AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0095900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0095900 MtrunA17_Chr5g0398521 94.302 895 19 4 1 864 1 894 0.0 1710
Msa0095900 MtrunA17_Chr7g0245931 68.989 890 235 10 9 862 2 886 0.0 1217
Msa0095900 MtrunA17_Chr1g0182151 33.122 474 255 13 25 465 17 461 5.17e-57 212
Msa0095900 MtrunA17_Chr1g0152231 36.436 376 214 9 58 427 3 359 1.00e-56 209
Msa0095900 MtrunA17_Chr1g0195111 37.047 359 184 8 57 402 395 724 3.22e-55 207
Msa0095900 MtrunA17_Chr2g0327581 34.562 434 222 10 59 452 50 461 3.36e-55 207
Msa0095900 MtrunA17_Chr7g0271961 35.493 355 190 7 57 402 400 724 9.70e-54 202
Msa0095900 MtrunA17_Chr1g0192481 35.196 358 193 9 57 402 57 387 6.07e-53 194
Msa0095900 MtrunA17_Chr2g0322291 33.410 437 232 12 10 423 47 447 6.36e-53 201
Msa0095900 MtrunA17_Chr4g0045381 35.890 365 188 10 59 403 194 532 1.05e-52 200
Msa0095900 MtrunA17_Chr5g0447041 32.918 401 185 11 57 402 433 804 4.04e-51 194
Msa0095900 MtrunA17_Chr1g0191181 33.251 406 217 11 55 443 85 453 4.33e-51 190
Msa0095900 MtrunA17_Chr3g0102921 34.409 372 189 11 57 402 437 779 5.47e-51 194
Msa0095900 MtrunA17_Chr3g0122121 36.164 365 188 9 59 403 99 438 1.02e-50 194
Msa0095900 MtrunA17_Chr2g0312631 34.009 444 242 14 57 491 383 784 1.45e-50 192
Msa0095900 MtrunA17_Chr1g0178411 31.416 452 244 11 59 464 14 445 5.94e-50 191
Msa0095900 MtrunA17_Chr3g0132921 32.249 369 198 10 59 403 10 350 7.59e-50 184
Msa0095900 MtrunA17_Chr4g0069141 34.483 377 191 12 59 410 154 499 1.20e-49 191
Msa0095900 MtrunA17_Chr5g0411971 32.364 550 282 20 57 556 398 907 1.78e-49 189
Msa0095900 MtrunA17_Chr5g0421591 32.117 548 283 19 57 555 373 880 4.24e-49 187
Msa0095900 MtrunA17_Chr8g0377731 33.493 418 214 11 14 403 11 392 4.99e-49 188
Msa0095900 MtrunA17_Chr1g0193221 34.743 331 192 5 104 427 39 352 5.83e-49 188
Msa0095900 MtrunA17_Chr5g0421521 31.818 550 283 18 57 553 373 883 1.28e-48 186
Msa0095900 MtrunA17_Chr2g0280421 34.146 369 201 11 49 402 426 767 2.46e-48 184
Msa0095900 MtrunA17_Chr7g0266631 30.629 493 278 13 59 514 10 475 3.41e-48 185
Msa0095900 MtrunA17_Chr7g0257301 35.385 390 172 14 57 402 391 744 3.95e-48 185
Msa0095900 MtrunA17_Chr2g0307481 28.822 569 319 17 58 598 68 578 3.97e-48 181
Msa0095900 MtrunA17_Chr4g0062291 36.340 377 199 13 40 401 104 454 4.01e-48 182
Msa0095900 MtrunA17_Chr3g0134191 32.000 375 207 9 59 403 9 365 9.86e-48 184
Msa0095900 MtrunA17_Chr8g0369881 35.311 354 193 10 57 403 874 1198 1.79e-46 180
Msa0095900 MtrunA17_Chr4g0053211 31.383 376 212 10 59 403 13 373 1.91e-46 180
Msa0095900 MtrunA17_Chr1g0153061 32.267 375 206 9 59 403 9 365 2.15e-46 179
Msa0095900 MtrunA17_Chr1g0191851 33.156 377 210 11 57 419 146 494 3.67e-46 177
Msa0095900 MtrunA17_Chr5g0405181 34.184 392 213 11 47 427 13 370 4.36e-46 178
Msa0095900 MtrunA17_Chr5g0427481 32.432 370 197 10 59 403 18 359 5.14e-46 179
Msa0095900 MtrunA17_Chr5g0407791 35.196 358 188 10 57 403 888 1212 5.53e-46 179
Msa0095900 MtrunA17_Chr8g0372171 33.687 377 217 8 58 427 19 369 1.01e-45 177
Msa0095900 MtrunA17_Chr6g0483701 32.840 405 224 11 41 427 4 378 1.95e-45 176
Msa0095900 MtrunA17_Chr4g0035661 32.432 407 220 12 48 439 78 444 3.03e-45 176
Msa0095900 MtrunA17_Chr3g0145071 31.429 455 250 13 59 495 100 510 4.84e-45 176
Msa0095900 MtrunA17_Chr7g0272871 33.687 377 208 11 57 419 126 474 5.78e-45 173
Msa0095900 MtrunA17_Chr4g0042061 32.891 377 206 13 49 402 421 773 1.07e-43 170
Msa0095900 MtrunA17_Chr4g0070001 35.196 358 191 11 58 407 143 467 1.89e-43 171
Msa0095900 MtrunA17_Chr4g0036001 33.777 376 216 8 58 427 24 372 9.64e-43 167
Msa0095900 MtrunA17_Chr7g0258991 32.471 425 222 12 33 438 51 429 3.27e-42 166
Msa0095900 MtrunA17_Chr3g0142261 32.045 440 237 15 58 480 19 413 2.49e-41 164
Msa0095900 MtrunA17_Chr2g0319271 29.581 382 214 10 49 402 387 741 6.63e-40 158
Msa0095900 MtrunA17_Chr7g0238581 30.504 377 218 10 42 405 10 355 9.02e-40 156
Msa0095900 MtrunA17_Chr2g0331761 33.426 359 208 11 44 397 172 504 4.96e-38 152
Msa0095900 MtrunA17_Chr4g0049011 30.026 383 214 12 49 407 268 620 1.07e-37 150
Msa0095900 MtrunA17_Chr5g0445211 31.366 322 186 7 101 403 106 411 8.99e-37 149
Msa0095900 MtrunA17_Chr2g0295881 31.831 355 207 10 57 397 196 529 1.17e-35 145
Msa0095900 MtrunA17_Chr6g0485471 32.378 349 202 9 57 398 114 435 3.28e-35 143
Msa0095900 MtrunA17_Chr4g0067421 31.124 347 218 9 57 397 204 535 1.10e-34 142
Msa0095900 MtrunA17_Chr3g0101021 28.947 418 222 16 24 403 30 410 1.86e-34 142
Msa0095900 MtrunA17_Chr7g0269681 42.391 184 86 2 219 402 31 194 2.24e-33 135
Msa0095900 MtrunA17_Chr8g0367581 29.683 347 205 8 57 398 145 457 1.35e-30 130
Msa0095900 MtrunA17_Chr8g0386891 39.080 174 86 1 229 402 4 157 4.66e-28 117
Msa0095900 MtrunA17_Chr6g0484501 34.928 209 114 3 194 402 1 187 6.50e-25 104
Msa0095900 MtrunA17_Chr8g0390991 38.202 178 88 3 226 402 1 157 9.68e-22 100
Msa0095900 MtrunA17_Chr1g0187411 30.000 310 170 11 114 398 178 465 1.85e-21 100
Msa0095900 MtrunA17_Chr6g0470541 28.723 282 167 8 104 381 51 302 1.03e-20 98.2
Msa0095900 MtrunA17_Chr3g0142841 27.778 306 161 10 90 377 135 398 3.25e-20 96.7
Msa0095900 MtrunA17_Chr7g0269691 32.237 152 90 5 57 201 399 544 3.82e-15 79.3
Msa0095900 MtrunA17_Chr8g0390981 33.117 154 87 4 57 201 514 660 2.48e-14 77.0
Msa0095900 MtrunA17_Chr8g0386901 30.968 155 90 4 57 201 482 629 3.98e-13 73.2
Msa0095900 MtrunA17_Chr6g0484511 32.692 156 89 5 55 201 286 434 4.08e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0095900 AT1G12430.1 71.817 919 199 10 1 862 1 916 0.0 1283
Msa0095900 AT1G12430.2 71.739 920 199 11 1 862 1 917 0.0 1278
Msa0095900 AT1G01950.2 68.643 877 249 6 9 862 2 875 0.0 1197
Msa0095900 AT1G01950.1 67.562 894 247 7 9 862 2 892 0.0 1194
Msa0095900 AT1G01950.3 66.011 915 247 7 9 862 2 913 0.0 1187
Msa0095900 AT1G01950.4 68.127 753 208 5 140 862 1 751 0.0 1018
Msa0095900 AT3G54870.2 63.007 419 140 4 56 470 102 509 2.17e-171 525
Msa0095900 AT3G54870.2 41.401 471 220 9 438 855 584 1051 1.53e-91 312
Msa0095900 AT3G63480.2 36.338 355 192 8 59 402 4 335 2.43e-60 213
Msa0095900 AT3G63480.1 35.933 359 192 9 59 402 4 339 5.14e-59 209
Msa0095900 AT1G59540.1 33.105 438 252 11 58 485 3 409 5.31e-56 207
Msa0095900 AT2G28620.3 30.976 594 322 18 19 558 5 564 1.35e-55 208
Msa0095900 AT2G28620.2 30.976 594 322 18 19 558 5 564 1.35e-55 208
Msa0095900 AT2G28620.1 31.088 579 315 17 19 543 5 553 4.48e-55 207
Msa0095900 AT3G17360.2 34.867 413 210 12 49 432 159 541 5.77e-55 207
Msa0095900 AT3G17360.3 34.867 413 210 12 49 432 159 541 6.15e-55 207
Msa0095900 AT3G17360.1 34.867 413 210 12 49 432 159 541 6.36e-55 207
Msa0095900 AT3G44730.2 35.955 356 193 7 57 402 421 751 1.57e-54 206
Msa0095900 AT3G44730.3 35.955 356 193 7 57 402 421 751 1.57e-54 206
Msa0095900 AT3G44730.1 35.955 356 193 7 57 402 376 706 1.71e-54 205
Msa0095900 AT3G44730.4 35.955 356 193 7 57 402 376 706 1.71e-54 205
Msa0095900 AT5G27000.1 36.592 358 187 9 57 402 393 722 1.77e-54 205
Msa0095900 AT2G37420.1 31.676 543 303 13 59 560 49 564 4.03e-54 204
Msa0095900 AT2G37420.2 31.676 543 303 13 59 560 49 564 4.03e-54 204
Msa0095900 AT3G19050.1 36.712 365 185 11 59 403 194 532 1.36e-53 204
Msa0095900 AT2G47500.2 38.762 307 160 6 102 402 441 725 9.29e-53 199
Msa0095900 AT2G47500.1 38.762 307 160 6 102 402 441 725 1.17e-52 199
Msa0095900 AT1G09170.3 36.901 355 189 10 57 402 433 761 1.83e-52 197
Msa0095900 AT1G09170.7 36.901 355 189 10 57 402 433 761 1.83e-52 197
Msa0095900 AT1G09170.4 36.901 355 189 10 57 402 433 761 2.02e-52 197
Msa0095900 AT1G09170.2 36.901 355 189 10 57 402 433 761 2.09e-52 198
Msa0095900 AT3G45850.2 32.777 479 249 13 59 485 56 513 3.05e-52 198
Msa0095900 AT3G45850.1 32.777 479 249 13 59 485 56 513 3.05e-52 198
Msa0095900 AT1G09170.5 36.901 355 189 10 57 402 433 761 4.75e-52 197
Msa0095900 AT3G10310.1 35.933 359 187 8 57 402 362 690 6.04e-52 197
Msa0095900 AT3G10310.2 35.933 359 187 8 57 402 362 690 6.99e-52 197
Msa0095900 AT1G73860.2 36.464 362 188 11 55 402 423 756 1.36e-51 196
Msa0095900 AT1G18410.3 34.341 364 192 10 55 402 486 818 2.95e-51 195
Msa0095900 AT1G18410.2 34.341 364 192 10 55 402 486 818 2.95e-51 195
Msa0095900 AT5G47820.2 32.997 397 210 12 59 413 12 394 4.09e-51 195
Msa0095900 AT5G47820.1 32.997 397 210 12 59 413 12 394 4.09e-51 195
Msa0095900 AT1G73860.1 36.667 360 186 11 57 402 508 839 4.34e-51 194
Msa0095900 AT4G14150.1 36.240 367 182 11 59 403 92 428 4.93e-51 195
Msa0095900 AT1G72250.3 33.634 443 245 11 57 490 511 913 5.53e-51 195
Msa0095900 AT1G72250.4 33.634 443 245 11 57 490 510 912 5.68e-51 195
Msa0095900 AT1G72250.1 33.634 443 245 11 57 490 490 892 6.11e-51 194
Msa0095900 AT1G72250.2 33.634 443 245 11 57 490 499 901 7.00e-51 194
Msa0095900 AT3G23670.2 35.342 365 188 7 59 403 97 433 8.51e-51 193
Msa0095900 AT1G18410.4 34.530 362 190 10 57 402 631 961 1.13e-50 194
Msa0095900 AT3G23670.1 35.342 365 188 7 59 403 97 433 1.51e-50 194
Msa0095900 AT3G44050.1 34.080 402 199 11 49 423 90 452 1.53e-50 193
Msa0095900 AT2G22610.2 31.887 530 294 18 50 553 409 897 4.64e-50 191
Msa0095900 AT5G60930.3 32.527 372 208 9 59 403 7 362 5.33e-50 192
Msa0095900 AT5G60930.1 32.527 372 208 9 59 403 7 362 6.40e-50 191
Msa0095900 AT5G60930.2 32.527 372 208 9 59 403 7 362 6.75e-50 191
Msa0095900 AT1G18410.5 34.254 362 187 10 55 402 476 800 8.46e-50 191
Msa0095900 AT2G22610.1 33.703 451 242 13 50 484 409 818 1.14e-49 190
Msa0095900 AT2G22610.3 33.703 451 242 13 50 484 410 819 1.26e-49 190
Msa0095900 AT1G18410.1 34.444 360 185 10 57 402 631 953 2.90e-49 189
Msa0095900 AT1G18550.1 36.740 362 180 11 58 401 151 481 1.12e-48 185
Msa0095900 AT5G27550.2 35.556 360 187 9 57 403 131 458 1.75e-48 185
Msa0095900 AT5G27550.1 35.556 360 187 9 57 403 131 458 1.75e-48 185
Msa0095900 AT2G36200.2 34.171 398 214 10 59 430 13 388 2.19e-48 186
Msa0095900 AT2G36200.1 34.171 398 214 10 59 430 13 388 2.21e-48 186
Msa0095900 AT1G55550.1 32.464 422 232 11 57 461 90 475 3.38e-48 185
Msa0095900 AT1G63640.2 32.865 356 197 8 57 402 471 794 3.66e-48 186
Msa0095900 AT5G41310.1 34.551 356 180 10 57 402 421 733 9.64e-48 184
Msa0095900 AT1G63640.5 32.402 358 203 8 57 402 461 791 1.00e-47 184
Msa0095900 AT1G63640.1 32.402 358 203 8 57 402 471 801 1.05e-47 184
Msa0095900 AT1G63640.4 32.402 358 203 8 57 402 471 801 1.05e-47 184
Msa0095900 AT1G63640.3 32.402 358 203 8 57 402 471 801 1.09e-47 184
Msa0095900 AT3G10180.1 32.987 385 209 10 58 427 3 353 1.63e-47 184
Msa0095900 AT3G10180.2 32.987 385 209 10 58 427 3 353 1.68e-47 184
Msa0095900 AT1G09170.1 34.097 349 171 8 57 402 433 725 5.86e-46 179
Msa0095900 AT3G49650.1 32.385 457 244 15 61 489 17 436 8.52e-46 177
Msa0095900 AT3G54870.1 38.462 338 152 9 438 722 584 918 2.04e-45 177
Msa0095900 AT3G54870.3 38.462 338 152 9 438 722 583 917 2.43e-45 176
Msa0095900 AT4G27180.1 33.687 377 200 12 49 402 376 725 5.38e-45 174
Msa0095900 AT4G27180.2 33.687 377 200 12 49 402 376 725 5.38e-45 174
Msa0095900 AT3G50240.2 32.161 398 208 13 59 413 26 404 5.60e-45 175
Msa0095900 AT2G21380.2 34.177 395 201 13 53 427 99 454 7.58e-45 175
Msa0095900 AT2G21380.1 34.177 395 201 13 53 427 99 454 7.58e-45 175
Msa0095900 AT3G50240.1 32.161 398 208 12 59 413 26 404 7.96e-45 175
Msa0095900 AT1G09170.6 36.086 327 174 10 57 374 433 733 8.08e-45 173
Msa0095900 AT1G09170.8 36.086 327 174 10 57 374 433 733 8.08e-45 173
Msa0095900 AT3G50240.4 32.161 398 208 12 59 413 26 404 8.77e-45 175
Msa0095900 AT2G21300.2 33.506 385 217 9 52 427 18 372 9.40e-45 174
Msa0095900 AT2G21300.4 33.506 385 217 9 52 427 18 372 9.40e-45 174
Msa0095900 AT2G21300.3 33.506 385 217 9 52 427 18 372 9.40e-45 174
Msa0095900 AT2G21300.1 33.506 385 217 9 52 427 18 372 9.40e-45 174
Msa0095900 AT2G21300.5 33.506 385 217 9 52 427 18 372 9.40e-45 174
Msa0095900 AT5G66310.2 33.687 377 217 9 58 427 18 368 1.80e-44 174
Msa0095900 AT5G66310.3 33.687 377 217 9 58 427 18 368 1.80e-44 174
Msa0095900 AT5G66310.1 33.687 377 217 9 58 427 18 368 1.80e-44 174
Msa0095900 AT1G21730.1 31.981 419 223 13 59 457 76 452 1.98e-44 173
Msa0095900 AT4G39050.1 34.197 386 200 11 59 430 99 444 3.98e-44 173
Msa0095900 AT3G51150.1 32.861 423 237 11 58 460 17 412 4.86e-44 173
Msa0095900 AT3G51150.2 32.861 423 237 11 58 460 17 412 5.52e-44 172
Msa0095900 AT3G51150.4 32.861 423 237 11 58 460 17 412 5.52e-44 172
Msa0095900 AT3G51150.3 32.861 423 237 11 58 460 17 412 5.52e-44 172
Msa0095900 AT5G27950.1 34.505 313 167 8 104 403 119 406 1.04e-43 169
Msa0095900 AT5G54670.3 33.067 375 205 12 49 402 325 674 1.84e-43 169
Msa0095900 AT1G18370.1 33.245 379 214 10 58 427 31 379 2.18e-43 171
Msa0095900 AT4G38950.3 33.509 379 213 9 58 427 13 361 2.52e-43 170
Msa0095900 AT4G38950.5 33.509 379 213 9 58 427 13 361 2.52e-43 170
Msa0095900 AT4G38950.4 33.509 379 213 9 58 427 13 361 2.52e-43 170
Msa0095900 AT4G38950.1 33.509 379 213 9 58 427 13 361 2.52e-43 170
Msa0095900 AT4G38950.2 33.509 379 213 9 58 427 13 361 2.52e-43 170
Msa0095900 AT5G54670.1 33.067 375 205 12 49 402 385 734 3.17e-43 169
Msa0095900 AT5G54670.2 33.067 375 205 12 49 402 385 734 3.17e-43 169
Msa0095900 AT4G24170.1 32.987 385 213 11 58 432 6 355 2.87e-42 167
Msa0095900 AT4G24170.2 32.987 385 213 11 58 432 6 355 2.87e-42 167
Msa0095900 AT5G65930.3 33.983 359 191 11 57 403 893 1217 4.13e-42 167
Msa0095900 AT5G65930.1 33.983 359 191 11 57 403 886 1210 4.22e-42 167
Msa0095900 AT5G65930.2 33.983 359 191 11 57 403 887 1211 4.57e-42 167
Msa0095900 AT3G16060.1 28.759 532 326 17 57 565 168 669 2.75e-41 162
Msa0095900 AT3G43210.3 30.882 408 242 9 58 457 29 404 4.03e-41 163
Msa0095900 AT3G43210.5 30.882 408 242 9 58 457 29 404 4.03e-41 163
Msa0095900 AT3G43210.2 30.882 408 242 9 58 457 29 404 4.03e-41 163
Msa0095900 AT3G43210.4 30.882 408 242 9 58 457 29 404 4.03e-41 163
Msa0095900 AT3G43210.1 30.882 408 242 9 58 457 29 404 4.03e-41 163
Msa0095900 AT5G06670.5 32.648 389 210 11 59 433 67 417 1.27e-40 160
Msa0095900 AT5G06670.8 32.648 389 210 11 59 433 67 417 1.76e-40 160
Msa0095900 AT5G06670.4 32.648 389 210 11 59 433 67 417 1.76e-40 160
Msa0095900 AT5G06670.7 32.648 389 210 11 59 433 67 417 1.76e-40 160
Msa0095900 AT5G06670.2 32.648 389 210 11 59 433 67 417 1.76e-40 161
Msa0095900 AT5G06670.3 32.648 389 210 11 59 433 67 417 1.76e-40 161
Msa0095900 AT4G05190.1 33.438 320 168 9 104 402 475 770 3.87e-40 159
Msa0095900 AT4G05190.2 33.438 320 168 9 104 402 462 757 4.72e-40 159
Msa0095900 AT4G21270.1 34.062 320 166 9 104 402 478 773 8.55e-40 158
Msa0095900 AT3G12020.4 32.620 374 187 13 99 448 92 424 9.81e-40 159
Msa0095900 AT3G12020.1 32.620 374 187 13 99 448 92 424 9.81e-40 159
Msa0095900 AT3G12020.3 32.620 374 187 13 99 448 92 424 2.32e-39 158
Msa0095900 AT3G12020.2 32.620 374 187 13 99 448 92 424 2.32e-39 158
Msa0095900 AT1G59540.2 33.841 328 191 7 165 485 9 317 3.76e-39 156
Msa0095900 AT5G02370.1 29.365 378 216 9 59 423 21 360 9.34e-39 153
Msa0095900 AT5G06670.6 31.910 398 210 12 59 433 67 426 5.45e-38 154
Msa0095900 AT5G06670.1 31.910 398 210 12 59 433 67 426 5.45e-38 154
Msa0095900 AT3G16630.2 31.339 351 211 9 57 397 192 522 1.21e-35 145
Msa0095900 AT3G16630.1 31.339 351 211 9 57 397 192 522 1.21e-35 145
Msa0095900 AT3G50240.3 33.333 312 154 9 144 413 3 302 1.82e-33 139
Msa0095900 AT3G20150.1 32.000 350 194 12 104 427 136 467 1.05e-32 137
Msa0095900 AT3G20150.2 32.000 350 194 12 104 427 136 467 1.17e-32 137
Msa0095900 AT5G42490.1 35.034 294 154 8 58 344 9 272 5.26e-30 128
Msa0095900 AT5G42490.2 35.034 294 154 8 58 344 9 272 5.97e-30 128
Msa0095900 AT5G65460.1 27.007 548 322 22 57 580 137 630 1.72e-28 124
Msa0095900 AT5G65460.6 27.007 548 322 22 57 580 137 630 1.86e-28 123
Msa0095900 AT5G65460.4 27.007 548 322 22 57 580 137 630 1.91e-28 124
Msa0095900 AT5G65460.2 27.007 548 322 22 57 580 137 630 2.43e-28 123
Msa0095900 AT5G65460.3 26.860 551 326 22 57 580 137 637 3.50e-28 122
Msa0095900 AT5G27950.2 32.540 252 137 6 165 403 9 240 3.76e-28 119
Msa0095900 AT4G14330.1 28.256 407 228 12 9 398 5 364 8.46e-27 118
Msa0095900 AT5G10470.1 27.387 398 233 13 57 442 141 494 3.06e-25 113
Msa0095900 AT5G10470.2 27.387 398 233 13 57 442 141 494 3.06e-25 113
Msa0095900 AT3G51150.5 35.102 245 131 5 229 460 30 259 3.76e-24 109
Msa0095900 AT5G23910.2 26.429 280 171 8 102 380 57 302 2.37e-18 90.5
Msa0095900 AT5G23910.1 26.429 280 171 8 102 380 53 298 2.76e-18 90.5
Msa0095900 AT5G65460.5 25.672 409 253 16 184 580 15 384 2.18e-14 78.2
Msa0095900 AT1G20060.9 27.597 308 171 11 88 378 153 425 1.66e-13 75.1
Msa0095900 AT1G20060.5 27.597 308 171 11 88 378 153 425 1.67e-13 75.1
Msa0095900 AT1G20060.3 27.597 308 171 11 88 378 153 425 1.80e-13 75.1
Msa0095900 AT1G20060.2 27.597 308 171 11 88 378 153 425 1.81e-13 75.1
Msa0095900 AT1G20060.4 27.597 308 171 11 88 378 153 425 1.85e-13 75.1
Msa0095900 AT1G20060.6 27.597 308 171 11 88 378 153 425 1.92e-13 75.1
Msa0095900 AT1G20060.8 27.597 308 171 11 88 378 153 425 1.97e-13 75.1
Msa0095900 AT1G20060.10 27.597 308 171 11 88 378 153 425 1.97e-13 75.1
Msa0095900 AT1G20060.7 27.597 308 171 11 88 378 153 425 2.29e-13 74.7

Find 233 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATGCTTGATTTCATATT+AGG 0.183800 1_3:-1316520 None:intergenic
CGAAAAGTATTGTTTATCTT+TGG 0.217221 1_3:-1320421 None:intergenic
CTTGGGCCATAATGAGTTCT+TGG 0.225203 1_3:-1319297 None:intergenic
TGCAGGTGCTATTGCAAATT+TGG 0.228956 1_3:+1319150 Msa0095900:CDS
ACTTCACTTGTTATTACTAT+TGG 0.233615 1_3:+1315636 Msa0095900:CDS
ATAAGCTACAAACAGAATTA+AGG 0.234499 1_3:+1319674 Msa0095900:CDS
CAAAGAAAGATTGATGGATT+TGG 0.240065 1_3:-1314953 None:intergenic
TAATGAAACATCACCAGTTT+TGG 0.247648 1_3:-1314198 None:intergenic
TCGTTGACTTGATTAAATTA+TGG 0.255517 1_3:-1320557 None:intergenic
TTTCTCTTTGTAACAAATCT+AGG 0.270928 1_3:+1320458 Msa0095900:three_prime_UTR
GCTTCTCATTCAAGTGAAAA+TGG 0.276825 1_3:+1314504 Msa0095900:CDS
ATTCCCATGTCAGCTTTATA+TGG 0.278597 1_3:+1314118 Msa0095900:intron
CAAACTCTTCGCATGGTTGC+TGG 0.292182 1_3:+1319367 Msa0095900:CDS
CGGTTGTTTCAAAGAGGTTC+TGG 0.292727 1_3:-1312527 None:intergenic
ACATATGGTCAAATCATTAA+AGG 0.301174 1_3:+1314536 Msa0095900:CDS
CTCATTTCGGTTTGGAAAGC+GGG 0.314386 1_3:-1320338 None:intergenic
AATGCAAGAGATATGATTAA+AGG 0.315196 1_3:+1320227 Msa0095900:CDS
ATAACGAAGCCTCGTCAATT+AGG 0.318051 1_3:+1320070 Msa0095900:CDS
TAAAGCTTAGGAAGAACAAT+TGG 0.319628 1_3:+1313088 Msa0095900:CDS
AAGGACTTGTTTGGTTGATT+TGG 0.319657 1_3:-1312404 None:intergenic
GCTACTGATTCTTCCGCATT+TGG 0.321189 1_3:-1312916 None:intergenic
TTGGTTGTTGTAGATCTTGC+TGG 0.332707 1_3:+1314582 Msa0095900:CDS
AATCTCAGTCTCATATTTGC+AGG 0.333512 1_3:+1313948 Msa0095900:CDS
CAGCTGCATTCTTCAGGAAA+TGG 0.334177 1_3:+1318450 Msa0095900:CDS
AAGCATCAGCTGCATTCTTC+AGG 0.335130 1_3:+1318444 Msa0095900:CDS
AAAGTATCAGAAAGAATATA+TGG 0.345818 1_3:+1316441 Msa0095900:CDS
CAATCTTTCTTTGAGTGCAC+TGG 0.349245 1_3:+1314963 Msa0095900:CDS
TGGCTACAATGGGACAATTA+TGG 0.350136 1_3:+1313795 Msa0095900:CDS
CTGGTCCACTTGCTAGCTTC+TGG 0.351854 1_3:+1320592 Msa0095900:three_prime_UTR
TATGAATATGAATATGAATA+TGG 0.356616 1_3:-1312373 None:intergenic
CACAGCTGCACGTGGAATAA+TGG 0.369260 1_3:+1313876 Msa0095900:CDS
TACAATGGCTATGTTATCAT+TGG 0.372571 1_3:-1314168 None:intergenic
AGCTGCATTCTTCAGGAAAT+GGG 0.375152 1_3:+1318451 Msa0095900:CDS
ATGCAAGAGATATGATTAAA+GGG 0.379585 1_3:+1320228 Msa0095900:CDS
ACAGCTACTCTAACTCTTCC+AGG 0.383203 1_3:-1312880 None:intergenic
AAACTCTTCGCATGGTTGCT+GGG 0.383402 1_3:+1319368 Msa0095900:CDS
GGGTTTACATTTCTAACAAT+TGG 0.386737 1_3:-1320779 None:intergenic
GAGCTACTCTAATCGAGATT+AGG 0.389360 1_3:+1314225 Msa0095900:CDS
GTCAAAGACCATCATACTTC+TGG 0.390437 1_3:+1312604 Msa0095900:CDS
TTTGTTGAACTACTAAGATT+AGG 0.390962 1_3:+1314260 Msa0095900:CDS
TCAAAGAGCTTGCCTATTGA+AGG 0.391593 1_3:-1318480 None:intergenic
ACATTAATTCATTTCACTTC+AGG 0.391709 1_3:-1312298 None:intergenic
TACTATAATGTTTGGACAAA+GGG 0.393298 1_3:+1315692 Msa0095900:CDS
TAAGCTACAAACAGAATTAA+GGG 0.397299 1_3:+1319675 Msa0095900:CDS
AACCAACCAAGAACTCATTA+TGG 0.398513 1_3:+1319291 Msa0095900:CDS
AGAATTAGATAAACTCATAA+TGG 0.400913 1_3:+1316021 Msa0095900:CDS
CACCCGCATACGCCTCATTT+CGG 0.404224 1_3:-1320351 None:intergenic
GACAGAGTGCAAGCTCAATA+TGG 0.408065 1_3:-1320095 None:intergenic
GTCTTTGACGGCGCCGGTGG+TGG 0.413330 1_3:-1312590 None:intergenic
GGTGCGGCGTTGAGTTGGTT+TGG 0.413429 1_3:-1312566 None:intergenic
CATTAAAGGCACCTATTGTT+CGG 0.416077 1_3:+1314550 Msa0095900:CDS
AGAAGCATCTCTTCCTTTGA+CGG 0.417460 1_3:-1314487 None:intergenic
AAGAAACTATGTAGATTCAT+TGG 0.425167 1_3:+1316126 Msa0095900:CDS
AGATTGTTACGTGATTCATT+TGG 0.425274 1_3:+1315051 Msa0095900:CDS
TGTCTATGTTACAGCTGAAA+AGG 0.427456 1_3:+1313064 Msa0095900:intron
TGCACTCAAAGAAAGATTGA+TGG 0.427729 1_3:-1314959 None:intergenic
AACTTGGCTTTCCGAACAAT+AGG 0.427742 1_3:-1314561 None:intergenic
ACTGGTAAAACTTATACTCT+TGG 0.429759 1_3:+1313835 Msa0095900:CDS
ATTGCTAATCTCTGTGGAAA+TGG 0.432405 1_3:+1319394 Msa0095900:CDS
ACTTGATACAGAAACAAATC+AGG 0.433561 1_3:+1319045 Msa0095900:intron
TGGAATAATGGTGCGAGCTA+TGG 0.434779 1_3:+1313888 Msa0095900:CDS
ACTGCTAGTACTATAATGTT+TGG 0.436976 1_3:+1315684 Msa0095900:CDS
ACCTGCAGCAACTCTAAGTA+TGG 0.438359 1_3:-1319134 None:intergenic
AAGAGTCTTTATGTCTTCTC+TGG 0.438460 1_3:-1320291 None:intergenic
AGCTACTCTAATCGAGATTA+GGG 0.439595 1_3:+1314226 Msa0095900:CDS
ACTTATACTCTTGGAAGACT+TGG 0.445016 1_3:+1313844 Msa0095900:CDS
GCAACCTGCGCATGCACATC+AGG 0.445972 1_3:-1319745 None:intergenic
TTTGACGGCGCCGGTGGTGG+TGG 0.446348 1_3:-1312587 None:intergenic
ATTGTAGAAGATCCCAAAAC+TGG 0.446416 1_3:+1314185 Msa0095900:CDS
GCAACCATGCGAAGAGTTTG+TGG 0.448992 1_3:-1319364 None:intergenic
CAACGCCGCACCACCACCAC+CGG 0.449332 1_3:+1312577 Msa0095900:CDS
AGCTGAAAAGGTTAAAGCTT+AGG 0.450018 1_3:+1313076 Msa0095900:intron
GGCCATAATGAGTTCTTGGT+TGG 0.450723 1_3:-1319293 None:intergenic
TTCGGTTTGGAAAGCGGGGA+TGG 0.453434 1_3:-1320333 None:intergenic
TAGAAGTCATGCTATTCTAA+TGG 0.455002 1_3:+1314331 Msa0095900:CDS
GTGGTGGTGCGGCGTTGAGT+TGG 0.455963 1_3:-1312571 None:intergenic
TAACCTTCTGCAGAGTGTAC+TGG 0.456689 1_3:+1313771 Msa0095900:intron
AATGGGGAGAAGCCTTCAAT+AGG 0.456977 1_3:+1318468 Msa0095900:CDS
AATGCAGCTGATGCTTAACT+TGG 0.458404 1_3:-1318437 None:intergenic
AGCATGACTTCTAGAAGATT+CGG 0.461557 1_3:-1314321 None:intergenic
ATTACAAAAGCTTATCAAGA+AGG 0.462145 1_3:+1315990 Msa0095900:CDS
TCAACGAGGTGGTGTCTCTC+TGG 0.464061 1_3:+1320573 Msa0095900:three_prime_UTR
TGGACCCTCACCACGGCATA+GGG 0.464091 1_3:+1315656 Msa0095900:CDS
ATGGCTATGTTATCATTGGC+AGG 0.467505 1_3:-1314164 None:intergenic
CTTATACTCTTGGAAGACTT+GGG 0.469991 1_3:+1313845 Msa0095900:CDS
ATTGCAAATTTGGCAATGAA+TGG 0.470028 1_3:+1319160 Msa0095900:CDS
GCCTATGGACAGACTGGTAC+TGG 0.472165 1_3:+1313817 Msa0095900:CDS
AATGGGACAATTATGGCCTA+TGG 0.472526 1_3:+1313802 Msa0095900:CDS
TTGTTACGTGATTCATTTGG+AGG 0.474437 1_3:+1315054 Msa0095900:CDS
TCGAGGATGGTGCTCTTCCA+TGG 0.474867 1_3:+1320031 Msa0095900:CDS
AAGACAGCAGAAAGCATTTG+AGG 0.476894 1_3:+1316051 Msa0095900:CDS
GCATACGCCTCATTTCGGTT+TGG 0.477143 1_3:-1320346 None:intergenic
GTGCATCTTGTAGGCTATGA+AGG 0.484109 1_3:+1315934 Msa0095900:intron
AAATGGAAATCATTCACATA+TGG 0.484830 1_3:+1314521 Msa0095900:CDS
GTAAGCTTTGAGTCACGAAA+TGG 0.485424 1_3:-1315027 None:intergenic
GCTTTATATGGAGACTATAC+AGG 0.485810 1_3:+1314130 Msa0095900:intron
TGTACACAGACCTCCACAAC+AGG 0.486328 1_3:-1313189 None:intergenic
TCAGAACGAATTGACAAATC+AGG 0.486551 1_3:+1314606 Msa0095900:CDS
TGGGTTCTTGTATTCCATCA+TGG 0.489112 1_3:+1320529 Msa0095900:three_prime_UTR
GAAGAGCACCATCCTCGATA+AGG 0.491452 1_3:-1320026 None:intergenic
GAAGAGTTAGAGTAGCTGTT+AGG 0.493082 1_3:+1312884 Msa0095900:CDS
TTGGACCCTCACCACGGCAT+AGG 0.493906 1_3:+1315655 Msa0095900:CDS
AGTCACATCTGTAGCGGTTG+CGG 0.494069 1_3:+1312322 Msa0095900:five_prime_UTR
GGAAAACATGATAAAATTGA+AGG 0.494160 1_3:+1315958 Msa0095900:CDS
CATCAGAAAGAGAAACTTGA+AGG 0.498488 1_3:+1317222 Msa0095900:CDS
GGGGAGGATTGTAGAAGCGG+GGG 0.499945 1_3:+1319066 Msa0095900:CDS
CTCTCCCCTATGCCGTGGTG+AGG 0.500806 1_3:-1315661 None:intergenic
GGAGGATTGTAGAAGCGGGG+GGG 0.505598 1_3:+1319068 Msa0095900:CDS
ACTGGTGATGTTTCATTACC+TGG 0.505617 1_3:+1314203 Msa0095900:CDS
TTTGTATATGAAATAAATAG+AGG 0.507101 1_3:+1320627 Msa0095900:three_prime_UTR
ACTGATTCTTCCGCATTTGG+TGG 0.507240 1_3:-1312913 None:intergenic
AATCTTTCTTTGAGTGCACT+GGG 0.507638 1_3:+1314964 Msa0095900:CDS
TTATTATTATTATTGTTTGG+TGG 0.508481 1_3:-1312441 None:intergenic
TTCTAAGAAAAGCCGCTGAA+GGG 0.513793 1_3:+1316999 Msa0095900:CDS
AAGATCTACAACAACCAACT+TGG 0.514668 1_3:-1314577 None:intergenic
GATGAATCAACGTAAGAATG+AGG 0.514770 1_3:+1316495 Msa0095900:CDS
AGGTGGTATCAAGGCACTGC+TGG 0.514995 1_3:+1319702 Msa0095900:CDS
ATCAAAACTTCATAAGATGT+TGG 0.516179 1_3:+1317188 Msa0095900:CDS
AAAGCTTAGGAAGAACAATT+GGG 0.517608 1_3:+1313089 Msa0095900:CDS
TCTCCCCTATGCCGTGGTGA+GGG 0.524956 1_3:-1315660 None:intergenic
AACCGAAATGAGGCGTATGC+GGG 0.525426 1_3:+1320349 Msa0095900:CDS
CATTTGAGGATGAGATTGAA+AGG 0.528637 1_3:+1316065 Msa0095900:CDS
GTAGTTCAACAAAACTCTGC+TGG 0.531738 1_3:-1314250 None:intergenic
GGGAGGATTGTAGAAGCGGG+GGG 0.531993 1_3:+1319067 Msa0095900:CDS
CTTCTAAGAAAAGCCGCTGA+AGG 0.532026 1_3:+1316998 Msa0095900:CDS
AAGGGGTGAAGGTGGTATCA+AGG 0.533688 1_3:+1319693 Msa0095900:CDS
TCAAACAAATAAAATAAAGA+TGG 0.535093 1_3:+1312234 None:intergenic
TGAGATTGAATCAGTTTCCA+AGG 0.536875 1_3:-1313932 None:intergenic
GTGTCGTGTAGAGTGTTGTT+CGG 0.537559 1_3:+1312269 Msa0095900:five_prime_UTR
TGCAAGAGATATGATTAAAG+GGG 0.538502 1_3:+1320229 Msa0095900:CDS
AAACTCTAGACAAGTGTTCG+TGG 0.541508 1_3:+1320509 Msa0095900:three_prime_UTR
GTGTACTGGATGGCTACAAT+GGG 0.542994 1_3:+1313785 Msa0095900:CDS
AAATTATGGCCATTCCATGA+TGG 0.543565 1_3:-1320543 None:intergenic
AAACTATGTAGATTCATTGG+AGG 0.544562 1_3:+1316129 Msa0095900:CDS
AGTGTACTGGATGGCTACAA+TGG 0.549262 1_3:+1313784 Msa0095900:CDS
AGGGGAGGATTGTAGAAGCG+GGG 0.551903 1_3:+1319065 Msa0095900:CDS
AACTCTTCGCATGGTTGCTG+GGG 0.552878 1_3:+1319369 Msa0095900:CDS
TCATAAGATGTTGGAAGATG+AGG 0.554642 1_3:+1317197 Msa0095900:CDS
TTGTAACAAATCTAGGTGGA+TGG 0.555113 1_3:+1320465 Msa0095900:three_prime_UTR
AGAAGTATGATGGTCTTTGA+CGG 0.556422 1_3:-1312602 None:intergenic
CAGGGGAGGATTGTAGAAGC+GGG 0.556439 1_3:+1319064 Msa0095900:CDS
TTGCTACAACTTTCACAGCA+TGG 0.557304 1_3:-1318673 None:intergenic
AGATCTTTCCTTATCGAGGA+TGG 0.557455 1_3:+1320018 Msa0095900:CDS
CGTGTAGAGTGTTGTTCGGA+AGG 0.558076 1_3:+1312273 Msa0095900:five_prime_UTR
GTACTATAATGTTTGGACAA+AGG 0.560091 1_3:+1315691 Msa0095900:CDS
TCTTGTATTCCATCATGGAA+TGG 0.562056 1_3:+1320534 Msa0095900:three_prime_UTR
AGTTTGTGGATCTTCAGCAT+TGG 0.563517 1_3:-1319350 None:intergenic
CGCTGAACTAAAACAGTCAG+AGG 0.563539 1_3:+1317048 Msa0095900:CDS
CGGCGCCGGTGGTGGTGGTG+CGG 0.563748 1_3:-1312582 None:intergenic
GTTTGCTTAATAGGAAGTGA+AGG 0.566064 1_3:+1314913 Msa0095900:intron
TATTGTTCGGAAAGCCAAGT+TGG 0.567019 1_3:+1314563 Msa0095900:CDS
ATTATTTGTTTCCCCTTCAG+CGG 0.567037 1_3:-1317011 None:intergenic
ATCTCGATTAGAGTAGCTCC+AGG 0.568548 1_3:-1314221 None:intergenic
TGTGGCTAGGCCTGTTGTGG+AGG 0.570413 1_3:+1313179 Msa0095900:CDS
AGAACTTACCAGAAGTATGA+TGG 0.572400 1_3:-1312612 None:intergenic
CCGCTTTCCAAACCGAAATG+AGG 0.573296 1_3:+1320339 Msa0095900:CDS
GCAAGTAGTAGTAACAGAAA+CGG 0.575602 1_3:+1312487 Msa0095900:CDS
AGTTGTGGCTAGGCCTGTTG+TGG 0.577383 1_3:+1313176 Msa0095900:CDS
GGTGGTATCAAGGCACTGCT+GGG 0.578822 1_3:+1319703 Msa0095900:CDS
CCTCATTTCGGTTTGGAAAG+CGG 0.579269 1_3:-1320339 None:intergenic
AAACCGAAATGAGGCGTATG+CGG 0.581554 1_3:+1320348 Msa0095900:CDS
ACCATACTTAGAGTTGCTGC+AGG 0.582269 1_3:+1319133 Msa0095900:CDS
AAAACGTGTTTACGAAGTTG+TGG 0.584021 1_3:+1313161 Msa0095900:CDS
TAGGCTGCGGCCACCAAATG+CGG 0.584878 1_3:+1312903 Msa0095900:CDS
ATAGGCAAGCTCTTTGAGCA+AGG 0.585528 1_3:+1318486 Msa0095900:CDS
CAAGAACTCATTATGGCCCA+AGG 0.586573 1_3:+1319298 Msa0095900:CDS
AACTCTAGACAAGTGTTCGT+GGG 0.587135 1_3:+1320510 Msa0095900:three_prime_UTR
CTTAGGAAGAACAATTGGGA+TGG 0.587403 1_3:+1313093 Msa0095900:CDS
AAACATGATAAAATTGAAGG+AGG 0.587553 1_3:+1315961 Msa0095900:CDS
CTTGATACAGAAACAAATCA+GGG 0.587748 1_3:+1319046 Msa0095900:intron
TCTAAGAAAAGCCGCTGAAG+GGG 0.587837 1_3:+1317000 Msa0095900:CDS
TACTCTTGGAAGACTTGGGG+AGG 0.588497 1_3:+1313849 Msa0095900:CDS
AAGTATGGTCTCATCTTGTG+TGG 0.590362 1_3:-1319119 None:intergenic
GTAGCAAATCTAGCTGCTGA+AGG 0.593032 1_3:+1318689 Msa0095900:CDS
TTAGAGTAGCTGTTAGGCTG+CGG 0.593818 1_3:+1312890 Msa0095900:CDS
ATAATGTCCACCTTCTCTCA+AGG 0.595291 1_3:+1312460 Msa0095900:exon
TGGAAGATCTTTCCTTATCG+AGG 0.596071 1_3:+1320014 Msa0095900:CDS
GGTTTGGAAAGCGGGGATGG+AGG 0.596875 1_3:-1320330 None:intergenic
ATTATGGCCTATGGACAGAC+TGG 0.597150 1_3:+1313811 Msa0095900:CDS
ACATCCTGATGTGCATGCGC+AGG 0.599789 1_3:+1319741 Msa0095900:CDS
ACCAGTACCAGTCTGTCCAT+AGG 0.601701 1_3:-1313818 None:intergenic
ACTTGCACCACCTTGAGAGA+AGG 0.602744 1_3:-1312470 None:intergenic
TAATATGAAATCAAGCATAG+AGG 0.602783 1_3:+1316522 Msa0095900:CDS
TGACGACGGTTGTTTCAAAG+AGG 0.602887 1_3:-1312533 None:intergenic
TGCACCACCTTGAGAGAAGG+TGG 0.603420 1_3:-1312467 None:intergenic
ATGATGGTCTTTGACGGCGC+CGG 0.603573 1_3:-1312596 None:intergenic
GTGTTTACGAAGTTGTGGCT+AGG 0.604931 1_3:+1313166 Msa0095900:CDS
ATGGTCTTTGACGGCGCCGG+TGG 0.606612 1_3:-1312593 None:intergenic
CAAACAGAATTAAGGGGTGA+AGG 0.610483 1_3:+1319682 Msa0095900:CDS
TAGCTACTGAAGCACAGCAT+CGG 0.611184 1_3:+1316089 Msa0095900:CDS
TATCAAGGCACTGCTGGGAA+TGG 0.611567 1_3:+1319708 Msa0095900:CDS
CTCTTTGTAACAAATCTAGG+TGG 0.611895 1_3:+1320461 Msa0095900:three_prime_UTR
TTATACTCTTGGAAGACTTG+GGG 0.612743 1_3:+1313846 Msa0095900:CDS
TCAGGGGAGGATTGTAGAAG+CGG 0.615658 1_3:+1319063 Msa0095900:CDS
ACATGCCAGAAGCTAGCAAG+TGG 0.616758 1_3:-1320597 None:intergenic
CTCTGTCATTTAGCACAACA+CGG 0.622977 1_3:+1320111 Msa0095900:CDS
CATGTAAAGAGATCCGTCAA+AGG 0.624521 1_3:+1314474 Msa0095900:CDS
ATGCAGCTGATGCTTAACTT+GGG 0.627475 1_3:-1318436 None:intergenic
AGAACTCATTATGGCCCAAG+GGG 0.629592 1_3:+1319300 Msa0095900:CDS
ATTTCCACAGAGATTAGCAA+TGG 0.630537 1_3:-1319392 None:intergenic
AGATCCACAAACTCTTCGCA+TGG 0.631356 1_3:+1319360 Msa0095900:CDS
TGGCTATGTTATCATTGGCA+GGG 0.632662 1_3:-1314163 None:intergenic
ACAGAATTAAGGGGTGAAGG+TGG 0.635776 1_3:+1319685 Msa0095900:CDS
AAGAACTCATTATGGCCCAA+GGG 0.636230 1_3:+1319299 Msa0095900:CDS
GCAGTCTCTCCCCTATGCCG+TGG 0.637582 1_3:-1315666 None:intergenic
TCATTTCGGTTTGGAAAGCG+GGG 0.638510 1_3:-1320337 None:intergenic
AAGCTACAAACAGAATTAAG+GGG 0.647749 1_3:+1319676 Msa0095900:CDS
GGGGCCATTGCTAATCTCTG+TGG 0.650933 1_3:+1319388 Msa0095900:CDS
CATTGTATAGGGTTAAAGAG+TGG 0.651485 1_3:+1319994 Msa0095900:intron
GCTGCATTCTTCAGGAAATG+GGG 0.652139 1_3:+1318452 Msa0095900:CDS
GTTTCGTATTTGCAGCAAAG+CGG 0.652997 1_3:-1314292 None:intergenic
GAGTCAAGAGCATCTAGTCA+AGG 0.655543 1_3:+1319796 Msa0095900:CDS
GAGGAAGACACAGCTGCACG+TGG 0.662537 1_3:+1313868 Msa0095900:CDS
GCAAGAGATATGATTAAAGG+GGG 0.666103 1_3:+1320230 Msa0095900:CDS
TGAACTACTAAGATTAGGAG+AGG 0.666513 1_3:+1314265 Msa0095900:CDS
AGCACAGCATCGGATATCTG+AGG 0.671733 1_3:+1316099 Msa0095900:CDS
ATACAGAAACAAATCAGGGG+AGG 0.672215 1_3:+1319050 Msa0095900:intron
AATGTGAGTCACATCTGTAG+CGG 0.677028 1_3:+1312316 Msa0095900:five_prime_UTR
TTGGACTTGACATTTGACGA+CGG 0.678412 1_3:-1312547 None:intergenic
CTGTGTTGAATTACAGCCTG+AGG 0.682097 1_3:+1312957 Msa0095900:CDS
GTGCATGCGCAGGTTGCTCG+AGG 0.683277 1_3:+1319751 Msa0095900:CDS
CTTCTGCAGAGTGTACTGGA+TGG 0.686397 1_3:+1313775 Msa0095900:intron
ATCTTTCTTTGAGTGCACTG+GGG 0.688498 1_3:+1314965 Msa0095900:CDS
CATCTTGTAGGCTATGAAGG+TGG 0.699733 1_3:+1315937 Msa0095900:intron
ATGTCCACCTTCTCTCAAGG+TGG 0.700289 1_3:+1312463 Msa0095900:CDS
TTACTATTGGACCCTCACCA+CGG 0.701192 1_3:+1315649 Msa0095900:CDS
ATTTAATCAAGTCAACGAGG+TGG 0.703735 1_3:+1320562 Msa0095900:three_prime_UTR
GGACCCTCACCACGGCATAG+GGG 0.711878 1_3:+1315657 Msa0095900:CDS
AATATGGCGCCTAATTGACG+AGG 0.717183 1_3:-1320079 None:intergenic
TTGATACAGAAACAAATCAG+GGG 0.718300 1_3:+1319047 Msa0095900:intron
AAATGCGGAAGAATCAGTAG+CGG 0.726543 1_3:+1312918 Msa0095900:CDS
GAACTCATTATGGCCCAAGG+GGG 0.739076 1_3:+1319301 Msa0095900:CDS
ATAATTTAATCAAGTCAACG+AGG 0.826637 1_3:+1320559 Msa0095900:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATTATTATTATTATTGTT+TGG - chr1_3:1312447-1312466 None:intergenic 10.0%
!! TGTAAAAAAAAAAAAAAATG+GGG + chr1_3:1313262-1313281 Msa0095900:intron 10.0%
!! AGATTTATAAAATTAAAGTA+AGG - chr1_3:1314733-1314752 None:intergenic 10.0%
!!! AATAGTTATTTTTTTTTTTG+AGG + chr1_3:1320710-1320729 Msa0095900:three_prime_UTR 10.0%
!! TATGAATATGAATATGAATA+TGG - chr1_3:1312376-1312395 None:intergenic 15.0%
!! TTATTATTATTATTGTTTGG+TGG - chr1_3:1312444-1312463 None:intergenic 15.0%
!! TTAAACATAGCATATAATTA+CGG - chr1_3:1312733-1312752 None:intergenic 15.0%
!! AATAAACAAACGAAAAAAAA+TGG - chr1_3:1313003-1313022 None:intergenic 15.0%
!!! CTTAGCAAAAAAATATATTT+TGG + chr1_3:1313973-1313992 Msa0095900:intron 15.0%
!!! TAAAAGTACTATATCTAAAT+TGG - chr1_3:1314008-1314027 None:intergenic 15.0%
!!! ATTTCTATTTTTAATGTCAT+TGG + chr1_3:1314420-1314439 Msa0095900:intron 15.0%
!!! TAGTTATTTTGTTAACTTTT+TGG - chr1_3:1315255-1315274 None:intergenic 15.0%
!! ACAATGAAATTATTTATCTA+TGG - chr1_3:1315497-1315516 None:intergenic 15.0%
!!! TGATTTTTTTCTTACAAAAA+AGG - chr1_3:1317711-1317730 None:intergenic 15.0%
!! AATATCTCATTTATAAAACA+AGG - chr1_3:1317756-1317775 None:intergenic 15.0%
!! CTTTGTGATAAAATAAAATA+AGG - chr1_3:1317802-1317821 None:intergenic 15.0%
!!! CTTATTTTATTTTATCACAA+AGG + chr1_3:1317800-1317819 Msa0095900:intron 15.0%
!! ATAAGAATATTTATTCTATC+AGG - chr1_3:1318596-1318615 None:intergenic 15.0%
!! TAGAATAAATATTCTTATAG+TGG + chr1_3:1318598-1318617 Msa0095900:intron 15.0%
!! AGAATAAATATTCTTATAGT+GGG + chr1_3:1318599-1318618 Msa0095900:intron 15.0%
!! AAAAGTGAAGAAAAAAATTT+GGG + chr1_3:1318758-1318777 Msa0095900:intron 15.0%
!! AACAAACTAATTAACAAATA+AGG - chr1_3:1318931-1318950 None:intergenic 15.0%
!! TTTGTATATGAAATAAATAG+AGG + chr1_3:1320627-1320646 Msa0095900:three_prime_UTR 15.0%
!!! ATGAATTTTTTGAATGTTTA+CGG - chr1_3:1320804-1320823 None:intergenic 15.0%
!! ATGTGTTTGAAAAATAATTC+AGG + chr1_3:1312775-1312794 Msa0095900:intron 20.0%
!! AAAAAAAAAAAAAATGGGGA+AGG + chr1_3:1313266-1313285 Msa0095900:intron 20.0%
!! AAAAAAAAAAAAATGGGGAA+GGG + chr1_3:1313267-1313286 Msa0095900:intron 20.0%
!!! AAAATATTGGTTATTCAAGA+TGG + chr1_3:1314832-1314851 Msa0095900:intron 20.0%
!!! AAATATTGGTTATTCAAGAT+GGG + chr1_3:1314833-1314852 Msa0095900:intron 20.0%
!! TTCATTATTGTTTGCTTAAT+AGG + chr1_3:1314904-1314923 Msa0095900:intron 20.0%
!! TTGTAGATAAATCTTCATAA+AGG + chr1_3:1315393-1315412 Msa0095900:intron 20.0%
!! AGAATTAGATAAACTCATAA+TGG + chr1_3:1316021-1316040 Msa0095900:CDS 20.0%
!!! ATTATTTTTTTTGCATGCTA+GGG + chr1_3:1316285-1316304 Msa0095900:intron 20.0%
!! GAAGTTCAATTAACAATAAA+TGG + chr1_3:1316350-1316369 Msa0095900:intron 20.0%
!!! TTGATTTAATGATGATTTTG+TGG + chr1_3:1316373-1316392 Msa0095900:intron 20.0%
!!! AAAGTATCAGAAAGAATATA+TGG + chr1_3:1316441-1316460 Msa0095900:CDS 20.0%
!! ACTTTGGTAAAAAAAAAGTT+GGG + chr1_3:1316640-1316659 Msa0095900:intron 20.0%
!! AATCAAATATAATGCATAAG+TGG - chr1_3:1317554-1317573 None:intergenic 20.0%
!!! ATTATATTTGATTTTCCTCA+TGG + chr1_3:1317561-1317580 Msa0095900:intron 20.0%
!! ACAAGGTAGATAAAAATAAT+AGG - chr1_3:1317739-1317758 None:intergenic 20.0%
!! GATAATACCAAATAAGATTA+CGG - chr1_3:1318331-1318350 None:intergenic 20.0%
!!! CAAAAACTTGACATATATTT+TGG + chr1_3:1318535-1318554 Msa0095900:intron 20.0%
!! TATATTGAAATTCCTTATAG+TGG + chr1_3:1318729-1318748 Msa0095900:intron 20.0%
!! GAAAAGTGAAGAAAAAAATT+TGG + chr1_3:1318757-1318776 Msa0095900:intron 20.0%
!! CTTCAAATCAAATAAATTAC+AGG - chr1_3:1318799-1318818 None:intergenic 20.0%
!!! ATTTGAAGTCAATAAATCTA+CGG + chr1_3:1318811-1318830 Msa0095900:intron 20.0%
!!! ACTAGAAGCTAAATTTTTAT+TGG + chr1_3:1320161-1320180 Msa0095900:intron 20.0%
!!! CTAGAAGCTAAATTTTTATT+GGG + chr1_3:1320162-1320181 Msa0095900:intron 20.0%
!!! TTTTAGAAAAATAATGAAGC+TGG + chr1_3:1320389-1320408 Msa0095900:three_prime_UTR 20.0%
!!! CAAAGATAAACAATACTTTT+CGG + chr1_3:1320422-1320441 Msa0095900:three_prime_UTR 20.0%
!!! TGAATTTTTTGAATGTTTAC+GGG - chr1_3:1320803-1320822 None:intergenic 20.0%
! ACATTAATTCATTTCACTTC+AGG - chr1_3:1312301-1312320 None:intergenic 25.0%
!! TAAAGAAAAAAGGACTTGTT+TGG - chr1_3:1312416-1312435 None:intergenic 25.0%
! TAATGTAATTGATCTGAGAA+AGG - chr1_3:1312639-1312658 None:intergenic 25.0%
! TTACGGAATTAAAGCAAAAA+TGG - chr1_3:1312716-1312735 None:intergenic 25.0%
!!! TTTTTTATCTCCAAATTCCA+CGG - chr1_3:1312803-1312822 None:intergenic 25.0%
! AAAAAAAAAAAATGGGGAAG+GGG + chr1_3:1313268-1313287 Msa0095900:intron 25.0%
!!! TATTGTTGATTTATGCTTTC+TGG + chr1_3:1313497-1313516 Msa0095900:intron 25.0%
! AAATAAATAGGTGTGTTTCA+GGG - chr1_3:1313629-1313648 None:intergenic 25.0%
! AAAATAAATAGGTGTGTTTC+AGG - chr1_3:1313630-1313649 None:intergenic 25.0%
!! TGAAACACACCTATTTATTT+TGG + chr1_3:1313629-1313648 Msa0095900:intron 25.0%
! ATACAAGCACCAAAATAAAT+AGG - chr1_3:1313641-1313660 None:intergenic 25.0%
! TAACAAATACTTCAACACAA+AGG - chr1_3:1314046-1314065 None:intergenic 25.0%
!!! GAAGTATTTGTTATATCTTC+TGG + chr1_3:1314053-1314072 Msa0095900:intron 25.0%
! TTTGTTGAACTACTAAGATT+AGG + chr1_3:1314260-1314279 Msa0095900:CDS 25.0%
! ACTGAACAATAACTACTAAA+AGG - chr1_3:1314400-1314419 None:intergenic 25.0%
!!! TCTATTTTTAATGTCATTGG+AGG + chr1_3:1314423-1314442 Msa0095900:intron 25.0%
! AAATGGAAATCATTCACATA+TGG + chr1_3:1314521-1314540 Msa0095900:CDS 25.0%
! ACATATGGTCAAATCATTAA+AGG + chr1_3:1314536-1314555 Msa0095900:CDS 25.0%
! AACCCACTTAATTATATCTA+CGG - chr1_3:1314633-1314652 None:intergenic 25.0%
! ATTAAAGTAAGGAAAAGACT+CGG - chr1_3:1314722-1314741 None:intergenic 25.0%
!! AATATTGGTTATTCAAGATG+GGG + chr1_3:1314834-1314853 Msa0095900:intron 25.0%
!!! TGTTCTTTTTCTTTTGGTTT+GGG + chr1_3:1315113-1315132 Msa0095900:intron 25.0%
!! TTAACATTAGTTTAACACAC+TGG + chr1_3:1315194-1315213 Msa0095900:intron 25.0%
!!! ATATATAAAAGCATCGAAAG+TGG - chr1_3:1315372-1315391 None:intergenic 25.0%
!! TGACATCTAAAAGTTTTTAC+AGG + chr1_3:1315603-1315622 Msa0095900:intron 25.0%
!!! ACTTCACTTGTTATTACTAT+TGG + chr1_3:1315636-1315655 Msa0095900:CDS 25.0%
! TACTATAATGTTTGGACAAA+GGG + chr1_3:1315692-1315711 Msa0095900:CDS 25.0%
! CTATAATAATCTCAAGTAGA+GGG - chr1_3:1315751-1315770 None:intergenic 25.0%
!! AATTTGAAGTACAGAACAAA+AGG - chr1_3:1315814-1315833 None:intergenic 25.0%
!! TGTTGCTAATTCATTTTATG+AGG + chr1_3:1315845-1315864 Msa0095900:intron 25.0%
! GGAAAACATGATAAAATTGA+AGG + chr1_3:1315958-1315977 Msa0095900:CDS 25.0%
! AAACATGATAAAATTGAAGG+AGG + chr1_3:1315961-1315980 Msa0095900:CDS 25.0%
! ATTACAAAAGCTTATCAAGA+AGG + chr1_3:1315990-1316009 Msa0095900:CDS 25.0%
! AAGAAACTATGTAGATTCAT+TGG + chr1_3:1316126-1316145 Msa0095900:CDS 25.0%
!!! GATTATTTTTTTTGCATGCT+AGG + chr1_3:1316284-1316303 Msa0095900:intron 25.0%
!! ACTCACTTTAATTTCTTAGA+AGG + chr1_3:1316411-1316430 Msa0095900:intron 25.0%
! TCTATGCTTGATTTCATATT+AGG - chr1_3:1316523-1316542 None:intergenic 25.0%
! TAATATGAAATCAAGCATAG+AGG + chr1_3:1316522-1316541 Msa0095900:CDS 25.0%
! GACTTTGGTAAAAAAAAAGT+TGG + chr1_3:1316639-1316658 Msa0095900:intron 25.0%
! CTTTGGTAAAAAAAAAGTTG+GGG + chr1_3:1316641-1316660 Msa0095900:intron 25.0%
! ATTTAATTATGCCTACTTAG+TGG + chr1_3:1316716-1316735 Msa0095900:intron 25.0%
! AATACAATCAATCCTTGATT+GGG - chr1_3:1316753-1316772 None:intergenic 25.0%
! TAATACAATCAATCCTTGAT+TGG - chr1_3:1316754-1316773 None:intergenic 25.0%
! TTAGTTGTTAGAAATGTTAG+TGG + chr1_3:1316808-1316827 Msa0095900:intron 25.0%
! AAGTGAAACATAAATATTGG+AGG - chr1_3:1317086-1317105 None:intergenic 25.0%
! TGCAAGTGAAACATAAATAT+TGG - chr1_3:1317089-1317108 None:intergenic 25.0%
!!! GTATATGAACTAGTTTTACA+TGG + chr1_3:1317127-1317146 Msa0095900:intron 25.0%
! ATCAAAACTTCATAAGATGT+TGG + chr1_3:1317188-1317207 Msa0095900:CDS 25.0%
!! CATTGTTTAAGGTATCAAAA+GGG + chr1_3:1317387-1317406 Msa0095900:intron 25.0%
!! TAAAAAAGGAAATTTTGCCT+TGG - chr1_3:1317472-1317491 None:intergenic 25.0%
! TTGTTTATGGTGTCTAAAAA+AGG - chr1_3:1317486-1317505 None:intergenic 25.0%
!! GTGGTCATCTTTTTATAAAA+GGG - chr1_3:1317535-1317554 None:intergenic 25.0%
!! AGTGGTCATCTTTTTATAAA+AGG - chr1_3:1317536-1317555 None:intergenic 25.0%
!!! CATTTTGATTCACAAAGAAA+TGG + chr1_3:1317667-1317686 Msa0095900:intron 25.0%
! TAAGGAATTTCAATATAAGC+AGG - chr1_3:1318726-1318745 None:intergenic 25.0%
! GATTTAAGTCAATTAATCTG+CGG + chr1_3:1318877-1318896 Msa0095900:intron 25.0%
!!! ATCAAGTTGAATACATGTTA+GGG - chr1_3:1319032-1319051 None:intergenic 25.0%
!!! TATCAAGTTGAATACATGTT+AGG - chr1_3:1319033-1319052 None:intergenic 25.0%
! ATAAGCTACAAACAGAATTA+AGG + chr1_3:1319674-1319693 Msa0095900:CDS 25.0%
! TAAGCTACAAACAGAATTAA+GGG + chr1_3:1319675-1319694 Msa0095900:CDS 25.0%
! ATGACACTTATTCCTTTAAA+AGG + chr1_3:1319857-1319876 Msa0095900:intron 25.0%
! AATGCAAGAGATATGATTAA+AGG + chr1_3:1320227-1320246 Msa0095900:CDS 25.0%
! ATGCAAGAGATATGATTAAA+GGG + chr1_3:1320228-1320247 Msa0095900:CDS 25.0%
!!! CGAAAAGTATTGTTTATCTT+TGG - chr1_3:1320424-1320443 None:intergenic 25.0%
!! AACAATACTTTTCGGTATTT+TGG + chr1_3:1320430-1320449 Msa0095900:three_prime_UTR 25.0%
!! ACAATACTTTTCGGTATTTT+GGG + chr1_3:1320431-1320450 Msa0095900:three_prime_UTR 25.0%
! TTTCTCTTTGTAACAAATCT+AGG + chr1_3:1320458-1320477 Msa0095900:three_prime_UTR 25.0%
!!! TCGTTGACTTGATTAAATTA+TGG - chr1_3:1320560-1320579 None:intergenic 25.0%
! ATAATTTAATCAAGTCAACG+AGG + chr1_3:1320559-1320578 Msa0095900:three_prime_UTR 25.0%
!!! GAATTTTTTGAATGTTTACG+GGG - chr1_3:1320802-1320821 None:intergenic 25.0%
GGTGGTTGATTAAAGAAAAA+AGG - chr1_3:1312426-1312445 None:intergenic 30.0%
TAAAGCTTAGGAAGAACAAT+TGG + chr1_3:1313088-1313107 Msa0095900:CDS 30.0%
AAAGCTTAGGAAGAACAATT+GGG + chr1_3:1313089-1313108 Msa0095900:CDS 30.0%
CATTTGTGACAGATGTAAAA+TGG - chr1_3:1313332-1313351 None:intergenic 30.0%
! CACAACAAACATTGATAATC+AGG + chr1_3:1313407-1313426 Msa0095900:intron 30.0%
TTTCCTATTGCTTGGAAATT+AGG + chr1_3:1313546-1313565 Msa0095900:intron 30.0%
ATTCCTAATTTCCAAGCAAT+AGG - chr1_3:1313552-1313571 None:intergenic 30.0%
AATAAATAGGTGTGTTTCAG+GGG - chr1_3:1313628-1313647 None:intergenic 30.0%
!! AGTCATGTTGTTTCTTACTT+TGG + chr1_3:1313716-1313735 Msa0095900:intron 30.0%
ACTGGTAAAACTTATACTCT+TGG + chr1_3:1313835-1313854 Msa0095900:CDS 30.0%
!! TATTTTTGCTGATGTTTCCT+TGG + chr1_3:1313915-1313934 Msa0095900:CDS 30.0%
TACAATGGCTATGTTATCAT+TGG - chr1_3:1314171-1314190 None:intergenic 30.0%
! AATGAAACATCACCAGTTTT+GGG - chr1_3:1314200-1314219 None:intergenic 30.0%
! TAATGAAACATCACCAGTTT+TGG - chr1_3:1314201-1314220 None:intergenic 30.0%
TAGAAGTCATGCTATTCTAA+TGG + chr1_3:1314331-1314350 Msa0095900:CDS 30.0%
GAATTGACATATATGCTGTA+TGG + chr1_3:1314359-1314378 Msa0095900:intron 30.0%
GACTGTACTGCTAATATAAT+AGG + chr1_3:1314449-1314468 Msa0095900:intron 30.0%
GTCCGTAGATATAATTAAGT+GGG + chr1_3:1314628-1314647 Msa0095900:intron 30.0%
! TTTGTAGAGTCTTTTCTACA+TGG + chr1_3:1314677-1314696 Msa0095900:intron 30.0%
CTTGATATACAAATGCTTTG+AGG + chr1_3:1314751-1314770 Msa0095900:intron 30.0%
!! CAAAGAAAGATTGATGGATT+TGG - chr1_3:1314956-1314975 None:intergenic 30.0%
AGATTGTTACGTGATTCATT+TGG + chr1_3:1315051-1315070 Msa0095900:CDS 30.0%
! TTCTCCTGTTCTTTTTCTTT+TGG + chr1_3:1315107-1315126 Msa0095900:intron 30.0%
CAAACCAAAAGAAAAAGAAC+AGG - chr1_3:1315114-1315133 None:intergenic 30.0%
!! CTGTTCTTTTTCTTTTGGTT+TGG + chr1_3:1315112-1315131 Msa0095900:intron 30.0%
TCAATGATTCTGCAAAAAGT+GGG - chr1_3:1315444-1315463 None:intergenic 30.0%
ATCAATGATTCTGCAAAAAG+TGG - chr1_3:1315445-1315464 None:intergenic 30.0%
ACTGCTAGTACTATAATGTT+TGG + chr1_3:1315684-1315703 Msa0095900:CDS 30.0%
GTACTATAATGTTTGGACAA+AGG + chr1_3:1315691-1315710 Msa0095900:CDS 30.0%
AAAAGGGAACTACTTGAATT+TGG - chr1_3:1315724-1315743 None:intergenic 30.0%
GCTATAATAATCTCAAGTAG+AGG - chr1_3:1315752-1315771 None:intergenic 30.0%
AAAATGAATTAGCAACAGCA+TGG - chr1_3:1315842-1315861 None:intergenic 30.0%
TGAACATAAGTGATGATTAG+TGG - chr1_3:1315908-1315927 None:intergenic 30.0%
TCAATATTTGTGCATCTTGT+AGG + chr1_3:1315925-1315944 Msa0095900:intron 30.0%
AAACTATGTAGATTCATTGG+AGG + chr1_3:1316129-1316148 Msa0095900:CDS 30.0%
TCCATAATATCACACTTAAC+TGG + chr1_3:1316251-1316270 Msa0095900:intron 30.0%
ACCAGTTAAGTGTGATATTA+TGG - chr1_3:1316255-1316274 None:intergenic 30.0%
! TGTTTGAAGTTTATCCCAAT+AGG + chr1_3:1316568-1316587 Msa0095900:intron 30.0%
AATCATCTACTTCACCTATT+GGG - chr1_3:1316585-1316604 None:intergenic 30.0%
TAATCATCTACTTCACCTAT+TGG - chr1_3:1316586-1316605 None:intergenic 30.0%
ATACAATCAATCCTTGATTG+GGG - chr1_3:1316752-1316771 None:intergenic 30.0%
TTGTTAGAAATGTTAGTGGA+CGG + chr1_3:1316812-1316831 Msa0095900:intron 30.0%
!!! AGTGATAATGTGGTTTTAAG+GGG - chr1_3:1316879-1316898 None:intergenic 30.0%
!!! GAGTGATAATGTGGTTTTAA+GGG - chr1_3:1316880-1316899 None:intergenic 30.0%
ATACCTTAAACAATGCTCTA+AGG - chr1_3:1317382-1317401 None:intergenic 30.0%
! GCATTGTTTAAGGTATCAAA+AGG + chr1_3:1317386-1317405 Msa0095900:intron 30.0%
!! GTATTTGACTTGTATTTCCA+AGG + chr1_3:1317452-1317471 Msa0095900:intron 30.0%
TTTCTACATCAATAACCATG+AGG - chr1_3:1317579-1317598 None:intergenic 30.0%
TTAATATCTTCTGTTCAGCT+TGG + chr1_3:1317851-1317870 Msa0095900:intron 30.0%
TAATATCTTCTGTTCAGCTT+GGG + chr1_3:1317852-1317871 Msa0095900:intron 30.0%
AGAAAAATATCAACATCGAC+AGG - chr1_3:1317910-1317929 None:intergenic 30.0%
! TCGATGTTGATATTTTTCTG+TGG + chr1_3:1317911-1317930 Msa0095900:intron 30.0%
AATAAGTCATTGCTAATGAC+AGG - chr1_3:1318040-1318059 None:intergenic 30.0%
AGATATGAGAAAAGAAACAG+GGG - chr1_3:1318153-1318172 None:intergenic 30.0%
CAGATATGAGAAAAGAAACA+GGG - chr1_3:1318154-1318173 None:intergenic 30.0%
GGAAGATTTGAAAAAGAAGT+GGG + chr1_3:1318393-1318412 Msa0095900:CDS 30.0%
TCTAGCTAACTTAGTTTAGA+AGG - chr1_3:1318985-1319004 None:intergenic 30.0%
AAACTAAGTTAGCTAGAACT+TGG + chr1_3:1318988-1319007 Msa0095900:intron 30.0%
ACTTGATACAGAAACAAATC+AGG + chr1_3:1319045-1319064 Msa0095900:intron 30.0%
CTTGATACAGAAACAAATCA+GGG + chr1_3:1319046-1319065 Msa0095900:intron 30.0%
TTGATACAGAAACAAATCAG+GGG + chr1_3:1319047-1319066 Msa0095900:intron 30.0%
ATTGCAAATTTGGCAATGAA+TGG + chr1_3:1319160-1319179 Msa0095900:CDS 30.0%
! GTTGGTTTCTGTACATAATA+CGG - chr1_3:1319278-1319297 None:intergenic 30.0%
ATTCTGTTTGTAGCTTATCT+AGG - chr1_3:1319672-1319691 None:intergenic 30.0%
AAGCTACAAACAGAATTAAG+GGG + chr1_3:1319676-1319695 Msa0095900:CDS 30.0%
AATGTGGCAAAACTTAAACT+CGG - chr1_3:1319978-1319997 None:intergenic 30.0%
! TAAGTTTTGCCACATTGTAT+AGG + chr1_3:1319982-1320001 Msa0095900:intron 30.0%
! AAGTTTTGCCACATTGTATA+GGG + chr1_3:1319983-1320002 Msa0095900:intron 30.0%
! TTTGCATTTTGAACAATCCA+TGG - chr1_3:1320051-1320070 None:intergenic 30.0%
TGCAAGAGATATGATTAAAG+GGG + chr1_3:1320229-1320248 Msa0095900:CDS 30.0%
GGGTTTACATTTCTAACAAT+TGG - chr1_3:1320782-1320801 None:intergenic 30.0%
! AAGGACTTGTTTGGTTGATT+TGG - chr1_3:1312407-1312426 None:intergenic 35.0%
GCAAGTAGTAGTAACAGAAA+CGG + chr1_3:1312487-1312506 Msa0095900:CDS 35.0%
! AGAAGTATGATGGTCTTTGA+CGG - chr1_3:1312605-1312624 None:intergenic 35.0%
! AGAACTTACCAGAAGTATGA+TGG - chr1_3:1312615-1312634 None:intergenic 35.0%
GAAAAATAATTCAGGATCCG+TGG + chr1_3:1312783-1312802 Msa0095900:intron 35.0%
TGTCTATGTTACAGCTGAAA+AGG + chr1_3:1313064-1313083 Msa0095900:intron 35.0%
AGCTGAAAAGGTTAAAGCTT+AGG + chr1_3:1313076-1313095 Msa0095900:intron 35.0%
AAAACGTGTTTACGAAGTTG+TGG + chr1_3:1313161-1313180 Msa0095900:CDS 35.0%
!! TATTCATTGCTTGCTGCTTT+AGG + chr1_3:1313220-1313239 Msa0095900:intron 35.0%
! CATTTCTTTTCCACCAAAGA+TGG - chr1_3:1313470-1313489 None:intergenic 35.0%
! TTGATTTATGCTTTCTGGAG+TGG + chr1_3:1313502-1313521 Msa0095900:intron 35.0%
! TAACCTTGTTTCCTATTGCT+TGG + chr1_3:1313538-1313557 Msa0095900:intron 35.0%
TTTCCAAGCAATAGGAAACA+AGG - chr1_3:1313544-1313563 None:intergenic 35.0%
AATGACAAACTCCAGAAAGT+GGG - chr1_3:1313577-1313596 None:intergenic 35.0%
TAATGACAAACTCCAGAAAG+TGG - chr1_3:1313578-1313597 None:intergenic 35.0%
AAGGCATGGCATGTAATAAA+AGG - chr1_3:1313747-1313766 None:intergenic 35.0%
ACTTATACTCTTGGAAGACT+TGG + chr1_3:1313844-1313863 Msa0095900:CDS 35.0%
CTTATACTCTTGGAAGACTT+GGG + chr1_3:1313845-1313864 Msa0095900:CDS 35.0%
TTATACTCTTGGAAGACTTG+GGG + chr1_3:1313846-1313865 Msa0095900:CDS 35.0%
TGAGATTGAATCAGTTTCCA+AGG - chr1_3:1313935-1313954 None:intergenic 35.0%
AATCTCAGTCTCATATTTGC+AGG + chr1_3:1313948-1313967 Msa0095900:CDS 35.0%
! ATTCCCATGTCAGCTTTATA+TGG + chr1_3:1314118-1314137 Msa0095900:intron 35.0%
TCTCCATATAAAGCTGACAT+GGG - chr1_3:1314124-1314143 None:intergenic 35.0%
GCTTTATATGGAGACTATAC+AGG + chr1_3:1314130-1314149 Msa0095900:intron 35.0%
!!! AGTTTTGGGATCTTCTACAA+TGG - chr1_3:1314186-1314205 None:intergenic 35.0%
ATTGTAGAAGATCCCAAAAC+TGG + chr1_3:1314185-1314204 Msa0095900:CDS 35.0%
AGCTACTCTAATCGAGATTA+GGG + chr1_3:1314226-1314245 Msa0095900:CDS 35.0%
TGAACTACTAAGATTAGGAG+AGG + chr1_3:1314265-1314284 Msa0095900:CDS 35.0%
! AGCATGACTTCTAGAAGATT+CGG - chr1_3:1314324-1314343 None:intergenic 35.0%
GCTTCTCATTCAAGTGAAAA+TGG + chr1_3:1314504-1314523 Msa0095900:CDS 35.0%
!! CATTAAAGGCACCTATTGTT+CGG + chr1_3:1314550-1314569 Msa0095900:CDS 35.0%
AAGATCTACAACAACCAACT+TGG - chr1_3:1314580-1314599 None:intergenic 35.0%
TCAGAACGAATTGACAAATC+AGG + chr1_3:1314606-1314625 Msa0095900:CDS 35.0%
GGTCCGTAGATATAATTAAG+TGG + chr1_3:1314627-1314646 Msa0095900:intron 35.0%
!!! AGGCAGTTTTTTTTGAATGC+TGG + chr1_3:1314778-1314797 Msa0095900:intron 35.0%
!!! GGCAGTTTTTTTTGAATGCT+GGG + chr1_3:1314779-1314798 Msa0095900:intron 35.0%
TCCTTGCTCAAGGAAAATAT+TGG + chr1_3:1314819-1314838 Msa0095900:intron 35.0%
! ACCAATATTTTCCTTGAGCA+AGG - chr1_3:1314823-1314842 None:intergenic 35.0%
GTTTGCTTAATAGGAAGTGA+AGG + chr1_3:1314913-1314932 Msa0095900:intron 35.0%
TGCACTCAAAGAAAGATTGA+TGG - chr1_3:1314962-1314981 None:intergenic 35.0%
AATCTTTCTTTGAGTGCACT+GGG + chr1_3:1314964-1314983 Msa0095900:CDS 35.0%
TTGTTACGTGATTCATTTGG+AGG + chr1_3:1315054-1315073 Msa0095900:CDS 35.0%
GTTAACATCAACTGCAAACA+TGG - chr1_3:1315179-1315198 None:intergenic 35.0%
TGAAACATGTGACATAACAC+AGG - chr1_3:1315223-1315242 None:intergenic 35.0%
TATAGATGACACTCATGTCA+TGG + chr1_3:1315302-1315321 Msa0095900:intron 35.0%
CAATGATTCTGCAAAAAGTG+GGG - chr1_3:1315443-1315462 None:intergenic 35.0%
TGCAGAATCATTGATATTCG+AGG + chr1_3:1315450-1315469 Msa0095900:intron 35.0%
TTGATATTCGAGGCAAATCT+TGG + chr1_3:1315460-1315479 Msa0095900:intron 35.0%
TGATATTCGAGGCAAATCTT+GGG + chr1_3:1315461-1315480 Msa0095900:intron 35.0%
AAACACATACTGCACAGATT+TGG - chr1_3:1315584-1315603 None:intergenic 35.0%
TATAATGTTTGGACAAAGGG+TGG + chr1_3:1315695-1315714 Msa0095900:intron 35.0%
ATAATGTTTGGACAAAGGGT+GGG + chr1_3:1315696-1315715 Msa0095900:intron 35.0%
TCAAGTAGAGGGAGAAAAAA+GGG - chr1_3:1315740-1315759 None:intergenic 35.0%
!!! GAAAAGAGCATTGGACATTT+TGG - chr1_3:1315777-1315796 None:intergenic 35.0%
! ATGTCCAATGCTCTTTTCAT+TGG + chr1_3:1315779-1315798 Msa0095900:intron 35.0%
AAGTGATGATTAGTGGTTAC+AGG - chr1_3:1315901-1315920 None:intergenic 35.0%
CATTTGAGGATGAGATTGAA+AGG + chr1_3:1316065-1316084 Msa0095900:CDS 35.0%
TATGTAGATTCATTGGAGGT+TGG + chr1_3:1316133-1316152 Msa0095900:intron 35.0%
CCAAGAATTGTGTGATTCAA+GGG - chr1_3:1316222-1316241 None:intergenic 35.0%
ACCAAGAATTGTGTGATTCA+AGG - chr1_3:1316223-1316242 None:intergenic 35.0%
GATGAATCAACGTAAGAATG+AGG + chr1_3:1316495-1316514 Msa0095900:CDS 35.0%
AGTCCTCTATAAACATGAAC+AGG + chr1_3:1316606-1316625 Msa0095900:intron 35.0%
ACTCCTGTTCATGTTTATAG+AGG - chr1_3:1316612-1316631 None:intergenic 35.0%
TCTATAAACATGAACAGGAG+TGG + chr1_3:1316611-1316630 Msa0095900:intron 35.0%
CTATAAACATGAACAGGAGT+GGG + chr1_3:1316612-1316631 Msa0095900:intron 35.0%
TATAAACATGAACAGGAGTG+GGG + chr1_3:1316613-1316632 Msa0095900:intron 35.0%
GTAAAAAAAAAGTTGGGGCA+GGG + chr1_3:1316646-1316665 Msa0095900:intron 35.0%
TAAAAAAAAAGTTGGGGCAG+GGG + chr1_3:1316647-1316666 Msa0095900:intron 35.0%
ATCTGGTGTGAAGTAATTTC+AGG + chr1_3:1316672-1316691 Msa0095900:intron 35.0%
ATTATGCCTACTTAGTGGTT+AGG + chr1_3:1316721-1316740 Msa0095900:intron 35.0%
TTATGCCTACTTAGTGGTTA+GGG + chr1_3:1316722-1316741 Msa0095900:intron 35.0%
GTATAAGGATAGGAGAGATA+AGG - chr1_3:1316853-1316872 None:intergenic 35.0%
!!! TGATAATGTGGTTTTAAGGG+GGG - chr1_3:1316877-1316896 None:intergenic 35.0%
!!! GTGATAATGTGGTTTTAAGG+GGG - chr1_3:1316878-1316897 None:intergenic 35.0%
!! GGAGTGATAATGTGGTTTTA+AGG - chr1_3:1316881-1316900 None:intergenic 35.0%
TTATCACTCCTGATTGTGTT+AGG + chr1_3:1316891-1316910 Msa0095900:intron 35.0%
TTCTTTATCCTAGATTCCCA+AGG + chr1_3:1316925-1316944 Msa0095900:intron 35.0%
ATTATTTGTTTCCCCTTCAG+CGG - chr1_3:1317014-1317033 None:intergenic 35.0%
!! AACAGTCAGAGGTATGTTTT+TGG + chr1_3:1317059-1317078 Msa0095900:intron 35.0%
CTAGTTCATATACCACAATG+AGG - chr1_3:1317120-1317139 None:intergenic 35.0%
ATGGATGTGTTTACTGTGAT+AGG + chr1_3:1317146-1317165 Msa0095900:intron 35.0%
TCATAAGATGTTGGAAGATG+AGG + chr1_3:1317197-1317216 Msa0095900:CDS 35.0%
TTTAAGTCTTGAAGCTGATG+AGG + chr1_3:1317278-1317297 Msa0095900:intron 35.0%
CTATGGCATTTGTGCAATTT+AGG - chr1_3:1317313-1317332 None:intergenic 35.0%
CTAAATTGCACAAATGCCAT+AGG + chr1_3:1317311-1317330 Msa0095900:intron 35.0%
ATCTACTAGACAAAAGCCTA+TGG - chr1_3:1317330-1317349 None:intergenic 35.0%
!! TGTCCTTAGAGCATTGTTTA+AGG + chr1_3:1317376-1317395 Msa0095900:intron 35.0%
ACACCATAAACAATGCTCTT+AGG + chr1_3:1317493-1317512 Msa0095900:intron 35.0%
CACCATAAACAATGCTCTTA+GGG + chr1_3:1317494-1317513 Msa0095900:intron 35.0%
GGCTTTGCGTTATTTATGAT+AGG + chr1_3:1317979-1317998 Msa0095900:intron 35.0%
! TTATGATAGGTTGAAACCTG+AGG + chr1_3:1317992-1318011 Msa0095900:intron 35.0%
! TATGATAGGTTGAAACCTGA+GGG + chr1_3:1317993-1318012 Msa0095900:intron 35.0%
TTATTTACATCCACGTGTGT+GGG + chr1_3:1318055-1318074 Msa0095900:intron 35.0%
CCAGATATGAGAAAAGAAAC+AGG - chr1_3:1318155-1318174 None:intergenic 35.0%
!! CCTGTTTCTTTTCTCATATC+TGG + chr1_3:1318152-1318171 Msa0095900:intron 35.0%
CTCATATCTGGAAGTGAAAT+TGG + chr1_3:1318164-1318183 Msa0095900:intron 35.0%
! CACGTGTATTTTCACATTGA+CGG - chr1_3:1318245-1318264 None:intergenic 35.0%
TTGTCTGCCGTAATCTTATT+TGG + chr1_3:1318321-1318340 Msa0095900:intron 35.0%
GGGAAGATTTGAAAAAGAAG+TGG + chr1_3:1318392-1318411 Msa0095900:CDS 35.0%
AGATTTGAAAAAGAAGTGGG+CGG + chr1_3:1318396-1318415 Msa0095900:CDS 35.0%
! ACTTTTCTACTGCCACTATA+AGG - chr1_3:1318744-1318763 None:intergenic 35.0%
TTAAGTCAATTAATCTGCGG+AGG + chr1_3:1318880-1318899 Msa0095900:intron 35.0%
AACCAACCAAGAACTCATTA+TGG + chr1_3:1319291-1319310 Msa0095900:CDS 35.0%
ATTTCCACAGAGATTAGCAA+TGG - chr1_3:1319395-1319414 None:intergenic 35.0%
ATTGCTAATCTCTGTGGAAA+TGG + chr1_3:1319394-1319413 Msa0095900:CDS 35.0%
! TTTTGTAGAAAAGACCCTTC+TGG + chr1_3:1319517-1319536 Msa0095900:intron 35.0%
TAGTTCTCGACTATAAGTGT+AGG + chr1_3:1319575-1319594 Msa0095900:intron 35.0%
! TGCACTCTGTATCCTTTTAA+AGG - chr1_3:1319872-1319891 None:intergenic 35.0%
CTCTTTAACCCTATACAATG+TGG - chr1_3:1319994-1320013 None:intergenic 35.0%
CATTGTATAGGGTTAAAGAG+TGG + chr1_3:1319994-1320013 Msa0095900:intron 35.0%
ATATCTCTTGCATTTGCTTC+TGG - chr1_3:1320221-1320240 None:intergenic 35.0%
GCAAGAGATATGATTAAAGG+GGG + chr1_3:1320230-1320249 Msa0095900:CDS 35.0%
AAGAGTCTTTATGTCTTCTC+TGG - chr1_3:1320294-1320313 None:intergenic 35.0%
AGAAAAATAATGAAGCTGGC+TGG + chr1_3:1320393-1320412 Msa0095900:three_prime_UTR 35.0%
CTCTTTGTAACAAATCTAGG+TGG + chr1_3:1320461-1320480 Msa0095900:three_prime_UTR 35.0%
TTGTAACAAATCTAGGTGGA+TGG + chr1_3:1320465-1320484 Msa0095900:three_prime_UTR 35.0%
TCTTGTATTCCATCATGGAA+TGG + chr1_3:1320534-1320553 Msa0095900:three_prime_UTR 35.0%
AAATTATGGCCATTCCATGA+TGG - chr1_3:1320546-1320565 None:intergenic 35.0%
ATTTAATCAAGTCAACGAGG+TGG + chr1_3:1320562-1320581 Msa0095900:three_prime_UTR 35.0%
AATGTGAGTCACATCTGTAG+CGG + chr1_3:1312316-1312335 Msa0095900:five_prime_UTR 40.0%
ATAATGTCCACCTTCTCTCA+AGG + chr1_3:1312460-1312479 Msa0095900:exon 40.0%
TTGGACTTGACATTTGACGA+CGG - chr1_3:1312550-1312569 None:intergenic 40.0%
GTCAAAGACCATCATACTTC+TGG + chr1_3:1312604-1312623 Msa0095900:CDS 40.0%
AATTCAGGATCCGTGGAATT+TGG + chr1_3:1312790-1312809 Msa0095900:intron 40.0%
! GTTGTGTTTTCTCAAGTTCC+TGG + chr1_3:1312862-1312881 Msa0095900:intron 40.0%
GAAGAGTTAGAGTAGCTGTT+AGG + chr1_3:1312884-1312903 Msa0095900:CDS 40.0%
AAATGCGGAAGAATCAGTAG+CGG + chr1_3:1312918-1312937 Msa0095900:CDS 40.0%
! ATTGATTCAGCGTATACCTC+AGG - chr1_3:1312976-1312995 None:intergenic 40.0%
CTTAGGAAGAACAATTGGGA+TGG + chr1_3:1313093-1313112 Msa0095900:CDS 40.0%
!! ATCAGGTTTGTTGATGTGTG+AGG + chr1_3:1313424-1313443 Msa0095900:intron 40.0%
! ACATCTGGTTTAGCCATCTT+TGG + chr1_3:1313454-1313473 Msa0095900:intron 40.0%
ATTAGGAATTCCCCACTTTC+TGG + chr1_3:1313563-1313582 Msa0095900:intron 40.0%
ATGACAAACTCCAGAAAGTG+GGG - chr1_3:1313576-1313595 None:intergenic 40.0%
CAGAAGGTTAAAGTAAGGCA+TGG - chr1_3:1313761-1313780 None:intergenic 40.0%
CTCTGCAGAAGGTTAAAGTA+AGG - chr1_3:1313766-1313785 None:intergenic 40.0%
TGGCTACAATGGGACAATTA+TGG + chr1_3:1313795-1313814 Msa0095900:CDS 40.0%
AATGGGACAATTATGGCCTA+TGG + chr1_3:1313802-1313821 Msa0095900:CDS 40.0%
GTCTCCATATAAAGCTGACA+TGG - chr1_3:1314125-1314144 None:intergenic 40.0%
TGGCTATGTTATCATTGGCA+GGG - chr1_3:1314166-1314185 None:intergenic 40.0%
ATGGCTATGTTATCATTGGC+AGG - chr1_3:1314167-1314186 None:intergenic 40.0%
! ACTGGTGATGTTTCATTACC+TGG + chr1_3:1314203-1314222 Msa0095900:CDS 40.0%
GAGCTACTCTAATCGAGATT+AGG + chr1_3:1314225-1314244 Msa0095900:CDS 40.0%
GTAGTTCAACAAAACTCTGC+TGG - chr1_3:1314253-1314272 None:intergenic 40.0%
GTTTCGTATTTGCAGCAAAG+CGG - chr1_3:1314295-1314314 None:intergenic 40.0%
CATGTAAAGAGATCCGTCAA+AGG + chr1_3:1314474-1314493 Msa0095900:CDS 40.0%
!! AGAAGCATCTCTTCCTTTGA+CGG - chr1_3:1314490-1314509 None:intergenic 40.0%
! AACTTGGCTTTCCGAACAAT+AGG - chr1_3:1314564-1314583 None:intergenic 40.0%
TATTGTTCGGAAAGCCAAGT+TGG + chr1_3:1314563-1314582 Msa0095900:CDS 40.0%
TTGGTTGTTGTAGATCTTGC+TGG + chr1_3:1314582-1314601 Msa0095900:CDS 40.0%
AAAAGACTCGGAGAGGAATA+TGG - chr1_3:1314710-1314729 None:intergenic 40.0%
!! TACAAATGCTTTGAGGCAAC+AGG + chr1_3:1314758-1314777 Msa0095900:intron 40.0%
! AAGTCAGTTTTCCTTGCTCA+AGG + chr1_3:1314809-1314828 Msa0095900:intron 40.0%
ATTGGTTATTCAAGATGGGG+AGG + chr1_3:1314837-1314856 Msa0095900:intron 40.0%
CAATCTTTCTTTGAGTGCAC+TGG + chr1_3:1314963-1314982 Msa0095900:CDS 40.0%
ATCTTTCTTTGAGTGCACTG+GGG + chr1_3:1314965-1314984 Msa0095900:CDS 40.0%
!! GTAAGCTTTGAGTCACGAAA+TGG - chr1_3:1315030-1315049 None:intergenic 40.0%
GATATTCGAGGCAAATCTTG+GGG + chr1_3:1315462-1315481 Msa0095900:intron 40.0%
CTCAAGTAGAGGGAGAAAAA+AGG - chr1_3:1315741-1315760 None:intergenic 40.0%
!!! AAGAGCATTGGACATTTTGG+TGG - chr1_3:1315774-1315793 None:intergenic 40.0%
! CCAATGCTCTTTTCATTGGT+CGG + chr1_3:1315783-1315802 Msa0095900:intron 40.0%
!! AAGACAGCAGAAAGCATTTG+AGG + chr1_3:1316051-1316070 Msa0095900:CDS 40.0%
CCCTTGAATCACACAATTCT+TGG + chr1_3:1316219-1316238 Msa0095900:intron 40.0%
GGTAAAAAAAAAGTTGGGGC+AGG + chr1_3:1316645-1316664 Msa0095900:intron 40.0%
AAAAAAAAAGTTGGGGCAGG+GGG + chr1_3:1316648-1316667 Msa0095900:intron 40.0%
GAAATCCCTAACCACTAAGT+AGG - chr1_3:1316730-1316749 None:intergenic 40.0%
! CACAATCAGGAGTGATAATG+TGG - chr1_3:1316889-1316908 None:intergenic 40.0%
ATTTCCTCAGCAGATACCTT+GGG - chr1_3:1316944-1316963 None:intergenic 40.0%
! TTCTAAGAAAAGCCGCTGAA+GGG + chr1_3:1316999-1317018 Msa0095900:CDS 40.0%
TCATATACCACAATGAGGAG+AGG - chr1_3:1317115-1317134 None:intergenic 40.0%
!! TGCCCTAAGAGCATTGTTTA+TGG - chr1_3:1317499-1317518 None:intergenic 40.0%
!! AAAGGCATTGCGAATGAGAT+CGG - chr1_3:1317693-1317712 None:intergenic 40.0%
TGGAATTGTACTCGTGTCAA+TGG + chr1_3:1317931-1317950 Msa0095900:intron 40.0%
GGAATTGTACTCGTGTCAAT+GGG + chr1_3:1317932-1317951 Msa0095900:intron 40.0%
CCAAATACTTGAAGATGCCA+TGG - chr1_3:1317961-1317980 None:intergenic 40.0%
CCATGGCATCTTCAAGTATT+TGG + chr1_3:1317958-1317977 Msa0095900:intron 40.0%
GTCATTGCTAATGACAGGTA+AGG - chr1_3:1318035-1318054 None:intergenic 40.0%
CTTATTTACATCCACGTGTG+TGG + chr1_3:1318054-1318073 Msa0095900:intron 40.0%
TGTGTGGGAAGACTATTCAA+TGG + chr1_3:1318070-1318089 Msa0095900:intron 40.0%
GACTATTCAGCTGCTTGATT+GGG + chr1_3:1318186-1318205 Msa0095900:intron 40.0%
TTGATTGGGACGTCAAATGA+CGG + chr1_3:1318200-1318219 Msa0095900:intron 40.0%
ATGCAGCTGATGCTTAACTT+GGG - chr1_3:1318439-1318458 None:intergenic 40.0%
AATGCAGCTGATGCTTAACT+TGG - chr1_3:1318440-1318459 None:intergenic 40.0%
AGCTGCATTCTTCAGGAAAT+GGG + chr1_3:1318451-1318470 Msa0095900:CDS 40.0%
TCAAAGAGCTTGCCTATTGA+AGG - chr1_3:1318483-1318502 None:intergenic 40.0%
TTGCTACAACTTTCACAGCA+TGG - chr1_3:1318676-1318695 None:intergenic 40.0%
ATACAGAAACAAATCAGGGG+AGG + chr1_3:1319050-1319069 Msa0095900:intron 40.0%
AAGTATGGTCTCATCTTGTG+TGG - chr1_3:1319122-1319141 None:intergenic 40.0%
!! TGCAGGTGCTATTGCAAATT+TGG + chr1_3:1319150-1319169 Msa0095900:CDS 40.0%
ATAATACGGATGCAGAGATC+AGG - chr1_3:1319264-1319283 None:intergenic 40.0%
AAGAACTCATTATGGCCCAA+GGG + chr1_3:1319299-1319318 Msa0095900:CDS 40.0%
AGTTTGTGGATCTTCAGCAT+TGG - chr1_3:1319353-1319372 None:intergenic 40.0%
! GGACACAAAACTTTTAGTGG+TGG - chr1_3:1319644-1319663 None:intergenic 40.0%
! CAGGGACACAAAACTTTTAG+TGG - chr1_3:1319647-1319666 None:intergenic 40.0%
TTGTAGCTTATCTAGGTGCA+GGG - chr1_3:1319665-1319684 None:intergenic 40.0%
TTTGTAGCTTATCTAGGTGC+AGG - chr1_3:1319666-1319685 None:intergenic 40.0%
CAAACAGAATTAAGGGGTGA+AGG + chr1_3:1319682-1319701 Msa0095900:CDS 40.0%
! CACAGTTTTCATAGCTACCA+CGG + chr1_3:1319901-1319920 Msa0095900:intron 40.0%
TGGAAGATCTTTCCTTATCG+AGG + chr1_3:1320014-1320033 Msa0095900:CDS 40.0%
AGATCTTTCCTTATCGAGGA+TGG + chr1_3:1320018-1320037 Msa0095900:CDS 40.0%
ATAACGAAGCCTCGTCAATT+AGG + chr1_3:1320070-1320089 Msa0095900:CDS 40.0%
! CTCTGTCATTTAGCACAACA+CGG + chr1_3:1320111-1320130 Msa0095900:CDS 40.0%
CATCCACCAGAAATATCTCA+GGG - chr1_3:1320194-1320213 None:intergenic 40.0%
ACATCCACCAGAAATATCTC+AGG - chr1_3:1320195-1320214 None:intergenic 40.0%
!! TGATTAAAGGGGGTGCTTTA+TGG + chr1_3:1320240-1320259 Msa0095900:CDS 40.0%
!! GATTAAAGGGGGTGCTTTAT+GGG + chr1_3:1320241-1320260 Msa0095900:CDS 40.0%
AAACTCTAGACAAGTGTTCG+TGG + chr1_3:1320509-1320528 Msa0095900:three_prime_UTR 40.0%
AACTCTAGACAAGTGTTCGT+GGG + chr1_3:1320510-1320529 Msa0095900:three_prime_UTR 40.0%
TGGGTTCTTGTATTCCATCA+TGG + chr1_3:1320529-1320548 Msa0095900:three_prime_UTR 40.0%
!! GTGTCGTGTAGAGTGTTGTT+CGG + chr1_3:1312269-1312288 Msa0095900:five_prime_UTR 45.0%
! CGGTTGTTTCAAAGAGGTTC+TGG - chr1_3:1312530-1312549 None:intergenic 45.0%
! TGACGACGGTTGTTTCAAAG+AGG - chr1_3:1312536-1312555 None:intergenic 45.0%
ACAGCTACTCTAACTCTTCC+AGG - chr1_3:1312883-1312902 None:intergenic 45.0%
TTAGAGTAGCTGTTAGGCTG+CGG + chr1_3:1312890-1312909 Msa0095900:CDS 45.0%
! ACTGATTCTTCCGCATTTGG+TGG - chr1_3:1312916-1312935 None:intergenic 45.0%
!! GCTACTGATTCTTCCGCATT+TGG - chr1_3:1312919-1312938 None:intergenic 45.0%
CTGTGTTGAATTACAGCCTG+AGG + chr1_3:1312957-1312976 Msa0095900:CDS 45.0%
GTGTTTACGAAGTTGTGGCT+AGG + chr1_3:1313166-1313185 Msa0095900:CDS 45.0%
AAGCCAAGCACTTACTGCTA+AGG + chr1_3:1313381-1313400 Msa0095900:intron 45.0%
TCACCTTAGCAGTAAGTGCT+TGG - chr1_3:1313387-1313406 None:intergenic 45.0%
! TCTGGTTTAGCCATCTTTGG+TGG + chr1_3:1313457-1313476 Msa0095900:intron 45.0%
TGGTGCTTGTATCACATCAC+AGG + chr1_3:1313649-1313668 Msa0095900:intron 45.0%
TAACCTTCTGCAGAGTGTAC+TGG + chr1_3:1313771-1313790 Msa0095900:intron 45.0%
AGTGTACTGGATGGCTACAA+TGG + chr1_3:1313784-1313803 Msa0095900:CDS 45.0%
GTGTACTGGATGGCTACAAT+GGG + chr1_3:1313785-1313804 Msa0095900:CDS 45.0%
ATTATGGCCTATGGACAGAC+TGG + chr1_3:1313811-1313830 Msa0095900:CDS 45.0%
TGGAATAATGGTGCGAGCTA+TGG + chr1_3:1313888-1313907 Msa0095900:CDS 45.0%
ATCTCGATTAGAGTAGCTCC+AGG - chr1_3:1314224-1314243 None:intergenic 45.0%
AGTAAGGAAAAGACTCGGAG+AGG - chr1_3:1314717-1314736 None:intergenic 45.0%
TTACTATTGGACCCTCACCA+CGG + chr1_3:1315649-1315668 Msa0095900:CDS 45.0%
! CCGACCAATGAAAAGAGCAT+TGG - chr1_3:1315786-1315805 None:intergenic 45.0%
GTGCATCTTGTAGGCTATGA+AGG + chr1_3:1315934-1315953 Msa0095900:intron 45.0%
CATCTTGTAGGCTATGAAGG+TGG + chr1_3:1315937-1315956 Msa0095900:intron 45.0%
TAGCTACTGAAGCACAGCAT+CGG + chr1_3:1316089-1316108 Msa0095900:CDS 45.0%
GTTAGGGATTTCCCCAATCA+AGG + chr1_3:1316738-1316757 Msa0095900:intron 45.0%
! TAAGGGGGGAGTATAAGGAT+AGG - chr1_3:1316863-1316882 None:intergenic 45.0%
!!! GGTTTTAAGGGGGGAGTATA+AGG - chr1_3:1316868-1316887 None:intergenic 45.0%
CAAGTGAGCCTAACACAATC+AGG - chr1_3:1316902-1316921 None:intergenic 45.0%
AGCAGATACCTTGGGAATCT+AGG - chr1_3:1316936-1316955 None:intergenic 45.0%
CATTTCCTCAGCAGATACCT+TGG - chr1_3:1316945-1316964 None:intergenic 45.0%
! CAAGGTATCTGCTGAGGAAA+TGG + chr1_3:1316943-1316962 Msa0095900:intron 45.0%
! CTTCTAAGAAAAGCCGCTGA+AGG + chr1_3:1316998-1317017 Msa0095900:CDS 45.0%
TCTAAGAAAAGCCGCTGAAG+GGG + chr1_3:1317000-1317019 Msa0095900:CDS 45.0%
CGCTGAACTAAAACAGTCAG+AGG + chr1_3:1317048-1317067 Msa0095900:CDS 45.0%
TGCATTTCCTCTCCTCATTG+TGG + chr1_3:1317105-1317124 Msa0095900:intron 45.0%
AACCTGAGGGCTTAACATGT+TGG + chr1_3:1318006-1318025 Msa0095900:intron 45.0%
AACCAACATGTTAAGCCCTC+AGG - chr1_3:1318011-1318030 None:intergenic 45.0%
GGACTATTCAGCTGCTTGAT+TGG + chr1_3:1318185-1318204 Msa0095900:intron 45.0%
ACAAGTCGACAACTAGACGA+GGG + chr1_3:1318372-1318391 Msa0095900:intron 45.0%
TTGAAAAAGAAGTGGGCGGT+CGG + chr1_3:1318400-1318419 Msa0095900:CDS 45.0%
AAGCATCAGCTGCATTCTTC+AGG + chr1_3:1318444-1318463 Msa0095900:CDS 45.0%
CAGCTGCATTCTTCAGGAAA+TGG + chr1_3:1318450-1318469 Msa0095900:CDS 45.0%
GCTGCATTCTTCAGGAAATG+GGG + chr1_3:1318452-1318471 Msa0095900:CDS 45.0%
AATGGGGAGAAGCCTTCAAT+AGG + chr1_3:1318468-1318487 Msa0095900:CDS 45.0%
ATAGGCAAGCTCTTTGAGCA+AGG + chr1_3:1318486-1318505 Msa0095900:CDS 45.0%
GTAGCAAATCTAGCTGCTGA+AGG + chr1_3:1318689-1318708 Msa0095900:CDS 45.0%
ACCATACTTAGAGTTGCTGC+AGG + chr1_3:1319133-1319152 Msa0095900:CDS 45.0%
ACCTGCAGCAACTCTAAGTA+TGG - chr1_3:1319137-1319156 None:intergenic 45.0%
GGCCATAATGAGTTCTTGGT+TGG - chr1_3:1319296-1319315 None:intergenic 45.0%
CTTGGGCCATAATGAGTTCT+TGG - chr1_3:1319300-1319319 None:intergenic 45.0%
CAAGAACTCATTATGGCCCA+AGG + chr1_3:1319298-1319317 Msa0095900:CDS 45.0%
AGAACTCATTATGGCCCAAG+GGG + chr1_3:1319300-1319319 Msa0095900:CDS 45.0%
AGATCCACAAACTCTTCGCA+TGG + chr1_3:1319360-1319379 Msa0095900:CDS 45.0%
AAACTCTTCGCATGGTTGCT+GGG + chr1_3:1319368-1319387 Msa0095900:CDS 45.0%
! TAGAAAAGACCCTTCTGGCT+AGG + chr1_3:1319522-1319541 Msa0095900:intron 45.0%
TGTACTACACCTAGCCAGAA+GGG - chr1_3:1319534-1319553 None:intergenic 45.0%
ATGTACTACACCTAGCCAGA+AGG - chr1_3:1319535-1319554 None:intergenic 45.0%
ACAGAATTAAGGGGTGAAGG+TGG + chr1_3:1319685-1319704 Msa0095900:CDS 45.0%
!! GAGTCAAGAGCATCTAGTCA+AGG + chr1_3:1319796-1319815 Msa0095900:CDS 45.0%
CGTGGTAGCTATGAAAACTG+TGG - chr1_3:1319903-1319922 None:intergenic 45.0%
! AGCTACCACGGTGCATATTT+TGG + chr1_3:1319913-1319932 Msa0095900:intron 45.0%
! GCTACCACGGTGCATATTTT+GGG + chr1_3:1319914-1319933 Msa0095900:intron 45.0%
CAAACCCAAAATATGCACCG+TGG - chr1_3:1319921-1319940 None:intergenic 45.0%
AATATGGCGCCTAATTGACG+AGG - chr1_3:1320082-1320101 None:intergenic 45.0%
GACAGAGTGCAAGCTCAATA+TGG - chr1_3:1320098-1320117 None:intergenic 45.0%
!! TCATTTCGGTTTGGAAAGCG+GGG - chr1_3:1320340-1320359 None:intergenic 45.0%
!! CTCATTTCGGTTTGGAAAGC+GGG - chr1_3:1320341-1320360 None:intergenic 45.0%
!! CCTCATTTCGGTTTGGAAAG+CGG - chr1_3:1320342-1320361 None:intergenic 45.0%
AAACCGAAATGAGGCGTATG+CGG + chr1_3:1320348-1320367 Msa0095900:CDS 45.0%
!! TTTGTAAAAAAAAAAAAAAA+TGG + chr1_3:1313260-1313279 Msa0095900:intron 5.0%
!! TTGTAAAAAAAAAAAAAAAT+GGG + chr1_3:1313261-1313280 Msa0095900:intron 5.0%
!! CGTGTAGAGTGTTGTTCGGA+AGG + chr1_3:1312273-1312292 Msa0095900:five_prime_UTR 50.0%
AGTCACATCTGTAGCGGTTG+CGG + chr1_3:1312322-1312341 Msa0095900:five_prime_UTR 50.0%
ATGTCCACCTTCTCTCAAGG+TGG + chr1_3:1312463-1312482 Msa0095900:CDS 50.0%
ACTTGCACCACCTTGAGAGA+AGG - chr1_3:1312473-1312492 None:intergenic 50.0%
TGTACACAGACCTCCACAAC+AGG - chr1_3:1313192-1313211 None:intergenic 50.0%
GTGTGAGGTGCATGAACATC+TGG + chr1_3:1313439-1313458 Msa0095900:intron 50.0%
!! TTTCTGGAGTGGTGTCGATG+TGG + chr1_3:1313513-1313532 Msa0095900:intron 50.0%
CATCCAGTACACTCTGCAGA+AGG - chr1_3:1313777-1313796 None:intergenic 50.0%
CTTCTGCAGAGTGTACTGGA+TGG + chr1_3:1313775-1313794 Msa0095900:intron 50.0%
ACCAGTACCAGTCTGTCCAT+AGG - chr1_3:1313821-1313840 None:intergenic 50.0%
TACTCTTGGAAGACTTGGGG+AGG + chr1_3:1313849-1313868 Msa0095900:CDS 50.0%
CACAGCTGCACGTGGAATAA+TGG + chr1_3:1313876-1313895 Msa0095900:CDS 50.0%
! AGCACAGCATCGGATATCTG+AGG + chr1_3:1316099-1316118 Msa0095900:CDS 50.0%
! GATTCCCAAGGTATCTGCTG+AGG + chr1_3:1316937-1316956 Msa0095900:intron 50.0%
GAATAGTCTTCCCACACACG+TGG - chr1_3:1318068-1318087 None:intergenic 50.0%
GACAAGTCGACAACTAGACG+AGG + chr1_3:1318371-1318390 Msa0095900:intron 50.0%
TGAAAAAGAAGTGGGCGGTC+GGG + chr1_3:1318401-1318420 Msa0095900:CDS 50.0%
TCAGGGGAGGATTGTAGAAG+CGG + chr1_3:1319063-1319082 Msa0095900:CDS 50.0%
GAACTCATTATGGCCCAAGG+GGG + chr1_3:1319301-1319320 Msa0095900:CDS 50.0%
CAGCAAACTAATGCCCCCTT+GGG - chr1_3:1319317-1319336 None:intergenic 50.0%
ACAGCAAACTAATGCCCCCT+TGG - chr1_3:1319318-1319337 None:intergenic 50.0%
GCAACCATGCGAAGAGTTTG+TGG - chr1_3:1319367-1319386 None:intergenic 50.0%
CAAACTCTTCGCATGGTTGC+TGG + chr1_3:1319367-1319386 Msa0095900:CDS 50.0%
AACTCTTCGCATGGTTGCTG+GGG + chr1_3:1319369-1319388 Msa0095900:CDS 50.0%
AAGGGGTGAAGGTGGTATCA+AGG + chr1_3:1319693-1319712 Msa0095900:CDS 50.0%
!! TATCAAGGCACTGCTGGGAA+TGG + chr1_3:1319708-1319727 Msa0095900:CDS 50.0%
!! GAAGAGCACCATCCTCGATA+AGG - chr1_3:1320029-1320048 None:intergenic 50.0%
CCAGAAATATCTCAGGGACG+TGG - chr1_3:1320188-1320207 None:intergenic 50.0%
CCACGTCCCTGAGATATTTC+TGG + chr1_3:1320185-1320204 Msa0095900:intron 50.0%
!! CGTCCCTGAGATATTTCTGG+TGG + chr1_3:1320188-1320207 Msa0095900:intron 50.0%
CCGCTTTCCAAACCGAAATG+AGG + chr1_3:1320339-1320358 Msa0095900:CDS 50.0%
GCATACGCCTCATTTCGGTT+TGG - chr1_3:1320349-1320368 None:intergenic 50.0%
AACCGAAATGAGGCGTATGC+GGG + chr1_3:1320349-1320368 Msa0095900:CDS 50.0%
ACATGCCAGAAGCTAGCAAG+TGG - chr1_3:1320600-1320619 None:intergenic 50.0%
TGCACCACCTTGAGAGAAGG+TGG - chr1_3:1312470-1312489 None:intergenic 55.0%
ATGATGGTCTTTGACGGCGC+CGG - chr1_3:1312599-1312618 None:intergenic 55.0%
AGTTGTGGCTAGGCCTGTTG+TGG + chr1_3:1313176-1313195 Msa0095900:CDS 55.0%
GCCTATGGACAGACTGGTAC+TGG + chr1_3:1313817-1313836 Msa0095900:CDS 55.0%
ACAGGAGTGGGGCATGACTT+TGG + chr1_3:1316624-1316643 Msa0095900:intron 55.0%
CTCGTGTCAATGGGAGACCA+TGG + chr1_3:1317941-1317960 Msa0095900:intron 55.0%
CAGGGGAGGATTGTAGAAGC+GGG + chr1_3:1319064-1319083 Msa0095900:CDS 55.0%
AGGGGAGGATTGTAGAAGCG+GGG + chr1_3:1319065-1319084 Msa0095900:CDS 55.0%
GGGGCCATTGCTAATCTCTG+TGG + chr1_3:1319388-1319407 Msa0095900:CDS 55.0%
!! AGGTGGTATCAAGGCACTGC+TGG + chr1_3:1319702-1319721 Msa0095900:CDS 55.0%
!! GGTGGTATCAAGGCACTGCT+GGG + chr1_3:1319703-1319722 Msa0095900:CDS 55.0%
ACATCCTGATGTGCATGCGC+AGG + chr1_3:1319741-1319760 Msa0095900:CDS 55.0%
TCGAGGATGGTGCTCTTCCA+TGG + chr1_3:1320031-1320050 Msa0095900:CDS 55.0%
!! TTCGGTTTGGAAAGCGGGGA+TGG - chr1_3:1320336-1320355 None:intergenic 55.0%
CACCCGCATACGCCTCATTT+CGG - chr1_3:1320354-1320373 None:intergenic 55.0%
TCAACGAGGTGGTGTCTCTC+TGG + chr1_3:1320573-1320592 Msa0095900:three_prime_UTR 55.0%
! CTGGTCCACTTGCTAGCTTC+TGG + chr1_3:1320592-1320611 Msa0095900:three_prime_UTR 55.0%
!! GGTGCGGCGTTGAGTTGGTT+TGG - chr1_3:1312569-1312588 None:intergenic 60.0%
TAGGCTGCGGCCACCAAATG+CGG + chr1_3:1312903-1312922 Msa0095900:CDS 60.0%
TGTGGCTAGGCCTGTTGTGG+AGG + chr1_3:1313179-1313198 Msa0095900:CDS 60.0%
GAGGAAGACACAGCTGCACG+TGG + chr1_3:1313868-1313887 Msa0095900:CDS 60.0%
TTGGACCCTCACCACGGCAT+AGG + chr1_3:1315655-1315674 Msa0095900:CDS 60.0%
TGGACCCTCACCACGGCATA+GGG + chr1_3:1315656-1315675 Msa0095900:CDS 60.0%
TCTCCCCTATGCCGTGGTGA+GGG - chr1_3:1315663-1315682 None:intergenic 60.0%
AAGTTGGGGCAGGGGGAATC+TGG + chr1_3:1316655-1316674 Msa0095900:intron 60.0%
GGGGAGGATTGTAGAAGCGG+GGG + chr1_3:1319066-1319085 Msa0095900:CDS 60.0%
GGGAGGATTGTAGAAGCGGG+GGG + chr1_3:1319067-1319086 Msa0095900:CDS 60.0%
GGAGGATTGTAGAAGCGGGG+GGG + chr1_3:1319068-1319087 Msa0095900:CDS 60.0%
GCAACCTGCGCATGCACATC+AGG - chr1_3:1319748-1319767 None:intergenic 60.0%
GGTTTGGAAAGCGGGGATGG+AGG - chr1_3:1320333-1320352 None:intergenic 60.0%
! GTGGTGGTGCGGCGTTGAGT+TGG - chr1_3:1312574-1312593 None:intergenic 65.0%
! ATGGTCTTTGACGGCGCCGG+TGG - chr1_3:1312596-1312615 None:intergenic 65.0%
GGACCCTCACCACGGCATAG+GGG + chr1_3:1315657-1315676 Msa0095900:CDS 65.0%
CTCTCCCCTATGCCGTGGTG+AGG - chr1_3:1315664-1315683 None:intergenic 65.0%
GCAGTCTCTCCCCTATGCCG+TGG - chr1_3:1315669-1315688 None:intergenic 65.0%
GTGCATGCGCAGGTTGCTCG+AGG + chr1_3:1319751-1319770 Msa0095900:CDS 65.0%
CAACGCCGCACCACCACCAC+CGG + chr1_3:1312577-1312596 Msa0095900:CDS 70.0%
!! TTTGACGGCGCCGGTGGTGG+TGG - chr1_3:1312590-1312609 None:intergenic 70.0%
!! GTCTTTGACGGCGCCGGTGG+TGG - chr1_3:1312593-1312612 None:intergenic 70.0%
!!! CGGCGCCGGTGGTGGTGGTG+CGG - chr1_3:1312585-1312604 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 1312236 1320846 1312236 ID=Msa0095900;Name=Msa0095900
chr1_3 mRNA 1312236 1320846 1312236 ID=Msa0095900-mRNA-1;Parent=Msa0095900;Name=Msa0095900-mRNA-1;_AED=0.06;_eAED=0.06;_QI=227|0.83|0.78|1|0.88|0.89|19|464|864
chr1_3 exon 1312236 1312625 1312236 ID=Msa0095900-mRNA-1:exon:234;Parent=Msa0095900-mRNA-1
chr1_3 exon 1312878 1312978 1312878 ID=Msa0095900-mRNA-1:exon:235;Parent=Msa0095900-mRNA-1
chr1_3 exon 1313078 1313200 1313078 ID=Msa0095900-mRNA-1:exon:236;Parent=Msa0095900-mRNA-1
chr1_3 exon 1313784 1313969 1313784 ID=Msa0095900-mRNA-1:exon:237;Parent=Msa0095900-mRNA-1
chr1_3 exon 1314131 1314352 1314131 ID=Msa0095900-mRNA-1:exon:238;Parent=Msa0095900-mRNA-1
chr1_3 exon 1314471 1314627 1314471 ID=Msa0095900-mRNA-1:exon:239;Parent=Msa0095900-mRNA-1
chr1_3 exon 1314926 1315075 1314926 ID=Msa0095900-mRNA-1:exon:240;Parent=Msa0095900-mRNA-1
chr1_3 exon 1315625 1315713 1315625 ID=Msa0095900-mRNA-1:exon:241;Parent=Msa0095900-mRNA-1
chr1_3 exon 1315947 1316150 1315947 ID=Msa0095900-mRNA-1:exon:242;Parent=Msa0095900-mRNA-1
chr1_3 exon 1316433 1316543 1316433 ID=Msa0095900-mRNA-1:exon:243;Parent=Msa0095900-mRNA-1
chr1_3 exon 1316977 1317069 1316977 ID=Msa0095900-mRNA-1:exon:244;Parent=Msa0095900-mRNA-1
chr1_3 exon 1317168 1317264 1317168 ID=Msa0095900-mRNA-1:exon:245;Parent=Msa0095900-mRNA-1
chr1_3 exon 1318388 1318507 1318388 ID=Msa0095900-mRNA-1:exon:246;Parent=Msa0095900-mRNA-1
chr1_3 exon 1318618 1318710 1318618 ID=Msa0095900-mRNA-1:exon:247;Parent=Msa0095900-mRNA-1
chr1_3 exon 1319056 1319181 1319056 ID=Msa0095900-mRNA-1:exon:248;Parent=Msa0095900-mRNA-1
chr1_3 exon 1319290 1319415 1319290 ID=Msa0095900-mRNA-1:exon:249;Parent=Msa0095900-mRNA-1
chr1_3 exon 1319674 1319817 1319674 ID=Msa0095900-mRNA-1:exon:250;Parent=Msa0095900-mRNA-1
chr1_3 exon 1320004 1320132 1320004 ID=Msa0095900-mRNA-1:exon:251;Parent=Msa0095900-mRNA-1
chr1_3 exon 1320222 1320846 1320222 ID=Msa0095900-mRNA-1:exon:252;Parent=Msa0095900-mRNA-1
chr1_3 five_prime_UTR 1312236 1312462 1312236 ID=Msa0095900-mRNA-1:five_prime_utr;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1312463 1312625 1312463 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1312878 1312978 1312878 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1313078 1313200 1313078 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1313784 1313969 1313784 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1314131 1314352 1314131 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1314471 1314627 1314471 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1314926 1315075 1314926 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1315625 1315713 1315625 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1315947 1316150 1315947 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1316433 1316543 1316433 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1316977 1317069 1316977 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1317168 1317264 1317168 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1318388 1318507 1318388 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1318618 1318710 1318618 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1319056 1319181 1319056 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1319290 1319415 1319290 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1319674 1319817 1319674 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1320004 1320132 1320004 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 CDS 1320222 1320382 1320222 ID=Msa0095900-mRNA-1:cds;Parent=Msa0095900-mRNA-1
chr1_3 three_prime_UTR 1320383 1320846 1320383 ID=Msa0095900-mRNA-1:three_prime_utr;Parent=Msa0095900-mRNA-1
Gene Sequence

>Msa0095900

ATGTCCACCTTCTCTCAAGGTGGTGCAAGTAGTAGTAACAGAAACGGTAACACTAACAGTAACACCAGAACCTCTTTGAAACAACCGTCGTCAAATGTCAAGTCCAAACCAACTCAACGCCGCACCACCACCACCGGCGCCGTCAAAGACCATCATACTTCTGTTCCTGGAAGAGTTAGAGTAGCTGTTAGGCTGCGGCCACCAAATGCGGAAGAATCAGTAGCGGATGCTGATTTTGCTGACTGTGTTGAATTACAGCCTGAGCTGAAAAGGTTAAAGCTTAGGAAGAACAATTGGGATGGAGAGACTTATGAATTTGATGAAGTGCTTACTGAATTCGCGTCGCAAAAACGTGTTTACGAAGTTGTGGCTAGGCCTGTTGTGGAGAGTGTACTGGATGGCTACAATGGGACAATTATGGCCTATGGACAGACTGGTACTGGTAAAACTTATACTCTTGGAAGACTTGGGGAGGAAGACACAGCTGCACGTGGAATAATGGTGCGAGCTATGGAAGATATTTTTGCTGATGTTTCCTTGGAAACTGATTCAATCTCAGTCTCATATTTGCAGCTTTATATGGAGACTATACAGGATCTGCTTGACCCTGCCAATGATAACATAGCCATTGTAGAAGATCCCAAAACTGGTGATGTTTCATTACCTGGAGCTACTCTAATCGAGATTAGGGACCAGCAGAGTTTTGTTGAACTACTAAGATTAGGAGAGGCTCACCGCTTTGCTGCAAATACGAAACTGAATACCGAATCTTCTAGAAGTCATGCTATTCTAATGGTGCATGTAAAGAGATCCGTCAAAGGAAGAGATGCTTCTCATTCAAGTGAAAATGGAAATCATTCACATATGGTCAAATCATTAAAGGCACCTATTGTTCGGAAAGCCAAGTTGGTTGTTGTAGATCTTGCTGGCTCAGAACGAATTGACAAATCAGGAAGTGAAGGACATATGTTAGAAGAAGCCAAATCCATCAATCTTTCTTTGAGTGCACTGGGGAAATGTATCAATTCACTTGCAGAGAATAGTGCGCATGTGCCATTTCGTGACTCAAAGCTTACTAGATTGTTACGTGATTCATTTGGAGGTACAGCAAGAACTTCACTTGTTATTACTATTGGACCCTCACCACGGCATAGGGGAGAGACTGCTAGTACTATAATGTTTGGACAAAGGGCTATGAAGGTGGAAAACATGATAAAATTGAAGGAGGAATTTGATTACAAAAGCTTATCAAGAAGGCTAGACATAGAATTAGATAAACTCATAATGGAACATGAAAGACAGCAGAAAGCATTTGAGGATGAGATTGAAAGGTTAGCTACTGAAGCACAGCATCGGATATCTGAGGCAGAAAGAAACTATGTAGATTCATTGGAGGAAAGATCAAAGTATCAGAAAGAATATATGGAGTCAGTTAAGAAGCTTGAAGAGAAGTTTTTGATGAATCAACGTAAGAATGAGGAGCCTAATATGAAATCAAGCATAGAGAAAATGCTTCAAAAAGAGACTCTTCTAAGAAAAGCCGCTGAAGGGGAAACAAATAATTTGAAGAATCATGTCGCTGAACTAAAACAGTCAGAGGCTTCAGCAAAGTCAGAGATATCAAAACTTCATAAGATGTTGGAAGATGAGGCTCATCAGAAAGAGAAACTTGAAGGCGAAATAGCAATATTACAAAACGAGGGAAGATTTGAAAAAGAAGTGGGCGGTCGGGATTCTCTCACTTCCCAAGTTAAGCATCAGCTGCATTCTTCAGGAAATGGGGAGAAGCCTTCAATAGGCAAGCTCTTTGAGCAAGTGGGATTGCAGAAGATTTTGTCATTGCTTGAAGCAGAAGATGCTGATGTGCGAATCCATGCTGTGAAAGTTGTAGCAAATCTAGCTGCTGAAGAAACAAATCAGGGGAGGATTGTAGAAGCGGGGGGGCTTACATCGTTGCTTACGCTGCTTAAGACCACACAAGATGAGACCATACTTAGAGTTGCTGCAGGTGCTATTGCAAATTTGGCAATGAATGAAACCAACCAAGAACTCATTATGGCCCAAGGGGGCATTAGTTTGCTGTCGATGACTGCAGCCAATGCTGAAGATCCACAAACTCTTCGCATGGTTGCTGGGGCCATTGCTAATCTCTGTGGAAATGATAAGCTACAAACAGAATTAAGGGGTGAAGGTGGTATCAAGGCACTGCTGGGAATGGTGAGATGCAGACATCCTGATGTGCATGCGCAGGTTGCTCGAGGAATAGCAAATTATGCGAAGTGTGAGTCAAGAGCATCTAGTCAAGGGTTAAAGAGTGGAAGATCTTTCCTTATCGAGGATGGTGCTCTTCCATGGATTGTTCAAAATGCAAATAACGAAGCCTCGTCAATTAGGCGCCATATTGAGCTTGCACTCTGTCATTTAGCACAACACGAAGCAAATGCAAGAGATATGATTAAAGGGGGTGCTTTATGGGAGCTAGTTCGTATCTCACGAGATTGCTCCAGAGAAGACATAAAGACTCTTGCACATCGAACACTAGCCTCCATCCCCGCTTTCCAAACCGAAATGAGGCGTATGCGGGTGAGTCGCTGA
Protein sequence

>Msa0095900

MSTFSQGGASSSNRNGNTNSNTRTSLKQPSSNVKSKPTQRRTTTTGAVKDHHTSVPGRVRVAVRLRPPNAEESVADADFADCVELQPELKRLKLRKNNWDGETYEFDEVLTEFASQKRVYEVVARPVVESVLDGYNGTIMAYGQTGTGKTYTLGRLGEEDTAARGIMVRAMEDIFADVSLETDSISVSYLQLYMETIQDLLDPANDNIAIVEDPKTGDVSLPGATLIEIRDQQSFVELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSVKGRDASHSSENGNHSHMVKSLKAPIVRKAKLVVVDLAGSERIDKSGSEGHMLEEAKSINLSLSALGKCINSLAENSAHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRAMKVENMIKLKEEFDYKSLSRRLDIELDKLIMEHERQQKAFEDEIERLATEAQHRISEAERNYVDSLEERSKYQKEYMESVKKLEEKFLMNQRKNEEPNMKSSIEKMLQKETLLRKAAEGETNNLKNHVAELKQSEASAKSEISKLHKMLEDEAHQKEKLEGEIAILQNEGRFEKEVGGRDSLTSQVKHQLHSSGNGEKPSIGKLFEQVGLQKILSLLEAEDADVRIHAVKVVANLAAEETNQGRIVEAGGLTSLLTLLKTTQDETILRVAAGAIANLAMNETNQELIMAQGGISLLSMTAANAEDPQTLRMVAGAIANLCGNDKLQTELRGEGGIKALLGMVRCRHPDVHAQVARGIANYAKCESRASSQGLKSGRSFLIEDGALPWIVQNANNEASSIRRHIELALCHLAQHEANARDMIKGGALWELVRISRDCSREDIKTLAHRTLASIPAFQTEMRRMRVSR*