Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413190 | sp|Q08448|LPL1_YEAST | 26.050 | 238 | 132 | 8 | 84 | 311 | 6 | 209 | 4.77e-16 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413190 | A0A072V404 | 97.039 | 439 | 12 | 1 | 1 | 438 | 1 | 439 | 0.0 | 880 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1413190 | Msa1429510 | 0.995340 | 2.657839e-215 | -8.615850e-47 |
| Msa1413190 | Msa1456620 | 0.801105 | 1.053248e-48 | -8.615850e-47 |
| Msa1413190 | Msa1462780 | -0.813951 | 1.973974e-51 | -8.615850e-47 |
| Msa0625900 | Msa1413190 | 0.806022 | 1.006356e-49 | -8.615850e-47 |
| Msa0663690 | Msa1413190 | 0.801039 | 1.086871e-48 | -8.615850e-47 |
| Msa0705520 | Msa1413190 | -0.829281 | 5.619682e-55 | -8.615850e-47 |
| Msa0720130 | Msa1413190 | 0.809206 | 2.121733e-50 | -8.615850e-47 |
| Msa0761830 | Msa1413190 | -0.815174 | 1.057978e-51 | -8.615850e-47 |
| Msa0802950 | Msa1413190 | 0.817684 | 2.903065e-52 | -8.615850e-47 |
| Msa0807870 | Msa1413190 | 0.800130 | 1.664628e-48 | -8.615850e-47 |
| Msa0143280 | Msa1413190 | 0.800979 | 1.117573e-48 | -8.615850e-47 |
| Msa0180100 | Msa1413190 | 0.805823 | 1.108125e-49 | -8.615850e-47 |
| Msa0184510 | Msa1413190 | 0.809554 | 1.786943e-50 | -8.615850e-47 |
| Msa0194750 | Msa1413190 | 0.803404 | 3.543318e-49 | -8.615850e-47 |
| Msa0225070 | Msa1413190 | 0.838781 | 2.345519e-57 | -8.615850e-47 |
| Msa0236690 | Msa1413190 | 0.802777 | 4.776756e-49 | -8.615850e-47 |
| Msa0238140 | Msa1413190 | -0.802083 | 6.638085e-49 | -8.615850e-47 |
| Msa1225650 | Msa1413190 | 0.989337 | 1.083377e-177 | -8.615850e-47 |
| Msa1228600 | Msa1413190 | 0.807386 | 5.184064e-50 | -8.615850e-47 |
| Msa1297220 | Msa1413190 | 0.807425 | 5.086164e-50 | -8.615850e-47 |
| Msa1323260 | Msa1413190 | 0.835972 | 1.228969e-56 | -8.615850e-47 |
| Msa1327690 | Msa1413190 | 0.814944 | 1.190092e-51 | -8.615850e-47 |
| Msa1343450 | Msa1413190 | 0.821987 | 3.013927e-53 | -8.615850e-47 |
| Msa0378310 | Msa1413190 | 0.801727 | 7.853771e-49 | -8.615850e-47 |
| Msa0392090 | Msa1413190 | 0.825313 | 5.018547e-54 | -8.615850e-47 |
| Msa0470000 | Msa1413190 | 0.813648 | 2.300958e-51 | -8.615850e-47 |
| Msa0470040 | Msa1413190 | 0.834199 | 3.441320e-56 | -8.615850e-47 |
| Msa1035640 | Msa1413190 | 0.812326 | 4.485616e-51 | -8.615850e-47 |
| Msa1070630 | Msa1413190 | 0.802917 | 4.467355e-49 | -8.615850e-47 |
| Msa1093190 | Msa1413190 | 0.810217 | 1.286266e-50 | -8.615850e-47 |
| Msa0266140 | Msa1413190 | 0.800352 | 1.500416e-48 | -8.615850e-47 |
| Msa0304060 | Msa1413190 | 0.815231 | 1.027611e-51 | -8.615850e-47 |
| Msa0313870 | Msa1413190 | 0.821971 | 3.040363e-53 | -8.615850e-47 |
| Msa0344610 | Msa1413190 | 0.810184 | 1.307580e-50 | -8.615850e-47 |
| Msa0358470 | Msa1413190 | -0.800996 | 1.108996e-48 | -8.615850e-47 |
| Msa1205270 | Msa1413190 | 0.824672 | 7.108894e-54 | -8.615850e-47 |
| Msa0487890 | Msa1413190 | 0.806877 | 6.646476e-50 | -8.615850e-47 |
| Msa0538050 | Msa1413190 | 0.830069 | 3.613932e-55 | -8.615850e-47 |
| Msa0547340 | Msa1413190 | -0.805057 | 1.603853e-49 | -8.615850e-47 |
| Msa0561420 | Msa1413190 | 0.800312 | 1.529034e-48 | -8.615850e-47 |
| Msa0566930 | Msa1413190 | -0.823338 | 1.461938e-53 | -8.615850e-47 |
| Msa0580210 | Msa1413190 | -0.814366 | 1.597979e-51 | -8.615850e-47 |
| Msa0585720 | Msa1413190 | 0.803761 | 2.986906e-49 | -8.615850e-47 |
| Msa0602070 | Msa1413190 | -0.800283 | 1.550206e-48 | -8.615850e-47 |
| Msa0861400 | Msa1413190 | 0.804048 | 2.604684e-49 | -8.615850e-47 |
| Msa0967900 | Msa1413190 | 0.855295 | 6.943737e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413190 | MtrunA17_Chr2g0283771 | 97.039 | 439 | 12 | 1 | 1 | 438 | 1 | 439 | 0.0 | 880 |
| Msa1413190 | MtrunA17_Chr8g0379001 | 72.889 | 450 | 107 | 7 | 3 | 438 | 2 | 450 | 0.0 | 646 |
| Msa1413190 | MtrunA17_Chr4g0072801 | 44.476 | 353 | 173 | 5 | 82 | 426 | 72 | 409 | 5.13e-92 | 284 |
| Msa1413190 | MtrunA17_Chr0c06g0493481 | 43.370 | 362 | 170 | 8 | 79 | 426 | 76 | 416 | 1.80e-90 | 280 |
| Msa1413190 | MtrunA17_Chr3g0140681 | 42.210 | 353 | 190 | 6 | 79 | 427 | 56 | 398 | 1.52e-88 | 275 |
| Msa1413190 | MtrunA17_Chr1g0170451 | 44.444 | 342 | 169 | 5 | 83 | 424 | 30 | 350 | 3.29e-88 | 272 |
| Msa1413190 | MtrunA17_Chr7g0214251 | 50.575 | 87 | 40 | 2 | 149 | 232 | 40 | 126 | 1.32e-18 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413190 | AT1G29120.1 | 67.424 | 396 | 120 | 4 | 47 | 438 | 64 | 454 | 0.0 | 520 |
| Msa1413190 | AT1G29120.8 | 67.085 | 398 | 122 | 4 | 45 | 438 | 63 | 455 | 0.0 | 520 |
| Msa1413190 | AT1G29120.2 | 67.424 | 396 | 120 | 4 | 47 | 438 | 64 | 454 | 0.0 | 520 |
| Msa1413190 | AT1G29120.5 | 67.003 | 397 | 121 | 5 | 47 | 438 | 64 | 455 | 2.18e-180 | 511 |
| Msa1413190 | AT1G29120.7 | 68.378 | 370 | 108 | 4 | 47 | 412 | 64 | 428 | 2.44e-170 | 485 |
| Msa1413190 | AT1G29120.4 | 68.182 | 330 | 96 | 4 | 47 | 372 | 64 | 388 | 2.20e-147 | 425 |
| Msa1413190 | AT1G29120.3 | 68.182 | 330 | 96 | 4 | 47 | 372 | 64 | 388 | 2.70e-147 | 425 |
| Msa1413190 | AT1G29120.6 | 66.023 | 259 | 82 | 3 | 47 | 304 | 64 | 317 | 6.65e-113 | 335 |
| Msa1413190 | AT4G25770.1 | 47.674 | 344 | 159 | 4 | 82 | 424 | 91 | 414 | 1.19e-96 | 296 |
| Msa1413190 | AT4G25770.2 | 47.385 | 325 | 150 | 4 | 82 | 405 | 91 | 395 | 7.38e-89 | 276 |
| Msa1413190 | AT5G51180.2 | 42.690 | 342 | 174 | 5 | 83 | 424 | 34 | 353 | 1.10e-87 | 271 |
| Msa1413190 | AT5G51180.1 | 42.690 | 342 | 174 | 5 | 83 | 424 | 34 | 353 | 1.10e-87 | 271 |
| Msa1413190 | AT1G10040.1 | 42.090 | 354 | 180 | 6 | 79 | 426 | 76 | 410 | 2.13e-85 | 267 |
| Msa1413190 | AT1G10040.2 | 42.342 | 333 | 167 | 6 | 79 | 405 | 76 | 389 | 2.55e-78 | 249 |
Find 161 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGTAGCTCCATTGTTTAT+TGG | 0.190651 | tig0024012:-70347 | Msa1413190:CDS |
| CCTGAAGCGAATATCCTTTC+TGG | 0.194294 | tig0024012:-71132 | Msa1413190:CDS |
| TGTAGAATTTCATGAAATTA+TGG | 0.246342 | tig0024012:-69280 | Msa1413190:CDS |
| GCTTACACTAAGACATTTAC+TGG | 0.264384 | tig0024012:-71317 | Msa1413190:CDS |
| ACACGTAGGAAAATTGAATA+AGG | 0.270828 | tig0024012:-68794 | Msa1413190:three_prime_UTR |
| TAAGTAAGTGTGAAATTTCT+TGG | 0.281576 | tig0024012:+74023 | None:intergenic |
| CCACATTCGTAAACCTTTAC+TGG | 0.281747 | tig0024012:-68822 | Msa1413190:three_prime_UTR |
| TACAATTATTTGGAAAGTTC+TGG | 0.286429 | tig0024012:-73975 | Msa1413190:five_prime_UTR |
| CTACAACGCGCGTAAATAAA+AGG | 0.296569 | tig0024012:+73925 | None:intergenic |
| GCAGTACATGGATGTTACTA+TGG | 0.298616 | tig0024012:+69053 | None:intergenic |
| TTGTTCTTGTCCATGGTATC+TGG | 0.304231 | tig0024012:-72510 | Msa1413190:CDS |
| AAGTTCGATTTCCCTCCTTA+TGG | 0.311023 | tig0024012:+69985 | None:intergenic |
| TGAATTTACACAGAAAATAA+TGG | 0.312150 | tig0024012:+68633 | None:intergenic |
| TCCTTTCTGGCCCATTCTCT+TGG | 0.333297 | tig0024012:-71119 | Msa1413190:CDS |
| TGAGGTCCATCGGAAGGAAT+TGG | 0.338684 | tig0024012:+69357 | None:intergenic |
| GTTCTGGTTCCTTTGCTATA+TGG | 0.340792 | tig0024012:-73959 | Msa1413190:exon |
| ACAGCCTCCACGCCAATCTT+TGG | 0.344306 | tig0024012:-69418 | Msa1413190:intron |
| AGAAGAGTGTAAGGTATCTT+TGG | 0.350757 | tig0024012:-68715 | Msa1413190:three_prime_UTR |
| GAGGTCCATCGGAAGGAATT+GGG | 0.357643 | tig0024012:+69358 | None:intergenic |
| ATCAGGTTGGCCACTATTAT+AGG | 0.360766 | tig0024012:+71049 | None:intergenic |
| TCCTTTGCTTTCACTGCCTC+CGG | 0.369392 | tig0024012:+69327 | None:intergenic |
| TACTCATAGCTTCAGCTCTA+AGG | 0.378413 | tig0024012:+72599 | None:intergenic |
| TCAACTTTCACTCAGCAGTT+TGG | 0.384156 | tig0024012:-69087 | Msa1413190:CDS |
| CAAAAGAAGGGATGGTTTGT+TGG | 0.385209 | tig0024012:+70286 | None:intergenic |
| CCAACGCGGCCAATCTTTGT+TGG | 0.393315 | tig0024012:+68453 | None:intergenic |
| GGTGGAGGAAGAAGAGCAAC+AGG | 0.395750 | tig0024012:+73852 | None:intergenic |
| TGGCCACTATTATAGGTATC+AGG | 0.400578 | tig0024012:+71056 | None:intergenic |
| GGTGGCCATCCCAGCTCATC+TGG | 0.402780 | tig0024012:-74141 | Msa1413190:five_prime_UTR |
| CAATTGCATATCTAGCAAAT+AGG | 0.405550 | tig0024012:+71093 | None:intergenic |
| GCTAAAGTAATAAAATTCAT+TGG | 0.408625 | tig0024012:+70957 | None:intergenic |
| AAACCAAGAGGCATCGTTAC+GGG | 0.412999 | tig0024012:-68396 | Msa1413190:three_prime_UTR |
| TCGCAGTTTGCTGGATCATC+AGG | 0.414201 | tig0024012:+71032 | None:intergenic |
| TTTAACAGAGGAGATGATAC+AGG | 0.415436 | tig0024012:-69143 | Msa1413190:intron |
| ATGGCCACCGCCTACCAATC+AGG | 0.416351 | tig0024012:+74155 | None:intergenic |
| CATCTCCTTGTTCTTGTCCA+TGG | 0.421595 | tig0024012:-72517 | Msa1413190:CDS |
| TCCGCATAACTCCAGTCACC+TGG | 0.422658 | tig0024012:+71882 | None:intergenic |
| CGCGGCCAATCTTTGTTGGA+TGG | 0.423379 | tig0024012:+68457 | None:intergenic |
| GATACAGGGATTACAAAGAT+TGG | 0.424431 | tig0024012:-69128 | Msa1413190:CDS |
| TTTCTGGCCCATTCTCTTGG+AGG | 0.425581 | tig0024012:-71116 | Msa1413190:CDS |
| ACTCCGCATCTTGGCGTAAG+AGG | 0.426849 | tig0024012:-70933 | Msa1413190:CDS |
| TTGTCCATGGTATCTGGTCT+AGG | 0.430182 | tig0024012:-72504 | Msa1413190:intron |
| AAAAGAAGGGATGGTTTGTT+GGG | 0.430748 | tig0024012:+70287 | None:intergenic |
| ATCGGAACACCGAACAGAAA+TGG | 0.430885 | tig0024012:+70389 | None:intergenic |
| AAGAGGGATGATTGCTGGAC+TGG | 0.433128 | tig0024012:-70982 | Msa1413190:CDS |
| GAATTTACACAGAAAATAAT+GGG | 0.434251 | tig0024012:+68634 | None:intergenic |
| TAAATGTTGTGATAAGAAAC+AGG | 0.435922 | tig0024012:-68846 | Msa1413190:three_prime_UTR |
| ACAACATTTATTTATGATGT+TGG | 0.437266 | tig0024012:+68859 | None:intergenic |
| GTTTGTATTGATGTATCAAA+TGG | 0.437523 | tig0024012:+68582 | None:intergenic |
| CAATTGTGAGCCAGATGAGC+TGG | 0.442144 | tig0024012:+74131 | None:intergenic |
| CCAGAAAGGATATTCGCTTC+AGG | 0.442879 | tig0024012:+71132 | None:intergenic |
| ACAAGAACAAGGAGATGATC+AGG | 0.445282 | tig0024012:+72523 | None:intergenic |
| ACTGATACAGCCCAGGTGAC+TGG | 0.446874 | tig0024012:-71893 | Msa1413190:intron |
| TTAATAGAATCTCTGGACTA+AGG | 0.447403 | tig0024012:+68481 | None:intergenic |
| GTTACGGGCACAAGATCATT+TGG | 0.449814 | tig0024012:-68381 | Msa1413190:three_prime_UTR |
| GAAAATGAAGCTAGGGGTGG+AGG | 0.449942 | tig0024012:+73837 | None:intergenic |
| TGGAGGAAGAAGAGCAACAG+GGG | 0.449972 | tig0024012:+73854 | None:intergenic |
| AAGTAAGTGTGAAATTTCTT+GGG | 0.452608 | tig0024012:+74024 | None:intergenic |
| AGAACGTGTTTCTCAAACTA+GGG | 0.453072 | tig0024012:-68665 | Msa1413190:three_prime_UTR |
| CAGAAGCCATTCTCAAAAGA+AGG | 0.453668 | tig0024012:+70273 | None:intergenic |
| CAAATAGGCCTCCAAGAGAA+TGG | 0.458924 | tig0024012:+71108 | None:intergenic |
| TCAAAGCTTCCATTTCTGTT+CGG | 0.459099 | tig0024012:-70398 | Msa1413190:intron |
| AGTGTCAGGAGAAGAGTGTA+AGG | 0.460987 | tig0024012:-68724 | Msa1413190:three_prime_UTR |
| CGATGGACCTCAATTTCCTC+CGG | 0.468852 | tig0024012:-69346 | Msa1413190:CDS |
| CTACGTGTATAGACCAGTAA+AGG | 0.472537 | tig0024012:+68809 | None:intergenic |
| GGATGGCTTAATAGAATCTC+TGG | 0.472863 | tig0024012:+68474 | None:intergenic |
| TTTGTATTGATGTATCAAAT+GGG | 0.473174 | tig0024012:+68583 | None:intergenic |
| TAACCTATATAGATATGGTT+GGG | 0.474158 | tig0024012:-70021 | Msa1413190:intron |
| CACGTAGGAAAATTGAATAA+GGG | 0.476312 | tig0024012:-68793 | Msa1413190:three_prime_UTR |
| GTGCCCGTAACGATGCCTCT+TGG | 0.477328 | tig0024012:+68393 | None:intergenic |
| GCTTGTATCCATCCAAAGAT+TGG | 0.478195 | tig0024012:+69406 | None:intergenic |
| ATGGCTTCTGACTGTGAAGA+TGG | 0.478288 | tig0024012:-70260 | Msa1413190:CDS |
| TTAAGCCATCCAACAAAGAT+TGG | 0.479936 | tig0024012:-68462 | Msa1413190:three_prime_UTR |
| TGTTGGGTTTATCATCAGTA+AGG | 0.480234 | tig0024012:+70303 | None:intergenic |
| ATCTGATAGTATATAGTGTC+AGG | 0.481869 | tig0024012:-68738 | Msa1413190:three_prime_UTR |
| TCACCTGATACCTATAATAG+TGG | 0.482484 | tig0024012:-71059 | Msa1413190:CDS |
| AGGTGAGTGAAAATGAAGCT+AGG | 0.483864 | tig0024012:+73829 | None:intergenic |
| AAATTATGAAATCTAGCAAA+TGG | 0.485991 | tig0024012:-68506 | Msa1413190:three_prime_UTR |
| ACTTTAGCAACTCCGCATCT+TGG | 0.486963 | tig0024012:-70942 | Msa1413190:CDS |
| CCAATAAACAATGGAGCTAC+AGG | 0.492808 | tig0024012:+70347 | None:intergenic |
| TAGCTCCATTGTTTATTGGT+CGG | 0.497267 | tig0024012:-70343 | Msa1413190:CDS |
| AAGAAATGGCTTCACAATGC+TGG | 0.502561 | tig0024012:-68943 | Msa1413190:CDS |
| AAAACCAAGAGGCATCGTTA+CGG | 0.503479 | tig0024012:-68397 | Msa1413190:three_prime_UTR |
| ATAAGGAGGGAAATCGAACT+TGG | 0.506230 | tig0024012:-69983 | Msa1413190:CDS |
| ATACAGGGATTACAAAGATT+GGG | 0.509448 | tig0024012:-69127 | Msa1413190:CDS |
| AAGTCTCCTGCTAAAACCAC+TGG | 0.510527 | tig0024012:-72562 | Msa1413190:CDS |
| TTTACTGGGATTGATGAAGC+TGG | 0.513591 | tig0024012:-71302 | Msa1413190:CDS |
| CCAGTAAAGGTTTACGAATG+TGG | 0.514517 | tig0024012:+68822 | None:intergenic |
| ACTGCCTCCGGAGGAAATTG+AGG | 0.515275 | tig0024012:+69339 | None:intergenic |
| AAATAGGCCTCCAAGAGAAT+GGG | 0.520903 | tig0024012:+71109 | None:intergenic |
| CCAACAAAGATTGGCCGCGT+TGG | 0.521788 | tig0024012:-68453 | Msa1413190:three_prime_UTR |
| TTAACCTATATAGATATGGT+TGG | 0.524781 | tig0024012:-70022 | Msa1413190:intron |
| TCCAAGAGAATGGGCCAGAA+AGG | 0.524839 | tig0024012:+71118 | None:intergenic |
| AGCTATGAGTACTACCACTC+AGG | 0.525136 | tig0024012:-72587 | Msa1413190:CDS |
| TAATAGAATCTCTGGACTAA+GGG | 0.526979 | tig0024012:+68482 | None:intergenic |
| CCATTGTTTATTGGTCGGAC+TGG | 0.527917 | tig0024012:-70338 | Msa1413190:CDS |
| TTATGATGTTGGTAAAATTG+AGG | 0.528337 | tig0024012:+68870 | None:intergenic |
| GGAGGAAGAAGAGCAACAGG+GGG | 0.529934 | tig0024012:+73855 | None:intergenic |
| GGTGGCGCACGTCCTCCATA+AGG | 0.530656 | tig0024012:-70000 | Msa1413190:CDS |
| AGGAAAATTGAATAAGGGAA+AGG | 0.533832 | tig0024012:-68788 | Msa1413190:three_prime_UTR |
| AAGGATATTCGCTTCAGGCT+CGG | 0.535585 | tig0024012:+71137 | None:intergenic |
| ATTAGGTGTCGTGACCTGAT+TGG | 0.537221 | tig0024012:-74169 | None:intergenic |
| GCCATTCTCAAAAGAAGGGA+TGG | 0.545625 | tig0024012:+70278 | None:intergenic |
| GGTGAGTGAAAATGAAGCTA+GGG | 0.547244 | tig0024012:+73830 | None:intergenic |
| AGGTCCATCGGAAGGAATTG+GGG | 0.548499 | tig0024012:+69359 | None:intergenic |
| TGTTATGACACAACAACCGC+TGG | 0.549188 | tig0024012:-74065 | Msa1413190:five_prime_UTR |
| TTCCCTCTTACGCCAAGATG+CGG | 0.550452 | tig0024012:+70930 | None:intergenic |
| TTTGCTTTCACTGCCTCCGG+AGG | 0.552823 | tig0024012:+69330 | None:intergenic |
| GAGAACGTGTTTCTCAAACT+AGG | 0.555847 | tig0024012:-68666 | Msa1413190:three_prime_UTR |
| CTCCGCATCTTGGCGTAAGA+GGG | 0.558128 | tig0024012:-70932 | Msa1413190:CDS |
| GAGGGAAATCGAACTTGGTA+AGG | 0.559034 | tig0024012:-69978 | Msa1413190:intron |
| TGGCTTCACAATGCTGGTGT+AGG | 0.563718 | tig0024012:-68937 | Msa1413190:CDS |
| CGGAGGAAATTGAGGTCCAT+CGG | 0.564835 | tig0024012:+69347 | None:intergenic |
| GGCGCACGTCCTCCATAAGG+AGG | 0.571549 | tig0024012:-69997 | Msa1413190:CDS |
| TTCGATTTCCCTCCTTATGG+AGG | 0.572163 | tig0024012:+69988 | None:intergenic |
| CAGTACATGGATGTTACTAT+GGG | 0.572825 | tig0024012:+69054 | None:intergenic |
| CTTACACTAAGACATTTACT+GGG | 0.574022 | tig0024012:-71316 | Msa1413190:CDS |
| GTGGAGGAAGAAGAGCAACA+GGG | 0.577058 | tig0024012:+73853 | None:intergenic |
| CAGTAAAGGTTTACGAATGT+GGG | 0.583435 | tig0024012:+68823 | None:intergenic |
| GTGAGCCAGATGAGCTGGGA+TGG | 0.589418 | tig0024012:+74136 | None:intergenic |
| CCTCCACGCCAATCTTTGGA+TGG | 0.594116 | tig0024012:-69414 | Msa1413190:CDS |
| AAAATAGGGAATTACCAGAA+AGG | 0.595675 | tig0024012:+73809 | None:intergenic |
| AGTTTGCTGGATCATCAGGT+TGG | 0.596532 | tig0024012:+71036 | None:intergenic |
| TGATCCAGCAAACTGCGAGA+TGG | 0.597740 | tig0024012:-71027 | Msa1413190:CDS |
| AGAAGCCATTCTCAAAAGAA+GGG | 0.599139 | tig0024012:+70274 | None:intergenic |
| GAATTTCATGAAATTATGGA+AGG | 0.599293 | tig0024012:-69276 | Msa1413190:intron |
| GGTGTCGTGACCTGATTGGT+AGG | 0.603721 | tig0024012:-74165 | None:intergenic |
| CCATCCAAAGATTGGCGTGG+AGG | 0.605389 | tig0024012:+69414 | None:intergenic |
| GCTATGAGTACTACCACTCA+GGG | 0.606664 | tig0024012:-72586 | Msa1413190:CDS |
| GACTCAACAGCAGCAACTTG+TGG | 0.607470 | tig0024012:+68428 | None:intergenic |
| AGCAGGAGACTTTCCCTGAG+TGG | 0.608321 | tig0024012:+72573 | None:intergenic |
| GTGACCTGATTGGTAGGCGG+TGG | 0.609899 | tig0024012:-74159 | Msa1413190:five_prime_UTR |
| AGGGATTACAAAGATTGGGA+TGG | 0.615998 | tig0024012:-69123 | Msa1413190:CDS |
| CCGCATAACTCCAGTCACCT+GGG | 0.616017 | tig0024012:+71883 | None:intergenic |
| GGAAATTGAGGTCCATCGGA+AGG | 0.616513 | tig0024012:+69351 | None:intergenic |
| AGTGAAAATGAAGCTAGGGG+TGG | 0.618416 | tig0024012:+73834 | None:intergenic |
| TTAACAGAGGAGATGATACA+GGG | 0.625473 | tig0024012:-69142 | Msa1413190:intron |
| AATTGTGAGCCAGATGAGCT+GGG | 0.632582 | tig0024012:+74132 | None:intergenic |
| AGATACCATGGACAAGAACA+AGG | 0.635264 | tig0024012:+72512 | None:intergenic |
| CCTATATAGATATGGTTGGG+TGG | 0.635344 | tig0024012:-70018 | Msa1413190:intron |
| ACTTCTGCAGGTGCAAACAA+AGG | 0.635660 | tig0024012:-72637 | Msa1413190:intron |
| TATCCATCCAAAGATTGGCG+TGG | 0.638279 | tig0024012:+69411 | None:intergenic |
| ATGCTGCTGCCATATAGCAA+AGG | 0.640400 | tig0024012:+73950 | None:intergenic |
| TGGACCTCAATTTCCTCCGG+AGG | 0.641292 | tig0024012:-69343 | Msa1413190:CDS |
| ATTACCTAGACCAGATACCA+TGG | 0.645160 | tig0024012:+72500 | None:intergenic |
| AGTCTCCTGCTAAAACCACT+GGG | 0.648790 | tig0024012:-72561 | Msa1413190:CDS |
| ATCATTCTTCAGATTCCCAG+TGG | 0.649086 | tig0024012:+72546 | None:intergenic |
| GAACGTGTTTCTCAAACTAG+GGG | 0.649295 | tig0024012:-68664 | Msa1413190:three_prime_UTR |
| CCCAGGTGACTGGAGTTATG+CGG | 0.649781 | tig0024012:-71883 | Msa1413190:CDS |
| TCCGGAGGCAGTGAAAGCAA+AGG | 0.653002 | tig0024012:-69328 | Msa1413190:CDS |
| CCAGTCCGACCAATAAACAA+TGG | 0.653339 | tig0024012:+70338 | None:intergenic |
| TTGTATTGATGTATCAAATG+GGG | 0.657146 | tig0024012:+68584 | None:intergenic |
| GCGCACGTCCTCCATAAGGA+GGG | 0.668252 | tig0024012:-69996 | Msa1413190:CDS |
| ATGTTACTATGGGCAAAGAG+AGG | 0.669169 | tig0024012:+69064 | None:intergenic |
| CAAATTGTGACAAGTTCCAG+CGG | 0.669267 | tig0024012:+74049 | None:intergenic |
| GGTCCATCGGAAGGAATTGG+GGG | 0.676997 | tig0024012:+69360 | None:intergenic |
| AGGTGACTGGAGTTATGCGG+AGG | 0.678765 | tig0024012:-71880 | Msa1413190:CDS |
| GTGAGTGAAAATGAAGCTAG+GGG | 0.707096 | tig0024012:+73831 | None:intergenic |
| AGCAACTTGTGGTTCCAACG+CGG | 0.713596 | tig0024012:+68439 | None:intergenic |
| CTTTACTGGTCTATACACGT+AGG | 0.714453 | tig0024012:-68808 | Msa1413190:three_prime_UTR |
| AACGTGTTTCTCAAACTAGG+GGG | 0.716656 | tig0024012:-68663 | Msa1413190:three_prime_UTR |
| GTCGTGACCTGATTGGTAGG+CGG | 0.716999 | tig0024012:-74162 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGAAAAAGAATAAAATA+GGG | + | tig0024012:68728-68747 | None:intergenic | 10.0% |
| !! | AAATTGAAAAAGAATAAAAT+AGG | + | tig0024012:68729-68748 | None:intergenic | 10.0% |
| !!! | TTTTATTCTTTTTCAATTTT+AGG | - | tig0024012:68730-68749 | Msa1413190:three_prime_UTR | 10.0% |
| !!! | ATCATATATTAATATTTCTA+TGG | + | tig0024012:69847-69866 | None:intergenic | 10.0% |
| !!! | TTAATATATGATTTTAATGT+TGG | - | tig0024012:69855-69874 | Msa1413190:intron | 10.0% |
| !! | AATTAAAGATTAATTTAACA+TGG | + | tig0024012:71129-71148 | None:intergenic | 10.0% |
| !! | CAAAAATAGATACAATTATT+TGG | - | tig0024012:68535-68554 | Msa1413190:three_prime_UTR | 15.0% |
| !! | TAAAGAAAACAAGAAAAAAA+AGG | + | tig0024012:70758-70777 | None:intergenic | 15.0% |
| !!! | AAGAAATTTTTTGAAAATCT+TGG | - | tig0024012:70902-70921 | Msa1413190:intron | 15.0% |
| !!! | AGAAATTTTTTGAAAATCTT+GGG | - | tig0024012:70903-70922 | Msa1413190:intron | 15.0% |
| !!! | AGAAATCAAATTCATTTTTA+AGG | + | tig0024012:71165-71184 | None:intergenic | 15.0% |
| !! | GAACTATATAAAAATTCTAA+AGG | + | tig0024012:72051-72070 | None:intergenic | 15.0% |
| !!! | AGAATTTTTATATAGTTCAA+TGG | - | tig0024012:72053-72072 | Msa1413190:intron | 15.0% |
| !!! | GAATTTTTATATAGTTCAAT+GGG | - | tig0024012:72054-72073 | Msa1413190:intron | 15.0% |
| !! | AATACAAATTTCATAATCAT+AGG | + | tig0024012:72687-72706 | None:intergenic | 15.0% |
| !! | TGAAAACAAAAATGAAATAA+AGG | + | tig0024012:73991-74010 | None:intergenic | 15.0% |
| !!! | GTTTAACTTGTTCTATAATT+CGG | - | tig0024012:68792-68811 | Msa1413190:three_prime_UTR | 20.0% |
| !! | AATCATCATAAATTTAGACA+TGG | + | tig0024012:69042-69061 | None:intergenic | 20.0% |
| !!! | TGTAGTAATTTGTATTGATT+AGG | - | tig0024012:69218-69237 | Msa1413190:intron | 20.0% |
| !! | GAATTCAGAATTATTCAATT+AGG | - | tig0024012:69307-69326 | Msa1413190:CDS | 20.0% |
| !!! | TCTTTTGTTTCTCTTTAATT+CGG | - | tig0024012:69444-69463 | Msa1413190:intron | 20.0% |
| !!! | AAGTTTTCACTGATTATTTA+AGG | + | tig0024012:70396-70415 | None:intergenic | 20.0% |
| !! | TATTGAACCATAAGTAAAAA+AGG | + | tig0024012:70714-70733 | None:intergenic | 20.0% |
| !! | TTCAAAAAATTTCTTCTGTT+GGG | + | tig0024012:70897-70916 | None:intergenic | 20.0% |
| !! | TTTCAAAAAATTTCTTCTGT+TGG | + | tig0024012:70898-70917 | None:intergenic | 20.0% |
| !! | GCTAAAGTAATAAAATTCAT+TGG | + | tig0024012:71566-71585 | None:intergenic | 20.0% |
| !! | TAAAGGAATAACACAAATTA+AGG | + | tig0024012:72481-72500 | None:intergenic | 20.0% |
| !! | AAAATTAATGCATTATAGTC+AGG | + | tig0024012:72783-72802 | None:intergenic | 20.0% |
| !!! | AATATTTGAAACATAGGATA+TGG | + | tig0024012:72929-72948 | None:intergenic | 20.0% |
| !! | TGTAGAATTTCATGAAATTA+TGG | - | tig0024012:73240-73259 | Msa1413190:intron | 20.0% |
| !! | ACAACATTTATTTATGATGT+TGG | + | tig0024012:73664-73683 | None:intergenic | 20.0% |
| !! | GAATTTACACAGAAAATAAT+GGG | + | tig0024012:73889-73908 | None:intergenic | 20.0% |
| !! | TGAATTTACACAGAAAATAA+TGG | + | tig0024012:73890-73909 | None:intergenic | 20.0% |
| !!! | TTTGTATTGATGTATCAAAT+GGG | + | tig0024012:73940-73959 | None:intergenic | 20.0% |
| !! | ACAAAAATGAAATAAAGGAA+TGG | + | tig0024012:73986-74005 | None:intergenic | 20.0% |
| !! | AAATTATGAAATCTAGCAAA+TGG | - | tig0024012:74014-74033 | Msa1413190:five_prime_UTR | 20.0% |
| ! | AAGTAAGTGTGAAATTTCTT+GGG | + | tig0024012:68499-68518 | None:intergenic | 25.0% |
| ! | TAAGTAAGTGTGAAATTTCT+TGG | + | tig0024012:68500-68519 | None:intergenic | 25.0% |
| ! | TACAATTATTTGGAAAGTTC+TGG | - | tig0024012:68545-68564 | Msa1413190:three_prime_UTR | 25.0% |
| ! | TGAGAAAAAGAAGTAATTAG+TGG | + | tig0024012:68628-68647 | None:intergenic | 25.0% |
| ! | AGTTAAACAACAATAAATGC+AGG | + | tig0024012:68780-68799 | None:intergenic | 25.0% |
| !! | TCTATAATTCGGTTAATTTG+TGG | - | tig0024012:68803-68822 | Msa1413190:three_prime_UTR | 25.0% |
| !!! | CTATAATTCGGTTAATTTGT+GGG | - | tig0024012:68804-68823 | Msa1413190:three_prime_UTR | 25.0% |
| !!! | TATAATTCGGTTAATTTGTG+GGG | - | tig0024012:68805-68824 | Msa1413190:three_prime_UTR | 25.0% |
| ! | GACAAAGAATTATTTCATTC+AGG | + | tig0024012:68901-68920 | None:intergenic | 25.0% |
| ! | CAATGATTTGAATTCAATTG+CGG | - | tig0024012:69004-69023 | Msa1413190:intron | 25.0% |
| !!! | TAATTTGTATTGATTAGGAG+CGG | - | tig0024012:69223-69242 | Msa1413190:intron | 25.0% |
| ! | GTCCTATTTATACAAACTAA+GGG | + | tig0024012:69265-69284 | None:intergenic | 25.0% |
| ! | TTTGTATAAATAGGACCATT+TGG | - | tig0024012:69269-69288 | Msa1413190:intron | 25.0% |
| ! | TATTCAATTAGGAACCTTAT+TGG | - | tig0024012:69318-69337 | Msa1413190:CDS | 25.0% |
| !!! | CTTTTGTTTCTCTTTAATTC+GGG | - | tig0024012:69445-69464 | Msa1413190:intron | 25.0% |
| !! | CCATTTTCTCAAATTATCAT+AGG | + | tig0024012:69514-69533 | None:intergenic | 25.0% |
| ! | CCTATGATAATTTGAGAAAA+TGG | - | tig0024012:69511-69530 | Msa1413190:intron | 25.0% |
| ! | AACTTCATGTCTAAAAAAAC+AGG | - | tig0024012:69720-69739 | Msa1413190:intron | 25.0% |
| ! | ACTTCATGTCTAAAAAAACA+GGG | - | tig0024012:69721-69740 | Msa1413190:intron | 25.0% |
| ! | TGATTGCAATTAAAAAGACT+AGG | + | tig0024012:70323-70342 | None:intergenic | 25.0% |
| ! | AACAAGTTAAAACATCCAAT+TGG | + | tig0024012:70604-70623 | None:intergenic | 25.0% |
| ! | AAGAGTTAAAAATGAACCTT+GGG | - | tig0024012:70663-70682 | Msa1413190:intron | 25.0% |
| ! | AGAAAACAAGAAAAAAAAGG+TGG | + | tig0024012:70755-70774 | None:intergenic | 25.0% |
| ! | AAATGCTTAAAACTCATTGA+AGG | - | tig0024012:70822-70841 | Msa1413190:intron | 25.0% |
| ! | TCAAAAAATTTCTTCTGTTG+GGG | + | tig0024012:70896-70915 | None:intergenic | 25.0% |
| ! | TCAACATATACAACTAACTA+GGG | + | tig0024012:71073-71092 | None:intergenic | 25.0% |
| !! | ATATTTCCTTTTATCACAAC+AGG | - | tig0024012:71337-71356 | Msa1413190:intron | 25.0% |
| ! | TGTTCAGAACAATCAAATTA+TGG | - | tig0024012:71623-71642 | Msa1413190:intron | 25.0% |
| !!! | AGCTTTTATTTTGACACATA+TGG | - | tig0024012:71646-71665 | Msa1413190:intron | 25.0% |
| ! | ATATACTTCTTTCTCTTAAC+TGG | - | tig0024012:71914-71933 | Msa1413190:intron | 25.0% |
| ! | AAACTTGAATGATTAAGCAA+TGG | + | tig0024012:71972-71991 | None:intergenic | 25.0% |
| ! | TGGAAAATTCATGTATGTAA+TGG | - | tig0024012:72280-72299 | Msa1413190:intron | 25.0% |
| !!! | TGATTGTTTTACTGAAACAA+AGG | + | tig0024012:72331-72350 | None:intergenic | 25.0% |
| ! | TCCTTTAACCTATATAGATA+TGG | - | tig0024012:72494-72513 | Msa1413190:intron | 25.0% |
| ! | ACCATATCTATATAGGTTAA+AGG | + | tig0024012:72498-72517 | None:intergenic | 25.0% |
| ! | TTAACCTATATAGATATGGT+TGG | - | tig0024012:72498-72517 | Msa1413190:intron | 25.0% |
| ! | TAACCTATATAGATATGGTT+GGG | - | tig0024012:72499-72518 | Msa1413190:intron | 25.0% |
| !! | GTCTTCTAATTTTGAATCAT+TGG | - | tig0024012:72861-72880 | Msa1413190:intron | 25.0% |
| !! | CTAATTTTGAATCATTGGAA+TGG | - | tig0024012:72866-72885 | Msa1413190:intron | 25.0% |
| ! | AAAATTGTGATATGTTAGCA+GGG | + | tig0024012:72904-72923 | None:intergenic | 25.0% |
| ! | TAAAATTGTGATATGTTAGC+AGG | + | tig0024012:72905-72924 | None:intergenic | 25.0% |
| ! | CTACATGGAATTTATAGTTA+TGG | + | tig0024012:72955-72974 | None:intergenic | 25.0% |
| ! | GAATTTCATGAAATTATGGA+AGG | - | tig0024012:73244-73263 | Msa1413190:intron | 25.0% |
| !!! | TCTTCTATTAGTTTTGGTTA+TGG | + | tig0024012:73276-73295 | None:intergenic | 25.0% |
| !!! | AGAGTATCTTCTATTAGTTT+TGG | + | tig0024012:73282-73301 | None:intergenic | 25.0% |
| !!! | AGATACTCTAGTTTACATTT+TGG | - | tig0024012:73293-73312 | Msa1413190:intron | 25.0% |
| !!! | GATACTCTAGTTTACATTTT+GGG | - | tig0024012:73294-73313 | Msa1413190:intron | 25.0% |
| ! | TTTATAACATGAGTATTCCT+TGG | - | tig0024012:73541-73560 | Msa1413190:intron | 25.0% |
| !! | TTATGATGTTGGTAAAATTG+AGG | + | tig0024012:73653-73672 | None:intergenic | 25.0% |
| ! | TAAATGTTGTGATAAGAAAC+AGG | - | tig0024012:73674-73693 | Msa1413190:intron | 25.0% |
| !! | TTGTATTGATGTATCAAATG+GGG | + | tig0024012:73939-73958 | None:intergenic | 25.0% |
| !! | GTTTGTATTGATGTATCAAA+TGG | + | tig0024012:73941-73960 | None:intergenic | 25.0% |
| AAAATAGGGAATTACCAGAA+AGG | + | tig0024012:68714-68733 | None:intergenic | 30.0% | |
| ACCAAGTAATTGAGTTCAAT+CGG | - | tig0024012:68860-68879 | Msa1413190:exon | 30.0% | |
| TATGAAGCACATACATTGTT+AGG | - | tig0024012:69068-69087 | Msa1413190:CDS | 30.0% | |
| !! | TGCCCTTAGTTTGTATAAAT+AGG | - | tig0024012:69260-69279 | Msa1413190:intron | 30.0% |
| GGTCCTATTTATACAAACTA+AGG | + | tig0024012:69266-69285 | None:intergenic | 30.0% | |
| GAGTTAAAAGATAGTCTGAA+CGG | - | tig0024012:70075-70094 | Msa1413190:intron | 30.0% | |
| AAGAAAAACCAACAAGCTTA+AGG | - | tig0024012:70106-70125 | Msa1413190:intron | 30.0% | |
| CATAAAAACCTTAAGCTTGT+TGG | + | tig0024012:70117-70136 | None:intergenic | 30.0% | |
| TAACCAACATTGTTTCACAA+TGG | + | tig0024012:70167-70186 | None:intergenic | 30.0% | |
| CAATTAAAAAGACTAGGACA+GGG | + | tig0024012:70317-70336 | None:intergenic | 30.0% | |
| !! | AGGTTTTAGTGCAAGATATA+TGG | + | tig0024012:70433-70452 | None:intergenic | 30.0% |
| ATATATCTTGCACTAAAACC+TGG | - | tig0024012:70432-70451 | Msa1413190:intron | 30.0% | |
| TGCACAATATCTCTAGTAAT+TGG | - | tig0024012:70486-70505 | Msa1413190:intron | 30.0% | |
| TATCTCTAGTAATTGGATGT+TGG | - | tig0024012:70493-70512 | Msa1413190:intron | 30.0% | |
| GAAGAGTTAAAAATGAACCT+TGG | - | tig0024012:70662-70681 | Msa1413190:intron | 30.0% | |
| ! | GAATTAAAAAGCTTTTCCCA+AGG | + | tig0024012:70682-70701 | None:intergenic | 30.0% |
| !! | GGGAAAAGCTTTTTAATTCA+TGG | - | tig0024012:70683-70702 | Msa1413190:intron | 30.0% |
| !!! | GGTAACTCCTTTTTTACTTA+TGG | - | tig0024012:70704-70723 | Msa1413190:intron | 30.0% |
| GGTGGTAGAAACAAAATAAA+TGG | + | tig0024012:70737-70756 | None:intergenic | 30.0% | |
| TTAAAACTCATTGAAGGTAG+TGG | - | tig0024012:70828-70847 | Msa1413190:intron | 30.0% | |
| AATTTCACAGAAAACAAGCA+TGG | + | tig0024012:71008-71027 | None:intergenic | 30.0% | |
| CTCAACATATACAACTAACT+AGG | + | tig0024012:71074-71093 | None:intergenic | 30.0% | |
| CTTACACTAAGACATTTACT+GGG | - | tig0024012:71204-71223 | Msa1413190:intron | 30.0% | |
| CAATTGCATATCTAGCAAAT+AGG | + | tig0024012:71430-71449 | None:intergenic | 30.0% | |
| ! | TACTGTATGTTTTATGCTGA+TGG | - | tig0024012:71713-71732 | Msa1413190:intron | 30.0% |
| TCACAGCTTACATAATGTTT+AGG | - | tig0024012:71737-71756 | Msa1413190:intron | 30.0% | |
| !!! | TCCTACGAATTTTTTCTTAC+TGG | - | tig0024012:71848-71867 | Msa1413190:CDS | 30.0% |
| !!! | CCTACGAATTTTTTCTTACT+GGG | - | tig0024012:71849-71868 | Msa1413190:CDS | 30.0% |
| ! | AATAAGTGTCACTAATACAC+TGG | + | tig0024012:72447-72466 | None:intergenic | 30.0% |
| AGTGTATTAGTGACACTTAT+TGG | - | tig0024012:72446-72465 | Msa1413190:intron | 30.0% | |
| AACACAAATTAAGGAGGAAA+GGG | + | tig0024012:72472-72491 | None:intergenic | 30.0% | |
| TAACACAAATTAAGGAGGAA+AGG | + | tig0024012:72473-72492 | None:intergenic | 30.0% | |
| AGGAATAACACAAATTAAGG+AGG | + | tig0024012:72478-72497 | None:intergenic | 30.0% | |
| ! | TTGTCTCCTTTTTATGTTGA+AGG | - | tig0024012:72591-72610 | Msa1413190:CDS | 30.0% |
| TTGAGACCTTCAACATAAAA+AGG | + | tig0024012:72600-72619 | None:intergenic | 30.0% | |
| ! | AGAAGACTGAAGTGTTAAAT+TGG | + | tig0024012:72848-72867 | None:intergenic | 30.0% |
| ! | TGGTGGAATATTTGAAACAT+AGG | + | tig0024012:72935-72954 | None:intergenic | 30.0% |
| CATGGAATTTATAGTTATGG+TGG | + | tig0024012:72952-72971 | None:intergenic | 30.0% | |
| CATTGAACTACATATCTACA+TGG | + | tig0024012:72970-72989 | None:intergenic | 30.0% | |
| TTGGCTTAAGTTTCAGAAAA+AGG | - | tig0024012:73005-73024 | Msa1413190:intron | 30.0% | |
| ! | ATAAGACAACACAATGGTTT+TGG | + | tig0024012:73337-73356 | None:intergenic | 30.0% |
| TTAGCAATAAGACAACACAA+TGG | + | tig0024012:73343-73362 | None:intergenic | 30.0% | |
| ATACAGGGATTACAAAGATT+GGG | - | tig0024012:73393-73412 | Msa1413190:intron | 30.0% | |
| ! | GATTTCAGGTGAAAAAGAAA+TGG | - | tig0024012:73563-73582 | Msa1413190:intron | 30.0% |
| ACACGTAGGAAAATTGAATA+AGG | - | tig0024012:73726-73745 | Msa1413190:intron | 30.0% | |
| CACGTAGGAAAATTGAATAA+GGG | - | tig0024012:73727-73746 | Msa1413190:intron | 30.0% | |
| AGGAAAATTGAATAAGGGAA+AGG | - | tig0024012:73732-73751 | Msa1413190:intron | 30.0% | |
| ATCTGATAGTATATAGTGTC+AGG | - | tig0024012:73782-73801 | Msa1413190:intron | 30.0% | |
| TAATAGAATCTCTGGACTAA+GGG | + | tig0024012:74041-74060 | None:intergenic | 30.0% | |
| TTAATAGAATCTCTGGACTA+AGG | + | tig0024012:74042-74061 | None:intergenic | 30.0% | |
| ! | TTCATTTTCACTCACCTTTC+TGG | - | tig0024012:68697-68716 | Msa1413190:three_prime_UTR | 35.0% |
| ! | AATGCAGGAGTTTAGAACAA+GGG | + | tig0024012:68765-68784 | None:intergenic | 35.0% |
| ! | AAATGCAGGAGTTTAGAACA+AGG | + | tig0024012:68766-68785 | None:intergenic | 35.0% |
| ACCGATTGAACTCAATTACT+TGG | + | tig0024012:68864-68883 | None:intergenic | 35.0% | |
| ! | ATTCTTTTCTGTTAGAGCTC+CGG | + | tig0024012:68980-68999 | None:intergenic | 35.0% |
| GCACATACATTGTTAGGTAT+CGG | - | tig0024012:69074-69093 | Msa1413190:CDS | 35.0% | |
| CACATACATTGTTAGGTATC+GGG | - | tig0024012:69075-69094 | Msa1413190:CDS | 35.0% | |
| !! | ATGCAGTATTTGTGCTGATT+AGG | - | tig0024012:69178-69197 | Msa1413190:intron | 35.0% |
| !!! | TTTTTCTCTGGGATTACAGA+GGG | - | tig0024012:69379-69398 | Msa1413190:CDS | 35.0% |
| GCATCATTCAGTGTAATCAT+AGG | - | tig0024012:69533-69552 | Msa1413190:intron | 35.0% | |
| TTCAGTGTAATCATAGGTGT+CGG | - | tig0024012:69539-69558 | Msa1413190:intron | 35.0% | |
| ! | ATGTCAGAGCTTTAGTACAT+CGG | - | tig0024012:69798-69817 | Msa1413190:intron | 35.0% |
| ATGGCATGTTACCTACAAAA+GGG | + | tig0024012:69828-69847 | None:intergenic | 35.0% | |
| TATGGCATGTTACCTACAAA+AGG | + | tig0024012:69829-69848 | None:intergenic | 35.0% | |
| GTTCCATTGTGAAACAATGT+TGG | - | tig0024012:70161-70180 | Msa1413190:intron | 35.0% | |
| GAGAACATCACAAAAGAACT+CGG | + | tig0024012:70251-70270 | None:intergenic | 35.0% | |
| GCAATTAAAAAGACTAGGAC+AGG | + | tig0024012:70318-70337 | None:intergenic | 35.0% | |
| GATCTTTCCATAGAAAAGCA+AGG | - | tig0024012:70345-70364 | Msa1413190:CDS | 35.0% | |
| CTATAAGAGCTTATTGATCC+AGG | + | tig0024012:70453-70472 | None:intergenic | 35.0% | |
| CAAAATAGTGAACAAATGCC+AGG | + | tig0024012:70564-70583 | None:intergenic | 35.0% | |
| ! | TTTGTTCACTATTTTGCTGC+TGG | - | tig0024012:70568-70587 | Msa1413190:intron | 35.0% |
| TAGTGTGATCAACTTTGAGT+TGG | + | tig0024012:70969-70988 | None:intergenic | 35.0% | |
| GCTTACACTAAGACATTTAC+TGG | - | tig0024012:71203-71222 | Msa1413190:intron | 35.0% | |
| TCACCTGATACCTATAATAG+TGG | - | tig0024012:71461-71480 | Msa1413190:intron | 35.0% | |
| CCCAGTAAGAAAAAATTCGT+AGG | + | tig0024012:71852-71871 | None:intergenic | 35.0% | |
| TCAAAGCTTCCATTTCTGTT+CGG | - | tig0024012:72122-72141 | Msa1413190:intron | 35.0% | |
| TAGCTCCATTGTTTATTGGT+CGG | - | tig0024012:72177-72196 | Msa1413190:intron | 35.0% | |
| TGTTGGGTTTATCATCAGTA+AGG | + | tig0024012:72220-72239 | None:intergenic | 35.0% | |
| !! | AAAAGAAGGGATGGTTTGTT+GGG | + | tig0024012:72236-72255 | None:intergenic | 35.0% |
| AGAAGCCATTCTCAAAAGAA+GGG | + | tig0024012:72249-72268 | None:intergenic | 35.0% | |
| ! | ATGTTTTGTAGATCTGCACT+TGG | - | tig0024012:72369-72388 | Msa1413190:intron | 35.0% |
| AATGTAGAAACGCAACATGT+TGG | - | tig0024012:72986-73005 | Msa1413190:intron | 35.0% | |
| CCTCTGTTAAAAACATCATG+TGG | + | tig0024012:73368-73387 | None:intergenic | 35.0% | |
| !! | CCACATGATGTTTTTAACAG+AGG | - | tig0024012:73365-73384 | Msa1413190:intron | 35.0% |
| TTTAACAGAGGAGATGATAC+AGG | - | tig0024012:73377-73396 | Msa1413190:intron | 35.0% | |
| TTAACAGAGGAGATGATACA+GGG | - | tig0024012:73378-73397 | Msa1413190:intron | 35.0% | |
| GATACAGGGATTACAAAGAT+TGG | - | tig0024012:73392-73411 | Msa1413190:intron | 35.0% | |
| CAGTACATGGATGTTACTAT+GGG | + | tig0024012:73469-73488 | None:intergenic | 35.0% | |
| ATTCAGAGAAATGCAGTACA+TGG | + | tig0024012:73482-73501 | None:intergenic | 35.0% | |
| ATGAGTATTCCTTGGATTTC+AGG | - | tig0024012:73549-73568 | Msa1413190:intron | 35.0% | |
| !! | TCTTTTTCACCTGAAATCCA+AGG | + | tig0024012:73561-73580 | None:intergenic | 35.0% |
| CAGTAAAGGTTTACGAATGT+GGG | + | tig0024012:73700-73719 | None:intergenic | 35.0% | |
| ! | AGAAGAGTGTAAGGTATCTT+TGG | - | tig0024012:73805-73824 | Msa1413190:intron | 35.0% |
| AGAACGTGTTTCTCAAACTA+GGG | - | tig0024012:73855-73874 | Msa1413190:CDS | 35.0% | |
| TTAAGCCATCCAACAAAGAT+TGG | - | tig0024012:74058-74077 | Msa1413190:five_prime_UTR | 35.0% | |
| CAAATTGTGACAAGTTCCAG+CGG | + | tig0024012:68474-68493 | None:intergenic | 40.0% | |
| !! | GTTCTGGTTCCTTTGCTATA+TGG | - | tig0024012:68561-68580 | Msa1413190:three_prime_UTR | 40.0% |
| CTACAACGCGCGTAAATAAA+AGG | + | tig0024012:68598-68617 | None:intergenic | 40.0% | |
| GTGAGTGAAAATGAAGCTAG+GGG | + | tig0024012:68692-68711 | None:intergenic | 40.0% | |
| GGTGAGTGAAAATGAAGCTA+GGG | + | tig0024012:68693-68712 | None:intergenic | 40.0% | |
| AGGTGAGTGAAAATGAAGCT+AGG | + | tig0024012:68694-68713 | None:intergenic | 40.0% | |
| CTTACTTGCTTGCCAAACTT+TGG | - | tig0024012:68929-68948 | Msa1413190:CDS | 40.0% | |
| CTTGCCAAACTTTGGATTGT+CGG | - | tig0024012:68937-68956 | Msa1413190:CDS | 40.0% | |
| TTGCCAAACTTTGGATTGTC+GGG | - | tig0024012:68938-68957 | Msa1413190:CDS | 40.0% | |
| !! | ATACATTGTTAGGTATCGGG+TGG | - | tig0024012:69078-69097 | Msa1413190:CDS | 40.0% |
| ! | TATTGATTAGGAGCGGTTAC+AGG | - | tig0024012:69230-69249 | Msa1413190:intron | 40.0% |
| CTCTCTGCTCAAAACCAATA+AGG | + | tig0024012:69335-69354 | None:intergenic | 40.0% | |
| AGAGAAATGTCTCTTCTCTG+AGG | - | tig0024012:69353-69372 | Msa1413190:CDS | 40.0% | |
| !!! | CTTTTTCTCTGGGATTACAG+AGG | - | tig0024012:69378-69397 | Msa1413190:CDS | 40.0% |
| ! | ATTCGGGTTCCTATCATACA+TGG | - | tig0024012:69461-69480 | Msa1413190:intron | 40.0% |
| TTCCTATCATACATGGACAC+CGG | - | tig0024012:69468-69487 | Msa1413190:intron | 40.0% | |
| TATGAAGCACATACACTCCT+AGG | + | tig0024012:69601-69620 | None:intergenic | 40.0% | |
| AAGGTCACTTGTTCAAGTCT+TGG | - | tig0024012:69693-69712 | Msa1413190:intron | 40.0% | |
| CTGTGTCCAATACACCAAAA+TGG | - | tig0024012:69749-69768 | Msa1413190:intron | 40.0% | |
| TGTCCAATACACCAAAATGG+TGG | - | tig0024012:69752-69771 | Msa1413190:intron | 40.0% | |
| GTCCAATACACCAAAATGGT+GGG | - | tig0024012:69753-69772 | Msa1413190:intron | 40.0% | |
| ! | TGTCAGAGCTTTAGTACATC+GGG | - | tig0024012:69799-69818 | Msa1413190:intron | 40.0% |
| TACTCATAGCTTCAGCTCTA+AGG | + | tig0024012:69924-69943 | None:intergenic | 40.0% | |
| ATCATTCTTCAGATTCCCAG+TGG | + | tig0024012:69977-69996 | None:intergenic | 40.0% | |
| ACAAGAACAAGGAGATGATC+AGG | + | tig0024012:70000-70019 | None:intergenic | 40.0% | |
| AGATACCATGGACAAGAACA+AGG | + | tig0024012:70011-70030 | None:intergenic | 40.0% | |
| TTGTTCTTGTCCATGGTATC+TGG | - | tig0024012:70010-70029 | Msa1413190:CDS | 40.0% | |
| ATTACCTAGACCAGATACCA+TGG | + | tig0024012:70023-70042 | None:intergenic | 40.0% | |
| TAAAAGATAGTCTGAACGGC+TGG | - | tig0024012:70079-70098 | Msa1413190:intron | 40.0% | |
| AAAAAAATGTGCCACGCACA+CGG | + | tig0024012:70371-70390 | None:intergenic | 40.0% | |
| !!! | TGTTTTAACTGATACAGCCC+AGG | - | tig0024012:70620-70639 | Msa1413190:intron | 40.0% |
| !! | GATCAACTTTGAGTTGGCTA+AGG | + | tig0024012:70963-70982 | None:intergenic | 40.0% |
| TTTACTGGGATTGATGAAGC+TGG | - | tig0024012:71218-71237 | Msa1413190:intron | 40.0% | |
| GCATGACCTGTTGTGATAAA+AGG | + | tig0024012:71346-71365 | None:intergenic | 40.0% | |
| AAATAGGCCTCCAAGAGAAT+GGG | + | tig0024012:71414-71433 | None:intergenic | 40.0% | |
| TGGCCACTATTATAGGTATC+AGG | + | tig0024012:71467-71486 | None:intergenic | 40.0% | |
| !! | ATCAGGTTGGCCACTATTAT+AGG | + | tig0024012:71474-71493 | None:intergenic | 40.0% |
| !! | TCACAGACAGACTTTTCAAG+AGG | - | tig0024012:71521-71540 | Msa1413190:intron | 40.0% |
| !! | CACAGACAGACTTTTCAAGA+GGG | - | tig0024012:71522-71541 | Msa1413190:intron | 40.0% |
| !! | TTTTCAAGAGGGATGATTGC+TGG | - | tig0024012:71533-71552 | Msa1413190:intron | 40.0% |
| AGCAATGGAAGAGAAAACGA+TGG | + | tig0024012:71957-71976 | None:intergenic | 40.0% | |
| TGCATGCAATGAAGATCTTG+TGG | + | tig0024012:72025-72044 | None:intergenic | 40.0% | |
| !!! | GCAACAAGCTTTTCTAGGAT+CGG | + | tig0024012:72152-72171 | None:intergenic | 40.0% |
| CCAATAAACAATGGAGCTAC+AGG | + | tig0024012:72176-72195 | None:intergenic | 40.0% | |
| CCTGTAGCTCCATTGTTTAT+TGG | - | tig0024012:72173-72192 | Msa1413190:intron | 40.0% | |
| ! | CAAAAGAAGGGATGGTTTGT+TGG | + | tig0024012:72237-72256 | None:intergenic | 40.0% |
| !! | ACCATCCCTTCTTTTGAGAA+TGG | - | tig0024012:72241-72260 | Msa1413190:intron | 40.0% |
| CAGAAGCCATTCTCAAAAGA+AGG | + | tig0024012:72250-72269 | None:intergenic | 40.0% | |
| ! | AGTGTCACTAATACACTGGA+AGG | + | tig0024012:72443-72462 | None:intergenic | 40.0% |
| CCACCCAACCATATCTATAT+AGG | + | tig0024012:72505-72524 | None:intergenic | 40.0% | |
| CCTATATAGATATGGTTGGG+TGG | - | tig0024012:72502-72521 | Msa1413190:intron | 40.0% | |
| AAGTTCGATTTCCCTCCTTA+TGG | + | tig0024012:72538-72557 | None:intergenic | 40.0% | |
| ATAAGGAGGGAAATCGAACT+TGG | - | tig0024012:72537-72556 | Msa1413190:CDS | 40.0% | |
| AGTAGTTGAACTCCTGAATG+TGG | - | tig0024012:72708-72727 | Msa1413190:intron | 40.0% | |
| TGAACTCCTGAATGTGGTTA+AGG | - | tig0024012:72714-72733 | Msa1413190:intron | 40.0% | |
| GCATTATAGTCAGGCGTTAT+AGG | + | tig0024012:72774-72793 | None:intergenic | 40.0% | |
| AAAGGAAAACACCTGATCTG+TGG | - | tig0024012:73023-73042 | Msa1413190:intron | 40.0% | |
| GCTTGTATCCATCCAAAGAT+TGG | + | tig0024012:73117-73136 | None:intergenic | 40.0% | |
| AGGGATTACAAAGATTGGGA+TGG | - | tig0024012:73397-73416 | Msa1413190:intron | 40.0% | |
| TCAACTTTCACTCAGCAGTT+TGG | - | tig0024012:73433-73452 | Msa1413190:intron | 40.0% | |
| ATGTTACTATGGGCAAAGAG+AGG | + | tig0024012:73459-73478 | None:intergenic | 40.0% | |
| GCAGTACATGGATGTTACTA+TGG | + | tig0024012:73470-73489 | None:intergenic | 40.0% | |
| AAGAAATGGCTTCACAATGC+TGG | - | tig0024012:73577-73596 | Msa1413190:intron | 40.0% | |
| CCAGTAAAGGTTTACGAATG+TGG | + | tig0024012:73701-73720 | None:intergenic | 40.0% | |
| CCACATTCGTAAACCTTTAC+TGG | - | tig0024012:73698-73717 | Msa1413190:intron | 40.0% | |
| CTACGTGTATAGACCAGTAA+AGG | + | tig0024012:73714-73733 | None:intergenic | 40.0% | |
| ! | CTTTACTGGTCTATACACGT+AGG | - | tig0024012:73712-73731 | Msa1413190:intron | 40.0% |
| GAGAACGTGTTTCTCAAACT+AGG | - | tig0024012:73854-73873 | Msa1413190:CDS | 40.0% | |
| GAACGTGTTTCTCAAACTAG+GGG | - | tig0024012:73856-73875 | Msa1413190:CDS | 40.0% | |
| AACGTGTTTCTCAAACTAGG+GGG | - | tig0024012:73857-73876 | Msa1413190:CDS | 40.0% | |
| GGATGGCTTAATAGAATCTC+TGG | + | tig0024012:74049-74068 | None:intergenic | 40.0% | |
| !!! | TGCCTCTTGGTTTTTTAGCA+CGG | + | tig0024012:74117-74136 | None:intergenic | 40.0% |
| !! | AAAACCAAGAGGCATCGTTA+CGG | - | tig0024012:74123-74142 | Msa1413190:five_prime_UTR | 40.0% |
| AATTGTGAGCCAGATGAGCT+GGG | + | tig0024012:68391-68410 | None:intergenic | 45.0% | |
| TGTTATGACACAACAACCGC+TGG | - | tig0024012:68455-68474 | Msa1413190:three_prime_UTR | 45.0% | |
| ATGCTGCTGCCATATAGCAA+AGG | + | tig0024012:68573-68592 | None:intergenic | 45.0% | |
| AGTGAAAATGAAGCTAGGGG+TGG | + | tig0024012:68689-68708 | None:intergenic | 45.0% | |
| GTTCCCGACAATCCAAAGTT+TGG | + | tig0024012:68944-68963 | None:intergenic | 45.0% | |
| !! | AGGTATCGGGTGGTATTGAT+AGG | - | tig0024012:69088-69107 | Msa1413190:CDS | 45.0% |
| !! | GGTATCGGGTGGTATTGATA+GGG | - | tig0024012:69089-69108 | Msa1413190:CDS | 45.0% |
| !! | TGTGCTGATTAGGAGCAGTT+AGG | - | tig0024012:69188-69207 | Msa1413190:intron | 45.0% |
| ACCATTTGGCCACAACAGTA+GGG | - | tig0024012:69283-69302 | Msa1413190:CDS | 45.0% | |
| !! | TCTCTGAGGAGCTTTTTCTC+TGG | - | tig0024012:69367-69386 | Msa1413190:CDS | 45.0% |
| !! | CTCTGAGGAGCTTTTTCTCT+GGG | - | tig0024012:69368-69387 | Msa1413190:CDS | 45.0% |
| !! | TGTAATCATAGGTGTCGGTG+TGG | - | tig0024012:69544-69563 | Msa1413190:intron | 45.0% |
| !! | GTAATCATAGGTGTCGGTGT+GGG | - | tig0024012:69545-69564 | Msa1413190:intron | 45.0% |
| ATACACTCCTAGGTGTGTCA+CGG | + | tig0024012:69591-69610 | None:intergenic | 45.0% | |
| ! | GTTGCTGTTACGTGACAGAA+AGG | - | tig0024012:69674-69693 | Msa1413190:intron | 45.0% |
| !! | GTCCCACCATTTTGGTGTAT+TGG | + | tig0024012:69758-69777 | None:intergenic | 45.0% |
| ! | AAAAAGGGGTCCCACCATTT+TGG | + | tig0024012:69766-69785 | None:intergenic | 45.0% |
| !! | AAATGGTGGGACCCCTTTTT+CGG | - | tig0024012:69766-69785 | Msa1413190:intron | 45.0% |
| ! | CTAAAGCTCTGACATACGCA+GGG | + | tig0024012:69793-69812 | None:intergenic | 45.0% |
| ! | ACTAAAGCTCTGACATACGC+AGG | + | tig0024012:69794-69813 | None:intergenic | 45.0% |
| ATGTTGGAGAGAACTTCTGC+AGG | - | tig0024012:69871-69890 | Msa1413190:intron | 45.0% | |
| ACTTCTGCAGGTGCAAACAA+AGG | - | tig0024012:69883-69902 | Msa1413190:intron | 45.0% | |
| AGCTATGAGTACTACCACTC+AGG | - | tig0024012:69933-69952 | Msa1413190:intron | 45.0% | |
| GCTATGAGTACTACCACTCA+GGG | - | tig0024012:69934-69953 | Msa1413190:intron | 45.0% | |
| AAGTCTCCTGCTAAAACCAC+TGG | - | tig0024012:69958-69977 | Msa1413190:intron | 45.0% | |
| AGTCTCCTGCTAAAACCACT+GGG | - | tig0024012:69959-69978 | Msa1413190:intron | 45.0% | |
| !!! | AGATTCCCAGTGGTTTTAGC+AGG | + | tig0024012:69967-69986 | None:intergenic | 45.0% |
| CATCTCCTTGTTCTTGTCCA+TGG | - | tig0024012:70003-70022 | Msa1413190:CDS | 45.0% | |
| TTGTCCATGGTATCTGGTCT+AGG | - | tig0024012:70016-70035 | Msa1413190:intron | 45.0% | |
| CTCATGTGAGCAAGTGTTTG+AGG | - | tig0024012:70268-70287 | Msa1413190:CDS | 45.0% | |
| TGTACTGTTTGTACCGCAAG+CGG | - | tig0024012:70536-70555 | Msa1413190:intron | 45.0% | |
| !!! | GCTGGTTTTTGCTCTCCAAT+TGG | - | tig0024012:70586-70605 | Msa1413190:intron | 45.0% |
| TTGGGATGATTGCGTTGTTG+CGG | - | tig0024012:70921-70940 | Msa1413190:intron | 45.0% | |
| ! | TTTTTGTCCAATGCAGCGCA+CGG | - | tig0024012:71288-71307 | Msa1413190:CDS | 45.0% |
| AAGGATATTCGCTTCAGGCT+CGG | + | tig0024012:71386-71405 | None:intergenic | 45.0% | |
| CCAGAAAGGATATTCGCTTC+AGG | + | tig0024012:71391-71410 | None:intergenic | 45.0% | |
| CCTGAAGCGAATATCCTTTC+TGG | - | tig0024012:71388-71407 | Msa1413190:intron | 45.0% | |
| CAAATAGGCCTCCAAGAGAA+TGG | + | tig0024012:71415-71434 | None:intergenic | 45.0% | |
| !! | AGTTTGCTGGATCATCAGGT+TGG | + | tig0024012:71487-71506 | None:intergenic | 45.0% |
| ! | TTTTCCATCTCGCAGTTTGC+TGG | + | tig0024012:71500-71519 | None:intergenic | 45.0% |
| ACTTTAGCAACTCCGCATCT+TGG | - | tig0024012:71578-71597 | Msa1413190:intron | 45.0% | |
| ATCGGAACACCGAACAGAAA+TGG | + | tig0024012:72134-72153 | None:intergenic | 45.0% | |
| CCAGTCCGACCAATAAACAA+TGG | + | tig0024012:72185-72204 | None:intergenic | 45.0% | |
| CCATTGTTTATTGGTCGGAC+TGG | - | tig0024012:72182-72201 | Msa1413190:intron | 45.0% | |
| GCCATTCTCAAAAGAAGGGA+TGG | + | tig0024012:72245-72264 | None:intergenic | 45.0% | |
| ATGGCTTCTGACTGTGAAGA+TGG | - | tig0024012:72260-72279 | Msa1413190:intron | 45.0% | |
| TTCGATTTCCCTCCTTATGG+AGG | + | tig0024012:72535-72554 | None:intergenic | 45.0% | |
| GAGGGAAATCGAACTTGGTA+AGG | - | tig0024012:72542-72561 | Msa1413190:CDS | 45.0% | |
| TACACGCCTTAACCACATTC+AGG | + | tig0024012:72723-72742 | None:intergenic | 45.0% | |
| AACACCTGATCTGTGGAAGT+TGG | - | tig0024012:73030-73049 | Msa1413190:intron | 45.0% | |
| ACACCTGATCTGTGGAAGTT+GGG | - | tig0024012:73031-73050 | Msa1413190:intron | 45.0% | |
| TATCCATCCAAAGATTGGCG+TGG | + | tig0024012:73112-73131 | None:intergenic | 45.0% | |
| ! | AGTGTCAGGAGAAGAGTGTA+AGG | - | tig0024012:73796-73815 | Msa1413190:intron | 45.0% |
| GTCCGTGCTAAAAAACCAAG+AGG | - | tig0024012:74112-74131 | Msa1413190:five_prime_UTR | 45.0% | |
| !! | AAACCAAGAGGCATCGTTAC+GGG | - | tig0024012:74124-74143 | Msa1413190:five_prime_UTR | 45.0% |
| GTTACGGGCACAAGATCATT+TGG | - | tig0024012:74139-74158 | Msa1413190:five_prime_UTR | 45.0% | |
| !!! | ATTTTAATATATAGTTATTT+AGG | - | tig0024012:69133-69152 | Msa1413190:CDS | 5.0% |
| !! | TAATATTAATATTAAATATC+TGG | - | tig0024012:72640-72659 | Msa1413190:intron | 5.0% |
| CAATTGTGAGCCAGATGAGC+TGG | + | tig0024012:68392-68411 | None:intergenic | 50.0% | |
| TGGAGGAAGAAGAGCAACAG+GGG | + | tig0024012:68669-68688 | None:intergenic | 50.0% | |
| GTGGAGGAAGAAGAGCAACA+GGG | + | tig0024012:68670-68689 | None:intergenic | 50.0% | |
| GAAAATGAAGCTAGGGGTGG+AGG | + | tig0024012:68686-68705 | None:intergenic | 50.0% | |
| GACCATTTGGCCACAACAGT+AGG | - | tig0024012:69282-69301 | Msa1413190:CDS | 50.0% | |
| CCATTTGGCCACAACAGTAG+GGG | - | tig0024012:69284-69303 | Msa1413190:CDS | 50.0% | |
| CATTTGGCCACAACAGTAGG+GGG | - | tig0024012:69285-69304 | Msa1413190:CDS | 50.0% | |
| CTGAATTCCCCCTACTGTTG+TGG | + | tig0024012:69295-69314 | None:intergenic | 50.0% | |
| GTCCGGTGTCCATGTATGAT+AGG | + | tig0024012:69473-69492 | None:intergenic | 50.0% | |
| ATCATACATGGACACCGGAC+AGG | - | tig0024012:69473-69492 | Msa1413190:intron | 50.0% | |
| AGACTGTGTCGCATTCTCTC+TGG | - | tig0024012:69620-69639 | Msa1413190:intron | 50.0% | |
| GACTGTGTCGCATTCTCTCT+GGG | - | tig0024012:69621-69640 | Msa1413190:intron | 50.0% | |
| ACTGTGTCGCATTCTCTCTG+GGG | - | tig0024012:69622-69641 | Msa1413190:intron | 50.0% | |
| ATACGCAGGGTCCGAAAAAG+GGG | + | tig0024012:69780-69799 | None:intergenic | 50.0% | |
| CATACGCAGGGTCCGAAAAA+GGG | + | tig0024012:69781-69800 | None:intergenic | 50.0% | |
| ACATACGCAGGGTCCGAAAA+AGG | + | tig0024012:69782-69801 | None:intergenic | 50.0% | |
| AAGATAGTCTGAACGGCTGG+TGG | - | tig0024012:70082-70101 | Msa1413190:intron | 50.0% | |
| !! | CACACGGCCTTGCTTTTCTA+TGG | + | tig0024012:70355-70374 | None:intergenic | 50.0% |
| ! | TCCTTTCTGGCCCATTCTCT+TGG | - | tig0024012:71401-71420 | Msa1413190:intron | 50.0% |
| TCCAAGAGAATGGGCCAGAA+AGG | + | tig0024012:71405-71424 | None:intergenic | 50.0% | |
| ! | TTTCTGGCCCATTCTCTTGG+AGG | - | tig0024012:71404-71423 | Msa1413190:intron | 50.0% |
| !! | TCGCAGTTTGCTGGATCATC+AGG | + | tig0024012:71491-71510 | None:intergenic | 50.0% |
| TGATCCAGCAAACTGCGAGA+TGG | - | tig0024012:71493-71512 | Msa1413190:intron | 50.0% | |
| AAGAGGGATGATTGCTGGAC+TGG | - | tig0024012:71538-71557 | Msa1413190:intron | 50.0% | |
| TTCCCTCTTACGCCAAGATG+CGG | + | tig0024012:71593-71612 | None:intergenic | 50.0% | |
| ! | CAGGCGCAACAAGCTTTTCT+AGG | + | tig0024012:72157-72176 | None:intergenic | 50.0% |
| CTTCCCAACTTCCACAGATC+AGG | + | tig0024012:73037-73056 | None:intergenic | 50.0% | |
| CTGATCTGTGGAAGTTGGGA+AGG | - | tig0024012:73035-73054 | Msa1413190:intron | 50.0% | |
| AGGTCCATCGGAAGGAATTG+GGG | + | tig0024012:73164-73183 | None:intergenic | 50.0% | |
| GAGGTCCATCGGAAGGAATT+GGG | + | tig0024012:73165-73184 | None:intergenic | 50.0% | |
| TGAGGTCCATCGGAAGGAAT+TGG | + | tig0024012:73166-73185 | None:intergenic | 50.0% | |
| GGAAATTGAGGTCCATCGGA+AGG | + | tig0024012:73172-73191 | None:intergenic | 50.0% | |
| CGGAGGAAATTGAGGTCCAT+CGG | + | tig0024012:73176-73195 | None:intergenic | 50.0% | |
| CGATGGACCTCAATTTCCTC+CGG | - | tig0024012:73174-73193 | Msa1413190:intron | 50.0% | |
| TCCTTTGCTTTCACTGCCTC+CGG | + | tig0024012:73196-73215 | None:intergenic | 50.0% | |
| TGGCTTCACAATGCTGGTGT+AGG | - | tig0024012:73583-73602 | Msa1413190:intron | 50.0% | |
| AGCAACTTGTGGTTCCAACG+CGG | + | tig0024012:74084-74103 | None:intergenic | 50.0% | |
| GACTCAACAGCAGCAACTTG+TGG | + | tig0024012:74095-74114 | None:intergenic | 50.0% | |
| GGAGGAAGAAGAGCAACAGG+GGG | + | tig0024012:68668-68687 | None:intergenic | 55.0% | |
| GGTGGAGGAAGAAGAGCAAC+AGG | + | tig0024012:68671-68690 | None:intergenic | 55.0% | |
| CTGTTAGAGCTCCGGTTCAG+CGG | + | tig0024012:68972-68991 | None:intergenic | 55.0% | |
| CCCCTACTGTTGTGGCCAAA+TGG | + | tig0024012:69287-69306 | None:intergenic | 55.0% | |
| CACCGGACAGGACACAAACA+CGG | - | tig0024012:69485-69504 | Msa1413190:intron | 55.0% | |
| GTCCGTGTTTGTGTCCTGTC+CGG | + | tig0024012:69490-69509 | None:intergenic | 55.0% | |
| !! | ATAGGTGTCGGTGTGGGACA+CGG | - | tig0024012:69551-69570 | Msa1413190:intron | 55.0% |
| TCCTAGGTGTGTCACGGTGT+CGG | + | tig0024012:69585-69604 | None:intergenic | 55.0% | |
| CTGTGTCGCATTCTCTCTGG+GGG | - | tig0024012:69623-69642 | Msa1413190:intron | 55.0% | |
| TGTGTCGCATTCTCTCTGGG+GGG | - | tig0024012:69624-69643 | Msa1413190:intron | 55.0% | |
| ! | ACATCGGGCTGCCCTTTTGT+AGG | - | tig0024012:69814-69833 | Msa1413190:intron | 55.0% |
| AGCAGGAGACTTTCCCTGAG+TGG | + | tig0024012:69950-69969 | None:intergenic | 55.0% | |
| ACTGATACAGCCCAGGTGAC+TGG | - | tig0024012:70627-70646 | Msa1413190:intron | 55.0% | |
| CCGCATAACTCCAGTCACCT+GGG | + | tig0024012:70640-70659 | None:intergenic | 55.0% | |
| CCCAGGTGACTGGAGTTATG+CGG | - | tig0024012:70637-70656 | Msa1413190:intron | 55.0% | |
| TCCGCATAACTCCAGTCACC+TGG | + | tig0024012:70641-70660 | None:intergenic | 55.0% | |
| AGGTGACTGGAGTTATGCGG+AGG | - | tig0024012:70640-70659 | Msa1413190:intron | 55.0% | |
| TTCAGAACCGTGCGCTGCAT+TGG | + | tig0024012:71298-71317 | None:intergenic | 55.0% | |
| ACTCCGCATCTTGGCGTAAG+AGG | - | tig0024012:71587-71606 | Msa1413190:intron | 55.0% | |
| CTCCGCATCTTGGCGTAAGA+GGG | - | tig0024012:71588-71607 | Msa1413190:intron | 55.0% | |
| AAGATTGGCGTGGAGGCTGT+CGG | + | tig0024012:73102-73121 | None:intergenic | 55.0% | |
| ACAGCCTCCACGCCAATCTT+TGG | - | tig0024012:73102-73121 | Msa1413190:intron | 55.0% | |
| CCATCCAAAGATTGGCGTGG+AGG | + | tig0024012:73109-73128 | None:intergenic | 55.0% | |
| CCTCCACGCCAATCTTTGGA+TGG | - | tig0024012:73106-73125 | Msa1413190:intron | 55.0% | |
| TGTCCCCCAATTCCTTCCGA+TGG | - | tig0024012:73157-73176 | Msa1413190:intron | 55.0% | |
| GGTCCATCGGAAGGAATTGG+GGG | + | tig0024012:73163-73182 | None:intergenic | 55.0% | |
| TGGACCTCAATTTCCTCCGG+AGG | - | tig0024012:73177-73196 | Msa1413190:intron | 55.0% | |
| ACTGCCTCCGGAGGAAATTG+AGG | + | tig0024012:73184-73203 | None:intergenic | 55.0% | |
| TTTGCTTTCACTGCCTCCGG+AGG | + | tig0024012:73193-73212 | None:intergenic | 55.0% | |
| TCCGGAGGCAGTGAAAGCAA+AGG | - | tig0024012:73192-73211 | Msa1413190:intron | 55.0% | |
| CGCGGCCAATCTTTGTTGGA+TGG | + | tig0024012:74066-74085 | None:intergenic | 55.0% | |
| CCAACGCGGCCAATCTTTGT+TGG | + | tig0024012:74070-74089 | None:intergenic | 55.0% | |
| ! | CCAACAAAGATTGGCCGCGT+TGG | - | tig0024012:74067-74086 | Msa1413190:five_prime_UTR | 55.0% |
| ATGGCCACCGCCTACCAATC+AGG | + | tig0024012:68368-68387 | None:intergenic | 60.0% | |
| GTGAGCCAGATGAGCTGGGA+TGG | + | tig0024012:68387-68406 | None:intergenic | 60.0% | |
| CAGGGGGAGGATGAGGAAGA+AGG | + | tig0024012:68652-68671 | None:intergenic | 60.0% | |
| AGAGCAACAGGGGGAGGATG+AGG | + | tig0024012:68659-68678 | None:intergenic | 60.0% | |
| GGAAGAAGAGCAACAGGGGG+AGG | + | tig0024012:68665-68684 | None:intergenic | 60.0% | |
| GGGAACCCTTTCCGCTGAAC+CGG | - | tig0024012:68958-68977 | Msa1413190:intron | 60.0% | |
| GAGCTCCGGTTCAGCGGAAA+GGG | + | tig0024012:68966-68985 | None:intergenic | 60.0% | |
| AGAGCTCCGGTTCAGCGGAA+AGG | + | tig0024012:68967-68986 | None:intergenic | 60.0% | |
| TCCGACACCGTGACACACCT+AGG | - | tig0024012:69581-69600 | Msa1413190:intron | 60.0% | |
| ! | GTGTCGCATTCTCTCTGGGG+GGG | - | tig0024012:69625-69644 | Msa1413190:intron | 60.0% |
| ! | TGTCGCATTCTCTCTGGGGG+GGG | - | tig0024012:69626-69645 | Msa1413190:intron | 60.0% |
| GAAAAGCAAGGCCGTGTGCG+TGG | - | tig0024012:70357-70376 | Msa1413190:CDS | 60.0% | |
| TTTGTACCGCAAGCGGTGCC+TGG | - | tig0024012:70543-70562 | Msa1413190:intron | 60.0% | |
| ! | CAAATGCCAGGCACCGCTTG+CGG | + | tig0024012:70552-70571 | None:intergenic | 60.0% |
| !! | GCAGCGCACGGTTCTGAATC+AGG | - | tig0024012:71300-71319 | Msa1413190:CDS | 60.0% |
| GCGCACGTCCTCCATAAGGA+GGG | - | tig0024012:72524-72543 | Msa1413190:CDS | 60.0% | |
| GTGCCCGTAACGATGCCTCT+TGG | + | tig0024012:74130-74149 | None:intergenic | 60.0% | |
| GGTGGCCATCCCAGCTCATC+TGG | - | tig0024012:68379-68398 | Msa1413190:three_prime_UTR | 65.0% | |
| ! | GTCGCATTCTCTCTGGGGGG+GGG | - | tig0024012:69627-69646 | Msa1413190:intron | 65.0% |
| ! | TCGCATTCTCTCTGGGGGGG+GGG | - | tig0024012:69628-69647 | Msa1413190:intron | 65.0% |
| GGTGGCGCACGTCCTCCATA+AGG | - | tig0024012:72520-72539 | Msa1413190:CDS | 65.0% | |
| GGCGCACGTCCTCCATAAGG+AGG | - | tig0024012:72523-72542 | Msa1413190:CDS | 65.0% | |
| ! | CGCATTCTCTCTGGGGGGGG+GGG | - | tig0024012:69629-69648 | Msa1413190:intron | 70.0% |
| ! | GCATTCTCTCTGGGGGGGGG+GGG | - | tig0024012:69630-69649 | Msa1413190:intron | 70.0% |
| ! | CATTCTCTCTGGGGGGGGGG+GGG | - | tig0024012:69631-69650 | Msa1413190:intron | 70.0% |
| ! | ATTCTCTCTGGGGGGGGGGG+GGG | - | tig0024012:69632-69651 | Msa1413190:intron | 70.0% |
| ! | TTCTCTCTGGGGGGGGGGGG+GGG | - | tig0024012:69633-69652 | Msa1413190:intron | 75.0% |
| GGGGGGGGGTCTTGGCGCAA+CGG | - | tig0024012:69647-69666 | Msa1413190:intron | 75.0% | |
| ! | CTGGGGGGGGGGGGGGGTCT+TGG | - | tig0024012:69639-69658 | Msa1413190:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024012 | gene | 68363 | 74179 | 68363 | ID=Msa1413190;Name=Msa1413190 |
| tig0024012 | mRNA | 68363 | 74179 | 68363 | ID=Msa1413190-mRNA-1;Parent=Msa1413190;Name=Msa1413190-mRNA-1;_AED=0.17;_eAED=0.17;_QI=217|1|1|1|0.9|0.81|11|507|438 |
| tig0024012 | exon | 68363 | 68971 | 68363 | ID=Msa1413190-mRNA-1:exon:21011;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 69060 | 69157 | 69060 | ID=Msa1413190-mRNA-1:exon:21010;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 69277 | 69436 | 69277 | ID=Msa1413190-mRNA-1:exon:21009;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 69979 | 70031 | 69979 | ID=Msa1413190-mRNA-1:exon:21008;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 70107 | 70162 | 70107 | ID=Msa1413190-mRNA-1:exon:21007;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 70251 | 70414 | 70251 | ID=Msa1413190-mRNA-1:exon:21006;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 70923 | 71183 | 70923 | ID=Msa1413190-mRNA-1:exon:21005;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 71283 | 71353 | 71283 | ID=Msa1413190-mRNA-1:exon:21004;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 71838 | 71905 | 71838 | ID=Msa1413190-mRNA-1:exon:21003;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 72505 | 72649 | 72505 | ID=Msa1413190-mRNA-1:exon:21002;Parent=Msa1413190-mRNA-1 |
| tig0024012 | exon | 73824 | 74179 | 73824 | ID=Msa1413190-mRNA-1:exon:21001;Parent=Msa1413190-mRNA-1 |
| tig0024012 | five_prime_UTR | 73963 | 74179 | 73963 | ID=Msa1413190-mRNA-1:five_prime_utr;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 73824 | 73962 | 73824 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 72505 | 72649 | 72505 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 71838 | 71905 | 71838 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 71283 | 71353 | 71283 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 70923 | 71183 | 70923 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 70251 | 70414 | 70251 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 70107 | 70162 | 70107 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 69979 | 70031 | 69979 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 69277 | 69436 | 69277 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 69060 | 69157 | 69060 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | CDS | 68870 | 68971 | 68870 | ID=Msa1413190-mRNA-1:cds;Parent=Msa1413190-mRNA-1 |
| tig0024012 | three_prime_UTR | 68363 | 68869 | 68363 | ID=Msa1413190-mRNA-1:three_prime_utr;Parent=Msa1413190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
