AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0613860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0613860 MtrunA17_Chr4g0049701 59.459 296 79 7 6 298 67 324 7.76e-114 331
Msa0613860 MtrunA17_Chr4g0049651 67.200 250 53 3 6 255 70 290 7.23e-109 325
Msa0613860 MtrunA17_Chr4g0049651 40.316 253 74 6 93 297 294 517 1.55e-36 136
Msa0613860 MtrunA17_Chr4g0049681 76.712 219 18 4 82 298 83 270 2.56e-108 315
Msa0613860 MtrunA17_Chr4g0049681 65.060 83 27 2 174 255 11 92 7.04e-24 98.2
Msa0613860 MtrunA17_Chr4g0049671 61.728 243 60 5 6 246 61 272 2.18e-90 281
Msa0613860 MtrunA17_Chr4g0049671 54.658 161 40 5 92 249 383 513 5.99e-35 133
Msa0613860 MtrunA17_Chr4g0049671 43.077 130 52 4 118 246 274 382 8.15e-17 80.5
Msa0613860 MtrunA17_Chr4g0060581 40.244 82 37 3 8 82 77 153 1.74e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0613860 AT1G69700.1 39.130 92 49 3 6 90 74 165 1.33e-11 62.8

Find 78 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGACTTTACATATTATTT+TGG 0.191954 4_2:+62740827 None:intergenic
TTGAAAGTTGAAAAGAAAAT+TGG 0.240348 4_2:-62740689 Msa0613860:three_prime_UTR
TTATATCTTTGTGCTCAATT+TGG 0.251358 4_2:+62741961 None:intergenic
TTGGAATTAATCATCCTAAT+AGG 0.284694 4_2:+62740846 None:intergenic
TAACATTGCTGATTCTAAAA+TGG 0.284825 4_2:-62740629 Msa0613860:three_prime_UTR
CAAGGAAAGATGAAACTATA+TGG 0.292023 4_2:-62741378 Msa0613860:CDS
TACGTGGCCTCTCACATAAA+AGG 0.311728 4_2:-62740780 Msa0613860:CDS
AGTTCCTTTGGTTTCTATTA+CGG 0.314694 4_2:+62741076 None:intergenic
GCACAAAGATATAAAAGATT+TGG 0.315985 4_2:-62741952 Msa0613860:CDS
TGTGACTACTTGCGGTTTCA+TGG 0.322322 4_2:+62742505 None:intergenic
AGAACCTATCAGAACCTATT+AGG 0.329675 4_2:-62740860 Msa0613860:CDS
CACATAGCTGTTTACCTTGT+TGG 0.332650 4_2:+62742370 None:intergenic
AGAAGCGACAAATGAAATTA+TGG 0.343558 4_2:-62742159 Msa0613860:CDS
TCATTTGTCGCTTCTGCATC+AGG 0.351305 4_2:+62742167 None:intergenic
GACACTTTCAGCAGTTCCTT+TGG 0.352458 4_2:+62741064 None:intergenic
TTAAGCTAATGATCATCTTC+TGG 0.364058 4_2:-62742583 Msa0613860:CDS
GTTGGCAATGAGTTTCTCTA+AGG 0.364553 4_2:+62742388 None:intergenic
CCCTGTGTCTCCTTCCCCTC+AGG 0.376332 4_2:+62740928 None:intergenic
AAGGAGACACAGGGAAACTA+TGG 0.387321 4_2:-62740919 Msa0613860:CDS
TCCCCTCAGGTGGGAAATCA+AGG 0.395905 4_2:+62740941 None:intergenic
TCATCCTAATAGGTTCTGAT+AGG 0.414047 4_2:+62740856 None:intergenic
CTTGAGATAACCATGTTTGA+GGG 0.419066 4_2:-62740720 Msa0613860:three_prime_UTR
GAGAAATATATGAAAGAGAA+TGG 0.445755 4_2:-62742419 Msa0613860:CDS
TGGCTCATCATACCGGACTT+TGG 0.448937 4_2:-62742563 Msa0613860:CDS
GTGGACTTGTGCTTTATGTT+TGG 0.459600 4_2:-62740985 Msa0613860:CDS
TGTGTCTCCTTCCCCTCAGG+TGG 0.461654 4_2:+62740931 None:intergenic
TGAATGAAGTCTTACTTGCT+TGG 0.462071 4_2:+62741899 None:intergenic
TCATTACCATGCGTGACATC+AGG 0.468355 4_2:-62742625 None:intergenic
AGTCTTACTTGCTTGGTAGC+AGG 0.482500 4_2:+62741906 None:intergenic
CTTGATCTAGTGCAGACAAA+TGG 0.488996 4_2:-62741993 Msa0613860:CDS
ACTTGAGATAACCATGTTTG+AGG 0.497199 4_2:-62740721 Msa0613860:three_prime_UTR
CATGGAGGTTAAACAACTAC+TGG 0.497837 4_2:-62742484 Msa0613860:CDS
GCTGAAAGTGTCACAGCTTG+TGG 0.498708 4_2:-62741053 Msa0613860:CDS
AACCTCCATGTGACTACTTG+CGG 0.500472 4_2:+62742497 None:intergenic
TAAGAAGCTCGTCCAAAGTC+CGG 0.501414 4_2:+62742551 None:intergenic
AAGGAAAGATGAAACTATAT+GGG 0.505487 4_2:-62741377 Msa0613860:CDS
TAAACAACTACTGGAGGAAG+TGG 0.507612 4_2:-62742475 Msa0613860:CDS
ACCTGAGGGGAAGGAGACAC+AGG 0.508727 4_2:-62740929 Msa0613860:CDS
TAGGATTTCTTTATTATCAG+TGG 0.509477 4_2:+62742136 None:intergenic
CATCTTCTGGCTCATCATAC+CGG 0.514317 4_2:-62742570 Msa0613860:CDS
TTGTGCTTTATGTTTGGTAA+CGG 0.515135 4_2:-62740979 Msa0613860:CDS
TAGTAAGTGACATGTGTGAT+TGG 0.516774 4_2:+62740554 None:intergenic
CAAAGATATAAAAGATTTGG+AGG 0.519689 4_2:-62741949 Msa0613860:CDS
AACCTTGATTTCCCACCTGA+GGG 0.523324 4_2:-62740943 Msa0613860:CDS
TGATTTCCCACCTGAGGGGA+AGG 0.524616 4_2:-62740938 Msa0613860:CDS
GTGACATCAGGTTTCACCTC+TGG 0.539831 4_2:-62742613 Msa0613860:CDS
ACGTGGCCTCTCACATAAAA+GGG 0.540766 4_2:-62740779 Msa0613860:CDS
AGAAGGCAGTGCAGAAAGAG+TGG 0.545798 4_2:-62741004 Msa0613860:CDS
ACTTGCCACAATATTAGCAT+AGG 0.549888 4_2:+62741115 None:intergenic
TCCTCAGAGTTCTACACAGA+AGG 0.558127 4_2:-62741021 Msa0613860:CDS
ACAGCTATTATCAGTGGAGA+AGG 0.566741 4_2:+62740656 None:intergenic
AAGTAAATGTCCCTCAAACA+TGG 0.568318 4_2:+62740710 None:intergenic
TAATATTATGCTTCCAAGTG+AGG 0.575886 4_2:-62740805 Msa0613860:CDS
ATGATCATTAGCTTAACGTA+TGG 0.579799 4_2:+62742590 None:intergenic
GAGGCCACGTAGTCCTCACT+TGG 0.584298 4_2:+62740792 None:intergenic
GTGTCTCCTTCCCCTCAGGT+GGG 0.586091 4_2:+62740932 None:intergenic
GAGAACCTATGCTAATATTG+TGG 0.589138 4_2:-62741120 Msa0613860:CDS
ACATTTAGTACTTAACGAGA+GGG 0.589713 4_2:-62742016 Msa0613860:intron
TGATAATAAAGAAATCCTAA+AGG 0.593440 4_2:-62742132 Msa0613860:intron
GACATTTAGTACTTAACGAG+AGG 0.600522 4_2:-62742017 Msa0613860:intron
TGTCACAGCTTGTGGAGAGG+AGG 0.601283 4_2:-62741045 Msa0613860:CDS
AAACCTTGATTTCCCACCTG+AGG 0.613224 4_2:-62740944 Msa0613860:CDS
AGAGAAACTCATTGCCAACA+AGG 0.624521 4_2:-62742384 Msa0613860:intron
TATGGTACAGCTATTATCAG+TGG 0.639317 4_2:+62740650 None:intergenic
TGAAACCGCAAGTAGTCACA+TGG 0.639727 4_2:-62742502 Msa0613860:CDS
TATTGTAGAACACAATGTGT+AGG 0.642645 4_2:-62742190 Msa0613860:intron
CCTGAGGGGAAGGAGACACA+GGG 0.643482 4_2:-62740928 Msa0613860:CDS
GAAACTATATGGGAAACAAG+TGG 0.653519 4_2:-62741367 Msa0613860:CDS
GGAGGTTAAACAACTACTGG+AGG 0.657523 4_2:-62742481 Msa0613860:CDS
GTGAAACCTGATGTCACGCA+TGG 0.661268 4_2:+62742619 None:intergenic
AAGTGTCACAGCTTGTGGAG+AGG 0.670743 4_2:-62741048 Msa0613860:CDS
ACCTTGATTTCCCACCTGAG+GGG 0.671087 4_2:-62740942 Msa0613860:CDS
GCTTCCAAGTGAGGACTACG+TGG 0.677404 4_2:-62740796 Msa0613860:CDS
TGGCCTCTCACATAAAAGGG+TGG 0.683408 4_2:-62740776 Msa0613860:CDS
TCAGCCGTAATAGAAACCAA+AGG 0.687722 4_2:-62741080 Msa0613860:CDS
TTAGCTTAACGTATGGCCAG+AGG 0.695704 4_2:+62742597 None:intergenic
GCCTTCTGTGTAGAACTCTG+AGG 0.716594 4_2:+62741020 None:intergenic
AACCGCAAGTAGTCACATGG+AGG 0.759885 4_2:-62742499 Msa0613860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGTATATATATGAATTTTG+TGG - chr4_2:62741870-62741889 Msa0613860:intron 15.0%
!!! TAGTATATATATGAATTTTG+TGG - chr4_2:62741870-62741889 Msa0613860:intron 15.0%
!!! GGACATTTTTATTTTATGTT+GGG + chr4_2:62740740-62740759 None:intergenic 20.0%
!!! TGGACATTTTTATTTTATGT+TGG + chr4_2:62740741-62740760 None:intergenic 20.0%
!! TGATAATAAAGAAATCCTAA+AGG - chr4_2:62740920-62740939 Msa0613860:CDS 20.0%
!! CTAATCATTAAGTTTCTATT+TGG + chr4_2:62741187-62741206 None:intergenic 20.0%
!! CAAATAGAAACTTAATGATT+AGG - chr4_2:62741185-62741204 Msa0613860:intron 20.0%
!!! CTCAAATAAAAAGTACAATT+AGG + chr4_2:62741288-62741307 None:intergenic 20.0%
!!! CTAATTGTACTTTTTATTTG+AGG - chr4_2:62741286-62741305 Msa0613860:intron 20.0%
!! TAAAAAATTGTATTAGAGGA+GGG + chr4_2:62741571-62741590 None:intergenic 20.0%
!! GAACTAAAAAATTGTATTAG+AGG + chr4_2:62741575-62741594 None:intergenic 20.0%
!!! ATTTTTATTGTCATTGTTGT+TGG - chr4_2:62741904-62741923 Msa0613860:intron 20.0%
!!! ACAGACTTTACATATTATTT+TGG + chr4_2:62742228-62742247 None:intergenic 20.0%
!! TTGAAAGTTGAAAAGAAAAT+TGG - chr4_2:62742363-62742382 Msa0613860:intron 20.0%
!! AAAATCTGCTATGTAAAAAT+AGG + chr4_2:62742601-62742620 None:intergenic 20.0%
!!! GGACATTTTTATTTTATGTT+GGG + chr4_2:62740740-62740759 None:intergenic 20.0%
!!! TGGACATTTTTATTTTATGT+TGG + chr4_2:62740741-62740760 None:intergenic 20.0%
!! TGATAATAAAGAAATCCTAA+AGG - chr4_2:62740920-62740939 Msa0613860:CDS 20.0%
!! CTAATCATTAAGTTTCTATT+TGG + chr4_2:62741187-62741206 None:intergenic 20.0%
!! CAAATAGAAACTTAATGATT+AGG - chr4_2:62741185-62741204 Msa0613860:intron 20.0%
!!! CTCAAATAAAAAGTACAATT+AGG + chr4_2:62741288-62741307 None:intergenic 20.0%
!!! CTAATTGTACTTTTTATTTG+AGG - chr4_2:62741286-62741305 Msa0613860:intron 20.0%
!! TAAAAAATTGTATTAGAGGA+GGG + chr4_2:62741571-62741590 None:intergenic 20.0%
!! GAACTAAAAAATTGTATTAG+AGG + chr4_2:62741575-62741594 None:intergenic 20.0%
!!! ATTTTTATTGTCATTGTTGT+TGG - chr4_2:62741904-62741923 Msa0613860:intron 20.0%
!!! ACAGACTTTACATATTATTT+TGG + chr4_2:62742228-62742247 None:intergenic 20.0%
!! TTGAAAGTTGAAAAGAAAAT+TGG - chr4_2:62742363-62742382 Msa0613860:intron 20.0%
!! AAAATCTGCTATGTAAAAAT+AGG + chr4_2:62742601-62742620 None:intergenic 20.0%
! GAGAAATATATGAAAGAGAA+TGG - chr4_2:62740633-62740652 Msa0613860:three_prime_UTR 25.0%
!! AACTCTAGAAGAATTCTATA+GGG - chr4_2:62740769-62740788 Msa0613860:CDS 25.0%
! TATAAAAACATCCACATACT+TGG + chr4_2:62740797-62740816 None:intergenic 25.0%
! TAGGATTTCTTTATTATCAG+TGG + chr4_2:62740919-62740938 None:intergenic 25.0%
!! AAATCCTAAAGGTAAAGTTT+TGG - chr4_2:62740931-62740950 Msa0613860:CDS 25.0%
! TTATATCTTTGTGCTCAATT+TGG + chr4_2:62741094-62741113 None:intergenic 25.0%
! GCACAAAGATATAAAAGATT+TGG - chr4_2:62741100-62741119 Msa0613860:CDS 25.0%
! CAAAGATATAAAAGATTTGG+AGG - chr4_2:62741103-62741122 Msa0613860:CDS 25.0%
!! TGAGAAATCTTTCACATTTT+TGG - chr4_2:62741428-62741447 Msa0613860:intron 25.0%
! CTAAAAAATTGTATTAGAGG+AGG + chr4_2:62741572-62741591 None:intergenic 25.0%
! AGAAGAAACTAAAGAACATT+GGG + chr4_2:62741641-62741660 None:intergenic 25.0%
! AAGAAGAAACTAAAGAACAT+TGG + chr4_2:62741642-62741661 None:intergenic 25.0%
! AAGGAAAGATGAAACTATAT+GGG - chr4_2:62741675-62741694 Msa0613860:intron 25.0%
!! TTCTGATGTTTTCTATTTGT+AGG - chr4_2:62741727-62741746 Msa0613860:intron 25.0%
! TTGGAATTAATCATCCTAAT+AGG + chr4_2:62742209-62742228 None:intergenic 25.0%
!!! TTTTAGAATCAGCAATGTTA+TGG + chr4_2:62742423-62742442 None:intergenic 25.0%
!!! TAACATTGCTGATTCTAAAA+TGG - chr4_2:62742423-62742442 Msa0613860:CDS 25.0%
! GAGAAATATATGAAAGAGAA+TGG - chr4_2:62740633-62740652 Msa0613860:three_prime_UTR 25.0%
!! AACTCTAGAAGAATTCTATA+GGG - chr4_2:62740769-62740788 Msa0613860:CDS 25.0%
! TATAAAAACATCCACATACT+TGG + chr4_2:62740797-62740816 None:intergenic 25.0%
! TAGGATTTCTTTATTATCAG+TGG + chr4_2:62740919-62740938 None:intergenic 25.0%
!! AAATCCTAAAGGTAAAGTTT+TGG - chr4_2:62740931-62740950 Msa0613860:CDS 25.0%
! TTATATCTTTGTGCTCAATT+TGG + chr4_2:62741094-62741113 None:intergenic 25.0%
! GCACAAAGATATAAAAGATT+TGG - chr4_2:62741100-62741119 Msa0613860:CDS 25.0%
! CAAAGATATAAAAGATTTGG+AGG - chr4_2:62741103-62741122 Msa0613860:CDS 25.0%
!! TGAGAAATCTTTCACATTTT+TGG - chr4_2:62741428-62741447 Msa0613860:intron 25.0%
! CTAAAAAATTGTATTAGAGG+AGG + chr4_2:62741572-62741591 None:intergenic 25.0%
! AGAAGAAACTAAAGAACATT+GGG + chr4_2:62741641-62741660 None:intergenic 25.0%
! AAGAAGAAACTAAAGAACAT+TGG + chr4_2:62741642-62741661 None:intergenic 25.0%
! AAGGAAAGATGAAACTATAT+GGG - chr4_2:62741675-62741694 Msa0613860:intron 25.0%
!! TTCTGATGTTTTCTATTTGT+AGG - chr4_2:62741727-62741746 Msa0613860:intron 25.0%
! TTGGAATTAATCATCCTAAT+AGG + chr4_2:62742209-62742228 None:intergenic 25.0%
!!! TTTTAGAATCAGCAATGTTA+TGG + chr4_2:62742423-62742442 None:intergenic 25.0%
!!! TAACATTGCTGATTCTAAAA+TGG - chr4_2:62742423-62742442 Msa0613860:CDS 25.0%
! ATGATCATTAGCTTAACGTA+TGG + chr4_2:62740465-62740484 None:intergenic 30.0%
TTAAGCTAATGATCATCTTC+TGG - chr4_2:62740469-62740488 Msa0613860:three_prime_UTR 30.0%
!!! CCAATTTTTTATGCAGCATA+AGG + chr4_2:62740709-62740728 None:intergenic 30.0%
CCTTATGCTGCATAAAAAAT+TGG - chr4_2:62740706-62740725 Msa0613860:three_prime_UTR 30.0%
! GAACTCTAGAAGAATTCTAT+AGG - chr4_2:62740768-62740787 Msa0613860:CDS 30.0%
TATTGTAGAACACAATGTGT+AGG - chr4_2:62740862-62740881 Msa0613860:CDS 30.0%
AGAAGCGACAAATGAAATTA+TGG - chr4_2:62740893-62740912 Msa0613860:CDS 30.0%
ACATTTAGTACTTAACGAGA+GGG - chr4_2:62741036-62741055 Msa0613860:CDS 30.0%
AAACTTAATGATTAGGCTTG+AGG - chr4_2:62741192-62741211 Msa0613860:intron 30.0%
! ATTCTAAGAGGTTATTTGTG+TGG - chr4_2:62741216-62741235 Msa0613860:intron 30.0%
ATATAAAACCCTCCTCATTT+GGG + chr4_2:62741599-62741618 None:intergenic 30.0%
AATATAAAACCCTCCTCATT+TGG + chr4_2:62741600-62741619 None:intergenic 30.0%
AAGAAACTAAAGAACATTGG+GGG + chr4_2:62741639-62741658 None:intergenic 30.0%
GAAGAAACTAAAGAACATTG+GGG + chr4_2:62741640-62741659 None:intergenic 30.0%
!! CTTCTTTTCTTTTGATAGCA+AGG - chr4_2:62741656-62741675 Msa0613860:intron 30.0%
CAAGGAAAGATGAAACTATA+TGG - chr4_2:62741674-62741693 Msa0613860:intron 30.0%
ATGGTTATTACTGCATACAA+GGG + chr4_2:62741823-62741842 None:intergenic 30.0%
TATGGTTATTACTGCATACA+AGG + chr4_2:62741824-62741843 None:intergenic 30.0%
TAACCATAGTTCTTTGTGAA+AGG - chr4_2:62741836-62741855 Msa0613860:intron 30.0%
AAACCTTTCACAAAGAACTA+TGG + chr4_2:62741842-62741861 None:intergenic 30.0%
TAGTTCTTTGTGAAAGGTTT+AGG - chr4_2:62741842-62741861 Msa0613860:intron 30.0%
! ATATATGAATTTTGTGGACG+TGG - chr4_2:62741876-62741895 Msa0613860:intron 30.0%
! AGTTCCTTTGGTTTCTATTA+CGG + chr4_2:62741979-62741998 None:intergenic 30.0%
TTGTGCTTTATGTTTGGTAA+CGG - chr4_2:62742073-62742092 Msa0613860:intron 30.0%
TAATATTATGCTTCCAAGTG+AGG - chr4_2:62742247-62742266 Msa0613860:intron 30.0%
! ATGATCATTAGCTTAACGTA+TGG + chr4_2:62740465-62740484 None:intergenic 30.0%
TTAAGCTAATGATCATCTTC+TGG - chr4_2:62740469-62740488 Msa0613860:three_prime_UTR 30.0%
!!! CCAATTTTTTATGCAGCATA+AGG + chr4_2:62740709-62740728 None:intergenic 30.0%
CCTTATGCTGCATAAAAAAT+TGG - chr4_2:62740706-62740725 Msa0613860:three_prime_UTR 30.0%
! GAACTCTAGAAGAATTCTAT+AGG - chr4_2:62740768-62740787 Msa0613860:CDS 30.0%
TATTGTAGAACACAATGTGT+AGG - chr4_2:62740862-62740881 Msa0613860:CDS 30.0%
AGAAGCGACAAATGAAATTA+TGG - chr4_2:62740893-62740912 Msa0613860:CDS 30.0%
ACATTTAGTACTTAACGAGA+GGG - chr4_2:62741036-62741055 Msa0613860:CDS 30.0%
AAACTTAATGATTAGGCTTG+AGG - chr4_2:62741192-62741211 Msa0613860:intron 30.0%
! ATTCTAAGAGGTTATTTGTG+TGG - chr4_2:62741216-62741235 Msa0613860:intron 30.0%
ATATAAAACCCTCCTCATTT+GGG + chr4_2:62741599-62741618 None:intergenic 30.0%
AATATAAAACCCTCCTCATT+TGG + chr4_2:62741600-62741619 None:intergenic 30.0%
AAGAAACTAAAGAACATTGG+GGG + chr4_2:62741639-62741658 None:intergenic 30.0%
GAAGAAACTAAAGAACATTG+GGG + chr4_2:62741640-62741659 None:intergenic 30.0%
!! CTTCTTTTCTTTTGATAGCA+AGG - chr4_2:62741656-62741675 Msa0613860:intron 30.0%
CAAGGAAAGATGAAACTATA+TGG - chr4_2:62741674-62741693 Msa0613860:intron 30.0%
ATGGTTATTACTGCATACAA+GGG + chr4_2:62741823-62741842 None:intergenic 30.0%
TATGGTTATTACTGCATACA+AGG + chr4_2:62741824-62741843 None:intergenic 30.0%
TAACCATAGTTCTTTGTGAA+AGG - chr4_2:62741836-62741855 Msa0613860:intron 30.0%
AAACCTTTCACAAAGAACTA+TGG + chr4_2:62741842-62741861 None:intergenic 30.0%
TAGTTCTTTGTGAAAGGTTT+AGG - chr4_2:62741842-62741861 Msa0613860:intron 30.0%
! ATATATGAATTTTGTGGACG+TGG - chr4_2:62741876-62741895 Msa0613860:intron 30.0%
! AGTTCCTTTGGTTTCTATTA+CGG + chr4_2:62741979-62741998 None:intergenic 30.0%
TTGTGCTTTATGTTTGGTAA+CGG - chr4_2:62742073-62742092 Msa0613860:intron 30.0%
TAATATTATGCTTCCAAGTG+AGG - chr4_2:62742247-62742266 Msa0613860:intron 30.0%
!! TCTTCTAGAGTTCAAGTAGT+TGG + chr4_2:62740761-62740780 None:intergenic 35.0%
AACGCCAAAACTTTACCTTT+AGG + chr4_2:62740938-62740957 None:intergenic 35.0%
GACATTTAGTACTTAACGAG+AGG - chr4_2:62741035-62741054 Msa0613860:CDS 35.0%
TGAATGAAGTCTTACTTGCT+TGG + chr4_2:62741156-62741175 None:intergenic 35.0%
ATAGTCGCTATCTCCTATTT+AGG - chr4_2:62741339-62741358 Msa0613860:intron 35.0%
!! TCTCCTATTTAGGCTTTGTT+TGG - chr4_2:62741349-62741368 Msa0613860:CDS 35.0%
!! CTCCTATTTAGGCTTTGTTT+GGG - chr4_2:62741350-62741369 Msa0613860:CDS 35.0%
! TTGTATTAGAGGAGGGTTTT+GGG + chr4_2:62741564-62741583 None:intergenic 35.0%
! ATTGTATTAGAGGAGGGTTT+TGG + chr4_2:62741565-62741584 None:intergenic 35.0%
!!! TTTTTTAGTTCCCCCAAATG+AGG - chr4_2:62741584-62741603 Msa0613860:intron 35.0%
TATAAAACCCTCCTCATTTG+GGG + chr4_2:62741598-62741617 None:intergenic 35.0%
AGAAACTAAAGAACATTGGG+GGG + chr4_2:62741638-62741657 None:intergenic 35.0%
GAAACTATATGGGAAACAAG+TGG - chr4_2:62741685-62741704 Msa0613860:intron 35.0%
GAGAACCTATGCTAATATTG+TGG - chr4_2:62741932-62741951 Msa0613860:CDS 35.0%
ACTTGCCACAATATTAGCAT+AGG + chr4_2:62741940-62741959 None:intergenic 35.0%
! TTCTGATAGGTTCTTTTGCA+GGG + chr4_2:62742186-62742205 None:intergenic 35.0%
AGAACCTATCAGAACCTATT+AGG - chr4_2:62742192-62742211 Msa0613860:intron 35.0%
! TCATCCTAATAGGTTCTGAT+AGG + chr4_2:62742199-62742218 None:intergenic 35.0%
ACTTGAGATAACCATGTTTG+AGG - chr4_2:62742331-62742350 Msa0613860:intron 35.0%
CTTGAGATAACCATGTTTGA+GGG - chr4_2:62742332-62742351 Msa0613860:intron 35.0%
AAGTAAATGTCCCTCAAACA+TGG + chr4_2:62742345-62742364 None:intergenic 35.0%
TATGGTACAGCTATTATCAG+TGG + chr4_2:62742405-62742424 None:intergenic 35.0%
TAGTAAGTGACATGTGTGAT+TGG + chr4_2:62742501-62742520 None:intergenic 35.0%
!! TCTTCTAGAGTTCAAGTAGT+TGG + chr4_2:62740761-62740780 None:intergenic 35.0%
AACGCCAAAACTTTACCTTT+AGG + chr4_2:62740938-62740957 None:intergenic 35.0%
GACATTTAGTACTTAACGAG+AGG - chr4_2:62741035-62741054 Msa0613860:CDS 35.0%
TGAATGAAGTCTTACTTGCT+TGG + chr4_2:62741156-62741175 None:intergenic 35.0%
ATAGTCGCTATCTCCTATTT+AGG - chr4_2:62741339-62741358 Msa0613860:intron 35.0%
!! TCTCCTATTTAGGCTTTGTT+TGG - chr4_2:62741349-62741368 Msa0613860:CDS 35.0%
!! CTCCTATTTAGGCTTTGTTT+GGG - chr4_2:62741350-62741369 Msa0613860:CDS 35.0%
! TTGTATTAGAGGAGGGTTTT+GGG + chr4_2:62741564-62741583 None:intergenic 35.0%
! ATTGTATTAGAGGAGGGTTT+TGG + chr4_2:62741565-62741584 None:intergenic 35.0%
!!! TTTTTTAGTTCCCCCAAATG+AGG - chr4_2:62741584-62741603 Msa0613860:intron 35.0%
TATAAAACCCTCCTCATTTG+GGG + chr4_2:62741598-62741617 None:intergenic 35.0%
AGAAACTAAAGAACATTGGG+GGG + chr4_2:62741638-62741657 None:intergenic 35.0%
GAAACTATATGGGAAACAAG+TGG - chr4_2:62741685-62741704 Msa0613860:intron 35.0%
GAGAACCTATGCTAATATTG+TGG - chr4_2:62741932-62741951 Msa0613860:CDS 35.0%
ACTTGCCACAATATTAGCAT+AGG + chr4_2:62741940-62741959 None:intergenic 35.0%
! TTCTGATAGGTTCTTTTGCA+GGG + chr4_2:62742186-62742205 None:intergenic 35.0%
AGAACCTATCAGAACCTATT+AGG - chr4_2:62742192-62742211 Msa0613860:intron 35.0%
! TCATCCTAATAGGTTCTGAT+AGG + chr4_2:62742199-62742218 None:intergenic 35.0%
ACTTGAGATAACCATGTTTG+AGG - chr4_2:62742331-62742350 Msa0613860:intron 35.0%
CTTGAGATAACCATGTTTGA+GGG - chr4_2:62742332-62742351 Msa0613860:intron 35.0%
AAGTAAATGTCCCTCAAACA+TGG + chr4_2:62742345-62742364 None:intergenic 35.0%
TATGGTACAGCTATTATCAG+TGG + chr4_2:62742405-62742424 None:intergenic 35.0%
TAGTAAGTGACATGTGTGAT+TGG + chr4_2:62742501-62742520 None:intergenic 35.0%
CATGGAGGTTAAACAACTAC+TGG - chr4_2:62740568-62740587 Msa0613860:three_prime_UTR 40.0%
TAAACAACTACTGGAGGAAG+TGG - chr4_2:62740577-62740596 Msa0613860:three_prime_UTR 40.0%
GTTGGCAATGAGTTTCTCTA+AGG + chr4_2:62740667-62740686 None:intergenic 40.0%
AGAGAAACTCATTGCCAACA+AGG - chr4_2:62740668-62740687 Msa0613860:three_prime_UTR 40.0%
CACATAGCTGTTTACCTTGT+TGG + chr4_2:62740685-62740704 None:intergenic 40.0%
CAACAAGGTAAACAGCTATG+TGG - chr4_2:62740683-62740702 Msa0613860:three_prime_UTR 40.0%
TCTATAGGGAACCAAGTATG+TGG - chr4_2:62740783-62740802 Msa0613860:CDS 40.0%
! TTTTGGCGTTAAGTCAGTTG+TGG - chr4_2:62740948-62740967 Msa0613860:CDS 40.0%
TGTCACAGTGAGACTAAGAT+AGG + chr4_2:62741019-62741038 None:intergenic 40.0%
CTTGATCTAGTGCAGACAAA+TGG - chr4_2:62741059-62741078 Msa0613860:CDS 40.0%
CTCCCAAACAAAGCCTAAAT+AGG + chr4_2:62741355-62741374 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+CGG - chr4_2:62741357-62741376 Msa0613860:CDS 40.0%
TTTGGGGGGAGAGAAATATA+GGG - chr4_2:62741400-62741419 Msa0613860:intron 40.0%
ATAAAACCCTCCTCATTTGG+GGG + chr4_2:62741597-62741616 None:intergenic 40.0%
ATGAGCCATACTTCAGAGAA+GGG + chr4_2:62741782-62741801 None:intergenic 40.0%
TCAGCCGTAATAGAAACCAA+AGG - chr4_2:62741972-62741991 Msa0613860:CDS 40.0%
GTGGACTTGTGCTTTATGTT+TGG - chr4_2:62742067-62742086 Msa0613860:intron 40.0%
! GTTCTGATAGGTTCTTTTGC+AGG + chr4_2:62742187-62742206 None:intergenic 40.0%
ACAGCTATTATCAGTGGAGA+AGG + chr4_2:62742399-62742418 None:intergenic 40.0%
ACACACACACACTAGAAATG+TGG + chr4_2:62742531-62742550 None:intergenic 40.0%
CATGGAGGTTAAACAACTAC+TGG - chr4_2:62740568-62740587 Msa0613860:three_prime_UTR 40.0%
TAAACAACTACTGGAGGAAG+TGG - chr4_2:62740577-62740596 Msa0613860:three_prime_UTR 40.0%
GTTGGCAATGAGTTTCTCTA+AGG + chr4_2:62740667-62740686 None:intergenic 40.0%
AGAGAAACTCATTGCCAACA+AGG - chr4_2:62740668-62740687 Msa0613860:three_prime_UTR 40.0%
CACATAGCTGTTTACCTTGT+TGG + chr4_2:62740685-62740704 None:intergenic 40.0%
CAACAAGGTAAACAGCTATG+TGG - chr4_2:62740683-62740702 Msa0613860:three_prime_UTR 40.0%
TCTATAGGGAACCAAGTATG+TGG - chr4_2:62740783-62740802 Msa0613860:CDS 40.0%
! TTTTGGCGTTAAGTCAGTTG+TGG - chr4_2:62740948-62740967 Msa0613860:CDS 40.0%
TGTCACAGTGAGACTAAGAT+AGG + chr4_2:62741019-62741038 None:intergenic 40.0%
CTTGATCTAGTGCAGACAAA+TGG - chr4_2:62741059-62741078 Msa0613860:CDS 40.0%
CTCCCAAACAAAGCCTAAAT+AGG + chr4_2:62741355-62741374 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+CGG - chr4_2:62741357-62741376 Msa0613860:CDS 40.0%
TTTGGGGGGAGAGAAATATA+GGG - chr4_2:62741400-62741419 Msa0613860:intron 40.0%
ATAAAACCCTCCTCATTTGG+GGG + chr4_2:62741597-62741616 None:intergenic 40.0%
ATGAGCCATACTTCAGAGAA+GGG + chr4_2:62741782-62741801 None:intergenic 40.0%
TCAGCCGTAATAGAAACCAA+AGG - chr4_2:62741972-62741991 Msa0613860:CDS 40.0%
GTGGACTTGTGCTTTATGTT+TGG - chr4_2:62742067-62742086 Msa0613860:intron 40.0%
! GTTCTGATAGGTTCTTTTGC+AGG + chr4_2:62742187-62742206 None:intergenic 40.0%
ACAGCTATTATCAGTGGAGA+AGG + chr4_2:62742399-62742418 None:intergenic 40.0%
ACACACACACACTAGAAATG+TGG + chr4_2:62742531-62742550 None:intergenic 40.0%
TTAGCTTAACGTATGGCCAG+AGG + chr4_2:62740458-62740477 None:intergenic 45.0%
!! CATCTTCTGGCTCATCATAC+CGG - chr4_2:62740482-62740501 Msa0613860:three_prime_UTR 45.0%
TAAGAAGCTCGTCCAAAGTC+CGG + chr4_2:62740504-62740523 None:intergenic 45.0%
TGTGACTACTTGCGGTTTCA+TGG + chr4_2:62740550-62740569 None:intergenic 45.0%
TGAAACCGCAAGTAGTCACA+TGG - chr4_2:62740550-62740569 Msa0613860:three_prime_UTR 45.0%
AACCTCCATGTGACTACTTG+CGG + chr4_2:62740558-62740577 None:intergenic 45.0%
GGAGGTTAAACAACTACTGG+AGG - chr4_2:62740571-62740590 Msa0613860:three_prime_UTR 45.0%
! TCATTTGTCGCTTCTGCATC+AGG + chr4_2:62740888-62740907 None:intergenic 45.0%
! AGTCTTACTTGCTTGGTAGC+AGG + chr4_2:62741149-62741168 None:intergenic 45.0%
! TAGGCTTGAGGCATTCTAAG+AGG - chr4_2:62741204-62741223 Msa0613860:intron 45.0%
TTGTTGCTCTTGTTGAGTGC+TGG - chr4_2:62741254-62741273 Msa0613860:intron 45.0%
TGTTGCTCTTGTTGAGTGCT+GGG - chr4_2:62741255-62741274 Msa0613860:intron 45.0%
! CTTTGGGGGGAGAGAAATAT+AGG - chr4_2:62741399-62741418 Msa0613860:intron 45.0%
!!! ATTAGAGGAGGGTTTTGGGA+GGG + chr4_2:62741560-62741579 None:intergenic 45.0%
!!! TATTAGAGGAGGGTTTTGGG+AGG + chr4_2:62741561-62741580 None:intergenic 45.0%
! TTTAGTTCCCCCAAATGAGG+AGG - chr4_2:62741587-62741606 Msa0613860:intron 45.0%
TTAGTTCCCCCAAATGAGGA+GGG - chr4_2:62741588-62741607 Msa0613860:intron 45.0%
!! TCTACCCCTTCTCTGAAGTA+TGG - chr4_2:62741774-62741793 Msa0613860:intron 45.0%
TGAGCCATACTTCAGAGAAG+GGG + chr4_2:62741781-62741800 None:intergenic 45.0%
GATGAGCCATACTTCAGAGA+AGG + chr4_2:62741783-62741802 None:intergenic 45.0%
GACACTTTCAGCAGTTCCTT+TGG + chr4_2:62741991-62742010 None:intergenic 45.0%
TCCTCAGAGTTCTACACAGA+AGG - chr4_2:62742031-62742050 Msa0613860:intron 45.0%
AAACCTTGATTTCCCACCTG+AGG - chr4_2:62742108-62742127 Msa0613860:intron 45.0%
AACCTTGATTTCCCACCTGA+GGG - chr4_2:62742109-62742128 Msa0613860:intron 45.0%
AAGGAGACACAGGGAAACTA+TGG - chr4_2:62742133-62742152 Msa0613860:CDS 45.0%
! GATAGGTTCTTTTGCAGGGT+AGG + chr4_2:62742182-62742201 None:intergenic 45.0%
TACGTGGCCTCTCACATAAA+AGG - chr4_2:62742272-62742291 Msa0613860:intron 45.0%
ACGTGGCCTCTCACATAAAA+GGG - chr4_2:62742273-62742292 Msa0613860:intron 45.0%
! CTTCCACCCTTTTATGTGAG+AGG + chr4_2:62742282-62742301 None:intergenic 45.0%
TTAGCTTAACGTATGGCCAG+AGG + chr4_2:62740458-62740477 None:intergenic 45.0%
!! CATCTTCTGGCTCATCATAC+CGG - chr4_2:62740482-62740501 Msa0613860:three_prime_UTR 45.0%
TAAGAAGCTCGTCCAAAGTC+CGG + chr4_2:62740504-62740523 None:intergenic 45.0%
TGTGACTACTTGCGGTTTCA+TGG + chr4_2:62740550-62740569 None:intergenic 45.0%
TGAAACCGCAAGTAGTCACA+TGG - chr4_2:62740550-62740569 Msa0613860:three_prime_UTR 45.0%
AACCTCCATGTGACTACTTG+CGG + chr4_2:62740558-62740577 None:intergenic 45.0%
GGAGGTTAAACAACTACTGG+AGG - chr4_2:62740571-62740590 Msa0613860:three_prime_UTR 45.0%
! TCATTTGTCGCTTCTGCATC+AGG + chr4_2:62740888-62740907 None:intergenic 45.0%
! AGTCTTACTTGCTTGGTAGC+AGG + chr4_2:62741149-62741168 None:intergenic 45.0%
! TAGGCTTGAGGCATTCTAAG+AGG - chr4_2:62741204-62741223 Msa0613860:intron 45.0%
TTGTTGCTCTTGTTGAGTGC+TGG - chr4_2:62741254-62741273 Msa0613860:intron 45.0%
TGTTGCTCTTGTTGAGTGCT+GGG - chr4_2:62741255-62741274 Msa0613860:intron 45.0%
! CTTTGGGGGGAGAGAAATAT+AGG - chr4_2:62741399-62741418 Msa0613860:intron 45.0%
!!! ATTAGAGGAGGGTTTTGGGA+GGG + chr4_2:62741560-62741579 None:intergenic 45.0%
!!! TATTAGAGGAGGGTTTTGGG+AGG + chr4_2:62741561-62741580 None:intergenic 45.0%
! TTTAGTTCCCCCAAATGAGG+AGG - chr4_2:62741587-62741606 Msa0613860:intron 45.0%
TTAGTTCCCCCAAATGAGGA+GGG - chr4_2:62741588-62741607 Msa0613860:intron 45.0%
!! TCTACCCCTTCTCTGAAGTA+TGG - chr4_2:62741774-62741793 Msa0613860:intron 45.0%
TGAGCCATACTTCAGAGAAG+GGG + chr4_2:62741781-62741800 None:intergenic 45.0%
GATGAGCCATACTTCAGAGA+AGG + chr4_2:62741783-62741802 None:intergenic 45.0%
GACACTTTCAGCAGTTCCTT+TGG + chr4_2:62741991-62742010 None:intergenic 45.0%
TCCTCAGAGTTCTACACAGA+AGG - chr4_2:62742031-62742050 Msa0613860:intron 45.0%
AAACCTTGATTTCCCACCTG+AGG - chr4_2:62742108-62742127 Msa0613860:intron 45.0%
AACCTTGATTTCCCACCTGA+GGG - chr4_2:62742109-62742128 Msa0613860:intron 45.0%
AAGGAGACACAGGGAAACTA+TGG - chr4_2:62742133-62742152 Msa0613860:CDS 45.0%
! GATAGGTTCTTTTGCAGGGT+AGG + chr4_2:62742182-62742201 None:intergenic 45.0%
TACGTGGCCTCTCACATAAA+AGG - chr4_2:62742272-62742291 Msa0613860:intron 45.0%
ACGTGGCCTCTCACATAAAA+GGG - chr4_2:62742273-62742292 Msa0613860:intron 45.0%
! CTTCCACCCTTTTATGTGAG+AGG + chr4_2:62742282-62742301 None:intergenic 45.0%
GTGACATCAGGTTTCACCTC+TGG - chr4_2:62740439-62740458 Msa0613860:three_prime_UTR 50.0%
TGGCTCATCATACCGGACTT+TGG - chr4_2:62740489-62740508 Msa0613860:three_prime_UTR 50.0%
AACCGCAAGTAGTCACATGG+AGG - chr4_2:62740553-62740572 Msa0613860:three_prime_UTR 50.0%
!! GCTTTGTTTGGGAGTTCGGA+GGG - chr4_2:62741361-62741380 Msa0613860:CDS 50.0%
! CTTTGTTTGGGAGTTCGGAG+GGG - chr4_2:62741362-62741381 Msa0613860:CDS 50.0%
!! GCTGAAAGTGTCACAGCTTG+TGG - chr4_2:62741999-62742018 Msa0613860:CDS 50.0%
AAGTGTCACAGCTTGTGGAG+AGG - chr4_2:62742004-62742023 Msa0613860:CDS 50.0%
GCCTTCTGTGTAGAACTCTG+AGG + chr4_2:62742035-62742054 None:intergenic 50.0%
AGAAGGCAGTGCAGAAAGAG+TGG - chr4_2:62742048-62742067 Msa0613860:intron 50.0%
ACCTTGATTTCCCACCTGAG+GGG - chr4_2:62742110-62742129 Msa0613860:intron 50.0%
TGGCCTCTCACATAAAAGGG+TGG - chr4_2:62742276-62742295 Msa0613860:intron 50.0%
GTGAAACCTGATGTCACGCA+TGG + chr4_2:62740436-62740455 None:intergenic 50.0%
GTGACATCAGGTTTCACCTC+TGG - chr4_2:62740439-62740458 Msa0613860:three_prime_UTR 50.0%
TGGCTCATCATACCGGACTT+TGG - chr4_2:62740489-62740508 Msa0613860:three_prime_UTR 50.0%
AACCGCAAGTAGTCACATGG+AGG - chr4_2:62740553-62740572 Msa0613860:three_prime_UTR 50.0%
!! GCTTTGTTTGGGAGTTCGGA+GGG - chr4_2:62741361-62741380 Msa0613860:CDS 50.0%
! CTTTGTTTGGGAGTTCGGAG+GGG - chr4_2:62741362-62741381 Msa0613860:CDS 50.0%
!! GCTGAAAGTGTCACAGCTTG+TGG - chr4_2:62741999-62742018 Msa0613860:CDS 50.0%
AAGTGTCACAGCTTGTGGAG+AGG - chr4_2:62742004-62742023 Msa0613860:CDS 50.0%
GCCTTCTGTGTAGAACTCTG+AGG + chr4_2:62742035-62742054 None:intergenic 50.0%
AGAAGGCAGTGCAGAAAGAG+TGG - chr4_2:62742048-62742067 Msa0613860:intron 50.0%
ACCTTGATTTCCCACCTGAG+GGG - chr4_2:62742110-62742129 Msa0613860:intron 50.0%
TGGCCTCTCACATAAAAGGG+TGG - chr4_2:62742276-62742295 Msa0613860:intron 50.0%
!! GGCTTTGTTTGGGAGTTCGG+AGG - chr4_2:62741360-62741379 Msa0613860:CDS 55.0%
TGTCACAGCTTGTGGAGAGG+AGG - chr4_2:62742007-62742026 Msa0613860:CDS 55.0%
TCCCCTCAGGTGGGAAATCA+AGG + chr4_2:62742114-62742133 None:intergenic 55.0%
TGATTTCCCACCTGAGGGGA+AGG - chr4_2:62742114-62742133 Msa0613860:intron 55.0%
GCTTCCAAGTGAGGACTACG+TGG - chr4_2:62742256-62742275 Msa0613860:intron 55.0%
!! GGCTTTGTTTGGGAGTTCGG+AGG - chr4_2:62741360-62741379 Msa0613860:CDS 55.0%
TGTCACAGCTTGTGGAGAGG+AGG - chr4_2:62742007-62742026 Msa0613860:CDS 55.0%
TCCCCTCAGGTGGGAAATCA+AGG + chr4_2:62742114-62742133 None:intergenic 55.0%
TGATTTCCCACCTGAGGGGA+AGG - chr4_2:62742114-62742133 Msa0613860:intron 55.0%
GCTTCCAAGTGAGGACTACG+TGG - chr4_2:62742256-62742275 Msa0613860:intron 55.0%
TGTTTGGGAGTTCGGAGGGG+AGG - chr4_2:62741365-62741384 Msa0613860:CDS 60.0%
GTTTGGGAGTTCGGAGGGGA+GGG - chr4_2:62741366-62741385 Msa0613860:CDS 60.0%
TTTGGGAGTTCGGAGGGGAG+GGG - chr4_2:62741367-62741386 Msa0613860:CDS 60.0%
GGAGGGGAAGGAAGGGCTTT+GGG - chr4_2:62741383-62741402 Msa0613860:intron 60.0%
GAGGGGAAGGAAGGGCTTTG+GGG - chr4_2:62741384-62741403 Msa0613860:intron 60.0%
! AGGGGAAGGAAGGGCTTTGG+GGG - chr4_2:62741385-62741404 Msa0613860:intron 60.0%
GTGTCTCCTTCCCCTCAGGT+GGG + chr4_2:62742123-62742142 None:intergenic 60.0%
TGTGTCTCCTTCCCCTCAGG+TGG + chr4_2:62742124-62742143 None:intergenic 60.0%
ACCTGAGGGGAAGGAGACAC+AGG - chr4_2:62742123-62742142 Msa0613860:intron 60.0%
CCTGAGGGGAAGGAGACACA+GGG - chr4_2:62742124-62742143 Msa0613860:intron 60.0%
GAGGCCACGTAGTCCTCACT+TGG + chr4_2:62742263-62742282 None:intergenic 60.0%
TGTTTGGGAGTTCGGAGGGG+AGG - chr4_2:62741365-62741384 Msa0613860:CDS 60.0%
GTTTGGGAGTTCGGAGGGGA+GGG - chr4_2:62741366-62741385 Msa0613860:CDS 60.0%
TTTGGGAGTTCGGAGGGGAG+GGG - chr4_2:62741367-62741386 Msa0613860:CDS 60.0%
GGAGGGGAAGGAAGGGCTTT+GGG - chr4_2:62741383-62741402 Msa0613860:intron 60.0%
GAGGGGAAGGAAGGGCTTTG+GGG - chr4_2:62741384-62741403 Msa0613860:intron 60.0%
! AGGGGAAGGAAGGGCTTTGG+GGG - chr4_2:62741385-62741404 Msa0613860:intron 60.0%
GTGTCTCCTTCCCCTCAGGT+GGG + chr4_2:62742123-62742142 None:intergenic 60.0%
TGTGTCTCCTTCCCCTCAGG+TGG + chr4_2:62742124-62742143 None:intergenic 60.0%
ACCTGAGGGGAAGGAGACAC+AGG - chr4_2:62742123-62742142 Msa0613860:intron 60.0%
CCTGAGGGGAAGGAGACACA+GGG - chr4_2:62742124-62742143 Msa0613860:intron 60.0%
GAGGCCACGTAGTCCTCACT+TGG + chr4_2:62742263-62742282 None:intergenic 60.0%
TTCGGAGGGGAGGGGAAGGA+AGG - chr4_2:62741375-62741394 Msa0613860:CDS 65.0%
TCGGAGGGGAGGGGAAGGAA+GGG - chr4_2:62741376-62741395 Msa0613860:CDS 65.0%
GGGAGGGGAAGGAAGGGCTT+TGG - chr4_2:62741382-62741401 Msa0613860:intron 65.0%
!! GGGGAAGGAAGGGCTTTGGG+GGG - chr4_2:62741386-62741405 Msa0613860:intron 65.0%
CCCTGTGTCTCCTTCCCCTC+AGG + chr4_2:62742127-62742146 None:intergenic 65.0%
TTCGGAGGGGAGGGGAAGGA+AGG - chr4_2:62741375-62741394 Msa0613860:CDS 65.0%
TCGGAGGGGAGGGGAAGGAA+GGG - chr4_2:62741376-62741395 Msa0613860:CDS 65.0%
GGGAGGGGAAGGAAGGGCTT+TGG - chr4_2:62741382-62741401 Msa0613860:intron 65.0%
!! GGGGAAGGAAGGGCTTTGGG+GGG - chr4_2:62741386-62741405 Msa0613860:intron 65.0%
CCCTGTGTCTCCTTCCCCTC+AGG + chr4_2:62742127-62742146 None:intergenic 65.0%
GGAGTTCGGAGGGGAGGGGA+AGG - chr4_2:62741371-62741390 Msa0613860:CDS 70.0%
GGAGTTCGGAGGGGAGGGGA+AGG - chr4_2:62741371-62741390 Msa0613860:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 62740435 62742639 62740435 ID=Msa0613860;Name=Msa0613860
chr4_2 mRNA 62740435 62742639 62740435 ID=Msa0613860-mRNA-1;Parent=Msa0613860;Name=Msa0613860-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0.25|0.4|0.8|1|1|5|314|298
chr4_2 exon 62740435 62741141 62740435 ID=Msa0613860-mRNA-1:exon:17330;Parent=Msa0613860-mRNA-1
chr4_2 exon 62741341 62741400 62741341 ID=Msa0613860-mRNA-1:exon:17329;Parent=Msa0613860-mRNA-1
chr4_2 exon 62741914 62742030 62741914 ID=Msa0613860-mRNA-1:exon:17328;Parent=Msa0613860-mRNA-1
chr4_2 exon 62742133 62742204 62742133 ID=Msa0613860-mRNA-1:exon:17327;Parent=Msa0613860-mRNA-1
chr4_2 exon 62742385 62742639 62742385 ID=Msa0613860-mRNA-1:exon:17326;Parent=Msa0613860-mRNA-1
chr4_2 CDS 62742385 62742639 62742385 ID=Msa0613860-mRNA-1:cds;Parent=Msa0613860-mRNA-1
chr4_2 CDS 62742133 62742204 62742133 ID=Msa0613860-mRNA-1:cds;Parent=Msa0613860-mRNA-1
chr4_2 CDS 62741914 62742030 62741914 ID=Msa0613860-mRNA-1:cds;Parent=Msa0613860-mRNA-1
chr4_2 CDS 62741341 62741400 62741341 ID=Msa0613860-mRNA-1:cds;Parent=Msa0613860-mRNA-1
chr4_2 CDS 62740749 62741141 62740749 ID=Msa0613860-mRNA-1:cds;Parent=Msa0613860-mRNA-1
chr4_2 three_prime_UTR 62740435 62740748 62740435 ID=Msa0613860-mRNA-1:three_prime_utr;Parent=Msa0613860-mRNA-1
Gene Sequence

>Msa0613860

ATGCGTGACATCAGGTTTCACCTCTGGCCATACGTTAAGCTAATGATCATCTTCTGGCTCATCATACCGGACTTTGGACGAGCTTCTTATATTTATAATAAGCTTATTAATTCCATGAAACCGCAAGTAGTCACATGGAGGTTAAACAACTACTGGAGGAAGTGGTTTTGTAAGAAAGATAACTTTTTAATGCATGCAGAGAAATATATGAAAGAGAATGGAACTGAAGCCTTAGAGAAACTCATTGCCAACAAGAACACAATGTGTAGGCCTGATGCAGAAGCGACAAATGAAATTATGGCCACTGATAATAAAGAAATCCTAAAGTACTTAACGAGAGGGCTTGATCTAGTGCAGACAAATGGAGAAAGACTCCAAATTGAGCACAAAGATATAAAAGATTTGGAGGCAATTGAGAAAAAAGAAATTCCTGCTACCAAGCAACAAGGAAAGATGAAACTATATGGGAAACAAGTGGTTACAAATGTGAGCGACGATTCTGATAGAACCTATGCTAATATTGTGGCAAGTCAAACAGCATCATCAGCCGTAATAGAAACCAAAGGAACTGCTGAAAGTGTCACAGCTTGTGGAGAGGAGGTTCCTCAGAGTTCTACACAGAAGGCAGTGCAGAAAGAGTGGACTTGTGCTTTATGTTTGGTAACGGTTACGTGCGAGAAAACCTTGATTTCCCACCTGAGGGGAAGGAGACACAGGGAAACTATGGAAGCATTGAAAGCAAAGAAGCAACCTACCCTGCAAAAGAACCTATCAGAACCTATTAGGATGATTAATTCCAAAATAATATGTAAAGTCTGTAATATTATGCTTCCAAGTGAGGACTACGTGGCCTCTCACATAAAAGGGTGGAAGCACTTGTCTAATATTAAAAGTTGA
Protein sequence

>Msa0613860

MRDIRFHLWPYVKLMIIFWLIIPDFGRASYIYNKLINSMKPQVVTWRLNNYWRKWFCKKDNFLMHAEKYMKENGTEALEKLIANKNTMCRPDAEATNEIMATDNKEILKYLTRGLDLVQTNGERLQIEHKDIKDLEAIEKKEIPATKQQGKMKLYGKQVVTNVSDDSDRTYANIVASQTASSAVIETKGTAESVTACGEEVPQSSTQKAVQKEWTCALCLVTVTCEKTLISHLRGRRHRETMEALKAKKQPTLQKNLSEPIRMINSKIICKVCNIMLPSEDYVASHIKGWKHLSNIKS*