGGGATTACAAAGAT+TGG | 0.424431 | tig0026517:-31289 | Msa1429510:CDS |
| TTTCTGGCCCATTCTCTTGG+AGG | 0.425581 | tig0026517:-33277 | Msa1429510:CDS |
| ACTCCGCATCTTGGCGTAAG+AGG | 0.426849 | tig0026517:-33094 | Msa1429510:CDS |
| TTGTCCATGGTATCTGGTCT+AGG | 0.430182 | tig0026517:-34664 | Msa1429510:intron |
| AAAAGAAGGGATGGTTTGTT+GGG | 0.430748 | tig0026517:+32448 | None:intergenic |
| ATCGGAACACCGAACAGAAA+TGG | 0.430885 | tig0026517:+32550 | None:intergenic |
| AAGAGGGATGATTGCTGGAC+TGG | 0.433128 | tig0026517:-33143 | Msa1429510:CDS |
| GAATTTACACAGAAAATAAT+GGG | 0.434251 | tig0026517:+30795 | None:intergenic |
| TAAATGTTGTGATAAGAAAC+AGG | 0.435922 | tig0026517:-31007 | Msa1429510:three_prime_UTR |
| ACAACATTTATTTATGATGT+TGG | 0.437266 | tig0026517:+31020 | None:intergenic |
| GTTTGTATTGATGTATCAAA+TGG | 0.437523 | tig0026517:+30743 | None:intergenic |
| CAATTGTGAGCCAGATGAGC+TGG | 0.442144 | tig0026517:+36291 | None:intergenic |
| CCAGAAAGGATATTCGCTTC+AGG | 0.442879 | tig0026517:+33293 | None:intergenic |
| ACAAGAACAAGGAGATGATC+AGG | 0.445282 | tig0026517:+34683 | None:intergenic |
| ACTGATACAGCCCAGGTGAC+TGG | 0.446874 | tig0026517:-34054 | Msa1429510:intron |
| TTAATAGAATCTCTGGACTA+AGG | 0.447403 | tig0026517:+30642 | None:intergenic |
| GTTACGGGCACAAGATCATT+TGG | 0.449814 | tig0026517:-30542 | Msa1429510:three_prime_UTR |
| GAAAATGAAGCTAGGGGTGG+AGG | 0.449942 | tig0026517:+35997 | None:intergenic |
| TGGAGGAAGAAGAGCAACAG+GGG | 0.449972 | tig0026517:+36014 | None:intergenic |
| AAGTAAGTGTGAAATTTCTT+GGG | 0.452608 | tig0026517:+36184 | None:intergenic |
| AGAACGTGTTTCTCAAACTA+GGG | 0.453072 | tig0026517:-30826 | Msa1429510:three_prime_UTR |
| CAGAAGCCATTCTCAAAAGA+AGG | 0.453668 | tig0026517:+32434 | None:intergenic |
| CAAATAGGCCTCCAAGAGAA+TGG | 0.458924 | tig0026517:+33269 | None:intergenic |
| TCAAAGCTTCCATTTCTGTT+CGG | 0.459099 | tig0026517:-32559 | Msa1429510:intron |
| AGTGTCAGGAGAAGAGTGTA+AGG | 0.460987 | tig0026517:-30885 | Msa1429510:three_prime_UTR |
| CGATGGACCTCAATTTCCTC+CGG | 0.468852 | tig0026517:-31507 | Msa1429510:CDS |
| CTACGTGTATAGACCAGTAA+AGG | 0.472537 | tig0026517:+30970 | None:intergenic |
| GGATGGCTTAATAGAATCTC+TGG | 0.472863 | tig0026517:+30635 | None:intergenic |
| TTTGTATTGATGTATCAAAT+GGG | 0.473174 | tig0026517:+30744 | None:intergenic |
| TAACCTATATAGATATGGTT+GGG | 0.474158 | tig0026517:-32182 | Msa1429510:intron |
| CACGTAGGAAAATTGAATAA+GGG | 0.476312 | tig0026517:-30954 | Msa1429510:three_prime_UTR |
| GTGCCCGTAACGATGCCTCT+TGG | 0.477328 | tig0026517:+30554 | None:intergenic |
| GCTTGTATCCATCCAAAGAT+TGG | 0.478195 | tig0026517:+31567 | None:intergenic |
| ATGGCTTCTGACTGTGAAGA+TGG | 0.478288 | tig0026517:-32421 | Msa1429510:CDS |
| TTAAGCCATCCAACAAAGAT+TGG | 0.479936 | tig0026517:-30623 | Msa1429510:three_prime_UTR |
| TGTTGGGTTTATCATCAGTA+AGG | 0.480234 | tig0026517:+32464 | None:intergenic |
| ATCTGATAGTATATAGTGTC+AGG | 0.481869 | tig0026517:-30899 | Msa1429510:three_prime_UTR |
| TCACCTGATACCTATAATAG+TGG | 0.482484 | tig0026517:-33220 | Msa1429510:CDS |
| AGGTGAGTGAAAATGAAGCT+AGG | 0.483864 | tig0026517:+35989 | None:intergenic |
| AAATTATGAAATCTAGCAAA+TGG | 0.485991 | tig0026517:-30667 | Msa1429510:three_prime_UTR |
| ACTTTAGCAACTCCGCATCT+TGG | 0.486963 | tig0026517:-33103 | Msa1429510:CDS |
| CCAATAAACAATGGAGCTAC+AGG | 0.492808 | tig0026517:+32508 | None:intergenic |
| TAGCTCCATTGTTTATTGGT+CGG | 0.497267 | tig0026517:-32504 | Msa1429510:CDS |
| AAGAAATGGCTTCACAATGC+TGG | 0.502561 | tig0026517:-31104 | Msa1429510:CDS |
| AAAACCAAGAGGCATCGTTA+CGG | 0.503479 | tig0026517:-30558 | Msa1429510:three_prime_UTR |
| ATAAGGAGGGAAATCGAACT+TGG | 0.506230 | tig0026517:-32144 | Msa1429510:CDS |
| ATACAGGGATTACAAAGATT+GGG | 0.509448 | tig0026517:-31288 | Msa1429510:CDS |
| AAGTCTCCTGCTAAAACCAC+TGG | 0.510527 | tig0026517:-34722 | Msa1429510:CDS |
| TTTACTGGGATTGATGAAGC+TGG | 0.513591 | tig0026517:-33463 | Msa1429510:CDS |
| CCAGTAAAGGTTTACGAATG+TGG | 0.514517 | tig0026517:+30983 | None:intergenic |
| ACTGCCTCCGGAGGAAATTG+AGG | 0.515275 | tig0026517:+31500 | None:intergenic |
| AAATAGGCCTCCAAGAGAAT+GGG | 0.520903 | tig0026517:+33270 | None:intergenic |
| CCAACAAAGATTGGCCGCGT+TGG | 0.521788 | tig0026517:-30614 | Msa1429510:three_prime_UTR |
| TTAACCTATATAGATATGGT+TGG | 0.524781 | tig0026517:-32183 | Msa1429510:intron |
| TCCAAGAGAATGGGCCAGAA+AGG | 0.524839 | tig0026517:+33279 | None:intergenic |
| AGCTATGAGTACTACCACTC+AGG | 0.525136 | tig0026517:-34747 | Msa1429510:CDS |
| TAATAGAATCTCTGGACTAA+GGG | 0.526979 | tig0026517:+30643 | None:intergenic |
| CCATTGTTTATTGGTCGGAC+TGG | 0.527917 | tig0026517:-32499 | Msa1429510:CDS |
| TTATGATGTTGGTAAAATTG+AGG | 0.528337 | tig0026517:+31031 | None:intergenic |
| GGAGGAAGAAGAGCAACAGG+GGG | 0.529934 | tig0026517:+36015 | None:intergenic |
| GGTGGCGCACGTCCTCCATA+AGG | 0.530656 | tig0026517:-32161 | Msa1429510:CDS |
| AGGAAAATTGAATAAGGGAA+AGG | 0.533832 | tig0026517:-30949 | Msa1429510:three_prime_UTR |
| AAGGATATTCGCTTCAGGCT+CGG | 0.535585 | tig0026517:+33298 | None:intergenic |
| ATTAGGTGTCGTGACCTGAT+TGG | 0.537221 | tig0026517:-36329 | None:intergenic |
| GCCATTCTCAAAAGAAGGGA+TGG | 0.545625 | tig0026517:+32439 | None:intergenic |
| GGTGAGTGAAAATGAAGCTA+GGG | 0.547244 | tig0026517:+35990 | None:intergenic |
| AGGTCCATCGGAAGGAATTG+GGG | 0.548499 | tig0026517:+31520 | None:intergenic |
| TGTTATGACACAACAACCGC+TGG | 0.549188 | tig0026517:-36225 | Msa1429510:five_prime_UTR |
| TTCCCTCTTACGCCAAGATG+CGG | 0.550452 | tig0026517:+33091 | None:intergenic |
| TTTGCTTTCACTGCCTCCGG+AGG | 0.552823 | tig0026517:+31491 | None:intergenic |
| GAGAACGTGTTTCTCAAACT+AGG | 0.555847 | tig0026517:-30827 | Msa1429510:three_prime_UTR |
| CTCCGCATCTTGGCGTAAGA+GGG | 0.558128 | tig0026517:-33093 | Msa1429510:CDS |
| GAGGGAAATCGAACTTGGTA+AGG | 0.559034 | tig0026517:-32139 | Msa1429510:intron |
| TGGCTTCACAATGCTGGTGT+AGG | 0.563718 | tig0026517:-31098 | Msa1429510:CDS |
| CGGAGGAAATTGAGGTCCAT+CGG | 0.564835 | tig0026517:+31508 | None:intergenic |
| GGCGCACGTCCTCCATAAGG+AGG | 0.571549 | tig0026517:-32158 | Msa1429510:CDS |
| TTCGATTTCCCTCCTTATGG+AGG | 0.572163 | tig0026517:+32149 | None:intergenic |
| CAGTACATGGATGTTACTAT+GGG | 0.572825 | tig0026517:+31215 | None:intergenic |
| CTTACACTAAGACATTTACT+GGG | 0.574022 | tig0026517:-33477 | Msa1429510:CDS |
| GTGGAGGAAGAAGAGCAACA+GGG | 0.577058 | tig0026517:+36013 | None:intergenic |
| CAGTAAAGGTTTACGAATGT+GGG | 0.583435 | tig0026517:+30984 | None:intergenic |
| GTGAGCCAGATGAGCTGGGA+TGG | 0.589418 | tig0026517:+36296 | None:intergenic |
| CCTCCACGCCAATCTTTGGA+TGG | 0.594116 | tig0026517:-31575 | Msa1429510:CDS |
| AAAATAGGGAATTACCAGAA+AGG | 0.595675 | tig0026517:+35969 | None:intergenic |
| AGTTTGCTGGATCATCAGGT+TGG | 0.596532 | tig0026517:+33197 | None:intergenic |
| TGATCCAGCAAACTGCGAGA+TGG | 0.597740 | tig0026517:-33188 | Msa1429510:CDS |
| AGAAGCCATTCTCAAAAGAA+GGG | 0.599139 | tig0026517:+32435 | None:intergenic |
| GAATTTCATGAAATTATGGA+AGG | 0.599293 | tig0026517:-31437 | Msa1429510:intron |
| GGTGTCGTGACCTGATTGGT+AGG | 0.603721 | tig0026517:-36325 | None:intergenic |
| CCATCCAAAGATTGGCGTGG+AGG | 0.605389 | tig0026517:+31575 | None:intergenic |
| GCTATGAGTACTACCACTCA+GGG | 0.606664 | tig0026517:-34746 | Msa1429510:CDS |
| GACTCAACAGCAGCAACTTG+TGG | 0.607470 | tig0026517:+30589 | None:intergenic |
| AGCAGGAGACTTTCCCTGAG+TGG | 0.608321 | tig0026517:+34733 | None:intergenic |
| GTGACCTGATTGGTAGGCGG+TGG | 0.609899 | tig0026517:-36319 | Msa1429510:five_prime_UTR |
| AGGGATTACAAAGATTGGGA+TGG | 0.615998 | tig0026517:-31284 | Msa1429510:CDS |
| CCGCATAACTCCAGTCACCT+GGG | 0.616017 | tig0026517:+34044 | None:intergenic |
| GGAAATTGAGGTCCATCGGA+AGG | 0.616513 | tig0026517:+31512 | None:intergenic |
| AGTGAAAATGAAGCTAGGGG+TGG | 0.618416 | tig0026517:+35994 | None:intergenic |
| TTAACAGAGGAGATGATACA+GGG | 0.625473 | tig0026517:-31303 | Msa1429510:intron |
| AATTGTGAGCCAGATGAGCT+GGG | 0.632582 | tig0026517:+36292 | None:intergenic |
| AGATACCATGGACAAGAACA+AGG | 0.635264 | tig0026517:+34672 | None:intergenic |
| CCTATATAGATATGGTTGGG+TGG | 0.635344 | tig0026517:-32179 | Msa1429510:intron |
| ACTTCTGCAGGTGCAAACAA+AGG | 0.635660 | tig0026517:-34797 | Msa1429510:intron |
| TATCCATCCAAAGATTGGCG+TGG | 0.638279 | tig0026517:+31572 | None:intergenic |
| ATGCTGCTGCCATATAGCAA+AGG | 0.640400 | tig0026517:+36110 | None:intergenic |
| TGGACCTCAATTTCCTCCGG+AGG | 0.641292 | tig0026517:-31504 | Msa1429510:CDS |
| ATTACCTAGACCAGATACCA+TGG | 0.645160 | tig0026517:+34660 | None:intergenic |
| AGTCTCCTGCTAAAACCACT+GGG | 0.648790 | tig0026517:-34721 | Msa1429510:CDS |
| ATCATTCTTCAGATTCCCAG+TGG | 0.649086 | tig0026517:+34706 | None:intergenic |
| GAACGTGTTTCTCAAACTAG+GGG | 0.649295 | tig0026517:-30825 | Msa1429510:three_prime_UTR |
| CCCAGGTGACTGGAGTTATG+CGG | 0.649781 | tig0026517:-34044 | Msa1429510:CDS |
| TCCGGAGGCAGTGAAAGCAA+AGG | 0.653002 | tig0026517:-31489 | Msa1429510:CDS |
| CCAGTCCGACCAATAAACAA+TGG | 0.653339 | tig0026517:+32499 | None:intergenic |
| TTGTATTGATGTATCAAATG+GGG | 0.657146 | tig0026517:+30745 | None:intergenic |
| GCGCACGTCCTCCATAAGGA+GGG | 0.668252 | tig0026517:-32157 | Msa1429510:CDS |
| ATGTTACTATGGGCAAAGAG+AGG | 0.669169 | tig0026517:+31225 | None:intergenic |
| CAAATTGTGACAAGTTCCAG+CGG | 0.669267 | tig0026517:+36209 | None:intergenic |
| GGTCCATCGGAAGGAATTGG+GGG | 0.676997 | tig0026517:+31521 | None:intergenic |
| AGGTGACTGGAGTTATGCGG+AGG | 0.678765 | tig0026517:-34041 | Msa1429510:CDS |
| GTGAGTGAAAATGAAGCTAG+GGG | 0.707096 | tig0026517:+35991 | None:intergenic |
| AGCAACTTGTGGTTCCAACG+CGG | 0.713596 | tig0026517:+30600 | None:intergenic |
| CTTTACTGGTCTATACACGT+AGG | 0.714453 | tig0026517:-30969 | Msa1429510:three_prime_UTR |
| AACGTGTTTCTCAAACTAGG+GGG | 0.716656 | tig0026517:-30824 | Msa1429510:three_prime_UTR |
| GTCGTGACCTGATTGGTAGG+CGG | 0.716999 | tig0026517:-36322 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGAAAAAGAATAAAATA+GGG | + | tig0026517:30889-30908 | None:intergenic | 10.0% |
| !! | AAATTGAAAAAGAATAAAAT+AGG | + | tig0026517:30890-30909 | None:intergenic | 10.0% |
| !!! | TTTTATTCTTTTTCAATTTT+AGG | - | tig0026517:30891-30910 | Msa1429510:three_prime_UTR | 10.0% |
| !!! | ATCATATATTAATATTTCTA+TGG | + | tig0026517:32008-32027 | None:intergenic | 10.0% |
| !!! | TTAATATATGATTTTAATGT+TGG | - | tig0026517:32016-32035 | Msa1429510:intron | 10.0% |
| !! | AATTAAAGATTAATTTAACA+TGG | + | tig0026517:33289-33308 | None:intergenic | 10.0% |
| !! | CAAAAATAGATACAATTATT+TGG | - | tig0026517:30696-30715 | Msa1429510:three_prime_UTR | 15.0% |
| !! | TAAAGAAAACAAGAAAAAAA+AGG | + | tig0026517:32918-32937 | None:intergenic | 15.0% |
| !!! | AAGAAATTTTTTGAAAATCT+TGG | - | tig0026517:33062-33081 | Msa1429510:intron | 15.0% |
| !!! | AGAAATTTTTTGAAAATCTT+GGG | - | tig0026517:33063-33082 | Msa1429510:intron | 15.0% |
| !!! | AGAAATCAAATTCATTTTTA+AGG | + | tig0026517:33325-33344 | None:intergenic | 15.0% |
| !! | GAACTATATAAAAATTCTAA+AGG | + | tig0026517:34211-34230 | None:intergenic | 15.0% |
| !!! | AGAATTTTTATATAGTTCAA+TGG | - | tig0026517:34213-34232 | Msa1429510:intron | 15.0% |
| !!! | GAATTTTTATATAGTTCAAT+GGG | - | tig0026517:34214-34233 | Msa1429510:intron | 15.0% |
| !! | AATACAAATTTCATAATCAT+AGG | + | tig0026517:34847-34866 | None:intergenic | 15.0% |
| !! | TGAAAACAAAAATGAAATAA+AGG | + | tig0026517:36151-36170 | None:intergenic | 15.0% |
| !!! | GTTTAACTTGTTCTATAATT+CGG | - | tig0026517:30953-30972 | Msa1429510:three_prime_UTR | 20.0% |
| !! | AATCATCATAAATTTAGACA+TGG | + | tig0026517:31203-31222 | None:intergenic | 20.0% |
| !!! | TGTAGTAATTTGTATTGATT+AGG | - | tig0026517:31379-31398 | Msa1429510:intron | 20.0% |
| !! | GAATTCAGAATTATTCAATT+AGG | - | tig0026517:31468-31487 | Msa1429510:CDS | 20.0% |
| !!! | TCTTTTGTTTCTCTTTAATT+CGG | - | tig0026517:31605-31624 | Msa1429510:intron | 20.0% |
| !!! | AAGTTTTCACTGATTATTTA+AGG | + | tig0026517:32556-32575 | None:intergenic | 20.0% |
| !! | TATTGAACCATAAGTAAAAA+AGG | + | tig0026517:32874-32893 | None:intergenic | 20.0% |
| !! | TTCAAAAAATTTCTTCTGTT+GGG | + | tig0026517:33057-33076 | None:intergenic | 20.0% |
| !! | TTTCAAAAAATTTCTTCTGT+TGG | + | tig0026517:33058-33077 | None:intergenic | 20.0% |
| !! | GCTAAAGTAATAAAATTCAT+TGG | + | tig0026517:33726-33745 | None:intergenic | 20.0% |
| !! | TAAAGGAATAACACAAATTA+AGG | + | tig0026517:34641-34660 | None:intergenic | 20.0% |
| !! | AAAATTAATGCATTATAGTC+AGG | + | tig0026517:34943-34962 | None:intergenic | 20.0% |
| !!! | AATATTTGAAACATAGGATA+TGG | + | tig0026517:35089-35108 | None:intergenic | 20.0% |
| !! | TGTAGAATTTCATGAAATTA+TGG | - | tig0026517:35400-35419 | Msa1429510:intron | 20.0% |
| !! | ACAACATTTATTTATGATGT+TGG | + | tig0026517:35824-35843 | None:intergenic | 20.0% |
| !! | GAATTTACACAGAAAATAAT+GGG | + | tig0026517:36049-36068 | None:intergenic | 20.0% |
| !! | TGAATTTACACAGAAAATAA+TGG | + | tig0026517:36050-36069 | None:intergenic | 20.0% |
| !!! | TTTGTATTGATGTATCAAAT+GGG | + | tig0026517:36100-36119 | None:intergenic | 20.0% |
| !! | ACAAAAATGAAATAAAGGAA+TGG | + | tig0026517:36146-36165 | None:intergenic | 20.0% |
| !! | AAATTATGAAATCTAGCAAA+TGG | - | tig0026517:36174-36193 | Msa1429510:five_prime_UTR | 20.0% |
| ! | AAGTAAGTGTGAAATTTCTT+GGG | + | tig0026517:30660-30679 | None:intergenic | 25.0% |
| ! | TAAGTAAGTGTGAAATTTCT+TGG | + | tig0026517:30661-30680 | None:intergenic | 25.0% |
| ! | TACAATTATTTGGAAAGTTC+TGG | - | tig0026517:30706-30725 | Msa1429510:three_prime_UTR | 25.0% |
| ! | TGAGAAAAAGAAGTAATTAG+TGG | + | tig0026517:30789-30808 | None:intergenic | 25.0% |
| ! | AGTTAAACAACAATAAATGC+AGG | + | tig0026517:30941-30960 | None:intergenic | 25.0% |
| !! | TCTATAATTCGGTTAATTTG+TGG | - | tig0026517:30964-30983 | Msa1429510:three_prime_UTR | 25.0% |
| !!! | CTATAATTCGGTTAATTTGT+GGG | - | tig0026517:30965-30984 | Msa1429510:three_prime_UTR | 25.0% |
| !!! | TATAATTCGGTTAATTTGTG+GGG | - | tig0026517:30966-30985 | Msa1429510:three_prime_UTR | 25.0% |
| ! | GACAAAGAATTATTTCATTC+AGG | + | tig0026517:31062-31081 | None:intergenic | 25.0% |
| ! | CAATGATTTGAATTCAATTG+CGG | - | tig0026517:31165-31184 | Msa1429510:intron | 25.0% |
| !!! | TAATTTGTATTGATTAGGAG+CGG | - | tig0026517:31384-31403 | Msa1429510:intron | 25.0% |
| ! | GTCCTATTTATACAAACTAA+GGG | + | tig0026517:31426-31445 | None:intergenic | 25.0% |
| ! | TTTGTATAAATAGGACCATT+TGG | - | tig0026517:31430-31449 | Msa1429510:intron | 25.0% |
| ! | TATTCAATTAGGAACCTTAT+TGG | - | tig0026517:31479-31498 | Msa1429510:CDS | 25.0% |
| !!! | CTTTTGTTTCTCTTTAATTC+GGG | - | tig0026517:31606-31625 | Msa1429510:intron | 25.0% |
| !! | CCATTTTCTCAAATTATCAT+AGG | + | tig0026517:31675-31694 | None:intergenic | 25.0% |
| ! | CCTATGATAATTTGAGAAAA+TGG | - | tig0026517:31672-31691 | Msa1429510:intron | 25.0% |
| ! | AACTTCATGTCTAAAAAAAC+AGG | - | tig0026517:31881-31900 | Msa1429510:intron | 25.0% |
| ! | ACTTCATGTCTAAAAAAACA+GGG | - | tig0026517:31882-31901 | Msa1429510:intron | 25.0% |
| ! | TGATTGCAATTAAAAAGACT+AGG | + | tig0026517:32483-32502 | None:intergenic | 25.0% |
| ! | AACAAGTTAAAACATCCAAT+TGG | + | tig0026517:32764-32783 | None:intergenic | 25.0% |
| ! | AAGAGTTAAAAATGAACCTT+GGG | - | tig0026517:32823-32842 | Msa1429510:intron | 25.0% |
| ! | AGAAAACAAGAAAAAAAAGG+TGG | + | tig0026517:32915-32934 | None:intergenic | 25.0% |
| ! | AAATGCTTAAAACTCATTGA+AGG | - | tig0026517:32982-33001 | Msa1429510:intron | 25.0% |
| ! | TCAAAAAATTTCTTCTGTTG+GGG | + | tig0026517:33056-33075 | None:intergenic | 25.0% |
| ! | TCAACATATACAACTAACTA+GGG | + | tig0026517:33233-33252 | None:intergenic | 25.0% |
| !! | ATATTTCCTTTTATCACAAC+AGG | - | tig0026517:33497-33516 | Msa1429510:intron | 25.0% |
| ! | TGTTCAGAACAATCAAATTA+TGG | - | tig0026517:33783-33802 | Msa1429510:intron | 25.0% |
| !!! | AGCTTTTATTTTGACACATA+TGG | - | tig0026517:33806-33825 | Msa1429510:intron | 25.0% |
| ! | ATATACTTCTTTCTCTTAAC+TGG | - | tig0026517:34074-34093 | Msa1429510:intron | 25.0% |
| ! | AAACTTGAATGATTAAGCAA+TGG | + | tig0026517:34132-34151 | None:intergenic | 25.0% |
| ! | TGGAAAATTCATGTATGTAA+TGG | - | tig0026517:34440-34459 | Msa1429510:intron | 25.0% |
| !!! | TGATTGTTTTACTGAAACAA+AGG | + | tig0026517:34491-34510 | None:intergenic | 25.0% |
| ! | TCCTTTAACCTATATAGATA+TGG | - | tig0026517:34654-34673 | Msa1429510:intron | 25.0% |
| ! | ACCATATCTATATAGGTTAA+AGG | + | tig0026517:34658-34677 | None:intergenic | 25.0% |
| ! | TTAACCTATATAGATATGGT+TGG | - | tig0026517:34658-34677 | Msa1429510:intron | 25.0% |
| ! | TAACCTATATAGATATGGTT+GGG | - | tig0026517:34659-34678 | Msa1429510:intron | 25.0% |
| !! | GTCTTCTAATTTTGAATCAT+TGG | - | tig0026517:35021-35040 | Msa1429510:intron | 25.0% |
| !! | CTAATTTTGAATCATTGGAA+TGG | - | tig0026517:35026-35045 | Msa1429510:intron | 25.0% |
| ! | AAAATTGTGATATGTTAGCA+GGG | + | tig0026517:35064-35083 | None:intergenic | 25.0% |
| ! | TAAAATTGTGATATGTTAGC+AGG | + | tig0026517:35065-35084 | None:intergenic | 25.0% |
| ! | CTACATGGAATTTATAGTTA+TGG | + | tig0026517:35115-35134 | None:intergenic | 25.0% |
| ! | GAATTTCATGAAATTATGGA+AGG | - | tig0026517:35404-35423 | Msa1429510:intron | 25.0% |
| !!! | TCTTCTATTAGTTTTGGTTA+TGG | + | tig0026517:35436-35455 | None:intergenic | 25.0% |
| !!! | AGAGTATCTTCTATTAGTTT+TGG | + | tig0026517:35442-35461 | None:intergenic | 25.0% |
| !!! | AGATACTCTAGTTTACATTT+TGG | - | tig0026517:35453-35472 | Msa1429510:intron | 25.0% |
| !!! | GATACTCTAGTTTACATTTT+GGG | - | tig0026517:35454-35473 | Msa1429510:intron | 25.0% |
| ! | TTTATAACATGAGTATTCCT+TGG | - | tig0026517:35701-35720 | Msa1429510:intron | 25.0% |
| !! | TTATGATGTTGGTAAAATTG+AGG | + | tig0026517:35813-35832 | None:intergenic | 25.0% |
| ! | TAAATGTTGTGATAAGAAAC+AGG | - | tig0026517:35834-35853 | Msa1429510:intron | 25.0% |
| !! | TTGTATTGATGTATCAAATG+GGG | + | tig0026517:36099-36118 | None:intergenic | 25.0% |
| !! | GTTTGTATTGATGTATCAAA+TGG | + | tig0026517:36101-36120 | None:intergenic | 25.0% |
| AAAATAGGGAATTACCAGAA+AGG | + | tig0026517:30875-30894 | None:intergenic | 30.0% | |
| ACCAAGTAATTGAGTTCAAT+CGG | - | tig0026517:31021-31040 | Msa1429510:exon | 30.0% | |
| TATGAAGCACATACATTGTT+AGG | - | tig0026517:31229-31248 | Msa1429510:CDS | 30.0% | |
| !! | TGCCCTTAGTTTGTATAAAT+AGG | - | tig0026517:31421-31440 | Msa1429510:intron | 30.0% |
| GGTCCTATTTATACAAACTA+AGG | + | tig0026517:31427-31446 | None:intergenic | 30.0% | |
| GAGTTAAAAGATAGTCTGAA+CGG | - | tig0026517:32236-32255 | Msa1429510:intron | 30.0% | |
| AAGAAAAACCAACAAGCTTA+AGG | - | tig0026517:32267-32286 | Msa1429510:intron | 30.0% | |
| TCATAAAACCTTAAGCTTGT+TGG | + | tig0026517:32278-32297 | None:intergenic | 30.0% | |
| TAACCAACATTGTTTCACAA+TGG | + | tig0026517:32327-32346 | None:intergenic | 30.0% | |
| CAATTAAAAAGACTAGGACA+GGG | + | tig0026517:32477-32496 | None:intergenic | 30.0% | |
| !! | AGGTTTTAGTGCAAGATATA+TGG | + | tig0026517:32593-32612 | None:intergenic | 30.0% |
| ATATATCTTGCACTAAAACC+TGG | - | tig0026517:32592-32611 | Msa1429510:intron | 30.0% | |
| TGCACAATATCTCTAGTAAT+TGG | - | tig0026517:32646-32665 | Msa1429510:intron | 30.0% | |
| TATCTCTAGTAATTGGATGT+TGG | - | tig0026517:32653-32672 | Msa1429510:intron | 30.0% | |
| GAAGAGTTAAAAATGAACCT+TGG | - | tig0026517:32822-32841 | Msa1429510:intron | 30.0% | |
| ! | GAATTAAAAAGCTTTTCCCA+AGG | + | tig0026517:32842-32861 | None:intergenic | 30.0% |
| !! | GGGAAAAGCTTTTTAATTCA+TGG | - | tig0026517:32843-32862 | Msa1429510:intron | 30.0% |
| !!! | GGTAACTCCTTTTTTACTTA+TGG | - | tig0026517:32864-32883 | Msa1429510:intron | 30.0% |
| GGTGGTAGAAACAAAATAAA+TGG | + | tig0026517:32897-32916 | None:intergenic | 30.0% | |
| TTAAAACTCATTGAAGGTAG+TGG | - | tig0026517:32988-33007 | Msa1429510:intron | 30.0% | |
| AATTTCACAGAAAACAAGCA+TGG | + | tig0026517:33168-33187 | None:intergenic | 30.0% | |
| CTCAACATATACAACTAACT+AGG | + | tig0026517:33234-33253 | None:intergenic | 30.0% | |
| CTTACACTAAGACATTTACT+GGG | - | tig0026517:33364-33383 | Msa1429510:intron | 30.0% | |
| CAATTGCATATCTAGCAAAT+AGG | + | tig0026517:33590-33609 | None:intergenic | 30.0% | |
| ! | TACTGTATGTTTTATGCTGA+TGG | - | tig0026517:33873-33892 | Msa1429510:intron | 30.0% |
| TCACAGCTTACATAATGTTT+AGG | - | tig0026517:33897-33916 | Msa1429510:intron | 30.0% | |
| !!! | TCCTACGAATTTTTTCTTAC+TGG | - | tig0026517:34008-34027 | Msa1429510:CDS | 30.0% |
| !!! | CCTACGAATTTTTTCTTACT+GGG | - | tig0026517:34009-34028 | Msa1429510:CDS | 30.0% |
| ! | AATAAGTGTCACTAATACAC+TGG | + | tig0026517:34607-34626 | None:intergenic | 30.0% |
| AGTGTATTAGTGACACTTAT+TGG | - | tig0026517:34606-34625 | Msa1429510:intron | 30.0% | |
| AACACAAATTAAGGAGGAAA+GGG | + | tig0026517:34632-34651 | None:intergenic | 30.0% | |
| TAACACAAATTAAGGAGGAA+AGG | + | tig0026517:34633-34652 | None:intergenic | 30.0% | |
| AGGAATAACACAAATTAAGG+AGG | + | tig0026517:34638-34657 | None:intergenic | 30.0% | |
| ! | TTGTCTCCTTTTTATGTTGA+AGG | - | tig0026517:34751-34770 | Msa1429510:CDS | 30.0% |
| TTGAGACCTTCAACATAAAA+AGG | + | tig0026517:34760-34779 | None:intergenic | 30.0% | |
| ! | AGAAGACTGAAGTGTTAAAT+TGG | + | tig0026517:35008-35027 | None:intergenic | 30.0% |
| ! | TGGTGGAATATTTGAAACAT+AGG | + | tig0026517:35095-35114 | None:intergenic | 30.0% |
| CATGGAATTTATAGTTATGG+TGG | + | tig0026517:35112-35131 | None:intergenic | 30.0% | |
| CATTGAACTACATATCTACA+TGG | + | tig0026517:35130-35149 | None:intergenic | 30.0% | |
| TTGGCTTAAGTTTCAGAAAA+AGG | - | tig0026517:35165-35184 | Msa1429510:intron | 30.0% | |
| ! | ATAAGACAACACAATGGTTT+TGG | + | tig0026517:35497-35516 | None:intergenic | 30.0% |
| TTAGCAATAAGACAACACAA+TGG | + | tig0026517:35503-35522 | None:intergenic | 30.0% | |
| ATACAGGGATTACAAAGATT+GGG | - | tig0026517:35553-35572 | Msa1429510:intron | 30.0% | |
| ! | GATTTCAGGTGAAAAAGAAA+TGG | - | tig0026517:35723-35742 | Msa1429510:intron | 30.0% |
| ACACGTAGGAAAATTGAATA+AGG | - | tig0026517:35886-35905 | Msa1429510:intron | 30.0% | |
| CACGTAGGAAAATTGAATAA+GGG | - | tig0026517:35887-35906 | Msa1429510:intron | 30.0% | |
| AGGAAAATTGAATAAGGGAA+AGG | - | tig0026517:35892-35911 | Msa1429510:intron | 30.0% | |
| ATCTGATAGTATATAGTGTC+AGG | - | tig0026517:35942-35961 | Msa1429510:intron | 30.0% | |
| TAATAGAATCTCTGGACTAA+GGG | + | tig0026517:36201-36220 | None:intergenic | 30.0% | |
| TTAATAGAATCTCTGGACTA+AGG | + | tig0026517:36202-36221 | None:intergenic | 30.0% | |
| ! | TTCATTTTCACTCACCTTTC+TGG | - | tig0026517:30858-30877 | Msa1429510:three_prime_UTR | 35.0% |
| ! | AATGCAGGAGTTTAGAACAA+GGG | + | tig0026517:30926-30945 | None:intergenic | 35.0% |
| ! | AAATGCAGGAGTTTAGAACA+AGG | + | tig0026517:30927-30946 | None:intergenic | 35.0% |
| ACCGATTGAACTCAATTACT+TGG | + | tig0026517:31025-31044 | None:intergenic | 35.0% | |
| ! | ATTCTTTTCTGTTAGAGCTC+CGG | + | tig0026517:31141-31160 | None:intergenic | 35.0% |
| GCACATACATTGTTAGGTAT+CGG | - | tig0026517:31235-31254 | Msa1429510:CDS | 35.0% | |
| CACATACATTGTTAGGTATC+GGG | - | tig0026517:31236-31255 | Msa1429510:CDS | 35.0% | |
| !! | ATGCAGTATTTGTGCTGATT+AGG | - | tig0026517:31339-31358 | Msa1429510:intron | 35.0% |
| !!! | TTTTTCTCTGGGATTACAGA+GGG | - | tig0026517:31540-31559 | Msa1429510:CDS | 35.0% |
| GCATCATTCAGTGTAATCAT+AGG | - | tig0026517:31694-31713 | Msa1429510:intron | 35.0% | |
| TTCAGTGTAATCATAGGTGT+CGG | - | tig0026517:31700-31719 | Msa1429510:intron | 35.0% | |
| ! | ATGTCAGAGCTTTAGTACAT+CGG | - | tig0026517:31959-31978 | Msa1429510:intron | 35.0% |
| ATGGCATGTTACCTACAAAA+GGG | + | tig0026517:31989-32008 | None:intergenic | 35.0% | |
| TATGGCATGTTACCTACAAA+AGG | + | tig0026517:31990-32009 | None:intergenic | 35.0% | |
| GTTCCATTGTGAAACAATGT+TGG | - | tig0026517:32321-32340 | Msa1429510:intron | 35.0% | |
| GAGAACATCACAAAAGAACT+CGG | + | tig0026517:32411-32430 | None:intergenic | 35.0% | |
| GCAATTAAAAAGACTAGGAC+AGG | + | tig0026517:32478-32497 | None:intergenic | 35.0% | |
| GATCTTTCCATAGAAAAGCA+AGG | - | tig0026517:32505-32524 | Msa1429510:CDS | 35.0% | |
| CTATAAGAGCTTATTGATCC+AGG | + | tig0026517:32613-32632 | None:intergenic | 35.0% | |
| CAAAATAGTGAACAAATGCC+AGG | + | tig0026517:32724-32743 | None:intergenic | 35.0% | |
| ! | TTTGTTCACTATTTTGCTGC+TGG | - | tig0026517:32728-32747 | Msa1429510:intron | 35.0% |
| TAGTGTGATCAACTTTGAGT+TGG | + | tig0026517:33129-33148 | None:intergenic | 35.0% | |
| GCTTACACTAAGACATTTAC+TGG | - | tig0026517:33363-33382 | Msa1429510:intron | 35.0% | |
| TCACCTGATACCTATAATAG+TGG | - | tig0026517:33621-33640 | Msa1429510:intron | 35.0% | |
| CCCAGTAAGAAAAAATTCGT+AGG | + | tig0026517:34012-34031 | None:intergenic | 35.0% | |
| TCAAAGCTTCCATTTCTGTT+CGG | - | tig0026517:34282-34301 | Msa1429510:intron | 35.0% | |
| TAGCTCCATTGTTTATTGGT+CGG | - | tig0026517:34337-34356 | Msa1429510:intron | 35.0% | |
| TGTTGGGTTTATCATCAGTA+AGG | + | tig0026517:34380-34399 | None:intergenic | 35.0% | |
| !! | AAAAGAAGGGATGGTTTGTT+GGG | + | tig0026517:34396-34415 | None:intergenic | 35.0% |
| AGAAGCCATTCTCAAAAGAA+GGG | + | tig0026517:34409-34428 | None:intergenic | 35.0% | |
| ! | ATGTTTTGTAGATCTGCACT+TGG | - | tig0026517:34529-34548 | Msa1429510:intron | 35.0% |
| AATGTAGAAACGCAACATGT+TGG | - | tig0026517:35146-35165 | Msa1429510:intron | 35.0% | |
| CCTCTGTTAAAAACATCATG+TGG | + | tig0026517:35528-35547 | None:intergenic | 35.0% | |
| !! | CCACATGATGTTTTTAACAG+AGG | - | tig0026517:35525-35544 | Msa1429510:intron | 35.0% |
| TTTAACAGAGGAGATGATAC+AGG | - | tig0026517:35537-35556 | Msa1429510:intron | 35.0% | |
| TTAACAGAGGAGATGATACA+GGG | - | tig0026517:35538-35557 | Msa1429510:intron | 35.0% | |
| GATACAGGGATTACAAAGAT+TGG | - | tig0026517:35552-35571 | Msa1429510:intron | 35.0% | |
| CAGTACATGGATGTTACTAT+GGG | + | tig0026517:35629-35648 | None:intergenic | 35.0% | |
| ATTCAGAGAAATGCAGTACA+TGG | + | tig0026517:35642-35661 | None:intergenic | 35.0% | |
| ATGAGTATTCCTTGGATTTC+AGG | - | tig0026517:35709-35728 | Msa1429510:intron | 35.0% | |
| !! | TCTTTTTCACCTGAAATCCA+AGG | + | tig0026517:35721-35740 | None:intergenic | 35.0% |
| CAGTAAAGGTTTACGAATGT+GGG | + | tig0026517:35860-35879 | None:intergenic | 35.0% | |
| ! | AGAAGAGTGTAAGGTATCTT+TGG | - | tig0026517:35965-35984 | Msa1429510:intron | 35.0% |
| AGAACGTGTTTCTCAAACTA+GGG | - | tig0026517:36015-36034 | Msa1429510:CDS | 35.0% | |
| TTAAGCCATCCAACAAAGAT+TGG | - | tig0026517:36218-36237 | Msa1429510:five_prime_UTR | 35.0% | |
| CAAATTGTGACAAGTTCCAG+CGG | + | tig0026517:30635-30654 | None:intergenic | 40.0% | |
| !! | GTTCTGGTTCCTTTGCTATA+TGG | - | tig0026517:30722-30741 | Msa1429510:three_prime_UTR | 40.0% |
| CTACAACGCGCGTAAATAAA+AGG | + | tig0026517:30759-30778 | None:intergenic | 40.0% | |
| GTGAGTGAAAATGAAGCTAG+GGG | + | tig0026517:30853-30872 | None:intergenic | 40.0% | |
| GGTGAGTGAAAATGAAGCTA+GGG | + | tig0026517:30854-30873 | None:intergenic | 40.0% | |
| AGGTGAGTGAAAATGAAGCT+AGG | + | tig0026517:30855-30874 | None:intergenic | 40.0% | |
| CTTACTTGCTTGCCAAACTT+TGG | - | tig0026517:31090-31109 | Msa1429510:CDS | 40.0% | |
| CTTGCCAAACTTTGGATTGT+CGG | - | tig0026517:31098-31117 | Msa1429510:CDS | 40.0% | |
| TTGCCAAACTTTGGATTGTC+GGG | - | tig0026517:31099-31118 | Msa1429510:CDS | 40.0% | |
| !! | ATACATTGTTAGGTATCGGG+TGG | - | tig0026517:31239-31258 | Msa1429510:CDS | 40.0% |
| ! | TATTGATTAGGAGCGGTTAC+AGG | - | tig0026517:31391-31410 | Msa1429510:intron | 40.0% |
| CTCTCTGCTCAAAACCAATA+AGG | + | tig0026517:31496-31515 | None:intergenic | 40.0% | |
| AGAGAAATGTCTCTTCTCTG+AGG | - | tig0026517:31514-31533 | Msa1429510:CDS | 40.0% | |
| !!! | CTTTTTCTCTGGGATTACAG+AGG | - | tig0026517:31539-31558 | Msa1429510:CDS | 40.0% |
| ! | ATTCGGGTTCCTATCATACA+TGG | - | tig0026517:31622-31641 | Msa1429510:intron | 40.0% |
| TTCCTATCATACATGGACAC+CGG | - | tig0026517:31629-31648 | Msa1429510:intron | 40.0% | |
| TATGAAGCACATACACTCCT+AGG | + | tig0026517:31762-31781 | None:intergenic | 40.0% | |
| AAGGTCACTTGTTCAAGTCT+TGG | - | tig0026517:31854-31873 | Msa1429510:intron | 40.0% | |
| CTGTGTCCAATACACCAAAA+TGG | - | tig0026517:31910-31929 | Msa1429510:intron | 40.0% | |
| TGTCCAATACACCAAAATGG+TGG | - | tig0026517:31913-31932 | Msa1429510:intron | 40.0% | |
| GTCCAATACACCAAAATGGT+GGG | - | tig0026517:31914-31933 | Msa1429510:intron | 40.0% | |
| ! | TGTCAGAGCTTTAGTACATC+GGG | - | tig0026517:31960-31979 | Msa1429510:intron | 40.0% |
| TACTCATAGCTTCAGCTCTA+AGG | + | tig0026517:32085-32104 | None:intergenic | 40.0% | |
| ATCATTCTTCAGATTCCCAG+TGG | + | tig0026517:32138-32157 | None:intergenic | 40.0% | |
| ACAAGAACAAGGAGATGATC+AGG | + | tig0026517:32161-32180 | None:intergenic | 40.0% | |
| AGATACCATGGACAAGAACA+AGG | + | tig0026517:32172-32191 | None:intergenic | 40.0% | |
| TTGTTCTTGTCCATGGTATC+TGG | - | tig0026517:32171-32190 | Msa1429510:CDS | 40.0% | |
| ATTACCTAGACCAGATACCA+TGG | + | tig0026517:32184-32203 | None:intergenic | 40.0% | |
| TAAAAGATAGTCTGAACGGC+TGG | - | tig0026517:32240-32259 | Msa1429510:intron | 40.0% | |
| AAAAAAATGTGCCACGCACA+CGG | + | tig0026517:32531-32550 | None:intergenic | 40.0% | |
| !!! | TGTTTTAACTGATACAGCCC+AGG | - | tig0026517:32780-32799 | Msa1429510:intron | 40.0% |
| !! | GATCAACTTTGAGTTGGCTA+AGG | + | tig0026517:33123-33142 | None:intergenic | 40.0% |
| TTTACTGGGATTGATGAAGC+TGG | - | tig0026517:33378-33397 | Msa1429510:intron | 40.0% | |
| GCATGACCTGTTGTGATAAA+AGG | + | tig0026517:33506-33525 | None:intergenic | 40.0% | |
| AAATAGGCCTCCAAGAGAAT+GGG | + | tig0026517:33574-33593 | None:intergenic | 40.0% | |
| TGGCCACTATTATAGGTATC+AGG | + | tig0026517:33627-33646 | None:intergenic | 40.0% | |
| !! | ATCAGGTTGGCCACTATTAT+AGG | + | tig0026517:33634-33653 | None:intergenic | 40.0% |
| !! | TCACAGACAGACTTTTCAAG+AGG | - | tig0026517:33681-33700 | Msa1429510:intron | 40.0% |
| !! | CACAGACAGACTTTTCAAGA+GGG | - | tig0026517:33682-33701 | Msa1429510:intron | 40.0% |
| !! | TTTTCAAGAGGGATGATTGC+TGG | - | tig0026517:33693-33712 | Msa1429510:intron | 40.0% |
| AGCAATGGAAGAGAAAACGA+TGG | + | tig0026517:34117-34136 | None:intergenic | 40.0% | |
| TGCATGCAATGAAGATCTTG+TGG | + | tig0026517:34185-34204 | None:intergenic | 40.0% | |
| !!! | GCAACAAGCTTTTCTAGGAT+CGG | + | tig0026517:34312-34331 | None:intergenic | 40.0% |
| CCAATAAACAATGGAGCTAC+AGG | + | tig0026517:34336-34355 | None:intergenic | 40.0% | |
| CCTGTAGCTCCATTGTTTAT+TGG | - | tig0026517:34333-34352 | Msa1429510:intron | 40.0% | |
| ! | CAAAAGAAGGGATGGTTTGT+TGG | + | tig0026517:34397-34416 | None:intergenic | 40.0% |
| !! | ACCATCCCTTCTTTTGAGAA+TGG | - | tig0026517:34401-34420 | Msa1429510:intron | 40.0% |
| CAGAAGCCATTCTCAAAAGA+AGG | + | tig0026517:34410-34429 | None:intergenic | 40.0% | |
| ! | AGTGTCACTAATACACTGGA+AGG | + | tig0026517:34603-34622 | None:intergenic | 40.0% |
| CCACCCAACCATATCTATAT+AGG | + | tig0026517:34665-34684 | None:intergenic | 40.0% | |
| CCTATATAGATATGGTTGGG+TGG | - | tig0026517:34662-34681 | Msa1429510:intron | 40.0% | |
| AAGTTCGATTTCCCTCCTTA+TGG | + | tig0026517:34698-34717 | None:intergenic | 40.0% | |
| ATAAGGAGGGAAATCGAACT+TGG | - | tig0026517:34697-34716 | Msa1429510:CDS | 40.0% | |
| AGTAGTTGAACTCCTGAATG+TGG | - | tig0026517:34868-34887 | Msa1429510:intron | 40.0% | |
| TGAACTCCTGAATGTGGTTA+AGG | - | tig0026517:34874-34893 | Msa1429510:intron | 40.0% | |
| GCATTATAGTCAGGCGTTAT+AGG | + | tig0026517:34934-34953 | None:intergenic | 40.0% | |
| AAAGGAAAACACCTGATCTG+TGG | - | tig0026517:35183-35202 | Msa1429510:intron | 40.0% | |
| GCTTGTATCCATCCAAAGAT+TGG | + | tig0026517:35277-35296 | None:intergenic | 40.0% | |
| AGGGATTACAAAGATTGGGA+TGG | - | tig0026517:35557-35576 | Msa1429510:intron | 40.0% | |
| TCAACTTTCACTCAGCAGTT+TGG | - | tig0026517:35593-35612 | Msa1429510:intron | 40.0% | |
| ATGTTACTATGGGCAAAGAG+AGG | + | tig0026517:35619-35638 | None:intergenic | 40.0% | |
| GCAGTACATGGATGTTACTA+TGG | + | tig0026517:35630-35649 | None:intergenic | 40.0% | |
| AAGAAATGGCTTCACAATGC+TGG | - | tig0026517:35737-35756 | Msa1429510:intron | 40.0% | |
| CCAGTAAAGGTTTACGAATG+TGG | + | tig0026517:35861-35880 | None:intergenic | 40.0% | |
| CCACATTCGTAAACCTTTAC+TGG | - | tig0026517:35858-35877 | Msa1429510:intron | 40.0% | |
| CTACGTGTATAGACCAGTAA+AGG | + | tig0026517:35874-35893 | None:intergenic | 40.0% | |
| ! | CTTTACTGGTCTATACACGT+AGG | - | tig0026517:35872-35891 | Msa1429510:intron | 40.0% |
| GAGAACGTGTTTCTCAAACT+AGG | - | tig0026517:36014-36033 | Msa1429510:CDS | 40.0% | |
| GAACGTGTTTCTCAAACTAG+GGG | - | tig0026517:36016-36035 | Msa1429510:CDS | 40.0% | |
| AACGTGTTTCTCAAACTAGG+GGG | - | tig0026517:36017-36036 | Msa1429510:CDS | 40.0% | |
| GGATGGCTTAATAGAATCTC+TGG | + | tig0026517:36209-36228 | None:intergenic | 40.0% | |
| !!! | TGCCTCTTGGTTTTTTAGCA+CGG | + | tig0026517:36277-36296 | None:intergenic | 40.0% |
| !! | AAAACCAAGAGGCATCGTTA+CGG | - | tig0026517:36283-36302 | Msa1429510:five_prime_UTR | 40.0% |
| AATTGTGAGCCAGATGAGCT+GGG | + | tig0026517:30552-30571 | None:intergenic | 45.0% | |
| TGTTATGACACAACAACCGC+TGG | - | tig0026517:30616-30635 | Msa1429510:three_prime_UTR | 45.0% | |
| ATGCTGCTGCCATATAGCAA+AGG | + | tig0026517:30734-30753 | None:intergenic | 45.0% | |
| AGTGAAAATGAAGCTAGGGG+TGG | + | tig0026517:30850-30869 | None:intergenic | 45.0% | |
| GTTCCCGACAATCCAAAGTT+TGG | + | tig0026517:31105-31124 | None:intergenic | 45.0% | |
| !! | AGGTATCGGGTGGTATTGAT+AGG | - | tig0026517:31249-31268 | Msa1429510:CDS | 45.0% |
| !! | GGTATCGGGTGGTATTGATA+GGG | - | tig0026517:31250-31269 | Msa1429510:CDS | 45.0% |
| !! | TGTGCTGATTAGGAGCAGTT+AGG | - | tig0026517:31349-31368 | Msa1429510:intron | 45.0% |
| ACCATTTGGCCACAACAGTA+GGG | - | tig0026517:31444-31463 | Msa1429510:CDS | 45.0% | |
| !! | TCTCTGAGGAGCTTTTTCTC+TGG | - | tig0026517:31528-31547 | Msa1429510:CDS | 45.0% |
| !! | CTCTGAGGAGCTTTTTCTCT+GGG | - | tig0026517:31529-31548 | Msa1429510:CDS | 45.0% |
| !! | TGTAATCATAGGTGTCGGTG+TGG | - | tig0026517:31705-31724 | Msa1429510:intron | 45.0% |
| !! | GTAATCATAGGTGTCGGTGT+GGG | - | tig0026517:31706-31725 | Msa1429510:intron | 45.0% |
| ATACACTCCTAGGTGTGTCA+CGG | + | tig0026517:31752-31771 | None:intergenic | 45.0% | |
| ! | GTTGCTGTTACGTGACAGAA+AGG | - | tig0026517:31835-31854 | Msa1429510:intron | 45.0% |
| !! | GTCCCACCATTTTGGTGTAT+TGG | + | tig0026517:31919-31938 | None:intergenic | 45.0% |
| ! | AAAAAGGGGTCCCACCATTT+TGG | + | tig0026517:31927-31946 | None:intergenic | 45.0% |
| !! | AAATGGTGGGACCCCTTTTT+CGG | - | tig0026517:31927-31946 | Msa1429510:intron | 45.0% |
| ! | CTAAAGCTCTGACATACGCA+GGG | + | tig0026517:31954-31973 | None:intergenic | 45.0% |
| ! | ACTAAAGCTCTGACATACGC+AGG | + | tig0026517:31955-31974 | None:intergenic | 45.0% |
| ATGTTGGAGAGAACTTCTGC+AGG | - | tig0026517:32032-32051 | Msa1429510:intron | 45.0% | |
| ACTTCTGCAGGTGCAAACAA+AGG | - | tig0026517:32044-32063 | Msa1429510:intron | 45.0% | |
| AGCTATGAGTACTACCACTC+AGG | - | tig0026517:32094-32113 | Msa1429510:intron | 45.0% | |
| GCTATGAGTACTACCACTCA+GGG | - | tig0026517:32095-32114 | Msa1429510:intron | 45.0% | |
| AAGTCTCCTGCTAAAACCAC+TGG | - | tig0026517:32119-32138 | Msa1429510:intron | 45.0% | |
| AGTCTCCTGCTAAAACCACT+GGG | - | tig0026517:32120-32139 | Msa1429510:intron | 45.0% | |
| !!! | AGATTCCCAGTGGTTTTAGC+AGG | + | tig0026517:32128-32147 | None:intergenic | 45.0% |
| CATCTCCTTGTTCTTGTCCA+TGG | - | tig0026517:32164-32183 | Msa1429510:CDS | 45.0% | |
| TTGTCCATGGTATCTGGTCT+AGG | - | tig0026517:32177-32196 | Msa1429510:intron | 45.0% | |
| CTCATGTGAGCAAGTGTTTG+AGG | - | tig0026517:32428-32447 | Msa1429510:CDS | 45.0% | |
| TGTACTGTTTGTACCGCAAG+CGG | - | tig0026517:32696-32715 | Msa1429510:intron | 45.0% | |
| !!! | GCTGGTTTTTGCTCTCCAAT+TGG | - | tig0026517:32746-32765 | Msa1429510:intron | 45.0% |
| TTGGGATGATTGCGTTGTTG+CGG | - | tig0026517:33081-33100 | Msa1429510:intron | 45.0% | |
| ! | TTTTTGTCCAATGCAGCGCA+CGG | - | tig0026517:33448-33467 | Msa1429510:CDS | 45.0% |
| AAGGATATTCGCTTCAGGCT+CGG | + | tig0026517:33546-33565 | None:intergenic | 45.0% | |
| CCAGAAAGGATATTCGCTTC+AGG | + | tig0026517:33551-33570 | None:intergenic | 45.0% | |
| CCTGAAGCGAATATCCTTTC+TGG | - | tig0026517:33548-33567 | Msa1429510:intron | 45.0% | |
| CAAATAGGCCTCCAAGAGAA+TGG | + | tig0026517:33575-33594 | None:intergenic | 45.0% | |
| !! | AGTTTGCTGGATCATCAGGT+TGG | + | tig0026517:33647-33666 | None:intergenic | 45.0% |
| ! | TTTTCCATCTCGCAGTTTGC+TGG | + | tig0026517:33660-33679 | None:intergenic | 45.0% |
| ACTTTAGCAACTCCGCATCT+TGG | - | tig0026517:33738-33757 | Msa1429510:intron | 45.0% | |
| ATCGGAACACCGAACAGAAA+TGG | + | tig0026517:34294-34313 | None:intergenic | 45.0% | |
| CCAGTCCGACCAATAAACAA+TGG | + | tig0026517:34345-34364 | None:intergenic | 45.0% | |
| CCATTGTTTATTGGTCGGAC+TGG | - | tig0026517:34342-34361 | Msa1429510:intron | 45.0% | |
| GCCATTCTCAAAAGAAGGGA+TGG | + | tig0026517:34405-34424 | None:intergenic | 45.0% | |
| ATGGCTTCTGACTGTGAAGA+TGG | - | tig0026517:34420-34439 | Msa1429510:intron | 45.0% | |
| TTCGATTTCCCTCCTTATGG+AGG | + | tig0026517:34695-34714 | None:intergenic | 45.0% | |
| GAGGGAAATCGAACTTGGTA+AGG | - | tig0026517:34702-34721 | Msa1429510:CDS | 45.0% | |
| TACACGCCTTAACCACATTC+AGG | + | tig0026517:34883-34902 | None:intergenic | 45.0% | |
| AACACCTGATCTGTGGAAGT+TGG | - | tig0026517:35190-35209 | Msa1429510:intron | 45.0% | |
| ACACCTGATCTGTGGAAGTT+GGG | - | tig0026517:35191-35210 | Msa1429510:intron | 45.0% | |
| TATCCATCCAAAGATTGGCG+TGG | + | tig0026517:35272-35291 | None:intergenic | 45.0% | |
| ! | AGTGTCAGGAGAAGAGTGTA+AGG | - | tig0026517:35956-35975 | Msa1429510:intron | 45.0% |
| GTCCGTGCTAAAAAACCAAG+AGG | - | tig0026517:36272-36291 | Msa1429510:five_prime_UTR | 45.0% | |
| !! | AAACCAAGAGGCATCGTTAC+GGG | - | tig0026517:36284-36303 | Msa1429510:five_prime_UTR | 45.0% |
| GTTACGGGCACAAGATCATT+TGG | - | tig0026517:36299-36318 | Msa1429510:five_prime_UTR | 45.0% | |
| !!! | ATTTTAATATATAGTTATTT+AGG | - | tig0026517:31294-31313 | Msa1429510:CDS | 5.0% |
| !! | TAATATTAATATTAAATATC+TGG | - | tig0026517:34800-34819 | Msa1429510:intron | 5.0% |
| CAATTGTGAGCCAGATGAGC+TGG | + | tig0026517:30553-30572 | None:intergenic | 50.0% | |
| TGGAGGAAGAAGAGCAACAG+GGG | + | tig0026517:30830-30849 | None:intergenic | 50.0% | |
| GTGGAGGAAGAAGAGCAACA+GGG | + | tig0026517:30831-30850 | None:intergenic | 50.0% | |
| GAAAATGAAGCTAGGGGTGG+AGG | + | tig0026517:30847-30866 | None:intergenic | 50.0% | |
| GACCATTTGGCCACAACAGT+AGG | - | tig0026517:31443-31462 | Msa1429510:CDS | 50.0% | |
| CCATTTGGCCACAACAGTAG+GGG | - | tig0026517:31445-31464 | Msa1429510:CDS | 50.0% | |
| CATTTGGCCACAACAGTAGG+GGG | - | tig0026517:31446-31465 | Msa1429510:CDS | 50.0% | |
| CTGAATTCCCCCTACTGTTG+TGG | + | tig0026517:31456-31475 | None:intergenic | 50.0% | |
| GTCCGGTGTCCATGTATGAT+AGG | + | tig0026517:31634-31653 | None:intergenic | 50.0% | |
| ATCATACATGGACACCGGAC+AGG | - | tig0026517:31634-31653 | Msa1429510:intron | 50.0% | |
| AGACTGTGTCGCATTCTCTC+TGG | - | tig0026517:31781-31800 | Msa1429510:intron | 50.0% | |
| GACTGTGTCGCATTCTCTCT+GGG | - | tig0026517:31782-31801 | Msa1429510:intron | 50.0% | |
| ACTGTGTCGCATTCTCTCTG+GGG | - | tig0026517:31783-31802 | Msa1429510:intron | 50.0% | |
| ATACGCAGGGTCCGAAAAAG+GGG | + | tig0026517:31941-31960 | None:intergenic | 50.0% | |
| CATACGCAGGGTCCGAAAAA+GGG | + | tig0026517:31942-31961 | None:intergenic | 50.0% | |
| ACATACGCAGGGTCCGAAAA+AGG | + | tig0026517:31943-31962 | None:intergenic | 50.0% | |
| AAGATAGTCTGAACGGCTGG+TGG | - | tig0026517:32243-32262 | Msa1429510:intron | 50.0% | |
| !! | CACACGGCCTTGCTTTTCTA+TGG | + | tig0026517:32515-32534 | None:intergenic | 50.0% |
| ! | TCCTTTCTGGCCCATTCTCT+TGG | - | tig0026517:33561-33580 | Msa1429510:intron | 50.0% |
| TCCAAGAGAATGGGCCAGAA+AGG | + | tig0026517:33565-33584 | None:intergenic | 50.0% | |
| ! | TTTCTGGCCCATTCTCTTGG+AGG | - | tig0026517:33564-33583 | Msa1429510:intron | 50.0% |
| !! | TCGCAGTTTGCTGGATCATC+AGG | + | tig0026517:33651-33670 | None:intergenic | 50.0% |
| TGATCCAGCAAACTGCGAGA+TGG | - | tig0026517:33653-33672 | Msa1429510:intron | 50.0% | |
| AAGAGGGATGATTGCTGGAC+TGG | - | tig0026517:33698-33717 | Msa1429510:intron | 50.0% | |
| TTCCCTCTTACGCCAAGATG+CGG | + | tig0026517:33753-33772 | None:intergenic | 50.0% | |
| ! | CAGGCGCAACAAGCTTTTCT+AGG | + | tig0026517:34317-34336 | None:intergenic | 50.0% |
| CTTCCCAACTTCCACAGATC+AGG | + | tig0026517:35197-35216 | None:intergenic | 50.0% | |
| CTGATCTGTGGAAGTTGGGA+AGG | - | tig0026517:35195-35214 | Msa1429510:intron | 50.0% | |
| AGGTCCATCGGAAGGAATTG+GGG | + | tig0026517:35324-35343 | None:intergenic | 50.0% | |
| GAGGTCCATCGGAAGGAATT+GGG | + | tig0026517:35325-35344 | None:intergenic | 50.0% | |
| TGAGGTCCATCGGAAGGAAT+TGG | + | tig0026517:35326-35345 | None:intergenic | 50.0% | |
| GGAAATTGAGGTCCATCGGA+AGG | + | tig0026517:35332-35351 | None:intergenic | 50.0% | |
| CGGAGGAAATTGAGGTCCAT+CGG | + | tig0026517:35336-35355 | None:intergenic | 50.0% | |
| CGATGGACCTCAATTTCCTC+CGG | - | tig0026517:35334-35353 | Msa1429510:intron | 50.0% | |
| TCCTTTGCTTTCACTGCCTC+CGG | + | tig0026517:35356-35375 | None:intergenic | 50.0% | |
| TGGCTTCACAATGCTGGTGT+AGG | - | tig0026517:35743-35762 | Msa1429510:intron | 50.0% | |
| AGCAACTTGTGGTTCCAACG+CGG | + | tig0026517:36244-36263 | None:intergenic | 50.0% | |
| GACTCAACAGCAGCAACTTG+TGG | + | tig0026517:36255-36274 | None:intergenic | 50.0% | |
| GGAGGAAGAAGAGCAACAGG+GGG | + | tig0026517:30829-30848 | None:intergenic | 55.0% | |
| GGTGGAGGAAGAAGAGCAAC+AGG | + | tig0026517:30832-30851 | None:intergenic | 55.0% | |
| CTGTTAGAGCTCCGGTTCAG+CGG | + | tig0026517:31133-31152 | None:intergenic | 55.0% | |
| CCCCTACTGTTGTGGCCAAA+TGG | + | tig0026517:31448-31467 | None:intergenic | 55.0% | |
| CACCGGACAGGACACAAACA+CGG | - | tig0026517:31646-31665 | Msa1429510:intron | 55.0% | |
| GTCCGTGTTTGTGTCCTGTC+CGG | + | tig0026517:31651-31670 | None:intergenic | 55.0% | |
| !! | ATAGGTGTCGGTGTGGGACA+CGG | - | tig0026517:31712-31731 | Msa1429510:intron | 55.0% |
| TCCTAGGTGTGTCACGGTGT+CGG | + | tig0026517:31746-31765 | None:intergenic | 55.0% | |
| CTGTGTCGCATTCTCTCTGG+GGG | - | tig0026517:31784-31803 | Msa1429510:intron | 55.0% | |
| TGTGTCGCATTCTCTCTGGG+GGG | - | tig0026517:31785-31804 | Msa1429510:intron | 55.0% | |
| ! | ACATCGGGCTGCCCTTTTGT+AGG | - | tig0026517:31975-31994 | Msa1429510:intron | 55.0% |
| AGCAGGAGACTTTCCCTGAG+TGG | + | tig0026517:32111-32130 | None:intergenic | 55.0% | |
| ACTGATACAGCCCAGGTGAC+TGG | - | tig0026517:32787-32806 | Msa1429510:intron | 55.0% | |
| CCGCATAACTCCAGTCACCT+GGG | + | tig0026517:32800-32819 | None:intergenic | 55.0% | |
| CCCAGGTGACTGGAGTTATG+CGG | - | tig0026517:32797-32816 | Msa1429510:intron | 55.0% | |
| TCCGCATAACTCCAGTCACC+TGG | + | tig0026517:32801-32820 | None:intergenic | 55.0% | |
| AGGTGACTGGAGTTATGCGG+AGG | - | tig0026517:32800-32819 | Msa1429510:intron | 55.0% | |
| TTCAGAACCGTGCGCTGCAT+TGG | + | tig0026517:33458-33477 | None:intergenic | 55.0% | |
| ACTCCGCATCTTGGCGTAAG+AGG | - | tig0026517:33747-33766 | Msa1429510:intron | 55.0% | |
| CTCCGCATCTTGGCGTAAGA+GGG | - | tig0026517:33748-33767 | Msa1429510:intron | 55.0% | |
| AAGATTGGCGTGGAGGCTGT+CGG | + | tig0026517:35262-35281 | None:intergenic | 55.0% | |
| ACAGCCTCCACGCCAATCTT+TGG | - | tig0026517:35262-35281 | Msa1429510:intron | 55.0% | |
| CCATCCAAAGATTGGCGTGG+AGG | + | tig0026517:35269-35288 | None:intergenic | 55.0% | |
| CCTCCACGCCAATCTTTGGA+TGG | - | tig0026517:35266-35285 | Msa1429510:intron | 55.0% | |
| TGTCCCCCAATTCCTTCCGA+TGG | - | tig0026517:35317-35336 | Msa1429510:intron | 55.0% | |
| GGTCCATCGGAAGGAATTGG+GGG | + | tig0026517:35323-35342 | None:intergenic | 55.0% | |
| TGGACCTCAATTTCCTCCGG+AGG | - | tig0026517:35337-35356 | Msa1429510:intron | 55.0% | |
| ACTGCCTCCGGAGGAAATTG+AGG | + | tig0026517:35344-35363 | None:intergenic | 55.0% | |
| TTTGCTTTCACTGCCTCCGG+AGG | + | tig0026517:35353-35372 | None:intergenic | 55.0% | |
| TCCGGAGGCAGTGAAAGCAA+AGG | - | tig0026517:35352-35371 | Msa1429510:intron | 55.0% | |
| CGCGGCCAATCTTTGTTGGA+TGG | + | tig0026517:36226-36245 | None:intergenic | 55.0% | |
| CCAACGCGGCCAATCTTTGT+TGG | + | tig0026517:36230-36249 | None:intergenic | 55.0% | |
| ! | CCAACAAAGATTGGCCGCGT+TGG | - | tig0026517:36227-36246 | Msa1429510:five_prime_UTR | 55.0% |
| ATGGCCACCGCCTACCAATC+AGG | + | tig0026517:30529-30548 | None:intergenic | 60.0% | |
| GTGAGCCAGATGAGCTGGGA+TGG | + | tig0026517:30548-30567 | None:intergenic | 60.0% | |
| CAGGGGGAGGATGAGGAAGA+AGG | + | tig0026517:30813-30832 | None:intergenic | 60.0% | |
| AGAGCAACAGGGGGAGGATG+AGG | + | tig0026517:30820-30839 | None:intergenic | 60.0% | |
| GGAAGAAGAGCAACAGGGGG+AGG | + | tig0026517:30826-30845 | None:intergenic | 60.0% | |
| GGGAACCCTTTCCGCTGAAC+CGG | - | tig0026517:31119-31138 | Msa1429510:intron | 60.0% | |
| GAGCTCCGGTTCAGCGGAAA+GGG | + | tig0026517:31127-31146 | None:intergenic | 60.0% | |
| AGAGCTCCGGTTCAGCGGAA+AGG | + | tig0026517:31128-31147 | None:intergenic | 60.0% | |
| TCCGACACCGTGACACACCT+AGG | - | tig0026517:31742-31761 | Msa1429510:intron | 60.0% | |
| ! | GTGTCGCATTCTCTCTGGGG+GGG | - | tig0026517:31786-31805 | Msa1429510:intron | 60.0% |
| ! | TGTCGCATTCTCTCTGGGGG+GGG | - | tig0026517:31787-31806 | Msa1429510:intron | 60.0% |
| GAAAAGCAAGGCCGTGTGCG+TGG | - | tig0026517:32517-32536 | Msa1429510:CDS | 60.0% | |
| TTTGTACCGCAAGCGGTGCC+TGG | - | tig0026517:32703-32722 | Msa1429510:intron | 60.0% | |
| ! | CAAATGCCAGGCACCGCTTG+CGG | + | tig0026517:32712-32731 | None:intergenic | 60.0% |
| !! | GCAGCGCACGGTTCTGAATC+AGG | - | tig0026517:33460-33479 | Msa1429510:CDS | 60.0% |
| GCGCACGTCCTCCATAAGGA+GGG | - | tig0026517:34684-34703 | Msa1429510:CDS | 60.0% | |
| GTGCCCGTAACGATGCCTCT+TGG | + | tig0026517:36290-36309 | None:intergenic | 60.0% | |
| GGTGGCCATCCCAGCTCATC+TGG | - | tig0026517:30540-30559 | Msa1429510:three_prime_UTR | 65.0% | |
| ! | GTCGCATTCTCTCTGGGGGG+GGG | - | tig0026517:31788-31807 | Msa1429510:intron | 65.0% |
| ! | TCGCATTCTCTCTGGGGGGG+GGG | - | tig0026517:31789-31808 | Msa1429510:intron | 65.0% |
| GGTGGCGCACGTCCTCCATA+AGG | - | tig0026517:34680-34699 | Msa1429510:CDS | 65.0% | |
| GGCGCACGTCCTCCATAAGG+AGG | - | tig0026517:34683-34702 | Msa1429510:CDS | 65.0% | |
| ! | CGCATTCTCTCTGGGGGGGG+GGG | - | tig0026517:31790-31809 | Msa1429510:intron | 70.0% |
| ! | GCATTCTCTCTGGGGGGGGG+GGG | - | tig0026517:31791-31810 | Msa1429510:intron | 70.0% |
| ! | CATTCTCTCTGGGGGGGGGG+GGG | - | tig0026517:31792-31811 | Msa1429510:intron | 70.0% |
| ! | ATTCTCTCTGGGGGGGGGGG+GGG | - | tig0026517:31793-31812 | Msa1429510:intron | 70.0% |
| ! | TTCTCTCTGGGGGGGGGGGG+GGG | - | tig0026517:31794-31813 | Msa1429510:intron | 75.0% |
| GGGGGGGGGTCTTGGCGCAA+CGG | - | tig0026517:31808-31827 | Msa1429510:intron | 75.0% | |
| ! | CTGGGGGGGGGGGGGGGTCT+TGG | - | tig0026517:31800-31819 | Msa1429510:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026517 | gene | 30524 | 36339 | 30524 | ID=Msa1429510;Name=Msa1429510 |
| tig0026517 | mRNA | 30524 | 36339 | 30524 | ID=Msa1429510-mRNA-1;Parent=Msa1429510;Name=Msa1429510-mRNA-1;_AED=0.17;_eAED=0.17;_QI=217|1|1|1|0.9|0.81|11|507|438 |
| tig0026517 | exon | 30524 | 31132 | 30524 | ID=Msa1429510-mRNA-1:exon:6579;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 31221 | 31318 | 31221 | ID=Msa1429510-mRNA-1:exon:6578;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 31438 | 31597 | 31438 | ID=Msa1429510-mRNA-1:exon:6577;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 32140 | 32192 | 32140 | ID=Msa1429510-mRNA-1:exon:6576;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 32268 | 32323 | 32268 | ID=Msa1429510-mRNA-1:exon:6575;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 32412 | 32575 | 32412 | ID=Msa1429510-mRNA-1:exon:6574;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 33084 | 33344 | 33084 | ID=Msa1429510-mRNA-1:exon:6573;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 33444 | 33514 | 33444 | ID=Msa1429510-mRNA-1:exon:6572;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 33999 | 34066 | 33999 | ID=Msa1429510-mRNA-1:exon:6571;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 34665 | 34809 | 34665 | ID=Msa1429510-mRNA-1:exon:6570;Parent=Msa1429510-mRNA-1 |
| tig0026517 | exon | 35984 | 36339 | 35984 | ID=Msa1429510-mRNA-1:exon:6569;Parent=Msa1429510-mRNA-1 |
| tig0026517 | five_prime_UTR | 36123 | 36339 | 36123 | ID=Msa1429510-mRNA-1:five_prime_utr;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 35984 | 36122 | 35984 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 34665 | 34809 | 34665 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 33999 | 34066 | 33999 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 33444 | 33514 | 33444 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 33084 | 33344 | 33084 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 32412 | 32575 | 32412 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 32268 | 32323 | 32268 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 32140 | 32192 | 32140 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 31438 | 31597 | 31438 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 31221 | 31318 | 31221 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | CDS | 31031 | 31132 | 31031 | ID=Msa1429510-mRNA-1:cds;Parent=Msa1429510-mRNA-1 |
| tig0026517 | three_prime_UTR | 30524 | 31030 | 30524 | ID=Msa1429510-mRNA-1:three_prime_utr;Parent=Msa1429510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
