Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402010 | XP_003591212.1 | 99.292 | 424 | 2 | 1 | 27 | 450 | 1 | 423 | 0.0 | 844 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402010 | sp|Q9XF98|CALR_PRUAR | 86.881 | 404 | 52 | 1 | 27 | 430 | 1 | 403 | 0.0 | 643 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402010 | G7I9H2 | 99.292 | 424 | 2 | 1 | 27 | 450 | 1 | 423 | 0.0 | 844 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa1402010 | 0.824131 | 9.530966e-54 | -8.615850e-47 |
| Msa0001800 | Msa1402010 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0021290 | Msa1402010 | 0.859466 | 4.056687e-63 | -8.615850e-47 |
| Msa0021320 | Msa1402010 | 0.870446 | 1.450480e-66 | -8.615850e-47 |
| Msa0036810 | Msa1402010 | 0.822638 | 2.128076e-53 | -8.615850e-47 |
| Msa0040220 | Msa1402010 | 0.843360 | 1.469937e-58 | -8.615850e-47 |
| Msa0044780 | Msa1402010 | -0.819089 | 1.394603e-52 | -8.615850e-47 |
| Msa0045620 | Msa1402010 | 0.802464 | 5.542224e-49 | -8.615850e-47 |
| Msa0045810 | Msa1402010 | 0.843090 | 1.734987e-58 | -8.615850e-47 |
| Msa0046200 | Msa1402010 | 0.811284 | 7.561157e-51 | -8.615850e-47 |
| Msa0063190 | Msa1402010 | 0.811150 | 8.083185e-51 | -8.615850e-47 |
| Msa0080370 | Msa1402010 | 0.916940 | 9.718371e-86 | -8.615850e-47 |
| Msa0080440 | Msa1402010 | 0.862179 | 6.087134e-64 | -8.615850e-47 |
| Msa0100600 | Msa1402010 | 0.826562 | 2.534241e-54 | -8.615850e-47 |
| Msa0100890 | Msa1402010 | 0.805262 | 1.453493e-49 | -8.615850e-47 |
| Msa0108630 | Msa1402010 | 0.841227 | 5.399450e-58 | -8.615850e-47 |
| Msa1347390 | Msa1402010 | 0.813432 | 2.566719e-51 | -8.615850e-47 |
| Msa1364110 | Msa1402010 | 0.804880 | 1.746871e-49 | -8.615850e-47 |
| Msa1371800 | Msa1402010 | 0.804546 | 2.051006e-49 | -8.615850e-47 |
| Msa1376310 | Msa1402010 | 0.809070 | 2.268606e-50 | -8.615850e-47 |
| Msa1380040 | Msa1402010 | 0.812245 | 4.671083e-51 | -8.615850e-47 |
| Msa1387570 | Msa1402010 | 0.850672 | 1.459013e-60 | -8.615850e-47 |
| Msa1389820 | Msa1402010 | 0.803027 | 4.239343e-49 | -8.615850e-47 |
| Msa1393560 | Msa1402010 | 0.825157 | 5.463950e-54 | -8.615850e-47 |
| Msa1395050 | Msa1402010 | 0.801836 | 7.462777e-49 | -8.615850e-47 |
| Msa1396100 | Msa1402010 | 0.804498 | 2.098554e-49 | -8.615850e-47 |
| Msa1399190 | Msa1402010 | 0.826473 | 2.660514e-54 | -8.615850e-47 |
| Msa1402010 | Msa1406090 | 0.817001 | 4.135282e-52 | -8.615850e-47 |
| Msa1402010 | Msa1407810 | 0.807721 | 4.401100e-50 | -8.615850e-47 |
| Msa1402010 | Msa1413020 | 0.808501 | 3.002177e-50 | -8.615850e-47 |
| Msa1402010 | Msa1421630 | 0.825794 | 3.858791e-54 | -8.615850e-47 |
| Msa1402010 | Msa1426320 | 0.826091 | 3.281770e-54 | -8.615850e-47 |
| Msa1402010 | Msa1433360 | 0.804476 | 2.121182e-49 | -8.615850e-47 |
| Msa1402010 | Msa1437780 | 0.806736 | 7.115643e-50 | -8.615850e-47 |
| Msa1402010 | Msa1439920 | 0.804541 | 2.056096e-49 | -8.615850e-47 |
| Msa1402010 | Msa1457770 | 0.802224 | 6.210124e-49 | -8.615850e-47 |
| Msa1402010 | Msa1462780 | 0.808408 | 3.143621e-50 | -8.615850e-47 |
| Msa0607800 | Msa1402010 | 0.827176 | 1.808160e-54 | -8.615850e-47 |
| Msa0617940 | Msa1402010 | 0.802279 | 6.049144e-49 | -8.615850e-47 |
| Msa0623310 | Msa1402010 | 0.800133 | 1.662661e-48 | -8.615850e-47 |
| Msa0630440 | Msa1402010 | 0.877387 | 6.547200e-69 | -8.615850e-47 |
| Msa0646590 | Msa1402010 | 0.804401 | 2.198787e-49 | -8.615850e-47 |
| Msa0647440 | Msa1402010 | 0.829020 | 6.502535e-55 | -8.615850e-47 |
| Msa0648040 | Msa1402010 | 0.846678 | 1.868379e-59 | -8.615850e-47 |
| Msa0657110 | Msa1402010 | -0.801445 | 8.972772e-49 | -8.615850e-47 |
| Msa0659020 | Msa1402010 | -0.805884 | 1.076177e-49 | -8.615850e-47 |
| Msa0661480 | Msa1402010 | 0.833681 | 4.637395e-56 | -8.615850e-47 |
| Msa0664070 | Msa1402010 | 0.802859 | 4.593953e-49 | -8.615850e-47 |
| Msa0668500 | Msa1402010 | 0.802520 | 5.396818e-49 | -8.615850e-47 |
| Msa0682860 | Msa1402010 | 0.807484 | 4.941272e-50 | -8.615850e-47 |
| Msa0686530 | Msa1402010 | 0.800940 | 1.138683e-48 | -8.615850e-47 |
| Msa0688380 | Msa1402010 | 0.803920 | 2.769045e-49 | -8.615850e-47 |
| Msa0689830 | Msa1402010 | 0.873766 | 1.140290e-67 | -8.615850e-47 |
| Msa0690740 | Msa1402010 | 0.840664 | 7.590085e-58 | -8.615850e-47 |
| Msa0700120 | Msa1402010 | 0.814807 | 1.276495e-51 | -8.615850e-47 |
| Msa0701090 | Msa1402010 | -0.816990 | 4.159595e-52 | -8.615850e-47 |
| Msa0701890 | Msa1402010 | 0.836390 | 9.623142e-57 | -8.615850e-47 |
| Msa0704690 | Msa1402010 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
| Msa0707260 | Msa1402010 | 0.844038 | 9.684342e-59 | -8.615850e-47 |
| Msa0713080 | Msa1402010 | 0.830452 | 2.913812e-55 | -8.615850e-47 |
| Msa0717900 | Msa1402010 | 0.806164 | 9.394143e-50 | -8.615850e-47 |
| Msa0726170 | Msa1402010 | -0.801240 | 9.884691e-49 | -8.615850e-47 |
| Msa0732970 | Msa1402010 | 0.810687 | 1.018230e-50 | -8.615850e-47 |
| Msa0745140 | Msa1402010 | 0.814219 | 1.721834e-51 | -8.615850e-47 |
| Msa0746650 | Msa1402010 | 0.823977 | 1.035732e-53 | -8.615850e-47 |
| Msa0751720 | Msa1402010 | 0.818883 | 1.553489e-52 | -8.615850e-47 |
| Msa0761830 | Msa1402010 | 0.802238 | 6.167551e-49 | -8.615850e-47 |
| Msa0773960 | Msa1402010 | 0.826545 | 2.557945e-54 | -8.615850e-47 |
| Msa0774060 | Msa1402010 | 0.807000 | 6.258171e-50 | -8.615850e-47 |
| Msa0776640 | Msa1402010 | 0.813253 | 2.810685e-51 | -8.615850e-47 |
| Msa0804170 | Msa1402010 | 0.810621 | 1.052162e-50 | -8.615850e-47 |
| Msa0816080 | Msa1402010 | 0.811231 | 7.764801e-51 | -8.615850e-47 |
| Msa0825920 | Msa1402010 | 0.817685 | 2.901385e-52 | -8.615850e-47 |
| Msa0837680 | Msa1402010 | 0.834739 | 2.518492e-56 | -8.615850e-47 |
| Msa0838620 | Msa1402010 | -0.823468 | 1.362748e-53 | -8.615850e-47 |
| Msa0125590 | Msa1402010 | 0.811298 | 7.508105e-51 | -8.615850e-47 |
| Msa0131810 | Msa1402010 | 0.914734 | 1.354342e-84 | -8.615850e-47 |
| Msa0139500 | Msa1402010 | 0.819891 | 9.151423e-53 | -8.615850e-47 |
| Msa0147680 | Msa1402010 | 0.801413 | 9.110055e-49 | -8.615850e-47 |
| Msa0168380 | Msa1402010 | 0.817935 | 2.547245e-52 | -8.615850e-47 |
| Msa0173250 | Msa1402010 | 0.995356 | 1.838206e-215 | -8.615850e-47 |
| Msa0192050 | Msa1402010 | 0.854346 | 1.308327e-61 | -8.615850e-47 |
| Msa0195230 | Msa1402010 | 0.817598 | 3.034267e-52 | -8.615850e-47 |
| Msa0195260 | Msa1402010 | 0.822078 | 2.870571e-53 | -8.615850e-47 |
| Msa0197140 | Msa1402010 | 0.837243 | 5.831465e-57 | -8.615850e-47 |
| Msa0206370 | Msa1402010 | 0.813867 | 2.059556e-51 | -8.615850e-47 |
| Msa0211460 | Msa1402010 | 0.806976 | 6.333285e-50 | -8.615850e-47 |
| Msa0224110 | Msa1402010 | 0.829467 | 5.064703e-55 | -8.615850e-47 |
| Msa0237180 | Msa1402010 | 0.806754 | 7.054874e-50 | -8.615850e-47 |
| Msa1226370 | Msa1402010 | 0.834992 | 2.174244e-56 | -8.615850e-47 |
| Msa1240940 | Msa1402010 | 0.836588 | 8.569362e-57 | -8.615850e-47 |
| Msa1254100 | Msa1402010 | 0.813578 | 2.384374e-51 | -8.615850e-47 |
| Msa1254420 | Msa1402010 | 0.834975 | 2.196053e-56 | -8.615850e-47 |
| Msa1257200 | Msa1402010 | 0.827516 | 1.498739e-54 | -8.615850e-47 |
| Msa1262590 | Msa1402010 | 0.815148 | 1.072653e-51 | -8.615850e-47 |
| Msa1279120 | Msa1402010 | 0.800204 | 1.608641e-48 | -8.615850e-47 |
| Msa1282300 | Msa1402010 | 0.844687 | 6.480012e-59 | -8.615850e-47 |
| Msa1294280 | Msa1402010 | 0.830924 | 2.232058e-55 | -8.615850e-47 |
| Msa1294460 | Msa1402010 | 0.811164 | 8.027334e-51 | -8.615850e-47 |
| Msa1294790 | Msa1402010 | 0.823729 | 1.184118e-53 | -8.615850e-47 |
| Msa1297070 | Msa1402010 | 0.805321 | 1.412548e-49 | -8.615850e-47 |
| Msa1328280 | Msa1402010 | 0.848168 | 7.279027e-60 | -8.615850e-47 |
| Msa1328870 | Msa1402010 | 0.818103 | 2.333783e-52 | -8.615850e-47 |
| Msa1332950 | Msa1402010 | 0.806314 | 8.734732e-50 | -8.615850e-47 |
| Msa1334560 | Msa1402010 | 0.869268 | 3.515563e-66 | -8.615850e-47 |
| Msa1342760 | Msa1402010 | 0.830913 | 2.246053e-55 | -8.615850e-47 |
| Msa0368640 | Msa1402010 | 0.811422 | 7.058882e-51 | -8.615850e-47 |
| Msa0372100 | Msa1402010 | 0.801479 | 8.829960e-49 | -8.615850e-47 |
| Msa0373170 | Msa1402010 | 0.800711 | 1.267566e-48 | -8.615850e-47 |
| Msa0385030 | Msa1402010 | 0.821912 | 3.137296e-53 | -8.615850e-47 |
| Msa0386880 | Msa1402010 | 0.807792 | 4.251802e-50 | -8.615850e-47 |
| Msa0387930 | Msa1402010 | 0.811701 | 6.136349e-51 | -8.615850e-47 |
| Msa0388210 | Msa1402010 | 0.808168 | 3.535427e-50 | -8.615850e-47 |
| Msa0388250 | Msa1402010 | 0.835908 | 1.275945e-56 | -8.615850e-47 |
| Msa0389690 | Msa1402010 | 0.801576 | 8.434902e-49 | -8.615850e-47 |
| Msa0396000 | Msa1402010 | 0.803556 | 3.294441e-49 | -8.615850e-47 |
| Msa0401060 | Msa1402010 | 0.862893 | 3.669589e-64 | -8.615850e-47 |
| Msa0402770 | Msa1402010 | 0.800440 | 1.439648e-48 | -8.615850e-47 |
| Msa0413170 | Msa1402010 | 0.807142 | 5.839597e-50 | -8.615850e-47 |
| Msa0416210 | Msa1402010 | 0.832685 | 8.207839e-56 | -8.615850e-47 |
| Msa0422820 | Msa1402010 | 0.829749 | 4.324601e-55 | -8.615850e-47 |
| Msa0422900 | Msa1402010 | 0.802181 | 6.336929e-49 | -8.615850e-47 |
| Msa0422980 | Msa1402010 | 0.815726 | 7.974064e-52 | -8.615850e-47 |
| Msa0430130 | Msa1402010 | 0.833079 | 6.551977e-56 | -8.615850e-47 |
| Msa0433630 | Msa1402010 | 0.836738 | 7.845792e-57 | -8.615850e-47 |
| Msa0436100 | Msa1402010 | 0.815780 | 7.755461e-52 | -8.615850e-47 |
| Msa0437480 | Msa1402010 | 0.843740 | 1.163831e-58 | -8.615850e-47 |
| Msa0440350 | Msa1402010 | 0.834722 | 2.543711e-56 | -8.615850e-47 |
| Msa0447870 | Msa1402010 | 0.874267 | 7.718637e-68 | -8.615850e-47 |
| Msa0458100 | Msa1402010 | 0.823417 | 1.400886e-53 | -8.615850e-47 |
| Msa0467690 | Msa1402010 | 0.804165 | 2.462315e-49 | -8.615850e-47 |
| Msa0469060 | Msa1402010 | 0.803096 | 4.103810e-49 | -8.615850e-47 |
| Msa0475810 | Msa1402010 | 0.830167 | 3.419853e-55 | -8.615850e-47 |
| Msa0477480 | Msa1402010 | 0.820391 | 7.032320e-53 | -8.615850e-47 |
| Msa0479480 | Msa1402010 | 0.820803 | 5.654177e-53 | -8.615850e-47 |
| Msa0982730 | Msa1402010 | 0.828257 | 9.942716e-55 | -8.615850e-47 |
| Msa1000780 | Msa1402010 | 0.831950 | 1.248106e-55 | -8.615850e-47 |
| Msa1014550 | Msa1402010 | -0.816217 | 6.196869e-52 | -8.615850e-47 |
| Msa1019200 | Msa1402010 | 0.830463 | 2.895272e-55 | -8.615850e-47 |
| Msa1021560 | Msa1402010 | 0.845130 | 4.919598e-59 | -8.615850e-47 |
| Msa1025200 | Msa1402010 | 0.850131 | 2.070043e-60 | -8.615850e-47 |
| Msa1025220 | Msa1402010 | 0.827401 | 1.596771e-54 | -8.615850e-47 |
| Msa1050260 | Msa1402010 | 0.840150 | 1.033902e-57 | -8.615850e-47 |
| Msa1076010 | Msa1402010 | 0.801708 | 7.925788e-49 | -8.615850e-47 |
| Msa1088320 | Msa1402010 | 0.812584 | 3.939170e-51 | -8.615850e-47 |
| Msa1093190 | Msa1402010 | -0.803664 | 3.128978e-49 | -8.615850e-47 |
| Msa1104110 | Msa1402010 | 0.859147 | 5.055833e-63 | -8.615850e-47 |
| Msa0240540 | Msa1402010 | 0.831758 | 1.392443e-55 | -8.615850e-47 |
| Msa0265250 | Msa1402010 | 0.805453 | 1.325283e-49 | -8.615850e-47 |
| Msa0276850 | Msa1402010 | 0.861474 | 1.000589e-63 | -8.615850e-47 |
| Msa0276860 | Msa1402010 | 0.870456 | 1.439480e-66 | -8.615850e-47 |
| Msa0279000 | Msa1402010 | 0.823180 | 1.591499e-53 | -8.615850e-47 |
| Msa0312740 | Msa1402010 | 0.819181 | 1.329005e-52 | -8.615850e-47 |
| Msa0315660 | Msa1402010 | 0.802943 | 4.413613e-49 | -8.615850e-47 |
| Msa0326710 | Msa1402010 | 0.825666 | 4.138637e-54 | -8.615850e-47 |
| Msa0328870 | Msa1402010 | 0.801803 | 7.578221e-49 | -8.615850e-47 |
| Msa0349550 | Msa1402010 | 0.814388 | 1.580716e-51 | -8.615850e-47 |
| Msa0354840 | Msa1402010 | 0.839912 | 1.192733e-57 | -8.615850e-47 |
| Msa0356640 | Msa1402010 | 0.810483 | 1.126991e-50 | -8.615850e-47 |
| Msa1124210 | Msa1402010 | 0.845027 | 5.245456e-59 | -8.615850e-47 |
| Msa1147700 | Msa1402010 | 0.873066 | 1.961160e-67 | -8.615850e-47 |
| Msa1148930 | Msa1402010 | 0.804898 | 1.731849e-49 | -8.615850e-47 |
| Msa1165460 | Msa1402010 | 0.817434 | 3.303700e-52 | -8.615850e-47 |
| Msa1199850 | Msa1402010 | 0.824841 | 6.486586e-54 | -8.615850e-47 |
| Msa1201780 | Msa1402010 | 0.853452 | 2.367236e-61 | -8.615850e-47 |
| Msa1206040 | Msa1402010 | 0.819416 | 1.175092e-52 | -8.615850e-47 |
| Msa1206920 | Msa1402010 | 0.820237 | 7.628798e-53 | -8.615850e-47 |
| Msa1217890 | Msa1402010 | 0.845772 | 3.296028e-59 | -8.615850e-47 |
| Msa1218610 | Msa1402010 | 0.824806 | 6.612005e-54 | -8.615850e-47 |
| Msa1220580 | Msa1402010 | 0.856152 | 3.901488e-62 | -8.615850e-47 |
| Msa0484210 | Msa1402010 | -0.825674 | 4.122233e-54 | -8.615850e-47 |
| Msa0495620 | Msa1402010 | 0.814540 | 1.462609e-51 | -8.615850e-47 |
| Msa0504720 | Msa1402010 | 0.804882 | 1.745016e-49 | -8.615850e-47 |
| Msa0506750 | Msa1402010 | 0.853311 | 2.598632e-61 | -8.615850e-47 |
| Msa0514020 | Msa1402010 | 0.822730 | 2.026178e-53 | -8.615850e-47 |
| Msa0518590 | Msa1402010 | 0.815993 | 6.954283e-52 | -8.615850e-47 |
| Msa0521510 | Msa1402010 | 0.831794 | 1.364304e-55 | -8.615850e-47 |
| Msa0521530 | Msa1402010 | 0.828718 | 7.695322e-55 | -8.615850e-47 |
| Msa0521610 | Msa1402010 | 0.853986 | 1.662153e-61 | -8.615850e-47 |
| Msa0525880 | Msa1402010 | 0.827568 | 1.456231e-54 | -8.615850e-47 |
| Msa0527850 | Msa1402010 | 0.804919 | 1.714511e-49 | -8.615850e-47 |
| Msa0532160 | Msa1402010 | 0.829541 | 4.858400e-55 | -8.615850e-47 |
| Msa0547340 | Msa1402010 | 0.804877 | 1.748934e-49 | -8.615850e-47 |
| Msa0550400 | Msa1402010 | 0.801192 | 1.010891e-48 | -8.615850e-47 |
| Msa0552930 | Msa1402010 | 0.830893 | 2.272489e-55 | -8.615850e-47 |
| Msa0553750 | Msa1402010 | 0.846384 | 2.247149e-59 | -8.615850e-47 |
| Msa0563090 | Msa1402010 | 0.820195 | 7.798254e-53 | -8.615850e-47 |
| Msa0567330 | Msa1402010 | 0.813833 | 2.094874e-51 | -8.615850e-47 |
| Msa0567570 | Msa1402010 | 0.805665 | 1.196514e-49 | -8.615850e-47 |
| Msa0567610 | Msa1402010 | 0.815996 | 6.943036e-52 | -8.615850e-47 |
| Msa0568460 | Msa1402010 | -0.807185 | 5.719730e-50 | -8.615850e-47 |
| Msa0572830 | Msa1402010 | 0.826887 | 2.119816e-54 | -8.615850e-47 |
| Msa0574900 | Msa1402010 | 0.826883 | 2.124803e-54 | -8.615850e-47 |
| Msa0576320 | Msa1402010 | 0.813262 | 2.798502e-51 | -8.615850e-47 |
| Msa0579080 | Msa1402010 | 0.805900 | 1.067682e-49 | -8.615850e-47 |
| Msa0582460 | Msa1402010 | 0.806560 | 7.752848e-50 | -8.615850e-47 |
| Msa0586200 | Msa1402010 | 0.806913 | 6.530609e-50 | -8.615850e-47 |
| Msa0590000 | Msa1402010 | 0.812117 | 4.982448e-51 | -8.615850e-47 |
| Msa0601380 | Msa1402010 | 0.827509 | 1.504651e-54 | -8.615850e-47 |
| Msa0602070 | Msa1402010 | 0.808860 | 2.516038e-50 | -8.615850e-47 |
| Msa0846900 | Msa1402010 | 0.846106 | 2.675382e-59 | -8.615850e-47 |
| Msa0861440 | Msa1402010 | 0.836116 | 1.129890e-56 | -8.615850e-47 |
| Msa0865420 | Msa1402010 | 0.811122 | 8.196950e-51 | -8.615850e-47 |
| Msa0880910 | Msa1402010 | 0.823891 | 1.084999e-53 | -8.615850e-47 |
| Msa0900830 | Msa1402010 | 0.812040 | 5.178981e-51 | -8.615850e-47 |
| Msa0903340 | Msa1402010 | 0.826197 | 3.096020e-54 | -8.615850e-47 |
| Msa0921390 | Msa1402010 | 0.807794 | 4.247067e-50 | -8.615850e-47 |
| Msa0925330 | Msa1402010 | 0.842031 | 3.314386e-58 | -8.615850e-47 |
| Msa0926310 | Msa1402010 | 0.839952 | 1.164579e-57 | -8.615850e-47 |
| Msa0930770 | Msa1402010 | 0.860030 | 2.743287e-63 | -8.615850e-47 |
| Msa0945900 | Msa1402010 | 0.810054 | 1.394985e-50 | -8.615850e-47 |
| Msa0966120 | Msa1402010 | 0.856834 | 2.460743e-62 | -8.615850e-47 |
| Msa0967780 | Msa1402010 | 0.837326 | 5.551278e-57 | -8.615850e-47 |
| Msa0976380 | Msa1402010 | 0.818800 | 1.622500e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402010 | MtrunA17_Chr1g0192661 | 99.292 | 424 | 2 | 1 | 27 | 450 | 1 | 423 | 0.0 | 844 |
| Msa1402010 | MtrunA17_Chr7g0249551 | 63.897 | 349 | 124 | 1 | 36 | 382 | 9 | 357 | 3.20e-171 | 487 |
| Msa1402010 | MtrunA17_Chr4g0033731 | 61.538 | 351 | 135 | 0 | 27 | 377 | 1 | 351 | 4.11e-166 | 474 |
| Msa1402010 | MtrunA17_Chr8g0385501 | 38.795 | 415 | 185 | 14 | 27 | 379 | 1 | 408 | 2.70e-62 | 211 |
| Msa1402010 | MtrunA17_Chr3g0131441 | 36.408 | 412 | 196 | 14 | 27 | 379 | 1 | 405 | 5.93e-60 | 204 |
| Msa1402010 | MtrunA17_Chr3g0130481 | 87.755 | 49 | 4 | 2 | 402 | 450 | 30 | 76 | 1.48e-15 | 71.6 |
| Msa1402010 | MtrunA17_Chr3g0130491 | 85.294 | 34 | 5 | 0 | 350 | 383 | 16 | 49 | 1.68e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402010 | AT1G09210.1 | 79.952 | 419 | 82 | 2 | 34 | 450 | 6 | 424 | 0.0 | 623 |
| Msa1402010 | AT1G56340.2 | 84.958 | 359 | 54 | 0 | 33 | 391 | 5 | 363 | 0.0 | 620 |
| Msa1402010 | AT1G56340.1 | 84.533 | 375 | 58 | 0 | 33 | 407 | 5 | 379 | 0.0 | 618 |
| Msa1402010 | AT1G08450.1 | 58.197 | 366 | 153 | 0 | 36 | 401 | 14 | 379 | 3.73e-165 | 472 |
| Msa1402010 | AT1G08450.3 | 52.732 | 366 | 148 | 1 | 36 | 401 | 14 | 354 | 2.04e-143 | 416 |
| Msa1402010 | AT1G08450.2 | 43.243 | 370 | 148 | 3 | 36 | 401 | 14 | 325 | 2.97e-104 | 315 |
| Msa1402010 | AT5G61790.1 | 38.384 | 396 | 185 | 12 | 36 | 379 | 13 | 401 | 1.30e-71 | 235 |
| Msa1402010 | AT5G07340.1 | 37.046 | 413 | 191 | 14 | 45 | 402 | 22 | 420 | 4.64e-57 | 197 |
| Msa1402010 | AT5G07340.2 | 37.592 | 407 | 184 | 15 | 51 | 402 | 37 | 428 | 7.18e-57 | 197 |
Find 154 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCTGGCTTCTTGTCTTC+AGG | 0.169701 | tig0022800:+32326 | None:intergenic |
| TTCCATGGTCCCTTGTACTC+TGG | 0.182700 | tig0022800:+32031 | None:intergenic |
| GTTCATGCTTGACAGAAAAT+TGG | 0.241397 | tig0022800:+32937 | None:intergenic |
| GCTACTTTAAGCTAATTCTT+TGG | 0.257839 | tig0022800:+30743 | None:intergenic |
| TTATCCTTGTTGCTGAATTC+AGG | 0.265305 | tig0022800:+32972 | None:intergenic |
| ATGTACGTCGTCCTCTTTAT+TGG | 0.266525 | tig0022800:+31145 | None:intergenic |
| TTCCACTTTCCACTGTAGTT+GGG | 0.290555 | tig0022800:+31901 | None:intergenic |
| TCAGGATCAGCAACCTCTTT+AGG | 0.312415 | tig0022800:+32199 | None:intergenic |
| TTCCATTGCAATGGCGATTA+GGG | 0.314157 | tig0022800:-34252 | Msa1402010:CDS |
| AGAACGAGAGAGAGAAGGTT+AGG | 0.314409 | tig0022800:+34221 | None:intergenic |
| CTTCCACTTTCCACTGTAGT+TGG | 0.316605 | tig0022800:+31900 | None:intergenic |
| GATGTTGATCAGAAGAAATT+TGG | 0.323562 | tig0022800:-32870 | Msa1402010:CDS |
| GTTGCTAAGTCAGTTGAATT+AGG | 0.324855 | tig0022800:-30547 | Msa1402010:three_prime_UTR |
| CCTCTGGCTTCTTGTCTTCA+GGG | 0.335164 | tig0022800:+32327 | None:intergenic |
| ATTCCATTGCAATGGCGATT+AGG | 0.335328 | tig0022800:-34253 | Msa1402010:CDS |
| CTACTTTAAGCTAATTCTTT+GGG | 0.344293 | tig0022800:+30744 | None:intergenic |
| CAAGGACCCAGAGGCCAAAA+AGG | 0.346525 | tig0022800:-32482 | Msa1402010:intron |
| GGCTTCTTGTCTTCAGGGTC+AGG | 0.351167 | tig0022800:+32332 | None:intergenic |
| AATAAGCTGAAACAGTCTAA+TGG | 0.351518 | tig0022800:+30869 | None:intergenic |
| TCCTTATCATCCCAATCTTC+TGG | 0.358229 | tig0022800:+32362 | None:intergenic |
| GTACTGTAACCACAGATATC+TGG | 0.359127 | tig0022800:+32706 | None:intergenic |
| TGCTGATCCTGATGCCAAAA+AGG | 0.359945 | tig0022800:-32188 | Msa1402010:intron |
| TTTCAACGGTCTGCTTATCT+AGG | 0.361099 | tig0022800:+30926 | None:intergenic |
| TCCATGGTCCCTTGTACTCT+GGG | 0.365819 | tig0022800:+32032 | None:intergenic |
| TCGCAGAAGCGATGGATAGA+AGG | 0.367240 | tig0022800:+34192 | None:intergenic |
| TTAACTTTGCAGGTGAAATC+TGG | 0.376979 | tig0022800:-31617 | Msa1402010:intron |
| TTGTTTGCAGGATGAGCTCT+AGG | 0.388195 | tig0022800:-31043 | Msa1402010:intron |
| ATAAGCTGAAACAGTCTAAT+GGG | 0.401553 | tig0022800:+30870 | None:intergenic |
| TATATATTTACCAGACTTCA+AGG | 0.404034 | tig0022800:-31774 | Msa1402010:intron |
| AGCAACTTGCTTAGCATACT+CGG | 0.412572 | tig0022800:+31559 | None:intergenic |
| GAACATCCTTCTTGATTAAG+TGG | 0.416832 | tig0022800:+32644 | None:intergenic |
| ATGCCAACATACTTCAACTT+GGG | 0.437777 | tig0022800:+31728 | None:intergenic |
| TTGCAATGGCGATTAGGGTT+CGG | 0.442463 | tig0022800:-34247 | Msa1402010:CDS |
| TATCCTTGTTGCTGAATTCA+GGG | 0.448897 | tig0022800:+32973 | None:intergenic |
| ATAAAATCTGTAATCTTCAC+TGG | 0.449401 | tig0022800:+33013 | None:intergenic |
| AAACAAACCTTTGGCTTCCA+TGG | 0.453885 | tig0022800:+32016 | None:intergenic |
| AATACTTACAGCCAGAAGAT+TGG | 0.454631 | tig0022800:-32373 | Msa1402010:intron |
| AGAGTCATGGCTAACTTCAT+TGG | 0.454725 | tig0022800:+31211 | None:intergenic |
| ATACTTACAGCCAGAAGATT+GGG | 0.460743 | tig0022800:-32372 | Msa1402010:intron |
| TAAGTGGTTTGTGTCATTGT+AGG | 0.461585 | tig0022800:+32660 | None:intergenic |
| GCCAGAAGATTGGGATGATA+AGG | 0.462026 | tig0022800:-32363 | Msa1402010:CDS |
| CATTGCCAACCCAGAGTACA+AGG | 0.463149 | tig0022800:-32041 | Msa1402010:CDS |
| TCCACTTTCCACTGTAGTTG+GGG | 0.465244 | tig0022800:+31902 | None:intergenic |
| CTGGTAGTCTTTACTCTGAC+TGG | 0.467326 | tig0022800:-32528 | Msa1402010:CDS |
| CGTTGATTCTGATGCGGAAG+AGG | 0.469655 | tig0022800:-31246 | Msa1402010:CDS |
| TACAACAGTAGCAAGTTAAG+AGG | 0.470157 | tig0022800:-30448 | Msa1402010:three_prime_UTR |
| TTGGGGAAAACATAGATGTC+AGG | 0.470534 | tig0022800:+31746 | None:intergenic |
| AGAAACATGGGGCAAGCAAA+AGG | 0.486201 | tig0022800:-31534 | Msa1402010:CDS |
| AGAAGGATGAGAACTTGGCC+GGG | 0.487362 | tig0022800:-33204 | Msa1402010:CDS |
| ATGAGAACTTGGCCGGGGAG+TGG | 0.492077 | tig0022800:-33198 | Msa1402010:CDS |
| AAAATGCTGTAGGTTGCATC+AGG | 0.493543 | tig0022800:+32574 | None:intergenic |
| CGCAGAAGCGATGGATAGAA+GGG | 0.494372 | tig0022800:+34193 | None:intergenic |
| TCCTCATCATCCCAGTCCTC+AGG | 0.495577 | tig0022800:+32088 | None:intergenic |
| GATAACGTTGAGAAGCAAAC+TGG | 0.496012 | tig0022800:-32547 | Msa1402010:CDS |
| TTCCCCAAGTTGAAGTATGT+TGG | 0.497182 | tig0022800:-31731 | Msa1402010:CDS |
| CTTGTACTCTGGGTTGGCAA+TGG | 0.498402 | tig0022800:+32042 | None:intergenic |
| TAGGGAGTTTGCAAAGCATA+TGG | 0.499383 | tig0022800:-31024 | Msa1402010:three_prime_UTR |
| GAAAACCTTCGCAGAAGCGA+TGG | 0.502839 | tig0022800:+34184 | None:intergenic |
| AGCAAGTTGCTGAAGAAACA+TGG | 0.506018 | tig0022800:-31547 | Msa1402010:CDS |
| TATGTTCTTGCAGGCTGAGA+AGG | 0.508527 | tig0022800:-31432 | Msa1402010:intron |
| TTCTTCGAAGAGCGCTTCGA+AGG | 0.509596 | tig0022800:-34164 | Msa1402010:intron |
| TTCTGATGCGGAAGAGGATG+AGG | 0.510129 | tig0022800:-31240 | Msa1402010:CDS |
| ATGGAAGAAGGATGAGAACT+TGG | 0.515979 | tig0022800:-33209 | Msa1402010:CDS |
| TCTATCCATCGCTTCTGCGA+AGG | 0.516389 | tig0022800:-34189 | Msa1402010:CDS |
| AAGAAGGATGAGAACTTGGC+CGG | 0.516801 | tig0022800:-33205 | Msa1402010:CDS |
| AAAAGATATAACTTCGACTC+CGG | 0.516839 | tig0022800:+30973 | None:intergenic |
| AATGCCAACATACTTCAACT+TGG | 0.516939 | tig0022800:+31727 | None:intergenic |
| GGAACTACACCTCTGGTCAA+TGG | 0.518922 | tig0022800:-33177 | Msa1402010:CDS |
| CTCTTCCGCATCAGAATCAA+CGG | 0.521513 | tig0022800:+31247 | None:intergenic |
| TTCAGGGAACTCAGCAGAGA+TGG | 0.522780 | tig0022800:+32989 | None:intergenic |
| GGTAAAATCTGAATGGAAGA+AGG | 0.524814 | tig0022800:-33221 | Msa1402010:CDS |
| TGGTCCCTTGTACTCTGGGT+TGG | 0.525060 | tig0022800:+32036 | None:intergenic |
| CATTGGGTGAGTGCCACGTA+GGG | 0.525419 | tig0022800:+34449 | None:intergenic |
| GAACGAGAGAGAGAAGGTTA+GGG | 0.525740 | tig0022800:+34222 | None:intergenic |
| AAACCTGGGTTGTCAATCAA+TGG | 0.532475 | tig0022800:+31874 | None:intergenic |
| TGTTGTGTAGCCTGAGGACT+GGG | 0.537049 | tig0022800:-32098 | Msa1402010:intron |
| AACCCTAATCGCCATTGCAA+TGG | 0.540276 | tig0022800:+34250 | None:intergenic |
| CCATTGGGTGAGTGCCACGT+AGG | 0.542796 | tig0022800:+34448 | None:intergenic |
| TGTGGCAGATTGTGGCCATT+GGG | 0.544843 | tig0022800:+34433 | None:intergenic |
| TCTTCCGCATCAGAATCAAC+GGG | 0.545764 | tig0022800:+31248 | None:intergenic |
| CACAAACCACTTAATCAAGA+AGG | 0.545807 | tig0022800:-32650 | Msa1402010:CDS |
| GGGGAGTGGAACTACACCTC+TGG | 0.546989 | tig0022800:-33184 | Msa1402010:CDS |
| ATGTGGCAGATTGTGGCCAT+TGG | 0.547859 | tig0022800:+34432 | None:intergenic |
| GCAACTTGCTTAGCATACTC+GGG | 0.550973 | tig0022800:+31560 | None:intergenic |
| GAATTAGCTTAAAGTAGCTA+TGG | 0.551620 | tig0022800:-30738 | Msa1402010:three_prime_UTR |
| CTAAAGATGGATGGGAAAGC+CGG | 0.553813 | tig0022800:-33246 | Msa1402010:intron |
| GCCGGTGGGTAAAATCTGAA+TGG | 0.553831 | tig0022800:-33228 | Msa1402010:CDS |
| GTTATCAATCAAAATGCTGT+AGG | 0.554637 | tig0022800:+32564 | None:intergenic |
| TGTTTGCAGGATGAGCTCTA+GGG | 0.555016 | tig0022800:-31042 | Msa1402010:intron |
| TGTTGAATGCTAAAGATGGA+TGG | 0.555665 | tig0022800:-33255 | Msa1402010:intron |
| ACCCCAACTACAGTGGAAAG+TGG | 0.558201 | tig0022800:-31903 | Msa1402010:CDS |
| TTGTTGTGTAGCCTGAGGAC+TGG | 0.566755 | tig0022800:-32099 | Msa1402010:intron |
| CAGCGATGAAACCAATAAAG+AGG | 0.572191 | tig0022800:-31156 | Msa1402010:CDS |
| CTTAGCATACTCGGGATCAT+CGG | 0.572247 | tig0022800:+31568 | None:intergenic |
| ACGTAGGGGAAGATTGTCAT+TGG | 0.573473 | tig0022800:+34464 | None:intergenic |
| AGAAAAGAACGAGAGAGAGA+AGG | 0.573982 | tig0022800:+34216 | None:intergenic |
| TGACTCTGATGATGAGTCAA+AGG | 0.575775 | tig0022800:-31195 | Msa1402010:CDS |
| ATACGATGACATTCCTAAAG+AGG | 0.576967 | tig0022800:-32212 | Msa1402010:CDS |
| GATATTATAAATCACCTGTA+GGG | 0.577404 | tig0022800:+32837 | None:intergenic |
| TCTCCCACCAAAGAAAATCA+AGG | 0.577520 | tig0022800:-32500 | Msa1402010:CDS |
| TTGGCGGTGATACTCCCTAC+AGG | 0.578535 | tig0022800:-32851 | Msa1402010:intron |
| GTTGAATGCTAAAGATGGAT+GGG | 0.579079 | tig0022800:-33254 | Msa1402010:intron |
| CAGAAACTTGACTGTGGTGG+TGG | 0.579680 | tig0022800:-32915 | Msa1402010:CDS |
| GTTGATCAGAAGAAATTTGG+CGG | 0.581881 | tig0022800:-32867 | Msa1402010:CDS |
| GGAATATTTCCAGCTAGCAA+TGG | 0.582398 | tig0022800:-30500 | Msa1402010:three_prime_UTR |
| AGAGGTGTAGTTCCACTCCC+CGG | 0.582515 | tig0022800:+33186 | None:intergenic |
| AACTCATTGTCAGGAAACAA+AGG | 0.583402 | tig0022800:-31276 | Msa1402010:intron |
| AGCTGAGAAGAAGAAAGAAG+AGG | 0.584374 | tig0022800:-31396 | Msa1402010:CDS |
| GGTTACATGAAGTTGCTTAG+CGG | 0.587170 | tig0022800:-32894 | Msa1402010:CDS |
| GCAAGTTGCTGAAGAAACAT+GGG | 0.587236 | tig0022800:-31546 | Msa1402010:CDS |
| TGTTTGGTTAAATCATAACA+TGG | 0.587263 | tig0022800:+30641 | None:intergenic |
| TGCTGTAGGTTGCATCAGGA+CGG | 0.587388 | tig0022800:+32578 | None:intergenic |
| GATGAGTCAAAGGCAGAAGC+TGG | 0.589511 | tig0022800:-31185 | Msa1402010:CDS |
| GACTGGGATGATGAGGAAGA+TGG | 0.589626 | tig0022800:-32082 | Msa1402010:CDS |
| AGCGAGCGATTCCATTGCAA+TGG | 0.589635 | tig0022800:-34261 | Msa1402010:CDS |
| TGTTGGCATTGAATTGTGGC+AGG | 0.591537 | tig0022800:-31714 | Msa1402010:intron |
| GAAGGATGAGAACTTGGCCG+GGG | 0.593588 | tig0022800:-33203 | Msa1402010:CDS |
| GGACAATATGTGGCAGATTG+TGG | 0.594348 | tig0022800:+34425 | None:intergenic |
| TTGACTCATCATCAGAGTCA+TGG | 0.601599 | tig0022800:+31198 | None:intergenic |
| ACGATTTACAGATTCATGAT+CGG | 0.602315 | tig0022800:+30780 | None:intergenic |
| CCTACGTGGCACTCACCCAA+TGG | 0.602812 | tig0022800:-34448 | Msa1402010:CDS |
| TACTCTGGGTTGGCAATGGT+AGG | 0.604644 | tig0022800:+32046 | None:intergenic |
| TACACCTCTGGTCAATGGAA+TGG | 0.606107 | tig0022800:-33172 | Msa1402010:CDS |
| TGCCAACATACTTCAACTTG+GGG | 0.607807 | tig0022800:+31729 | None:intergenic |
| AAGATGGATGGGAAAGCCGG+TGG | 0.610833 | tig0022800:-33243 | Msa1402010:CDS |
| TTGCTTACGTGGACAATATG+TGG | 0.610903 | tig0022800:+34415 | None:intergenic |
| TGCAAAGCATATGGCATATG+CGG | 0.612393 | tig0022800:-31015 | Msa1402010:three_prime_UTR |
| TGAGAAGAAGAAAGAAGAGG+AGG | 0.621039 | tig0022800:-31393 | Msa1402010:intron |
| GCCTGAGGACTGGGATGATG+AGG | 0.621427 | tig0022800:-32089 | Msa1402010:CDS |
| CAACTACAGTGGAAAGTGGA+AGG | 0.622242 | tig0022800:-31899 | Msa1402010:CDS |
| TGGGGAAAACATAGATGTCA+GGG | 0.628802 | tig0022800:+31747 | None:intergenic |
| ATGTGTAAACATGAGTAAGC+TGG | 0.631281 | tig0022800:+32608 | None:intergenic |
| ATCAAGAACCCCAACTACAG+TGG | 0.637028 | tig0022800:-31910 | Msa1402010:CDS |
| ACCCAGAGTACAAGGGACCA+TGG | 0.641246 | tig0022800:-32033 | Msa1402010:CDS |
| GTAAGCTGGTCAGTCTCACA+AGG | 0.646980 | tig0022800:+32622 | None:intergenic |
| AGTATGTTGGCATTGAATTG+TGG | 0.647006 | tig0022800:-31718 | Msa1402010:CDS |
| ATGATGAGGAAGATGGTGAG+TGG | 0.647034 | tig0022800:-32075 | Msa1402010:CDS |
| AATGGTGACGCTAATGACAA+AGG | 0.650029 | tig0022800:-33154 | Msa1402010:intron |
| ATGTTTGGTCCAGATATCTG+TGG | 0.653875 | tig0022800:-32715 | Msa1402010:CDS |
| CAAGGGACCATGGAAGCCAA+AGG | 0.658097 | tig0022800:-32023 | Msa1402010:intron |
| TAATTCAACTGACTTAGCAA+CGG | 0.662594 | tig0022800:+30549 | None:intergenic |
| TGATCCCGTTGATTCTGATG+CGG | 0.665412 | tig0022800:-31252 | Msa1402010:CDS |
| ATTGGGTGAGTGCCACGTAG+GGG | 0.665789 | tig0022800:+34450 | None:intergenic |
| GCACCATTGATTGACAACCC+AGG | 0.669589 | tig0022800:-31877 | Msa1402010:intron |
| AAAGAAAATCAAGGACCCAG+AGG | 0.673165 | tig0022800:-32491 | Msa1402010:CDS |
| GTTCCCTGAATTCAGCAACA+AGG | 0.674436 | tig0022800:-32976 | Msa1402010:CDS |
| AGATGGATGGGAAAGCCGGT+GGG | 0.676998 | tig0022800:-33242 | Msa1402010:CDS |
| CCCTGAAGACAAGAAGCCAG+AGG | 0.683823 | tig0022800:-32327 | Msa1402010:intron |
| CAAGTTGCTGAAGAAACATG+GGG | 0.696192 | tig0022800:-31545 | Msa1402010:CDS |
| GTCACCATTCCATTGACCAG+AGG | 0.697163 | tig0022800:+33168 | None:intergenic |
| AATGACAATCTTCCCCTACG+TGG | 0.721639 | tig0022800:-34462 | Msa1402010:CDS |
| ATTGCCAACCCAGAGTACAA+GGG | 0.731176 | tig0022800:-32040 | Msa1402010:CDS |
| GAACAGAAACTTGACTGTGG+TGG | 0.776860 | tig0022800:-32918 | Msa1402010:CDS |
| CATGAACAGAAACTTGACTG+TGG | 0.796573 | tig0022800:-32921 | Msa1402010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATATTTGATTTTTTTCAA+AGG | - | tig0022800:34383-34402 | Msa1402010:intron | 15.0% |
| !! | ATGAAATGAAAAAAGAGATA+TGG | + | tig0022800:30780-30799 | None:intergenic | 20.0% |
| !! | ACATTCATGTTTGTAATTTA+TGG | - | tig0022800:30832-30851 | Msa1402010:three_prime_UTR | 20.0% |
| !! | AATTTGCAGTGATAATATTA+TGG | + | tig0022800:31485-31504 | None:intergenic | 20.0% |
| !! | TCAAAACACAAGTTAAAAAA+GGG | + | tig0022800:31622-31641 | None:intergenic | 20.0% |
| !! | ATCAAAACACAAGTTAAAAA+AGG | + | tig0022800:31623-31642 | None:intergenic | 20.0% |
| !! | ATGATTAGAAATTAGAAAGT+AGG | + | tig0022800:32505-32524 | None:intergenic | 20.0% |
| !! | ATAATATAATGAGAGATGAA+TGG | + | tig0022800:32765-32784 | None:intergenic | 20.0% |
| !! | ATTCATCTCTCATTATATTA+TGG | - | tig0022800:32764-32783 | Msa1402010:intron | 20.0% |
| !! | TGATATATTGCAATATGTTT+AGG | - | tig0022800:32927-32946 | Msa1402010:CDS | 20.0% |
| !!! | TTGATTTGTTTACTAACTTT+TGG | - | tig0022800:32952-32971 | Msa1402010:CDS | 20.0% |
| ! | TGAAAAAAGAGATATGGAAA+TGG | + | tig0022800:30774-30793 | None:intergenic | 25.0% |
| !!! | ATGTTGATTTGAAAACGATT+TGG | - | tig0022800:31029-31048 | Msa1402010:exon | 25.0% |
| ! | GGTTAATTAATCTTTGATCA+TGG | - | tig0022800:31063-31082 | Msa1402010:intron | 25.0% |
| ! | GGATTGTAAACAAAATGAAA+TGG | + | tig0022800:31135-31154 | None:intergenic | 25.0% |
| !! | CAATCCTTTTAATCTCATTT+CGG | - | tig0022800:31149-31168 | Msa1402010:CDS | 25.0% |
| ! | AAAACTACCATTCTTTAATC+CGG | + | tig0022800:31208-31227 | None:intergenic | 25.0% |
| ! | AATTTGATCTAATCCAAACA+AGG | - | tig0022800:31459-31478 | Msa1402010:intron | 25.0% |
| ! | ATACTAAATAAACTCGAACA+TGG | + | tig0022800:31554-31573 | None:intergenic | 25.0% |
| ! | AAAAAGGGGAAAATATTGAT+TGG | + | tig0022800:31607-31626 | None:intergenic | 25.0% |
| ! | CAAAACACAAGTTAAAAAAG+GGG | + | tig0022800:31621-31640 | None:intergenic | 25.0% |
| ! | ATTATGTTGAATGCTAAAGA+TGG | - | tig0022800:31645-31664 | Msa1402010:intron | 25.0% |
| ! | ATAAAATCTGTAATCTTCAC+TGG | + | tig0022800:31894-31913 | None:intergenic | 25.0% |
| ! | GATATTATAAATCACCTGTA+GGG | + | tig0022800:32070-32089 | None:intergenic | 25.0% |
| ! | TGAAAGAGATAAAACTAGAA+GGG | + | tig0022800:32092-32111 | None:intergenic | 25.0% |
| !! | TAATTTTGCAGTATCATGTT+TGG | - | tig0022800:32174-32193 | Msa1402010:intron | 25.0% |
| ! | TACATAAAACAAAAGGAATC+TGG | + | tig0022800:32480-32499 | None:intergenic | 25.0% |
| ! | GTAGGAATACATAAAACAAA+AGG | + | tig0022800:32487-32506 | None:intergenic | 25.0% |
| ! | ATACAAAAGCTTAGAGTAAA+AGG | + | tig0022800:32608-32627 | None:intergenic | 25.0% |
| ! | TATCTAATACACAACATAGT+AGG | + | tig0022800:32644-32663 | None:intergenic | 25.0% |
| ! | TATATATTTACCAGACTTCA+AGG | - | tig0022800:33130-33149 | Msa1402010:intron | 25.0% |
| !! | TTTCTATTCACTCAATCTTT+TGG | - | tig0022800:33404-33423 | Msa1402010:intron | 25.0% |
| !!! | CCATTAAGTTTTATTCCTTA+AGG | + | tig0022800:33430-33449 | None:intergenic | 25.0% |
| ! | CCTTAAGGAATAAAACTTAA+TGG | - | tig0022800:33427-33446 | Msa1402010:intron | 25.0% |
| ! | CTACTTTAAGCTAATTCTTT+GGG | + | tig0022800:34163-34182 | None:intergenic | 25.0% |
| ! | TGTTTGGTTAAATCATAACA+TGG | + | tig0022800:34266-34285 | None:intergenic | 25.0% |
| !!! | ATGATTTTGTTTACGTTGTT+TGG | + | tig0022800:34282-34301 | None:intergenic | 25.0% |
| ! | TGTTTGGTTAAATCATAACA+TGG | + | tig0022800:34266-34285 | None:intergenic | 25.0% |
| ! | GGTAAATTTGGTAATTTACG+TGG | + | tig0022800:30518-30537 | None:intergenic | 30.0% |
| AATTACACAACAATGCAGAA+AGG | + | tig0022800:30870-30889 | None:intergenic | 30.0% | |
| ! | TGTGATTGAATTTTCACGAT+CGG | - | tig0022800:30897-30916 | Msa1402010:three_prime_UTR | 30.0% |
| TCTTCCGAAATGAGATTAAA+AGG | + | tig0022800:31156-31175 | None:intergenic | 30.0% | |
| ACAAACAGTTCATTAAAAGC+TGG | + | tig0022800:31303-31322 | None:intergenic | 30.0% | |
| !! | GATAATATTATGGCCTTGTT+TGG | + | tig0022800:31475-31494 | None:intergenic | 30.0% |
| !!! | TTTCTTTCCTTTTTTCGTTG+AGG | - | tig0022800:31523-31542 | Msa1402010:intron | 30.0% |
| TGAATTGAAAGATGATACTG+AGG | - | tig0022800:31827-31846 | Msa1402010:intron | 30.0% | |
| GATGTTGATCAGAAGAAATT+TGG | - | tig0022800:32034-32053 | Msa1402010:CDS | 30.0% | |
| GGATATTATAAATCACCTGT+AGG | + | tig0022800:32071-32090 | None:intergenic | 30.0% | |
| GTGAAAGAGATAAAACTAGA+AGG | + | tig0022800:32093-32112 | None:intergenic | 30.0% | |
| GTTATCAATCAAAATGCTGT+AGG | + | tig0022800:32343-32362 | None:intergenic | 30.0% | |
| ACTATAAACGTAGGTGAAAA+GGG | + | tig0022800:32450-32469 | None:intergenic | 30.0% | |
| AACTATAAACGTAGGTGAAA+AGG | + | tig0022800:32451-32470 | None:intergenic | 30.0% | |
| GGCAATTAAACTATAAACGT+AGG | + | tig0022800:32459-32478 | None:intergenic | 30.0% | |
| TCTGACATTCTGTATTTGTA+GGG | - | tig0022800:32669-32688 | Msa1402010:CDS | 30.0% | |
| !!! | TAACTTTTGGTGTTACATCT+TGG | - | tig0022800:32965-32984 | Msa1402010:CDS | 30.0% |
| ! | TTAATGGATGTTGATCTCTT+TGG | - | tig0022800:33443-33462 | Msa1402010:intron | 30.0% |
| !!! | AGTGAGCAAAAGTTTTATTC+CGG | - | tig0022800:33912-33931 | Msa1402010:intron | 30.0% |
| AAAAGATATAACTTCGACTC+CGG | + | tig0022800:33934-33953 | None:intergenic | 30.0% | |
| ATAAGCTGAAACAGTCTAAT+GGG | + | tig0022800:34037-34056 | None:intergenic | 30.0% | |
| AATAAGCTGAAACAGTCTAA+TGG | + | tig0022800:34038-34057 | None:intergenic | 30.0% | |
| ! | AACAGACAACAATGTCTTTT+TGG | - | tig0022800:34060-34079 | Msa1402010:intron | 30.0% |
| ACGATTTACAGATTCATGAT+CGG | + | tig0022800:34127-34146 | None:intergenic | 30.0% | |
| ! | GCTACTTTAAGCTAATTCTT+TGG | + | tig0022800:34164-34183 | None:intergenic | 30.0% |
| ! | GAATTAGCTTAAAGTAGCTA+TGG | - | tig0022800:34166-34185 | Msa1402010:CDS | 30.0% |
| ! | TAATTCAACTGACTTAGCAA+CGG | + | tig0022800:34358-34377 | None:intergenic | 30.0% |
| ! | ATTGTTTCTTTCAGTGCTGT+GGG | + | tig0022800:30539-30558 | None:intergenic | 35.0% |
| CAAATCAACATCATCACGTT+CGG | + | tig0022800:31020-31039 | None:intergenic | 35.0% | |
| !!! | AACGATTTGGCACGTTTTTT+TGG | - | tig0022800:31042-31061 | Msa1402010:intron | 35.0% |
| TTTGAATTGTGTTGTGTGTC+CGG | - | tig0022800:31186-31205 | Msa1402010:CDS | 35.0% | |
| TTTGTCTCTGTTTGTGTGTA+AGG | - | tig0022800:31246-31265 | Msa1402010:CDS | 35.0% | |
| ATGCTATAAGCTGTGACTTA+CGG | + | tig0022800:31431-31450 | None:intergenic | 35.0% | |
| ! | AAGGGGAAAATATTGATTGG+AGG | + | tig0022800:31604-31623 | None:intergenic | 35.0% |
| TGTTGAATGCTAAAGATGGA+TGG | - | tig0022800:31649-31668 | Msa1402010:intron | 35.0% | |
| GTTGAATGCTAAAGATGGAT+GGG | - | tig0022800:31650-31669 | Msa1402010:intron | 35.0% | |
| GGTAAAATCTGAATGGAAGA+AGG | - | tig0022800:31683-31702 | Msa1402010:intron | 35.0% | |
| !!! | CAACCTTGTTTTATTGTTGC+TGG | - | tig0022800:31795-31814 | Msa1402010:intron | 35.0% |
| ACACCAGCAACAATAAAACA+AGG | + | tig0022800:31801-31820 | None:intergenic | 35.0% | |
| TTGAAAGATGATACTGAGGT+TGG | - | tig0022800:31831-31850 | Msa1402010:intron | 35.0% | |
| CAAATGTTTGATATCTCCAC+AGG | - | tig0022800:31860-31879 | Msa1402010:intron | 35.0% | |
| TATCCTTGTTGCTGAATTCA+GGG | + | tig0022800:31934-31953 | None:intergenic | 35.0% | |
| TTATCCTTGTTGCTGAATTC+AGG | + | tig0022800:31935-31954 | None:intergenic | 35.0% | |
| GTTCATGCTTGACAGAAAAT+TGG | + | tig0022800:31970-31989 | None:intergenic | 35.0% | |
| GTTGATCAGAAGAAATTTGG+CGG | - | tig0022800:32037-32056 | Msa1402010:CDS | 35.0% | |
| !!! | CAGAATAGCGTGTACTTTTT+TGG | + | tig0022800:32223-32242 | None:intergenic | 35.0% |
| ! | TAAGTGGTTTGTGTCATTGT+AGG | + | tig0022800:32247-32266 | None:intergenic | 35.0% |
| CACAAACCACTTAATCAAGA+AGG | - | tig0022800:32254-32273 | Msa1402010:intron | 35.0% | |
| GAACATCCTTCTTGATTAAG+TGG | + | tig0022800:32263-32282 | None:intergenic | 35.0% | |
| ATGTGTAAACATGAGTAAGC+TGG | + | tig0022800:32299-32318 | None:intergenic | 35.0% | |
| AATACTTACAGCCAGAAGAT+TGG | - | tig0022800:32531-32550 | Msa1402010:CDS | 35.0% | |
| ATACTTACAGCCAGAAGATT+GGG | - | tig0022800:32532-32551 | Msa1402010:CDS | 35.0% | |
| !! | AGAGTAAAAGGTATTACCTC+TGG | + | tig0022800:32596-32615 | None:intergenic | 35.0% |
| CTAATACACAACATAGTAGG+TGG | + | tig0022800:32641-32660 | None:intergenic | 35.0% | |
| CTCTGACATTCTGTATTTGT+AGG | - | tig0022800:32668-32687 | Msa1402010:CDS | 35.0% | |
| ATACGATGACATTCCTAAAG+AGG | - | tig0022800:32692-32711 | Msa1402010:CDS | 35.0% | |
| ! | TGGGAAACAACTAACCTTTT+TGG | + | tig0022800:32733-32752 | None:intergenic | 35.0% |
| AATAATTGTTGTGTAGCCTG+AGG | - | tig0022800:32800-32819 | Msa1402010:intron | 35.0% | |
| TTTCCACACAAACAAACCTT+TGG | + | tig0022800:32900-32919 | None:intergenic | 35.0% | |
| TAACTTCAACTGCGAAAACA+AGG | + | tig0022800:33065-33084 | None:intergenic | 35.0% | |
| ATGCCAACATACTTCAACTT+GGG | + | tig0022800:33179-33198 | None:intergenic | 35.0% | |
| AATGCCAACATACTTCAACT+TGG | + | tig0022800:33180-33199 | None:intergenic | 35.0% | |
| ! | AGTATGTTGGCATTGAATTG+TGG | - | tig0022800:33186-33205 | Msa1402010:CDS | 35.0% |
| ACTAAAACGCTCAAATCAAG+TGG | + | tig0022800:33243-33262 | None:intergenic | 35.0% | |
| TTAACTTTGCAGGTGAAATC+TGG | - | tig0022800:33287-33306 | Msa1402010:intron | 35.0% | |
| TGGTGAATATATGTTCTTGC+AGG | - | tig0022800:33463-33482 | Msa1402010:intron | 35.0% | |
| AACTTCCTTAACTCATTGTC+AGG | - | tig0022800:33619-33638 | Msa1402010:intron | 35.0% | |
| TGTTTCCTGACAATGAGTTA+AGG | + | tig0022800:33627-33646 | None:intergenic | 35.0% | |
| AACTCATTGTCAGGAAACAA+AGG | - | tig0022800:33628-33647 | Msa1402010:intron | 35.0% | |
| ! | TTTTCGCTTGCAGTTTTCAA+CGG | + | tig0022800:33995-34014 | None:intergenic | 35.0% |
| !! | ATATTGACTCGTACGTTGTT+TGG | + | tig0022800:34333-34352 | None:intergenic | 35.0% |
| GTTGCTAAGTCAGTTGAATT+AGG | - | tig0022800:34357-34376 | Msa1402010:intron | 35.0% | |
| TAGCAATGGATGAGAAAAAG+TGG | - | tig0022800:34418-34437 | Msa1402010:intron | 35.0% | |
| TACAACAGTAGCAAGTTAAG+AGG | - | tig0022800:34456-34475 | Msa1402010:CDS | 35.0% | |
| TTGCTTACGTGGACAATATG+TGG | + | tig0022800:30492-30511 | None:intergenic | 40.0% | |
| TTCAGTGCTGTGGGTAAATT+TGG | + | tig0022800:30530-30549 | None:intergenic | 40.0% | |
| ! | CATTGTTTCTTTCAGTGCTG+TGG | + | tig0022800:30540-30559 | None:intergenic | 40.0% |
| AATGAGAGTGAGAGCTACTT+TGG | + | tig0022800:30605-30624 | None:intergenic | 40.0% | |
| ATTCCATTGCAATGGCGATT+AGG | - | tig0022800:30651-30670 | Msa1402010:three_prime_UTR | 40.0% | |
| TTCCATTGCAATGGCGATTA+GGG | - | tig0022800:30652-30671 | Msa1402010:three_prime_UTR | 40.0% | |
| AGAAAAGAACGAGAGAGAGA+AGG | + | tig0022800:30691-30710 | None:intergenic | 40.0% | |
| TGTGTGTCCGGATTAAAGAA+TGG | - | tig0022800:31198-31217 | Msa1402010:CDS | 40.0% | |
| GGACTATCCTCAACGAAAAA+AGG | + | tig0022800:31533-31552 | None:intergenic | 40.0% | |
| ! | TCCATTCAGATTTTACCCAC+CGG | + | tig0022800:31680-31699 | None:intergenic | 40.0% |
| ATGGAAGAAGGATGAGAACT+TGG | - | tig0022800:31695-31714 | Msa1402010:intron | 40.0% | |
| ! | AATGGTGACGCTAATGACAA+AGG | - | tig0022800:31750-31769 | Msa1402010:CDS | 40.0% |
| !! | TTCACTGGTTTGAATACCTG+TGG | + | tig0022800:31879-31898 | None:intergenic | 40.0% |
| CATGAACAGAAACTTGACTG+TGG | - | tig0022800:31983-32002 | Msa1402010:intron | 40.0% | |
| GGTTACATGAAGTTGCTTAG+CGG | - | tig0022800:32010-32029 | Msa1402010:intron | 40.0% | |
| AGCTAACATGTGTCATGTCT+TGG | - | tig0022800:32113-32132 | Msa1402010:intron | 40.0% | |
| ATGTTTGGTCCAGATATCTG+TGG | - | tig0022800:32189-32208 | Msa1402010:CDS | 40.0% | |
| GTACTGTAACCACAGATATC+TGG | + | tig0022800:32201-32220 | None:intergenic | 40.0% | |
| AAAATGCTGTAGGTTGCATC+AGG | + | tig0022800:32333-32352 | None:intergenic | 40.0% | |
| GATAACGTTGAGAAGCAAAC+TGG | - | tig0022800:32357-32376 | Msa1402010:CDS | 40.0% | |
| TCTCCCACCAAAGAAAATCA+AGG | - | tig0022800:32404-32423 | Msa1402010:intron | 40.0% | |
| ! | GGTCCTTGATTTTCTTTGGT+GGG | + | tig0022800:32410-32429 | None:intergenic | 40.0% |
| ! | TCTGGGTCCTTGATTTTCTT+TGG | + | tig0022800:32414-32433 | None:intergenic | 40.0% |
| AAAGAAAATCAAGGACCCAG+AGG | - | tig0022800:32413-32432 | Msa1402010:intron | 40.0% | |
| !!! | AGGTGAAAAGGGTACCTTTT+TGG | + | tig0022800:32439-32458 | None:intergenic | 40.0% |
| TCCTTATCATCCCAATCTTC+TGG | + | tig0022800:32545-32564 | None:intergenic | 40.0% | |
| !! | CAACTAACCTTTTTGGCATC+AGG | + | tig0022800:32726-32745 | None:intergenic | 40.0% |
| AGATGAATGGACACAGCAAT+GGG | + | tig0022800:32752-32771 | None:intergenic | 40.0% | |
| ! | AAACAAACCTTTGGCTTCCA+TGG | + | tig0022800:32891-32910 | None:intergenic | 40.0% |
| ! | AAGCCAAAGGTTTGTTTGTG+TGG | - | tig0022800:32894-32913 | Msa1402010:CDS | 40.0% |
| TTCCACTTTCCACTGTAGTT+GGG | + | tig0022800:33006-33025 | None:intergenic | 40.0% | |
| AAACCTGGGTTGTCAATCAA+TGG | + | tig0022800:33033-33052 | None:intergenic | 40.0% | |
| CAAGGATGAAAAGCAAACCT+GGG | + | tig0022800:33047-33066 | None:intergenic | 40.0% | |
| ACAAGGATGAAAAGCAAACC+TGG | + | tig0022800:33048-33067 | None:intergenic | 40.0% | |
| TGGGGAAAACATAGATGTCA+GGG | + | tig0022800:33160-33179 | None:intergenic | 40.0% | |
| TTGGGGAAAACATAGATGTC+AGG | + | tig0022800:33161-33180 | None:intergenic | 40.0% | |
| ! | TTCCCCAAGTTGAAGTATGT+TGG | - | tig0022800:33173-33192 | Msa1402010:CDS | 40.0% |
| TGCCAACATACTTCAACTTG+GGG | + | tig0022800:33178-33197 | None:intergenic | 40.0% | |
| ! | TGCAAAGTTAAGTAGCTTGC+TGG | + | tig0022800:33278-33297 | None:intergenic | 40.0% |
| AGCAAGCTACTTAACTTTGC+AGG | - | tig0022800:33277-33296 | Msa1402010:intron | 40.0% | |
| ! | AGCAACTTGCTTAGCATACT+CGG | + | tig0022800:33348-33367 | None:intergenic | 40.0% |
| AGCAAGTTGCTGAAGAAACA+TGG | - | tig0022800:33357-33376 | Msa1402010:intron | 40.0% | |
| GCAAGTTGCTGAAGAAACAT+GGG | - | tig0022800:33358-33377 | Msa1402010:intron | 40.0% | |
| CAAGTTGCTGAAGAAACATG+GGG | - | tig0022800:33359-33378 | Msa1402010:intron | 40.0% | |
| !!! | CACTCAATCTTTTGGCCTTA+AGG | - | tig0022800:33412-33431 | Msa1402010:intron | 40.0% |
| AGCTGAGAAGAAGAAAGAAG+AGG | - | tig0022800:33508-33527 | Msa1402010:intron | 40.0% | |
| TGAGAAGAAGAAAGAAGAGG+AGG | - | tig0022800:33511-33530 | Msa1402010:intron | 40.0% | |
| AGAGTCATGGCTAACTTCAT+TGG | + | tig0022800:33696-33715 | None:intergenic | 40.0% | |
| TTGACTCATCATCAGAGTCA+TGG | + | tig0022800:33709-33728 | None:intergenic | 40.0% | |
| ! | TGACTCTGATGATGAGTCAA+AGG | - | tig0022800:33709-33728 | Msa1402010:intron | 40.0% |
| CAGCGATGAAACCAATAAAG+AGG | - | tig0022800:33748-33767 | Msa1402010:intron | 40.0% | |
| ATGTACGTCGTCCTCTTTAT+TGG | + | tig0022800:33762-33781 | None:intergenic | 40.0% | |
| TCATCCTGCAAACAAAAGGA+GGG | + | tig0022800:33856-33875 | None:intergenic | 40.0% | |
| TAGGGAGTTTGCAAAGCATA+TGG | - | tig0022800:33880-33899 | Msa1402010:intron | 40.0% | |
| TGCAAAGCATATGGCATATG+CGG | - | tig0022800:33889-33908 | Msa1402010:intron | 40.0% | |
| TTTCAACGGTCTGCTTATCT+AGG | + | tig0022800:33981-34000 | None:intergenic | 40.0% | |
| GGAATATTTCCAGCTAGCAA+TGG | - | tig0022800:34404-34423 | Msa1402010:intron | 40.0% | |
| ! | TTTTCTCATCCATTGCTAGC+TGG | + | tig0022800:34416-34435 | None:intergenic | 40.0% |
| GGACAATATGTGGCAGATTG+TGG | + | tig0022800:30482-30501 | None:intergenic | 45.0% | |
| ! | TTACGTGGATGTTGCTTACG+TGG | + | tig0022800:30503-30522 | None:intergenic | 45.0% |
| AACCCTAATCGCCATTGCAA+TGG | + | tig0022800:30657-30676 | None:intergenic | 45.0% | |
| TTGCAATGGCGATTAGGGTT+CGG | - | tig0022800:30657-30676 | Msa1402010:three_prime_UTR | 45.0% | |
| GAACGAGAGAGAGAAGGTTA+GGG | + | tig0022800:30685-30704 | None:intergenic | 45.0% | |
| AGAACGAGAGAGAGAAGGTT+AGG | + | tig0022800:30686-30705 | None:intergenic | 45.0% | |
| TGATCTGAACTGTCGTTGTC+TGG | - | tig0022800:30972-30991 | Msa1402010:three_prime_UTR | 45.0% | |
| TAAGCACCTGTGAGACTCTA+TGG | - | tig0022800:31352-31371 | Msa1402010:intron | 45.0% | |
| GTTCTTCCATAGAGTCTCAC+AGG | + | tig0022800:31361-31380 | None:intergenic | 45.0% | |
| CTAAAGATGGATGGGAAAGC+CGG | - | tig0022800:31658-31677 | Msa1402010:intron | 45.0% | |
| AAGAAGGATGAGAACTTGGC+CGG | - | tig0022800:31699-31718 | Msa1402010:intron | 45.0% | |
| TACACCTCTGGTCAATGGAA+TGG | - | tig0022800:31732-31751 | Msa1402010:CDS | 45.0% | |
| GTTCCCTGAATTCAGCAACA+AGG | - | tig0022800:31928-31947 | Msa1402010:intron | 45.0% | |
| GAACAGAAACTTGACTGTGG+TGG | - | tig0022800:31986-32005 | Msa1402010:intron | 45.0% | |
| CTGGTAGTCTTTACTCTGAC+TGG | - | tig0022800:32376-32395 | Msa1402010:intron | 45.0% | |
| ! | GGGTCCTTGATTTTCTTTGG+TGG | + | tig0022800:32411-32430 | None:intergenic | 45.0% |
| GCCAGAAGATTGGGATGATA+AGG | - | tig0022800:32541-32560 | Msa1402010:CDS | 45.0% | |
| TCAGGATCAGCAACCTCTTT+AGG | + | tig0022800:32708-32727 | None:intergenic | 45.0% | |
| TGCTGATCCTGATGCCAAAA+AGG | - | tig0022800:32716-32735 | Msa1402010:CDS | 45.0% | |
| GAGATGAATGGACACAGCAA+TGG | + | tig0022800:32753-32772 | None:intergenic | 45.0% | |
| ATGATGAGGAAGATGGTGAG+TGG | - | tig0022800:32829-32848 | Msa1402010:intron | 45.0% | |
| ATTGCCAACCCAGAGTACAA+GGG | - | tig0022800:32864-32883 | Msa1402010:CDS | 45.0% | |
| ATCAAGAACCCCAACTACAG+TGG | - | tig0022800:32994-33013 | Msa1402010:CDS | 45.0% | |
| TCCACTTTCCACTGTAGTTG+GGG | + | tig0022800:33005-33024 | None:intergenic | 45.0% | |
| CTTCCACTTTCCACTGTAGT+TGG | + | tig0022800:33007-33026 | None:intergenic | 45.0% | |
| CAACTACAGTGGAAAGTGGA+AGG | - | tig0022800:33005-33024 | Msa1402010:CDS | 45.0% | |
| ! | TGTTGGCATTGAATTGTGGC+AGG | - | tig0022800:33190-33209 | Msa1402010:CDS | 45.0% |
| CTTAGCATACTCGGGATCAT+CGG | + | tig0022800:33339-33358 | None:intergenic | 45.0% | |
| ! | GCAACTTGCTTAGCATACTC+GGG | + | tig0022800:33347-33366 | None:intergenic | 45.0% |
| AGAAACATGGGGCAAGCAAA+AGG | - | tig0022800:33370-33389 | Msa1402010:intron | 45.0% | |
| TATGTTCTTGCAGGCTGAGA+AGG | - | tig0022800:33472-33491 | Msa1402010:intron | 45.0% | |
| !! | TGATCCCGTTGATTCTGATG+CGG | - | tig0022800:33652-33671 | Msa1402010:intron | 45.0% |
| TCTTCCGCATCAGAATCAAC+GGG | + | tig0022800:33659-33678 | None:intergenic | 45.0% | |
| CTCTTCCGCATCAGAATCAA+CGG | + | tig0022800:33660-33679 | None:intergenic | 45.0% | |
| !! | TTTCCCCTCCTTTTGTTTGC+AGG | - | tig0022800:33849-33868 | Msa1402010:intron | 45.0% |
| CATCCTGCAAACAAAAGGAG+GGG | + | tig0022800:33855-33874 | None:intergenic | 45.0% | |
| CTCATCCTGCAAACAAAAGG+AGG | + | tig0022800:33857-33876 | None:intergenic | 45.0% | |
| GAGCTCATCCTGCAAACAAA+AGG | + | tig0022800:33860-33879 | None:intergenic | 45.0% | |
| TTGTTTGCAGGATGAGCTCT+AGG | - | tig0022800:33861-33880 | Msa1402010:intron | 45.0% | |
| TGTTTGCAGGATGAGCTCTA+GGG | - | tig0022800:33862-33881 | Msa1402010:intron | 45.0% | |
| TGTGGCAGATTGTGGCCATT+GGG | + | tig0022800:30474-30493 | None:intergenic | 50.0% | |
| ATGTGGCAGATTGTGGCCAT+TGG | + | tig0022800:30475-30494 | None:intergenic | 50.0% | |
| AGCGAGCGATTCCATTGCAA+TGG | - | tig0022800:30643-30662 | Msa1402010:three_prime_UTR | 50.0% | |
| CGCAGAAGCGATGGATAGAA+GGG | + | tig0022800:30714-30733 | None:intergenic | 50.0% | |
| TCGCAGAAGCGATGGATAGA+AGG | + | tig0022800:30715-30734 | None:intergenic | 50.0% | |
| TCTATCCATCGCTTCTGCGA+AGG | - | tig0022800:30715-30734 | Msa1402010:three_prime_UTR | 50.0% | |
| GAAAACCTTCGCAGAAGCGA+TGG | + | tig0022800:30723-30742 | None:intergenic | 50.0% | |
| !! | TTCTTCGAAGAGCGCTTCGA+AGG | - | tig0022800:30740-30759 | Msa1402010:three_prime_UTR | 50.0% |
| GCCGGTGGGTAAAATCTGAA+TGG | - | tig0022800:31676-31695 | Msa1402010:intron | 50.0% | |
| AGAAGGATGAGAACTTGGCC+GGG | - | tig0022800:31700-31719 | Msa1402010:intron | 50.0% | |
| GGAACTACACCTCTGGTCAA+TGG | - | tig0022800:31727-31746 | Msa1402010:CDS | 50.0% | |
| GTCACCATTCCATTGACCAG+AGG | + | tig0022800:31739-31758 | None:intergenic | 50.0% | |
| TTCAGGGAACTCAGCAGAGA+TGG | + | tig0022800:31918-31937 | None:intergenic | 50.0% | |
| CAGAAACTTGACTGTGGTGG+TGG | - | tig0022800:31989-32008 | Msa1402010:intron | 50.0% | |
| GTAAGCTGGTCAGTCTCACA+AGG | + | tig0022800:32285-32304 | None:intergenic | 50.0% | |
| TGCTGTAGGTTGCATCAGGA+CGG | + | tig0022800:32329-32348 | None:intergenic | 50.0% | |
| !! | AGGGTACCTTTTTGGCCTCT+GGG | + | tig0022800:32431-32450 | None:intergenic | 50.0% |
| !!! | AAGGGTACCTTTTTGGCCTC+TGG | + | tig0022800:32432-32451 | None:intergenic | 50.0% |
| ! | CCTCTGGCTTCTTGTCTTCA+GGG | + | tig0022800:32580-32599 | None:intergenic | 50.0% |
| ! | ACCTCTGGCTTCTTGTCTTC+AGG | + | tig0022800:32581-32600 | None:intergenic | 50.0% |
| TTGTTGTGTAGCCTGAGGAC+TGG | - | tig0022800:32805-32824 | Msa1402010:intron | 50.0% | |
| TGTTGTGTAGCCTGAGGACT+GGG | - | tig0022800:32806-32825 | Msa1402010:intron | 50.0% | |
| GACTGGGATGATGAGGAAGA+TGG | - | tig0022800:32822-32841 | Msa1402010:intron | 50.0% | |
| !! | TACTCTGGGTTGGCAATGGT+AGG | + | tig0022800:32861-32880 | None:intergenic | 50.0% |
| !! | CTTGTACTCTGGGTTGGCAA+TGG | + | tig0022800:32865-32884 | None:intergenic | 50.0% |
| CATTGCCAACCCAGAGTACA+AGG | - | tig0022800:32863-32882 | Msa1402010:CDS | 50.0% | |
| TCCATGGTCCCTTGTACTCT+GGG | + | tig0022800:32875-32894 | None:intergenic | 50.0% | |
| TTCCATGGTCCCTTGTACTC+TGG | + | tig0022800:32876-32895 | None:intergenic | 50.0% | |
| ACCCCAACTACAGTGGAAAG+TGG | - | tig0022800:33001-33020 | Msa1402010:CDS | 50.0% | |
| ! | GCACCATTGATTGACAACCC+AGG | - | tig0022800:33027-33046 | Msa1402010:intron | 50.0% |
| !! | CGTTGATTCTGATGCGGAAG+AGG | - | tig0022800:33658-33677 | Msa1402010:intron | 50.0% |
| TTCTGATGCGGAAGAGGATG+AGG | - | tig0022800:33664-33683 | Msa1402010:intron | 50.0% | |
| GATGAGTCAAAGGCAGAAGC+TGG | - | tig0022800:33719-33738 | Msa1402010:intron | 50.0% | |
| ATTGGGTGAGTGCCACGTAG+GGG | + | tig0022800:30457-30476 | None:intergenic | 55.0% | |
| CATTGGGTGAGTGCCACGTA+GGG | + | tig0022800:30458-30477 | None:intergenic | 55.0% | |
| AAGATGGATGGGAAAGCCGG+TGG | - | tig0022800:31661-31680 | Msa1402010:intron | 55.0% | |
| AGATGGATGGGAAAGCCGGT+GGG | - | tig0022800:31662-31681 | Msa1402010:intron | 55.0% | |
| GAAGGATGAGAACTTGGCCG+GGG | - | tig0022800:31701-31720 | Msa1402010:intron | 55.0% | |
| ! | AGAGGTGTAGTTCCACTCCC+CGG | + | tig0022800:31721-31740 | None:intergenic | 55.0% |
| TTGGCGGTGATACTCCCTAC+AGG | - | tig0022800:32053-32072 | Msa1402010:CDS | 55.0% | |
| CAAGGACCCAGAGGCCAAAA+AGG | - | tig0022800:32422-32441 | Msa1402010:intron | 55.0% | |
| GGCTTCTTGTCTTCAGGGTC+AGG | + | tig0022800:32575-32594 | None:intergenic | 55.0% | |
| CCCTGAAGACAAGAAGCCAG+AGG | - | tig0022800:32577-32596 | Msa1402010:CDS | 55.0% | |
| TCCTCATCATCCCAGTCCTC+AGG | + | tig0022800:32819-32838 | None:intergenic | 55.0% | |
| TGGTCCCTTGTACTCTGGGT+TGG | + | tig0022800:32871-32890 | None:intergenic | 55.0% | |
| ACCCAGAGTACAAGGGACCA+TGG | - | tig0022800:32871-32890 | Msa1402010:CDS | 55.0% | |
| CAAGGGACCATGGAAGCCAA+AGG | - | tig0022800:32881-32900 | Msa1402010:CDS | 55.0% | |
| TCAGGGTCGTCCTTGAAGTC+TGG | + | tig0022800:33143-33162 | None:intergenic | 55.0% | |
| CCATTGGGTGAGTGCCACGT+AGG | + | tig0022800:30459-30478 | None:intergenic | 60.0% | |
| CCTACGTGGCACTCACCCAA+TGG | - | tig0022800:30456-30475 | Msa1402010:three_prime_UTR | 60.0% | |
| ATGAGAACTTGGCCGGGGAG+TGG | - | tig0022800:31706-31725 | Msa1402010:intron | 60.0% | |
| GGGGAGTGGAACTACACCTC+TGG | - | tig0022800:31720-31739 | Msa1402010:CDS | 60.0% | |
| GCCTGAGGACTGGGATGATG+AGG | - | tig0022800:32815-32834 | Msa1402010:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022800 | gene | 30443 | 34483 | 30443 | ID=Msa1402010;Name=Msa1402010 |
| tig0022800 | mRNA | 30443 | 34483 | 30443 | ID=Msa1402010-mRNA-1;Parent=Msa1402010;Name=Msa1402010-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.92|0.86|1|0.92|0.86|15|550|450 |
| tig0022800 | exon | 30443 | 30587 | 30443 | ID=Msa1402010-mRNA-1:exon:18706;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 30639 | 31055 | 30639 | ID=Msa1402010-mRNA-1:exon:18705;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 31145 | 31285 | 31145 | ID=Msa1402010-mRNA-1:exon:18704;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 31394 | 31441 | 31394 | ID=Msa1402010-mRNA-1:exon:18703;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 31532 | 31627 | 31532 | ID=Msa1402010-mRNA-1:exon:18702;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 31715 | 31782 | 31715 | ID=Msa1402010-mRNA-1:exon:18701;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 31878 | 31935 | 31878 | ID=Msa1402010-mRNA-1:exon:18700;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 32024 | 32110 | 32024 | ID=Msa1402010-mRNA-1:exon:18699;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 32189 | 32236 | 32189 | ID=Msa1402010-mRNA-1:exon:18698;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 32328 | 32384 | 32328 | ID=Msa1402010-mRNA-1:exon:18697;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 32483 | 32741 | 32483 | ID=Msa1402010-mRNA-1:exon:18696;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 32852 | 33044 | 32852 | ID=Msa1402010-mRNA-1:exon:18695;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 33155 | 33262 | 33155 | ID=Msa1402010-mRNA-1:exon:18694;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 34165 | 34281 | 34165 | ID=Msa1402010-mRNA-1:exon:18693;Parent=Msa1402010-mRNA-1 |
| tig0022800 | exon | 34423 | 34483 | 34423 | ID=Msa1402010-mRNA-1:exon:18692;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 34423 | 34483 | 34423 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 34165 | 34281 | 34165 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 33155 | 33262 | 33155 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 32852 | 33044 | 32852 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 32483 | 32741 | 32483 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 32328 | 32384 | 32328 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 32189 | 32236 | 32189 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 32024 | 32110 | 32024 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 31878 | 31935 | 31878 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 31715 | 31782 | 31715 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 31532 | 31627 | 31532 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 31394 | 31441 | 31394 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 31145 | 31285 | 31145 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | CDS | 31044 | 31055 | 31044 | ID=Msa1402010-mRNA-1:cds;Parent=Msa1402010-mRNA-1 |
| tig0022800 | three_prime_UTR | 30639 | 31043 | 30639 | ID=Msa1402010-mRNA-1:three_prime_utr;Parent=Msa1402010-mRNA-1 |
| tig0022800 | three_prime_UTR | 30443 | 30587 | 30443 | ID=Msa1402010-mRNA-1:three_prime_utr;Parent=Msa1402010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
