Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637540 | XP_003610965.1 | 91.860 | 86 | 7 | 0 | 25 | 110 | 141 | 226 | 2.62e-46 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637540 | sp|Q9LPS1|HXK3_ARATH | 59.341 | 91 | 36 | 1 | 21 | 110 | 137 | 227 | 2.23e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0637540 | Msa0657970 | 0.828586 | 8.279558e-55 | -8.615850e-47 |
| Msa0637540 | Msa0717890 | 0.808528 | 2.963094e-50 | -8.615850e-47 |
| Msa0637540 | Msa0887990 | 0.816953 | 4.240004e-52 | -8.615850e-47 |
| Msa0637540 | Msa0909140 | 0.812088 | 5.055541e-51 | -8.615850e-47 |
| Msa0637540 | Msa1004840 | 0.800206 | 1.606874e-48 | -8.615850e-47 |
| Msa0637540 | Msa1082500 | 0.806823 | 6.820557e-50 | -8.615850e-47 |
| Msa0637540 | Msa1297290 | 0.802122 | 6.518002e-49 | -8.615850e-47 |
| Msa0637540 | Msa1385000 | 0.802803 | 4.716835e-49 | -8.615850e-47 |
| Msa0637540 | Msa1438250 | 0.812797 | 3.538520e-51 | -8.615850e-47 |
| Msa0399300 | Msa0637540 | 0.817998 | 2.465409e-52 | -8.615850e-47 |
| Msa0273660 | Msa0637540 | 0.804432 | 2.165960e-49 | -8.615850e-47 |
| Msa0326200 | Msa0637540 | 0.805653 | 1.203097e-49 | -8.615850e-47 |
| Msa0358960 | Msa0637540 | 0.812806 | 3.522352e-51 | -8.615850e-47 |
| Msa0484780 | Msa0637540 | 0.818553 | 1.845953e-52 | -8.615850e-47 |
| Msa0545200 | Msa0637540 | 0.803785 | 2.953386e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637540 | MtrunA17_Chr5g0396421 | 91.860 | 86 | 7 | 0 | 25 | 110 | 141 | 226 | 2.41e-50 | 166 |
| Msa0637540 | MtrunA17_Chr1g0156571 | 55.682 | 88 | 37 | 1 | 25 | 110 | 143 | 230 | 5.08e-26 | 100 |
| Msa0637540 | MtrunA17_Chr8g0389821 | 53.409 | 88 | 39 | 2 | 25 | 110 | 141 | 228 | 5.46e-22 | 89.0 |
| Msa0637540 | MtrunA17_Chr8g0340741 | 45.714 | 105 | 52 | 2 | 11 | 110 | 123 | 227 | 6.04e-22 | 89.0 |
| Msa0637540 | MtrunA17_Chr6g0487071 | 45.455 | 88 | 46 | 1 | 25 | 110 | 139 | 226 | 1.86e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637540 | AT1G50460.2 | 59.341 | 91 | 36 | 1 | 21 | 110 | 137 | 227 | 8.95e-30 | 109 |
| Msa0637540 | AT1G50460.3 | 59.341 | 91 | 36 | 1 | 21 | 110 | 61 | 151 | 1.43e-29 | 109 |
| Msa0637540 | AT1G50460.1 | 59.341 | 91 | 36 | 1 | 21 | 110 | 137 | 227 | 2.27e-29 | 110 |
| Msa0637540 | AT3G20040.1 | 57.609 | 92 | 37 | 1 | 21 | 110 | 137 | 228 | 1.01e-27 | 105 |
| Msa0637540 | AT1G47840.2 | 50.562 | 89 | 41 | 1 | 25 | 110 | 144 | 232 | 2.28e-22 | 89.7 |
| Msa0637540 | AT1G47840.1 | 50.562 | 89 | 41 | 1 | 25 | 110 | 144 | 232 | 3.71e-22 | 90.1 |
| Msa0637540 | AT4G29130.1 | 54.023 | 87 | 38 | 1 | 26 | 110 | 142 | 228 | 4.46e-22 | 89.7 |
| Msa0637540 | AT2G19860.2 | 53.409 | 88 | 39 | 1 | 25 | 110 | 32 | 119 | 2.82e-20 | 84.3 |
| Msa0637540 | AT2G19860.1 | 53.409 | 88 | 39 | 1 | 25 | 110 | 141 | 228 | 3.83e-20 | 84.3 |
Find 34 sgRNAs with CRISPR-Local
Find 491 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACACTACTCTTGTTTAT+TGG | 0.122133 | 4_3:-29242174 | None:intergenic |
| GAAACAGACATTTGTTTCAT+AGG | 0.324581 | 4_3:-29244096 | None:intergenic |
| CAGGAAGCATTTGCACGAAA+TGG | 0.346216 | 4_3:+29244356 | Msa0637540:CDS |
| AGATGTTGCAGCATGTTTGC+AGG | 0.362698 | 4_3:+29244337 | Msa0637540:CDS |
| CTCTCTGAATCGCGTCCAAC+TGG | 0.394223 | 4_3:+29237595 | Msa0637540:five_prime_UTR |
| TCCCATGACAGAAGCGAACT+TGG | 0.431438 | 4_3:+29244057 | Msa0637540:CDS |
| TGCAAAGCTGTTGGTGGTGT+TGG | 0.432850 | 4_3:+29242303 | Msa0637540:five_prime_UTR |
| GAAACAAATGTCTGTTTCCT+CGG | 0.440802 | 4_3:+29244101 | Msa0637540:CDS |
| AAACAGACATTTGTTTCATA+GGG | 0.475582 | 4_3:-29244095 | None:intergenic |
| GCTTCTGTCATGGGAAGTAT+TGG | 0.479638 | 4_3:-29244049 | None:intergenic |
| GAACTCATTGCTAAAGAAGA+TGG | 0.481112 | 4_3:+29244024 | Msa0637540:CDS |
| AGGCAGCTACATGCACATCT+AGG | 0.489720 | 4_3:-29244379 | None:intergenic |
| AAAACAGAGAACAAGGGTAA+AGG | 0.493647 | 4_3:+29242092 | Msa0637540:five_prime_UTR |
| AGATGTGCATGTAGCTGCCT+TGG | 0.494377 | 4_3:+29244382 | Msa0637540:CDS |
| AGCCAAGTTCGCTTCTGTCA+TGG | 0.505718 | 4_3:-29244059 | None:intergenic |
| AAACAAATGTCTGTTTCCTC+GGG | 0.506432 | 4_3:+29244102 | Msa0637540:CDS |
| CATGTGTTTAGAATGCAGAT+TGG | 0.506888 | 4_3:+29237561 | Msa0637540:intron |
| GCCAAGTTCGCTTCTGTCAT+GGG | 0.515125 | 4_3:-29244058 | None:intergenic |
| ACGGCGGCGGTGAAGATCGC+AGG | 0.526203 | 4_3:-29237290 | None:intergenic |
| AGACATTTGTTTCATAGGGA+AGG | 0.529304 | 4_3:-29244091 | None:intergenic |
| AAACAAGAGTAGTGTGAAGA+AGG | 0.535530 | 4_3:+29242179 | Msa0637540:five_prime_UTR |
| TGATTATAATAGCTTGGAGC+AGG | 0.546998 | 4_3:+29242381 | Msa0637540:CDS |
| GACGGCGACAACGAGATTGA+CGG | 0.561105 | 4_3:-29237309 | None:intergenic |
| AGGTGATGATTATAATAGCT+TGG | 0.565911 | 4_3:+29242375 | Msa0637540:CDS |
| ACTGTCTGCAAAGCTGTTGG+TGG | 0.576536 | 4_3:+29242297 | Msa0637540:five_prime_UTR |
| GTGACTAACCATATCTACAA+TGG | 0.594940 | 4_3:-29244154 | None:intergenic |
| GGAACTGTCTGCAAAGCTGT+TGG | 0.599504 | 4_3:+29242294 | Msa0637540:intron |
| CGATTCAGAGAGTCTTGTTG+AGG | 0.606005 | 4_3:-29237584 | None:intergenic |
| AGAGAACAAGGGTAAAGGAG+AGG | 0.625869 | 4_3:+29242097 | Msa0637540:five_prime_UTR |
| CCACTTGATTAAAATTCCCG+AGG | 0.628304 | 4_3:-29244118 | None:intergenic |
| GACAACGAGATTGACGGCGG+CGG | 0.658898 | 4_3:-29237303 | None:intergenic |
| TTCGACGGCGAGATCGACGA+CGG | 0.678228 | 4_3:-29237327 | None:intergenic |
| GTGGAGATTAGTGTGTTCGA+CGG | 0.686044 | 4_3:-29237342 | None:intergenic |
| GGCGACAACGAGATTGACGG+CGG | 0.695915 | 4_3:-29237306 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATATGATTAGAAAT+AGG | - | chr4_3:29240943-29240962 | None:intergenic | 10.0% |
| !! | ATTGTTTATAATTGTATATA+GGG | + | chr4_3:29242662-29242681 | Msa0637540:intron | 10.0% |
| !! | TTTAATATTGAAATTATTCA+TGG | + | chr4_3:29243307-29243326 | Msa0637540:intron | 10.0% |
| !!! | ATATTTCACAAATAATTTTA+TGG | - | chr4_3:29243563-29243582 | None:intergenic | 10.0% |
| !!! | AAATATATTCTAGAAATAGA+TGG | + | chr4_3:29237802-29237821 | Msa0637540:intron | 15.0% |
| !! | TCATATTAATCTATTCATAA+AGG | + | chr4_3:29238847-29238866 | Msa0637540:intron | 15.0% |
| !! | CATATTAATCTATTCATAAA+GGG | + | chr4_3:29238848-29238867 | Msa0637540:intron | 15.0% |
| !! | ATGTTGAAATGAATAAATAT+GGG | - | chr4_3:29239886-29239905 | None:intergenic | 15.0% |
| !!! | TGGTAATTTATTTTATTTAC+CGG | - | chr4_3:29240379-29240398 | None:intergenic | 15.0% |
| !! | ATACTTAAATGAAAATATGA+CGG | + | chr4_3:29241196-29241215 | Msa0637540:intron | 15.0% |
| !!! | AAACATTCAAATTTTTCATT+AGG | + | chr4_3:29242496-29242515 | Msa0637540:intron | 15.0% |
| !! | CTATATACAATTATAAACAA+TGG | - | chr4_3:29242663-29242682 | None:intergenic | 15.0% |
| !! | CATTGTTTATAATTGTATAT+AGG | + | chr4_3:29242661-29242680 | Msa0637540:intron | 15.0% |
| !!! | ATTTTTAACTACAAATAATG+AGG | + | chr4_3:29242985-29243004 | Msa0637540:intron | 15.0% |
| !!! | TTTTTAACTACAAATAATGA+GGG | + | chr4_3:29242986-29243005 | Msa0637540:intron | 15.0% |
| !! | CATATAATATTGCATATATT+TGG | + | chr4_3:29243057-29243076 | Msa0637540:intron | 15.0% |
| !! | TTTCAATATTAAAAAAACCA+AGG | - | chr4_3:29243300-29243319 | None:intergenic | 15.0% |
| !!! | TGAAACATTTTTATGATTTA+CGG | + | chr4_3:29243453-29243472 | Msa0637540:intron | 15.0% |
| !! | AAAAGAAAAGGTAATAAATT+TGG | - | chr4_3:29243759-29243778 | None:intergenic | 15.0% |
| !! | ATATCAAAGAAAACTTTAAT+AGG | - | chr4_3:29243840-29243859 | None:intergenic | 15.0% |
| !!! | TCTTAATTGATCTTTAAAAT+TGG | + | chr4_3:29244185-29244204 | Msa0637540:intron | 15.0% |
| !!! | TAAATTTAGTTTTAGAGAAA+AGG | + | chr4_3:29245184-29245203 | Msa0637540:intron | 15.0% |
| !!! | TTTTTTTTCTTTTTCTTTTG+AGG | + | chr4_3:29245298-29245317 | Msa0637540:intron | 15.0% |
| !!! | TTTGTCAAAGATTGTATTTT+TGG | + | chr4_3:29237643-29237662 | Msa0637540:intron | 20.0% |
| !!! | TTGTCAAAGATTGTATTTTT+GGG | + | chr4_3:29237644-29237663 | Msa0637540:intron | 20.0% |
| !! | GTTCTTGATTAAATCTTATA+TGG | - | chr4_3:29238176-29238195 | None:intergenic | 20.0% |
| !! | TAAGATTTAATCAAGAACAT+TGG | + | chr4_3:29238178-29238197 | Msa0637540:intron | 20.0% |
| !! | TTGTTAATTGTTAATTGACA+TGG | - | chr4_3:29238340-29238359 | None:intergenic | 20.0% |
| !!! | ATTTTCAATGTTGTGATTTT+TGG | - | chr4_3:29238921-29238940 | None:intergenic | 20.0% |
| !!! | TTTGACATGAAAATGATTTT+TGG | - | chr4_3:29239302-29239321 | None:intergenic | 20.0% |
| !!! | TTGAGAAAATTTCATGATTT+TGG | - | chr4_3:29239691-29239710 | None:intergenic | 20.0% |
| !! | CATGTTGAAATGAATAAATA+TGG | - | chr4_3:29239887-29239906 | None:intergenic | 20.0% |
| !! | AATTCATCAATTTCACAAAA+TGG | + | chr4_3:29239998-29240017 | Msa0637540:intron | 20.0% |
| !! | ATTCATCAATTTCACAAAAT+GGG | + | chr4_3:29239999-29240018 | Msa0637540:intron | 20.0% |
| !!! | AATTTATTTTATTTACCGGT+AGG | - | chr4_3:29240375-29240394 | None:intergenic | 20.0% |
| !! | AAAATAAATCTAGCGAAAAT+CGG | + | chr4_3:29240622-29240641 | Msa0637540:intron | 20.0% |
| !!! | TTTTTCCAGAAAATTACTTT+AGG | + | chr4_3:29240668-29240687 | Msa0637540:intron | 20.0% |
| !!! | TTTTGTCATATATATGCATT+GGG | - | chr4_3:29240785-29240804 | None:intergenic | 20.0% |
| !!! | TTTTTTGAACAATGATTCAA+TGG | + | chr4_3:29240964-29240983 | Msa0637540:intron | 20.0% |
| !!! | GTTAAGTTTTTTATTGCTAT+GGG | + | chr4_3:29241319-29241338 | Msa0637540:intron | 20.0% |
| !!! | TATATCATTTTTGAATCCAA+AGG | + | chr4_3:29242212-29242231 | Msa0637540:intron | 20.0% |
| !!! | TTTATTTACCATTTTTGAAG+TGG | - | chr4_3:29242248-29242267 | None:intergenic | 20.0% |
| !! | ACAAGAAAGTTTACAAAAAT+AGG | + | chr4_3:29242355-29242374 | Msa0637540:CDS | 20.0% |
| !! | CTATCTCTAATTATTCAAAA+AGG | + | chr4_3:29242407-29242426 | Msa0637540:intron | 20.0% |
| !! | ATTATGTATTCATATTTCCT+TGG | + | chr4_3:29243280-29243299 | Msa0637540:intron | 20.0% |
| !! | AAATTATTTGTGAAATATGC+AGG | + | chr4_3:29243565-29243584 | Msa0637540:intron | 20.0% |
| !!! | TGTTTTGTACATTTTCATAT+GGG | + | chr4_3:29243687-29243706 | Msa0637540:intron | 20.0% |
| !! | TATGAAAGAACATAATATCT+AGG | - | chr4_3:29243736-29243755 | None:intergenic | 20.0% |
| !! | TTTAACGTTATTACATGAAA+AGG | - | chr4_3:29243952-29243971 | None:intergenic | 20.0% |
| !!! | ATTTTAATCAAGTGGATAAA+AGG | + | chr4_3:29244126-29244145 | Msa0637540:CDS | 20.0% |
| !!! | TTTTAATCAAGTGGATAAAA+GGG | + | chr4_3:29244127-29244146 | Msa0637540:CDS | 20.0% |
| !! | GAAAAACAAATCATACAATT+GGG | - | chr4_3:29244428-29244447 | None:intergenic | 20.0% |
| !! | AGAAAAACAAATCATACAAT+TGG | - | chr4_3:29244429-29244448 | None:intergenic | 20.0% |
| !!! | ATGTTTTTGATCTAAATGTA+AGG | + | chr4_3:29244584-29244603 | Msa0637540:intron | 20.0% |
| !!! | AAAGTTTTTGCATAAAAGAA+GGG | - | chr4_3:29244652-29244671 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTTGCATAAAAGA+AGG | - | chr4_3:29244653-29244672 | None:intergenic | 20.0% |
| !! | AACTCTACTTTCATTTAATT+GGG | - | chr4_3:29244916-29244935 | None:intergenic | 20.0% |
| !! | AAACTCTACTTTCATTTAAT+TGG | - | chr4_3:29244917-29244936 | None:intergenic | 20.0% |
| !!! | ACATAGTGATTTGATATTTT+GGG | - | chr4_3:29245049-29245068 | None:intergenic | 20.0% |
| !!! | TACATAGTGATTTGATATTT+TGG | - | chr4_3:29245050-29245069 | None:intergenic | 20.0% |
| !!! | ACTGATAAGAATAATTTTGT+TGG | - | chr4_3:29245218-29245237 | None:intergenic | 20.0% |
| !!! | TTTTCTCTCCTTTTTTGATT+TGG | + | chr4_3:29237444-29237463 | Msa0637540:intron | 25.0% |
| ! | TAAAACAGCCAAATCAAAAA+AGG | - | chr4_3:29237455-29237474 | None:intergenic | 25.0% |
| ! | GTATTTATTGTCATGAGATT+TGG | - | chr4_3:29237921-29237940 | None:intergenic | 25.0% |
| ! | GATTGCATATATACAAGTAT+TGG | - | chr4_3:29238601-29238620 | None:intergenic | 25.0% |
| ! | ATTGTATATATGTTAAGTGG+TGG | - | chr4_3:29238636-29238655 | None:intergenic | 25.0% |
| ! | GTGATTGTATATATGTTAAG+TGG | - | chr4_3:29238639-29238658 | None:intergenic | 25.0% |
| !! | ACTATATGTTGCTTGAATTA+TGG | - | chr4_3:29238670-29238689 | None:intergenic | 25.0% |
| !!! | CAACTATATGTTGATTTATG+TGG | - | chr4_3:29238721-29238740 | None:intergenic | 25.0% |
| ! | AATTCCTTACAATCCAAATA+AGG | + | chr4_3:29238755-29238774 | Msa0637540:intron | 25.0% |
| ! | TGTGATATTTGTTCCTTATT+TGG | - | chr4_3:29238771-29238790 | None:intergenic | 25.0% |
| ! | ATTATGAGATGATGTATGAA+CGG | - | chr4_3:29238828-29238847 | None:intergenic | 25.0% |
| !!! | GCTTTAAAATGGTATTCATT+TGG | - | chr4_3:29239105-29239124 | None:intergenic | 25.0% |
| !!! | TAACTTGGTTTGCTTTAAAA+TGG | - | chr4_3:29239116-29239135 | None:intergenic | 25.0% |
| ! | ATGTTCTATGAGTTCAATTA+AGG | - | chr4_3:29239164-29239183 | None:intergenic | 25.0% |
| ! | AAGTTAAGAAACAATTCATG+AGG | + | chr4_3:29239191-29239210 | Msa0637540:intron | 25.0% |
| !!! | TTTTTGGTTTTTGAGTTATG+AGG | - | chr4_3:29239286-29239305 | None:intergenic | 25.0% |
| !! | AAATCATTTTCATGTCAAAC+CGG | + | chr4_3:29239303-29239322 | Msa0637540:intron | 25.0% |
| ! | TAAGTTGTAGATATTTGAGT+TGG | - | chr4_3:29239342-29239361 | None:intergenic | 25.0% |
| !!! | AAATTCCAGAAAGTGTTTAT+AGG | + | chr4_3:29239596-29239615 | Msa0637540:intron | 25.0% |
| !! | AAGTGTTTATAGGTTCTAAT+AGG | + | chr4_3:29239606-29239625 | Msa0637540:intron | 25.0% |
| !! | ATGTTACTTATGAATTTGTG+AGG | - | chr4_3:29239737-29239756 | None:intergenic | 25.0% |
| ! | ATTTCACAAAATGGGTAAAA+AGG | + | chr4_3:29240007-29240026 | Msa0637540:intron | 25.0% |
| ! | AAATGTTACTACTCACTTAA+CGG | + | chr4_3:29240327-29240346 | Msa0637540:intron | 25.0% |
| !! | GTAATTTTGTAATTTGGTTG+AGG | - | chr4_3:29240455-29240474 | None:intergenic | 25.0% |
| !! | GTAAGGGTAATTTTGTAATT+TGG | - | chr4_3:29240461-29240480 | None:intergenic | 25.0% |
| !!! | TTTTAGTCATTTTGGACTTA+GGG | - | chr4_3:29240504-29240523 | None:intergenic | 25.0% |
| !!! | ATTTTAGTCATTTTGGACTT+AGG | - | chr4_3:29240505-29240524 | None:intergenic | 25.0% |
| ! | AAATAAATCTAGCGAAAATC+GGG | + | chr4_3:29240623-29240642 | Msa0637540:intron | 25.0% |
| !! | CTTTTGTCATATATATGCAT+TGG | - | chr4_3:29240786-29240805 | None:intergenic | 25.0% |
| ! | CAATGCATATATATGACAAA+AGG | + | chr4_3:29240784-29240803 | Msa0637540:intron | 25.0% |
| ! | CATATTAACGTATAATCAAC+CGG | + | chr4_3:29240891-29240910 | Msa0637540:intron | 25.0% |
| ! | ATATTAACGTATAATCAACC+GGG | + | chr4_3:29240892-29240911 | Msa0637540:intron | 25.0% |
| ! | ATAAGTCTAATTTCTGACTA+CGG | + | chr4_3:29241131-29241150 | Msa0637540:intron | 25.0% |
| ! | ATAAAAAACTTAACCATCAC+AGG | - | chr4_3:29241313-29241332 | None:intergenic | 25.0% |
| !!! | GGTTAAGTTTTTTATTGCTA+TGG | + | chr4_3:29241318-29241337 | Msa0637540:intron | 25.0% |
| ! | GGTTAAACCTAAAATGATAA+TGG | + | chr4_3:29241384-29241403 | Msa0637540:intron | 25.0% |
| !!! | TAAAACTATAGGGTTTGTTT+TGG | + | chr4_3:29241557-29241576 | Msa0637540:intron | 25.0% |
| ! | TTATGTGTAAACTGTTTCAA+TGG | + | chr4_3:29241683-29241702 | Msa0637540:intron | 25.0% |
| ! | TGTGAAGATGTAGATTTAAT+TGG | - | chr4_3:29242059-29242078 | None:intergenic | 25.0% |
| !!! | TAACAAAACATGTTTTCAAG+AGG | + | chr4_3:29242273-29242292 | Msa0637540:intron | 25.0% |
| ! | AGAGCTTAATGTCAAAAAAT+GGG | - | chr4_3:29242434-29242453 | None:intergenic | 25.0% |
| ! | AAGAGCTTAATGTCAAAAAA+TGG | - | chr4_3:29242435-29242454 | None:intergenic | 25.0% |
| ! | GCATATTTGCAATTATTGAT+TGG | + | chr4_3:29242552-29242571 | Msa0637540:intron | 25.0% |
| ! | AGTTTATCCTTAGAATGTAA+TGG | + | chr4_3:29242743-29242762 | Msa0637540:intron | 25.0% |
| !! | TTCTTTTCCATTACATTCTA+AGG | - | chr4_3:29242753-29242772 | None:intergenic | 25.0% |
| ! | TGATAGTTTATGTCTAACAA+AGG | + | chr4_3:29242781-29242800 | Msa0637540:intron | 25.0% |
| !! | GAGTGATTTGTATTTCTATT+TGG | + | chr4_3:29243192-29243211 | Msa0637540:intron | 25.0% |
| !! | TTCTATTTGGCATTTGTTAA+AGG | + | chr4_3:29243205-29243224 | Msa0637540:intron | 25.0% |
| !! | GCATTTGTTAAAGGAAATAA+GGG | + | chr4_3:29243214-29243233 | Msa0637540:intron | 25.0% |
| ! | TTCTTTACTCTTAACTGTTA+TGG | + | chr4_3:29243244-29243263 | Msa0637540:intron | 25.0% |
| !! | ATTATTCATGGATTGTATGT+AGG | + | chr4_3:29243319-29243338 | Msa0637540:intron | 25.0% |
| !!! | TGGTTAGTTTATACTTTTCT+TGG | + | chr4_3:29243397-29243416 | Msa0637540:intron | 25.0% |
| ! | AAAACATGAGTTTCATTATC+AGG | - | chr4_3:29243423-29243442 | None:intergenic | 25.0% |
| ! | TGTTGAATACAAATGAACAT+GGG | - | chr4_3:29243519-29243538 | None:intergenic | 25.0% |
| ! | ATGTTGAATACAAATGAACA+TGG | - | chr4_3:29243520-29243539 | None:intergenic | 25.0% |
| !! | CTGTTTTGTACATTTTCATA+TGG | + | chr4_3:29243686-29243705 | Msa0637540:intron | 25.0% |
| ! | ATACAGACATGAAAAAGAAA+AGG | - | chr4_3:29243771-29243790 | None:intergenic | 25.0% |
| !!! | TCTTTGATATCTGTTTTTCA+AGG | + | chr4_3:29243850-29243869 | Msa0637540:intron | 25.0% |
| !! | AAATTGAATTTTATGCTTGC+AGG | + | chr4_3:29243969-29243988 | Msa0637540:intron | 25.0% |
| ! | AAACAGACATTTGTTTCATA+GGG | - | chr4_3:29244098-29244117 | None:intergenic | 25.0% |
| !! | GTTTGTTTGGTAACTATTTA+TGG | - | chr4_3:29244229-29244248 | None:intergenic | 25.0% |
| ! | AGAAAAAAACAATCTGTTGA+AGG | - | chr4_3:29244553-29244572 | None:intergenic | 25.0% |
| !!! | TCAACAGATTGTTTTTTTCT+AGG | + | chr4_3:29244553-29244572 | Msa0637540:intron | 25.0% |
| !!! | ATGTTTTTGACAGAAGATTT+TGG | + | chr4_3:29244712-29244731 | Msa0637540:intron | 25.0% |
| !!! | GGGAGTTATTTTTTATTTTC+TGG | + | chr4_3:29244862-29244881 | Msa0637540:intron | 25.0% |
| !! | CATAGTGATTTGATATTTTG+GGG | - | chr4_3:29245048-29245067 | None:intergenic | 25.0% |
| !!! | TTTCTTTTTCTTTTGAGGAT+AGG | + | chr4_3:29245303-29245322 | Msa0637540:intron | 25.0% |
| GAAACACAGGAAAAAAATTC+TGG | - | chr4_3:29237524-29237543 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTCCTGTGTTTCGA+TGG | + | chr4_3:29237526-29237545 | Msa0637540:intron | 30.0% |
| AAAAAAAAACCCATACCAGT+TGG | - | chr4_3:29237613-29237632 | None:intergenic | 30.0% | |
| !!! | TTTTTGGGTTCATGCAATTT+TGG | + | chr4_3:29237659-29237678 | Msa0637540:intron | 30.0% |
| TTTACCGCTTATTAGAAGTA+GGG | - | chr4_3:29237769-29237788 | None:intergenic | 30.0% | |
| ! | TTTTACCGCTTATTAGAAGT+AGG | - | chr4_3:29237770-29237789 | None:intergenic | 30.0% |
| AAGTCTCATAAACATAGAAG+CGG | + | chr4_3:29237867-29237886 | Msa0637540:intron | 30.0% | |
| TTTGCTTTGACTATGTAGTT+TGG | - | chr4_3:29237972-29237991 | None:intergenic | 30.0% | |
| ATGTGCAAGTGTCTATATTA+GGG | - | chr4_3:29238027-29238046 | None:intergenic | 30.0% | |
| TATGTGCAAGTGTCTATATT+AGG | - | chr4_3:29238028-29238047 | None:intergenic | 30.0% | |
| ATAGACACTTGCACATAAAA+AGG | + | chr4_3:29238031-29238050 | Msa0637540:intron | 30.0% | |
| TTCACCAACAATGTATGTAA+TGG | + | chr4_3:29238395-29238414 | Msa0637540:intron | 30.0% | |
| ! | GTGGATTTTATATCCAATTG+AGG | - | chr4_3:29238500-29238519 | None:intergenic | 30.0% |
| TGCTTGAATTATGGATATTG+TGG | - | chr4_3:29238661-29238680 | None:intergenic | 30.0% | |
| TTGATTTATGTGGAGATGAT+TGG | - | chr4_3:29238711-29238730 | None:intergenic | 30.0% | |
| TAAGGAATTATGTGGAAATG+CGG | - | chr4_3:29238744-29238763 | None:intergenic | 30.0% | |
| TTGGATTGTAAGGAATTATG+TGG | - | chr4_3:29238752-29238771 | None:intergenic | 30.0% | |
| ! | TGTTCCTTATTTGGATTGTA+AGG | - | chr4_3:29238762-29238781 | None:intergenic | 30.0% |
| ATAAAGGGTTCATAAGCAAT+TGG | + | chr4_3:29238863-29238882 | Msa0637540:intron | 30.0% | |
| ATGTGACTTATGAGAATACA+TGG | - | chr4_3:29238992-29239011 | None:intergenic | 30.0% | |
| AGGTTACATAAGCATTTCAT+CGG | + | chr4_3:29239025-29239044 | Msa0637540:intron | 30.0% | |
| TTTCATGAATCCGTCATATT+TGG | - | chr4_3:29239051-29239070 | None:intergenic | 30.0% | |
| !! | ATGATGTGATGGATTTAACT+TGG | - | chr4_3:29239131-29239150 | None:intergenic | 30.0% |
| GTGTTTAAACTATGATGTGA+TGG | - | chr4_3:29239142-29239161 | None:intergenic | 30.0% | |
| AAGAAACAATTCATGAGGTT+TGG | + | chr4_3:29239196-29239215 | Msa0637540:intron | 30.0% | |
| AGAAACAATTCATGAGGTTT+GGG | + | chr4_3:29239197-29239216 | Msa0637540:intron | 30.0% | |
| TCGACTTAGAAATAGTTATG+CGG | + | chr4_3:29239220-29239239 | Msa0637540:intron | 30.0% | |
| ATGAGGAAAATACTCTTAAG+AGG | - | chr4_3:29239269-29239288 | None:intergenic | 30.0% | |
| !! | GATTTGAAATGGGGATTTTT+GGG | - | chr4_3:29239560-29239579 | None:intergenic | 30.0% |
| !!! | GAATTTGTTTTGGTGAATTG+GGG | - | chr4_3:29239582-29239601 | None:intergenic | 30.0% |
| !!! | GGAATTTGTTTTGGTGAATT+GGG | - | chr4_3:29239583-29239602 | None:intergenic | 30.0% |
| !!! | TGGAATTTGTTTTGGTGAAT+TGG | - | chr4_3:29239584-29239603 | None:intergenic | 30.0% |
| !!! | ACACTTTCTGGAATTTGTTT+TGG | - | chr4_3:29239592-29239611 | None:intergenic | 30.0% |
| TAGAACCTATAAACACTTTC+TGG | - | chr4_3:29239604-29239623 | None:intergenic | 30.0% | |
| TTGAGCTATTGGAATTGAAT+TGG | - | chr4_3:29239771-29239790 | None:intergenic | 30.0% | |
| ! | TGTTCATTAGTTGTTGTTGA+TGG | - | chr4_3:29239797-29239816 | None:intergenic | 30.0% |
| TGCACGAATTTACAACATTT+AGG | + | chr4_3:29239972-29239991 | Msa0637540:intron | 30.0% | |
| TCTCTATCAATTGCAAATGT+TGG | + | chr4_3:29240200-29240219 | Msa0637540:intron | 30.0% | |
| CTCTTGTTAGTAGAGAAAAT+AGG | - | chr4_3:29240232-29240251 | None:intergenic | 30.0% | |
| ! | CTATTTTCTCTACTAACAAG+AGG | + | chr4_3:29240230-29240249 | Msa0637540:intron | 30.0% |
| CTACTAACAAGAGGATATAT+AGG | + | chr4_3:29240239-29240258 | Msa0637540:intron | 30.0% | |
| ATATATAGGTCCTATGTAAC+TGG | + | chr4_3:29240253-29240272 | Msa0637540:intron | 30.0% | |
| TATATAGGTCCTATGTAACT+GGG | + | chr4_3:29240254-29240273 | Msa0637540:intron | 30.0% | |
| TTTGTGGTTGGAATAGAAAT+GGG | - | chr4_3:29240309-29240328 | None:intergenic | 30.0% | |
| ! | TTTTGTGGTTGGAATAGAAA+TGG | - | chr4_3:29240310-29240329 | None:intergenic | 30.0% |
| ! | AAGTGAGTAGTAACATTTTG+TGG | - | chr4_3:29240325-29240344 | None:intergenic | 30.0% |
| ACGGTAAAATGTAACACTAA+CGG | + | chr4_3:29240346-29240365 | Msa0637540:intron | 30.0% | |
| !!! | TGGTTGAGGATTATTTTTAG+TGG | - | chr4_3:29240441-29240460 | None:intergenic | 30.0% |
| !! | TTTGGTCATTTTGAGAGTAA+GGG | - | chr4_3:29240477-29240496 | None:intergenic | 30.0% |
| !! | TTTTGGTCATTTTGAGAGTA+AGG | - | chr4_3:29240478-29240497 | None:intergenic | 30.0% |
| !! | TTTAGTCATTTTGGACTTAG+GGG | - | chr4_3:29240503-29240522 | None:intergenic | 30.0% |
| !!! | GAAGGGTATTTTAGTCATTT+TGG | - | chr4_3:29240512-29240531 | None:intergenic | 30.0% |
| TGTAGAATTCGGTATTAGAA+GGG | - | chr4_3:29240529-29240548 | None:intergenic | 30.0% | |
| TTGTAGAATTCGGTATTAGA+AGG | - | chr4_3:29240530-29240549 | None:intergenic | 30.0% | |
| ! | AGAAGCCTAAAGTAATTTTC+TGG | - | chr4_3:29240676-29240695 | None:intergenic | 30.0% |
| TTGTTCATTAGTGATATTCC+AGG | + | chr4_3:29240697-29240716 | Msa0637540:intron | 30.0% | |
| CATACTAATTTCCCTAGATT+GGG | + | chr4_3:29241350-29241369 | Msa0637540:intron | 30.0% | |
| TTTCATAATCACCCAATCTA+GGG | - | chr4_3:29241364-29241383 | None:intergenic | 30.0% | |
| !! | AACCTAAAATGATAATGGCA+AGG | + | chr4_3:29241389-29241408 | Msa0637540:intron | 30.0% |
| TTGAAGCAAATCAATGTATC+AGG | - | chr4_3:29241416-29241435 | None:intergenic | 30.0% | |
| !! | ACTCATGTCTCTAAAACTAT+AGG | + | chr4_3:29241546-29241565 | Msa0637540:intron | 30.0% |
| !! | CTCATGTCTCTAAAACTATA+GGG | + | chr4_3:29241547-29241566 | Msa0637540:intron | 30.0% |
| ATAAATCTACTGCCACTAAT+AGG | - | chr4_3:29241633-29241652 | None:intergenic | 30.0% | |
| AACTATATTAGACAACACTG+AGG | - | chr4_3:29241662-29241681 | None:intergenic | 30.0% | |
| TGTTAACCTGAAAATCAATC+AGG | - | chr4_3:29241858-29241877 | None:intergenic | 30.0% | |
| ! | TTCAGGTTAACAATCTAAAG+AGG | + | chr4_3:29241866-29241885 | Msa0637540:intron | 30.0% |
| ! | AACAATCTAAAGAGGCATAT+AGG | + | chr4_3:29241874-29241893 | Msa0637540:intron | 30.0% |
| TAGATATGAATCTTTGTGAG+TGG | + | chr4_3:29241970-29241989 | Msa0637540:intron | 30.0% | |
| GAAGATGTAGATTTAATTGG+AGG | - | chr4_3:29242056-29242075 | None:intergenic | 30.0% | |
| ATCTACATCTTCACAACTAT+TGG | + | chr4_3:29242064-29242083 | Msa0637540:intron | 30.0% | |
| ! | TTCACACTACTCTTGTTTAT+TGG | - | chr4_3:29242177-29242196 | None:intergenic | 30.0% |
| AGGTGATGATTATAATAGCT+TGG | + | chr4_3:29242375-29242394 | Msa0637540:CDS | 30.0% | |
| TATGACAAACAACAATGTTC+AGG | + | chr4_3:29242458-29242477 | Msa0637540:intron | 30.0% | |
| TGTTCAGGTCTTGAATAATT+TGG | + | chr4_3:29242473-29242492 | Msa0637540:intron | 30.0% | |
| ATTAGGTGAAAATGATTGCA+TGG | + | chr4_3:29242513-29242532 | Msa0637540:intron | 30.0% | |
| GATGAAGACATAGAGAAAAT+TGG | - | chr4_3:29242901-29242920 | None:intergenic | 30.0% | |
| TAGAAGCAATATAAGAGAAG+CGG | + | chr4_3:29242934-29242953 | Msa0637540:intron | 30.0% | |
| TTAACTACAAATAATGAGGG+AGG | + | chr4_3:29242989-29243008 | Msa0637540:intron | 30.0% | |
| TAACTACAAATAATGAGGGA+GGG | + | chr4_3:29242990-29243009 | Msa0637540:intron | 30.0% | |
| TTAGACAAAATTGCAAGCAT+CGG | - | chr4_3:29243109-29243128 | None:intergenic | 30.0% | |
| ! | ATGCTTGCAATTTTGTCTAA+TGG | + | chr4_3:29243109-29243128 | Msa0637540:intron | 30.0% |
| ! | GGCATTTGTTAAAGGAAATA+AGG | + | chr4_3:29243213-29243232 | Msa0637540:intron | 30.0% |
| !!! | ATTTTTTGTCCCAAATGCTA+TGG | + | chr4_3:29243355-29243374 | Msa0637540:intron | 30.0% |
| TGAGAAATATGTTGTAGATC+AGG | + | chr4_3:29243595-29243614 | Msa0637540:intron | 30.0% | |
| GAAACAGACATTTGTTTCAT+AGG | - | chr4_3:29244099-29244118 | None:intergenic | 30.0% | |
| ATAGGACATACATGTTTGTT+TGG | - | chr4_3:29244242-29244261 | None:intergenic | 30.0% | |
| CAAATCATACAATTGGGATA+AGG | - | chr4_3:29244422-29244441 | None:intergenic | 30.0% | |
| ATCCTGGTTGTGTAAATATA+AGG | - | chr4_3:29244490-29244509 | None:intergenic | 30.0% | |
| ATATTTACACAACCAGGATT+AGG | + | chr4_3:29244491-29244510 | Msa0637540:intron | 30.0% | |
| TATTTACACAACCAGGATTA+GGG | + | chr4_3:29244492-29244511 | Msa0637540:intron | 30.0% | |
| TATGTATTATACCCTAATCC+TGG | - | chr4_3:29244506-29244525 | None:intergenic | 30.0% | |
| AAAAAACAATCTGTTGAAGG+CGG | - | chr4_3:29244550-29244569 | None:intergenic | 30.0% | |
| TAAAGTACAAGATGTGCTAA+AGG | - | chr4_3:29244789-29244808 | None:intergenic | 30.0% | |
| TAGTACTTATCTTGATCTTG+AGG | + | chr4_3:29244841-29244860 | Msa0637540:intron | 30.0% | |
| AGTACTTATCTTGATCTTGA+GGG | + | chr4_3:29244842-29244861 | Msa0637540:intron | 30.0% | |
| GAGTTTAATAGAAGACTAAG+AGG | + | chr4_3:29244931-29244950 | Msa0637540:intron | 30.0% | |
| TGGACTTTCATTATATGTCA+TGG | - | chr4_3:29245111-29245130 | None:intergenic | 30.0% | |
| TTTAGTTGTAAAGTGAGAGT+TGG | - | chr4_3:29245131-29245150 | None:intergenic | 30.0% | |
| GTTGAATACAGAATAGATTC+AGG | + | chr4_3:29245250-29245269 | Msa0637540:intron | 30.0% | |
| CTGAAAAAGATGATGAACAG+TGG | - | chr4_3:29237364-29237383 | None:intergenic | 35.0% | |
| ! | CATGTGTTTAGAATGCAGAT+TGG | + | chr4_3:29237561-29237580 | Msa0637540:intron | 35.0% |
| ! | CAATTTTGGATTTTCACGAC+AGG | + | chr4_3:29237673-29237692 | Msa0637540:intron | 35.0% |
| !! | GGCATTTCAAGTTGCAATAA+TGG | + | chr4_3:29237706-29237725 | Msa0637540:intron | 35.0% |
| !! | CAAGTTGCAATAATGGATAC+AGG | + | chr4_3:29237713-29237732 | Msa0637540:intron | 35.0% |
| AACACCCTACTTCTAATAAG+CGG | + | chr4_3:29237762-29237781 | Msa0637540:intron | 35.0% | |
| !! | TGTCTTGCTTTTGTTTGATG+AGG | - | chr4_3:29237830-29237849 | None:intergenic | 35.0% |
| TATATTAGGGCTCAGATCTA+GGG | - | chr4_3:29238014-29238033 | None:intergenic | 35.0% | |
| ! | TACACTTGTTGATACGAACT+TGG | - | chr4_3:29238294-29238313 | None:intergenic | 35.0% |
| ! | AGTGCCATTACATACATTGT+TGG | - | chr4_3:29238402-29238421 | None:intergenic | 35.0% |
| AACATCGTAATCACCTCAAT+TGG | + | chr4_3:29238484-29238503 | Msa0637540:intron | 35.0% | |
| !! | TACAAGTATTGGTGATGTTG+AGG | - | chr4_3:29238590-29238609 | None:intergenic | 35.0% |
| ! | GGCAATTAAGCTTGTTTACT+TGG | - | chr4_3:29238965-29238984 | None:intergenic | 35.0% |
| CTTATGAGAATACATGGCAT+AGG | - | chr4_3:29238986-29239005 | None:intergenic | 35.0% | |
| ATTTCATCGGCCAAATATGA+CGG | + | chr4_3:29239038-29239057 | Msa0637540:intron | 35.0% | |
| !!! | TTCTGTTTTGATCTGGCTTT+TGG | - | chr4_3:29239375-29239394 | None:intergenic | 35.0% |
| !! | GGATTTGAAATGGGGATTTT+TGG | - | chr4_3:29239561-29239580 | None:intergenic | 35.0% |
| ! | TGAATTGGGGATTTGAAATG+GGG | - | chr4_3:29239569-29239588 | None:intergenic | 35.0% |
| ! | GTGAATTGGGGATTTGAAAT+GGG | - | chr4_3:29239570-29239589 | None:intergenic | 35.0% |
| TGAATTTGTGAGGAGATTTG+TGG | - | chr4_3:29239727-29239746 | None:intergenic | 35.0% | |
| TGGAATTGAATTGGTGTAAC+TGG | - | chr4_3:29239762-29239781 | None:intergenic | 35.0% | |
| !! | GTTGATGGTTATTGAGCTAT+TGG | - | chr4_3:29239782-29239801 | None:intergenic | 35.0% |
| TGAGCAAATTTGATGAGAAG+TGG | - | chr4_3:29239850-29239869 | None:intergenic | 35.0% | |
| TAGGAGCTAAATTGAAGCTT+GGG | - | chr4_3:29240094-29240113 | None:intergenic | 35.0% | |
| AGAAGAGGAATTCATCATCT+AGG | - | chr4_3:29240113-29240132 | None:intergenic | 35.0% | |
| AAAGAACAAGAGAAAGAGGT+TGG | - | chr4_3:29240147-29240166 | None:intergenic | 35.0% | |
| AGAGAAAGAACAAGAGAAAG+AGG | - | chr4_3:29240151-29240170 | None:intergenic | 35.0% | |
| AGAGATAGAGAGAGAAGAAA+GGG | - | chr4_3:29240179-29240198 | None:intergenic | 35.0% | |
| TAGAGATAGAGAGAGAAGAA+AGG | - | chr4_3:29240180-29240199 | None:intergenic | 35.0% | |
| TTAACCCACAACACCTTAAT+GGG | + | chr4_3:29240278-29240297 | Msa0637540:intron | 35.0% | |
| ! | GAGTAGTAACATTTTGTGGT+TGG | - | chr4_3:29240321-29240340 | None:intergenic | 35.0% |
| TACTATGTTACTAGAGAGTG+TGG | - | chr4_3:29240399-29240418 | None:intergenic | 35.0% | |
| !! | TTTTTAGTGGTTAGTGAGAG+TGG | - | chr4_3:29240428-29240447 | None:intergenic | 35.0% |
| TGGTTGGGAATTGTAGAATT+CGG | - | chr4_3:29240540-29240559 | None:intergenic | 35.0% | |
| !!! | CTCTGTGTGTATTTTTGGTT+GGG | - | chr4_3:29240555-29240574 | None:intergenic | 35.0% |
| ! | TTTGCCTCTGTGTGTATTTT+TGG | - | chr4_3:29240560-29240579 | None:intergenic | 35.0% |
| TTCATTAGTGATATTCCAGG+AGG | + | chr4_3:29240700-29240719 | Msa0637540:intron | 35.0% | |
| ! | TTTTTAACCAAATCACCTCC+TGG | - | chr4_3:29240718-29240737 | None:intergenic | 35.0% |
| ACAGATCACATGTATTGTCT+AGG | - | chr4_3:29240841-29240860 | None:intergenic | 35.0% | |
| AAAAAATTACCACGTGATGC+AGG | - | chr4_3:29241010-29241029 | None:intergenic | 35.0% | |
| ! | TTACTGTTGCTTGACTGATA+AGG | + | chr4_3:29241029-29241048 | Msa0637540:intron | 35.0% |
| ! | TTGACTGATAAGGCTTCTTT+TGG | + | chr4_3:29241039-29241058 | Msa0637540:intron | 35.0% |
| !!! | GTCATTGGAGGTTTTGAATA+TGG | + | chr4_3:29241094-29241113 | Msa0637540:intron | 35.0% |
| AAATGAAAATATGACGGCCA+TGG | + | chr4_3:29241202-29241221 | Msa0637540:intron | 35.0% | |
| TTCCTGCTCTTCATATTGAT+TGG | + | chr4_3:29241284-29241303 | Msa0637540:intron | 35.0% | |
| GCATACTAATTTCCCTAGAT+TGG | + | chr4_3:29241349-29241368 | Msa0637540:intron | 35.0% | |
| CTTTCATAATCACCCAATCT+AGG | - | chr4_3:29241365-29241384 | None:intergenic | 35.0% | |
| CTAGATTGGGTGATTATGAA+AGG | + | chr4_3:29241363-29241382 | Msa0637540:intron | 35.0% | |
| ! | GACCTTGCCATTATCATTTT+AGG | - | chr4_3:29241394-29241413 | None:intergenic | 35.0% |
| CAATCCTTATGTCGATCTTA+AGG | + | chr4_3:29241433-29241452 | Msa0637540:intron | 35.0% | |
| ATGTCCTTAAGATCGACATA+AGG | - | chr4_3:29241440-29241459 | None:intergenic | 35.0% | |
| TTGTCAAAGAGAAAACCTGA+TGG | + | chr4_3:29241714-29241733 | Msa0637540:intron | 35.0% | |
| ATGCTCCATAGTATACAGTT+TGG | + | chr4_3:29241747-29241766 | Msa0637540:intron | 35.0% | |
| TGCTCCATAGTATACAGTTT+GGG | + | chr4_3:29241748-29241767 | Msa0637540:intron | 35.0% | |
| TCTTCCCAAACTGTATACTA+TGG | - | chr4_3:29241755-29241774 | None:intergenic | 35.0% | |
| ACAGTTTGGGAAGAAAACAA+AGG | + | chr4_3:29241761-29241780 | Msa0637540:intron | 35.0% | |
| ! | GCTGATAGAGTATTACCATA+TGG | + | chr4_3:29241791-29241810 | Msa0637540:intron | 35.0% |
| ! | AGAGTATTACCATATGGAAC+AGG | + | chr4_3:29241797-29241816 | Msa0637540:intron | 35.0% |
| AAATCAATCAGGAATAGCAG+AGG | - | chr4_3:29241847-29241866 | None:intergenic | 35.0% | |
| !! | GCTATTCCTGATTGATTTTC+AGG | + | chr4_3:29241849-29241868 | Msa0637540:intron | 35.0% |
| ACATGATGATCTGATCCATA+TGG | + | chr4_3:29242020-29242039 | Msa0637540:intron | 35.0% | |
| GCAGAAAAAACAGAGAACAA+GGG | + | chr4_3:29242086-29242105 | Msa0637540:intron | 35.0% | |
| AAAACAGAGAACAAGGGTAA+AGG | + | chr4_3:29242092-29242111 | Msa0637540:five_prime_UTR | 35.0% | |
| AAACAAGAGTAGTGTGAAGA+AGG | + | chr4_3:29242179-29242198 | Msa0637540:five_prime_UTR | 35.0% | |
| TGATTATAATAGCTTGGAGC+AGG | + | chr4_3:29242381-29242400 | Msa0637540:CDS | 35.0% | |
| AAAATGATTGCATGGCTGAT+GGG | + | chr4_3:29242521-29242540 | Msa0637540:intron | 35.0% | |
| ! | TTTAAAGCTTCCTCAGTGTT+TGG | - | chr4_3:29242833-29242852 | None:intergenic | 35.0% |
| !! | ACACTGAGGAAGCTTTAAAA+TGG | + | chr4_3:29242834-29242853 | Msa0637540:intron | 35.0% |
| AACTACAAATAATGAGGGAG+GGG | + | chr4_3:29242991-29243010 | Msa0637540:intron | 35.0% | |
| TCTCAAACATTAAACCATGC+AGG | - | chr4_3:29243032-29243051 | None:intergenic | 35.0% | |
| AATAATAGCAATCAGTCGAG+AGG | - | chr4_3:29243482-29243501 | None:intergenic | 35.0% | |
| TGTGCTTATTATGTGACTAC+TGG | + | chr4_3:29243710-29243729 | Msa0637540:intron | 35.0% | |
| ! | TAGATGGTTCTGCAAATGTT+TGG | + | chr4_3:29243881-29243900 | Msa0637540:intron | 35.0% |
| GAACTCATTGCTAAAGAAGA+TGG | + | chr4_3:29244024-29244043 | Msa0637540:CDS | 35.0% | |
| AGACATTTGTTTCATAGGGA+AGG | - | chr4_3:29244094-29244113 | None:intergenic | 35.0% | |
| GAAACAAATGTCTGTTTCCT+CGG | + | chr4_3:29244101-29244120 | Msa0637540:CDS | 35.0% | |
| AAACAAATGTCTGTTTCCTC+GGG | + | chr4_3:29244102-29244121 | Msa0637540:CDS | 35.0% | |
| ! | AGGGTTTTCCATTGTAGATA+TGG | + | chr4_3:29244146-29244165 | Msa0637540:CDS | 35.0% |
| GTGACTAACCATATCTACAA+TGG | - | chr4_3:29244157-29244176 | None:intergenic | 35.0% | |
| AAACCAAGTGCAACTTGAAT+AGG | - | chr4_3:29244260-29244279 | None:intergenic | 35.0% | |
| !! | AACCAATGCTATTTGTTGTC+AGG | + | chr4_3:29244307-29244326 | Msa0637540:intron | 35.0% |
| AACCTGACAACAAATAGCAT+TGG | - | chr4_3:29244312-29244331 | None:intergenic | 35.0% | |
| !! | AATGCTATTTGTTGTCAGGT+TGG | + | chr4_3:29244311-29244330 | Msa0637540:intron | 35.0% |
| CATACAATTGGGATAAGGAA+AGG | - | chr4_3:29244417-29244436 | None:intergenic | 35.0% | |
| TGCCTTATATTTACACAACC+AGG | + | chr4_3:29244485-29244504 | Msa0637540:intron | 35.0% | |
| !!! | GCTTAGCTGGTTTATTTTAC+TGG | + | chr4_3:29244685-29244704 | Msa0637540:intron | 35.0% |
| !! | TGACAGAAGATTTTGGTAGT+TGG | + | chr4_3:29244719-29244738 | Msa0637540:intron | 35.0% |
| AAAAAATCTAAAGAGCCGAG+CGG | + | chr4_3:29244966-29244985 | Msa0637540:intron | 35.0% | |
| ! | ACACTCTTAGTGTTGAGAAA+TGG | + | chr4_3:29244999-29245018 | Msa0637540:intron | 35.0% |
| !!! | CTTTTTCAGCATGCATGTCT+AGG | + | chr4_3:29237375-29237394 | Msa0637540:five_prime_UTR | 40.0% |
| TTCCTCTTTGATCGATTGAG+AGG | + | chr4_3:29237480-29237499 | Msa0637540:intron | 40.0% | |
| ATCCTCTCAATCGATCAAAG+AGG | - | chr4_3:29237485-29237504 | None:intergenic | 40.0% | |
| CTGTGTTTCGATGGTGATTA+GGG | + | chr4_3:29237535-29237554 | Msa0637540:intron | 40.0% | |
| ! | ATTTTCACGACAGGATCTGT+TGG | + | chr4_3:29237682-29237701 | Msa0637540:intron | 40.0% |
| CTAGGGTAGTACATGCATAT+TGG | - | chr4_3:29237997-29238016 | None:intergenic | 40.0% | |
| CTATATTAGGGCTCAGATCT+AGG | - | chr4_3:29238015-29238034 | None:intergenic | 40.0% | |
| GACACTTGCACATAAAAAGG+AGG | + | chr4_3:29238034-29238053 | Msa0637540:intron | 40.0% | |
| TAGACTCATCTAGATGCATG+CGG | + | chr4_3:29238421-29238440 | Msa0637540:intron | 40.0% | |
| !! | CGATGTTTTTGTTGCATCGA+AGG | - | chr4_3:29238471-29238490 | None:intergenic | 40.0% |
| GTTCATGCATTCATGACTGA+TGG | - | chr4_3:29238525-29238544 | None:intergenic | 40.0% | |
| !! | ATTGGTGATGTTGAGGTGAT+TGG | - | chr4_3:29238583-29238602 | None:intergenic | 40.0% |
| !! | TTTTTGGAGACGAACTTGGT+AGG | - | chr4_3:29238905-29238924 | None:intergenic | 40.0% |
| !! | GTGATTTTTGGAGACGAACT+TGG | - | chr4_3:29238909-29238928 | None:intergenic | 40.0% |
| CCAGATCAAAACAGAAACGA+GGG | + | chr4_3:29239379-29239398 | Msa0637540:intron | 40.0% | |
| ATAGCGAAAATGCTCAGAGA+CGG | - | chr4_3:29239436-29239455 | None:intergenic | 40.0% | |
| CGAGTTTCTTCAGCAGTTTA+CGG | + | chr4_3:29239517-29239536 | Msa0637540:intron | 40.0% | |
| GAGTTTCTTCAGCAGTTTAC+GGG | + | chr4_3:29239518-29239537 | Msa0637540:intron | 40.0% | |
| !!! | TGGGGATTTTTGGGTGAAAA+TGG | - | chr4_3:29239551-29239570 | None:intergenic | 40.0% |
| GGTGAATTGGGGATTTGAAA+TGG | - | chr4_3:29239571-29239590 | None:intergenic | 40.0% | |
| !! | TTAGAGATTCTTGGTGCTAG+AGG | - | chr4_3:29240071-29240090 | None:intergenic | 40.0% |
| ! | AAGCTTGGGTTAGAGATTCT+TGG | - | chr4_3:29240080-29240099 | None:intergenic | 40.0% |
| CTAGGAGCTAAATTGAAGCT+TGG | - | chr4_3:29240095-29240114 | None:intergenic | 40.0% | |
| CTTAACCCACAACACCTTAA+TGG | + | chr4_3:29240277-29240296 | Msa0637540:intron | 40.0% | |
| ! | GGTTGGAATAGAAATGGGTT+AGG | - | chr4_3:29240304-29240323 | None:intergenic | 40.0% |
| !!! | TTTTGGACTTAGGGGCATTT+TGG | - | chr4_3:29240495-29240514 | None:intergenic | 40.0% |
| !!! | CCTCTGTGTGTATTTTTGGT+TGG | - | chr4_3:29240556-29240575 | None:intergenic | 40.0% |
| CCAACCAAAAATACACACAG+AGG | + | chr4_3:29240553-29240572 | Msa0637540:intron | 40.0% | |
| TGATATTCCAGGAGGTGATT+TGG | + | chr4_3:29240708-29240727 | Msa0637540:intron | 40.0% | |
| TATAATCAACCGGGCTAACA+GGG | + | chr4_3:29240901-29240920 | Msa0637540:intron | 40.0% | |
| ! | CTCTAGAGAGCTTCATCAAA+AGG | - | chr4_3:29241159-29241178 | None:intergenic | 40.0% |
| ! | TTTGATGAAGCTCTCTAGAG+CGG | + | chr4_3:29241159-29241178 | Msa0637540:intron | 40.0% |
| TTACCGTCAAATCGCAACAT+TGG | - | chr4_3:29241247-29241266 | None:intergenic | 40.0% | |
| CACCAATCAATATGAAGAGC+AGG | - | chr4_3:29241289-29241308 | None:intergenic | 40.0% | |
| ! | TATTGATTGGTGACCTGTGA+TGG | + | chr4_3:29241297-29241316 | Msa0637540:intron | 40.0% |
| !!! | AGGGTTTGTTTTGGTGATTC+AGG | + | chr4_3:29241566-29241585 | Msa0637540:intron | 40.0% |
| ATCTACTGCCACTAATAGGA+GGG | - | chr4_3:29241629-29241648 | None:intergenic | 40.0% | |
| AATCTACTGCCACTAATAGG+AGG | - | chr4_3:29241630-29241649 | None:intergenic | 40.0% | |
| GTATACTATGGAGCATATGC+AGG | - | chr4_3:29241743-29241762 | None:intergenic | 40.0% | |
| ACCATATGGAACAGGAATAC+AGG | + | chr4_3:29241805-29241824 | Msa0637540:intron | 40.0% | |
| TCCTGTATTCCTGTTCCATA+TGG | - | chr4_3:29241809-29241828 | None:intergenic | 40.0% | |
| TATGGAACAGGAATACAGGA+TGG | + | chr4_3:29241809-29241828 | Msa0637540:intron | 40.0% | |
| GGAGGTTAATATCAGCCATA+TGG | - | chr4_3:29242038-29242057 | None:intergenic | 40.0% | |
| GGCAGAAAAAACAGAGAACA+AGG | + | chr4_3:29242085-29242104 | Msa0637540:intron | 40.0% | |
| GAAAATGATTGCATGGCTGA+TGG | + | chr4_3:29242520-29242539 | Msa0637540:intron | 40.0% | |
| TAATGCGTCTGCTCTTTGTT+GGG | + | chr4_3:29242598-29242617 | Msa0637540:intron | 40.0% | |
| TGGTTGTATAAAGCTTCCGA+AGG | + | chr4_3:29242854-29242873 | Msa0637540:intron | 40.0% | |
| TTGTATAAAGCTTCCGAAGG+TGG | + | chr4_3:29242857-29242876 | Msa0637540:intron | 40.0% | |
| AGTCTTGCTCCATAGCATTT+GGG | - | chr4_3:29243367-29243386 | None:intergenic | 40.0% | |
| ! | TAGTCTTGCTCCATAGCATT+TGG | - | chr4_3:29243368-29243387 | None:intergenic | 40.0% |
| !! | GAGCAAGACTACTTTTGAAG+TGG | + | chr4_3:29243377-29243396 | Msa0637540:intron | 40.0% |
| GTAACTCAACACTTTGCTCA+AGG | - | chr4_3:29243667-29243686 | None:intergenic | 40.0% | |
| !!! | ATCTGTTTTTCAAGGCATCG+TGG | + | chr4_3:29243858-29243877 | Msa0637540:intron | 40.0% |
| CCACTTGATTAAAATTCCCG+AGG | - | chr4_3:29244121-29244140 | None:intergenic | 40.0% | |
| !! | CCTCGGGAATTTTAATCAAG+TGG | + | chr4_3:29244118-29244137 | Msa0637540:CDS | 40.0% |
| !! | TGTCCTATTCAAGTTGCACT+TGG | + | chr4_3:29244254-29244273 | Msa0637540:intron | 40.0% |
| TTGCTTTCAGAGGGGAATAT+TGG | - | chr4_3:29244461-29244480 | None:intergenic | 40.0% | |
| TAATACCTGTCTTGCTTAGC+TGG | + | chr4_3:29244672-29244691 | Msa0637540:intron | 40.0% | |
| ATAAACCAGCTAAGCAAGAC+AGG | - | chr4_3:29244680-29244699 | None:intergenic | 40.0% | |
| GTACAAGATGTGCTAAAGGT+GGG | - | chr4_3:29244785-29244804 | None:intergenic | 40.0% | |
| AGTACAAGATGTGCTAAAGG+TGG | - | chr4_3:29244786-29244805 | None:intergenic | 40.0% | |
| !!! | TGATTTGATATTTTGGGGCG+CGG | - | chr4_3:29245043-29245062 | None:intergenic | 40.0% |
| GTGGAGATTAGTGTGTTCGA+CGG | - | chr4_3:29237345-29237364 | None:intergenic | 45.0% | |
| CCTAATCACCATCGAAACAC+AGG | - | chr4_3:29237537-29237556 | None:intergenic | 45.0% | |
| CCTGTGTTTCGATGGTGATT+AGG | + | chr4_3:29237534-29237553 | Msa0637540:intron | 45.0% | |
| !! | CGATTCAGAGAGTCTTGTTG+AGG | - | chr4_3:29237587-29237606 | None:intergenic | 45.0% |
| !! | GCAATAATGGATACAGGCTC+AGG | + | chr4_3:29237719-29237738 | Msa0637540:intron | 45.0% |
| TTGTGTGCTTGATGTTGCAG+AGG | - | chr4_3:29238069-29238088 | None:intergenic | 45.0% | |
| GATGTAATGCTAACCCTCAG+TGG | - | chr4_3:29238145-29238164 | None:intergenic | 45.0% | |
| CATGCATTCATGACTGATGG+TGG | - | chr4_3:29238522-29238541 | None:intergenic | 45.0% | |
| GTCACATATACGTGCAGTAG+AGG | + | chr4_3:29239005-29239024 | Msa0637540:intron | 45.0% | |
| GCCAGATCAAAACAGAAACG+AGG | + | chr4_3:29239378-29239397 | Msa0637540:intron | 45.0% | |
| !!! | CCCTCGTTTCTGTTTTGATC+TGG | - | chr4_3:29239382-29239401 | None:intergenic | 45.0% |
| TCGCTAATAGCGAAGTTGTC+TGG | - | chr4_3:29239489-29239508 | None:intergenic | 45.0% | |
| GAGGAGATTTGTGGTTGTGT+TGG | - | chr4_3:29239718-29239737 | None:intergenic | 45.0% | |
| !! | TTCTTGGTGCTAGAGGTAAG+AGG | - | chr4_3:29240064-29240083 | None:intergenic | 45.0% |
| GAACAAGAGAAAGAGGTTGG+AGG | - | chr4_3:29240144-29240163 | None:intergenic | 45.0% | |
| TGGGTTAAGCCCAGTTACAT+AGG | - | chr4_3:29240266-29240285 | None:intergenic | 45.0% | |
| !! | TAGGCCCATTAAGGTGTTGT+GGG | - | chr4_3:29240285-29240304 | None:intergenic | 45.0% |
| !! | TTAGGCCCATTAAGGTGTTG+TGG | - | chr4_3:29240286-29240305 | None:intergenic | 45.0% |
| !! | GAAATGGGTTAGGCCCATTA+AGG | - | chr4_3:29240294-29240313 | None:intergenic | 45.0% |
| TAACACTAACGGTCACCTAC+CGG | + | chr4_3:29240357-29240376 | Msa0637540:intron | 45.0% | |
| !! | GGCTCTGAAACGATAGTTGT+GGG | - | chr4_3:29240764-29240783 | None:intergenic | 45.0% |
| GTATAATCAACCGGGCTAAC+AGG | + | chr4_3:29240900-29240919 | Msa0637540:intron | 45.0% | |
| ATACTCATACCCTGTTAGCC+CGG | - | chr4_3:29240913-29240932 | None:intergenic | 45.0% | |
| AATTACCACGTGATGCAGGA+GGG | - | chr4_3:29241006-29241025 | None:intergenic | 45.0% | |
| AAATTACCACGTGATGCAGG+AGG | - | chr4_3:29241007-29241026 | None:intergenic | 45.0% | |
| TTGGCAGGTAATGTCATTGG+AGG | + | chr4_3:29241082-29241101 | Msa0637540:intron | 45.0% | |
| TGAAAATATGACGGCCATGG+CGG | + | chr4_3:29241205-29241224 | Msa0637540:intron | 45.0% | |
| ! | ATGGCGGAAAATGTGTCTCA+CGG | + | chr4_3:29241221-29241240 | Msa0637540:intron | 45.0% |
| !! | GGTGATTCAGGTTTGTTGTC+TGG | + | chr4_3:29241578-29241597 | Msa0637540:intron | 45.0% |
| ACTGAACACCCTCCTATTAG+TGG | + | chr4_3:29241618-29241637 | Msa0637540:intron | 45.0% | |
| !! | AGGAATAGCAGAGGTGTTAG+AGG | - | chr4_3:29241838-29241857 | None:intergenic | 45.0% |
| ! | AGGCATATAGGCCAGTTTTC+TGG | + | chr4_3:29241886-29241905 | Msa0637540:intron | 45.0% |
| !!! | CCAGTTTTCTGGTTATGCGT+GGG | + | chr4_3:29241897-29241916 | Msa0637540:intron | 45.0% |
| ! | TTATGCGTGGGCTGAATATG+AGG | + | chr4_3:29241909-29241928 | Msa0637540:intron | 45.0% |
| AGAGAACAAGGGTAAAGGAG+AGG | + | chr4_3:29242097-29242116 | Msa0637540:five_prime_UTR | 45.0% | |
| GTAATGCGTCTGCTCTTTGT+TGG | + | chr4_3:29242597-29242616 | Msa0637540:intron | 45.0% | |
| AAAGCTTCCTCAGTGTTTGG+AGG | - | chr4_3:29242830-29242849 | None:intergenic | 45.0% | |
| TTCCGAAGGTGGTAATATCC+TGG | + | chr4_3:29242868-29242887 | Msa0637540:intron | 45.0% | |
| AGCCAGGATATTACCACCTT+CGG | - | chr4_3:29242873-29242892 | None:intergenic | 45.0% | |
| ! | GAGAAAATTGGTACTGAGCC+AGG | - | chr4_3:29242889-29242908 | None:intergenic | 45.0% |
| TCTCTATGTCTTCATCGAGC+TGG | + | chr4_3:29242905-29242924 | Msa0637540:intron | 45.0% | |
| TATGTCTTCATCGAGCTGGT+GGG | + | chr4_3:29242909-29242928 | Msa0637540:intron | 45.0% | |
| TAAAAGCTGGGAAACCTGCA+TGG | + | chr4_3:29243015-29243034 | Msa0637540:intron | 45.0% | |
| !! | TTTCAAGGCATCGTGGTAGA+TGG | + | chr4_3:29243865-29243884 | Msa0637540:intron | 45.0% |
| ! | GCTTCTGTCATGGGAAGTAT+TGG | - | chr4_3:29244052-29244071 | None:intergenic | 45.0% |
| AGATGTTGCAGCATGTTTGC+AGG | + | chr4_3:29244337-29244356 | Msa0637540:CDS | 45.0% | |
| !! | CAGGAAGCATTTGCACGAAA+TGG | + | chr4_3:29244356-29244375 | Msa0637540:CDS | 45.0% |
| AGGAAAGGAATTCCTGACCA+AGG | - | chr4_3:29244402-29244421 | None:intergenic | 45.0% | |
| ! | AGGCAAGCATTGCTTTCAGA+GGG | - | chr4_3:29244470-29244489 | None:intergenic | 45.0% |
| ! | AAGGCAAGCATTGCTTTCAG+AGG | - | chr4_3:29244471-29244490 | None:intergenic | 45.0% |
| GAAATGGCGAGTTGCATGTT+CGG | + | chr4_3:29245015-29245034 | Msa0637540:intron | 45.0% | |
| !!! | GATTTGATATTTTGGGGCGC+GGG | - | chr4_3:29245042-29245061 | None:intergenic | 45.0% |
| TGAATCGCGTCCAACTGGTA+TGG | + | chr4_3:29237600-29237619 | Msa0637540:intron | 50.0% | |
| GAATCGCGTCCAACTGGTAT+GGG | + | chr4_3:29237601-29237620 | Msa0637540:intron | 50.0% | |
| TTCACGACAGGATCTGTTGG+AGG | + | chr4_3:29237685-29237704 | Msa0637540:intron | 50.0% | |
| TGCTTGATGTTGCAGAGGAG+CGG | - | chr4_3:29238064-29238083 | None:intergenic | 50.0% | |
| ACTCCATCTACCCGTCCATA+CGG | + | chr4_3:29238103-29238122 | Msa0637540:intron | 50.0% | |
| TTTCCGTATGGACGGGTAGA+TGG | - | chr4_3:29238109-29238128 | None:intergenic | 50.0% | |
| ATCTACCCGTCCATACGGAA+AGG | + | chr4_3:29238108-29238127 | Msa0637540:intron | 50.0% | |
| TTACCACCTGCCTTTCCGTA+TGG | - | chr4_3:29238121-29238140 | None:intergenic | 50.0% | |
| TGCGGTAGCATATCACCTCA+AGG | + | chr4_3:29238439-29238458 | Msa0637540:intron | 50.0% | |
| !! | GCATTCATGACTGATGGTGG+TGG | - | chr4_3:29238519-29238538 | None:intergenic | 50.0% |
| TCATGTCAAACCGGCGACAT+TGG | + | chr4_3:29239312-29239331 | Msa0637540:intron | 50.0% | |
| !! | AGTTGGCTTTCCAATGTCGC+CGG | - | chr4_3:29239325-29239344 | None:intergenic | 50.0% |
| CTTCGCTATTAGCGAGTTCC+TGG | + | chr4_3:29239494-29239513 | Msa0637540:intron | 50.0% | |
| AACTGCTGAAGAAACTCGCC+AGG | - | chr4_3:29239515-29239534 | None:intergenic | 50.0% | |
| GTGCTAGAGGTAAGAGGCTT+AGG | - | chr4_3:29240058-29240077 | None:intergenic | 50.0% | |
| TTGGAGGCTAGAGCTAGAAG+AGG | - | chr4_3:29240128-29240147 | None:intergenic | 50.0% | |
| !! | GGGCTCTGAAACGATAGTTG+TGG | - | chr4_3:29240765-29240784 | None:intergenic | 50.0% |
| TTGGCGCAATGCATGCTTGA+AGG | + | chr4_3:29241058-29241077 | Msa0637540:intron | 50.0% | |
| TGGCGCAATGCATGCTTGAA+GGG | + | chr4_3:29241059-29241078 | Msa0637540:intron | 50.0% | |
| GCAATGCATGCTTGAAGGGT+TGG | + | chr4_3:29241063-29241082 | Msa0637540:intron | 50.0% | |
| ! | GGGTTGGCAGGTAATGTCAT+TGG | + | chr4_3:29241079-29241098 | Msa0637540:intron | 50.0% |
| ! | GTGAGACACATTTTCCGCCA+TGG | - | chr4_3:29241222-29241241 | None:intergenic | 50.0% |
| CGGCCAATGTTGCGATTTGA+CGG | + | chr4_3:29241241-29241260 | Msa0637540:intron | 50.0% | |
| AGCATATGCAGGTTGCCATC+AGG | - | chr4_3:29241732-29241751 | None:intergenic | 50.0% | |
| !!! | GCCAGTTTTCTGGTTATGCG+TGG | + | chr4_3:29241896-29241915 | Msa0637540:intron | 50.0% |
| CCCACGCATAACCAGAAAAC+TGG | - | chr4_3:29241900-29241919 | None:intergenic | 50.0% | |
| GGAACTGTCTGCAAAGCTGT+TGG | + | chr4_3:29242294-29242313 | Msa0637540:intron | 50.0% | |
| ACTGTCTGCAAAGCTGTTGG+TGG | + | chr4_3:29242297-29242316 | Msa0637540:five_prime_UTR | 50.0% | |
| !! | TGCAAAGCTGTTGGTGGTGT+TGG | + | chr4_3:29242303-29242322 | Msa0637540:five_prime_UTR | 50.0% |
| GAGGCTCAACTGCATAGCAT+AGG | - | chr4_3:29242811-29242830 | None:intergenic | 50.0% | |
| AGTTGAGCCTCCAAACACTG+AGG | + | chr4_3:29242820-29242839 | Msa0637540:intron | 50.0% | |
| CTATGTCTTCATCGAGCTGG+TGG | + | chr4_3:29242908-29242927 | Msa0637540:intron | 50.0% | |
| ATGAGGGAGGGGTTAAAAGC+TGG | + | chr4_3:29243002-29243021 | Msa0637540:intron | 50.0% | |
| TGAGGGAGGGGTTAAAAGCT+GGG | + | chr4_3:29243003-29243022 | Msa0637540:intron | 50.0% | |
| TTGCTCAAGGCTGCTGAGTT+TGG | - | chr4_3:29243654-29243673 | None:intergenic | 50.0% | |
| TCCCATGACAGAAGCGAACT+TGG | + | chr4_3:29244057-29244076 | Msa0637540:CDS | 50.0% | |
| GCCAAGTTCGCTTCTGTCAT+GGG | - | chr4_3:29244061-29244080 | None:intergenic | 50.0% | |
| AGCCAAGTTCGCTTCTGTCA+TGG | - | chr4_3:29244062-29244081 | None:intergenic | 50.0% | |
| AGGCAGCTACATGCACATCT+AGG | - | chr4_3:29244382-29244401 | None:intergenic | 50.0% | |
| AGATGTGCATGTAGCTGCCT+TGG | + | chr4_3:29244382-29244401 | Msa0637540:CDS | 50.0% | |
| ! | GGCAAGCATTGCTTTCAGAG+GGG | - | chr4_3:29244469-29244488 | None:intergenic | 50.0% |
| GACGGCGACAACGAGATTGA+CGG | - | chr4_3:29237312-29237331 | None:intergenic | 55.0% | |
| CTCTCTGAATCGCGTCCAAC+TGG | + | chr4_3:29237595-29237614 | Msa0637540:five_prime_UTR | 55.0% | |
| ACCTGCCTTTCCGTATGGAC+GGG | - | chr4_3:29238116-29238135 | None:intergenic | 55.0% | |
| CACCTGCCTTTCCGTATGGA+CGG | - | chr4_3:29238117-29238136 | None:intergenic | 55.0% | |
| AGGCAGGTGGTAAACCACTG+AGG | + | chr4_3:29238128-29238147 | Msa0637540:intron | 55.0% | |
| GGCAGGTGGTAAACCACTGA+GGG | + | chr4_3:29238129-29238148 | Msa0637540:intron | 55.0% | |
| CATCGAAGGTGACGACCTTG+AGG | - | chr4_3:29238457-29238476 | None:intergenic | 55.0% | |
| ATGAACCCTCCTGCATCACG+TGG | + | chr4_3:29240998-29241017 | Msa0637540:intron | 55.0% | |
| ! | TGCATGCTTGAAGGGTTGGC+AGG | + | chr4_3:29241067-29241086 | Msa0637540:intron | 55.0% |
| GCATGGCTGATGGGAGTTCT+TGG | + | chr4_3:29242530-29242549 | Msa0637540:intron | 55.0% | |
| TGCATGTAGCTGCCTTGGTC+AGG | + | chr4_3:29244387-29244406 | Msa0637540:intron | 55.0% | |
| AGTGTGTGAGTTTCGCCGCT+CGG | - | chr4_3:29244984-29245003 | None:intergenic | 55.0% | |
| GACAACGAGATTGACGGCGG+CGG | - | chr4_3:29237306-29237325 | None:intergenic | 60.0% | |
| GGCGACAACGAGATTGACGG+CGG | - | chr4_3:29237309-29237328 | None:intergenic | 60.0% | |
| TTCGACGGCGAGATCGACGA+CGG | - | chr4_3:29237330-29237349 | None:intergenic | 60.0% | |
| GGACGGGTAGATGGAGTGCA+GGG | - | chr4_3:29238100-29238119 | None:intergenic | 60.0% | |
| TGGACGGGTAGATGGAGTGC+AGG | - | chr4_3:29238101-29238120 | None:intergenic | 60.0% | |
| ACCCGTCCATACGGAAAGGC+AGG | + | chr4_3:29238112-29238131 | Msa0637540:intron | 60.0% | |
| CGTCCATACGGAAAGGCAGG+TGG | + | chr4_3:29238115-29238134 | Msa0637540:intron | 60.0% | |
| ACGGCGGCGGTGAAGATCGC+AGG | - | chr4_3:29237293-29237312 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 29237243 | 29245327 | 29237243 | ID=Msa0637540;Name=Msa0637540 |
| chr4_3 | mRNA | 29237243 | 29245327 | 29237243 | ID=Msa0637540-mRNA-1;Parent=Msa0637540;Name=Msa0637540-mRNA-1;_AED=0.40;_eAED=0.40;_QI=343|0.33|0.57|0.85|0.33|0.57|7|0|110 |
| chr4_3 | exon | 29237243 | 29237396 | 29237243 | ID=Msa0637540-mRNA-1:exon:7187;Parent=Msa0637540-mRNA-1 |
| chr4_3 | exon | 29237572 | 29237616 | 29237572 | ID=Msa0637540-mRNA-1:exon:7188;Parent=Msa0637540-mRNA-1 |
| chr4_3 | exon | 29242090 | 29242200 | 29242090 | ID=Msa0637540-mRNA-1:exon:7189;Parent=Msa0637540-mRNA-1 |
| chr4_3 | exon | 29242295 | 29242402 | 29242295 | ID=Msa0637540-mRNA-1:exon:7190;Parent=Msa0637540-mRNA-1 |
| chr4_3 | exon | 29243991 | 29244167 | 29243991 | ID=Msa0637540-mRNA-1:exon:7191;Parent=Msa0637540-mRNA-1 |
| chr4_3 | exon | 29244329 | 29244403 | 29244329 | ID=Msa0637540-mRNA-1:exon:7192;Parent=Msa0637540-mRNA-1 |
| chr4_3 | exon | 29245325 | 29245327 | 29245325 | ID=Msa0637540-mRNA-1:exon:7193;Parent=Msa0637540-mRNA-1 |
| chr4_3 | five_prime_UTR | 29237243 | 29237396 | 29237243 | ID=Msa0637540-mRNA-1:five_prime_utr;Parent=Msa0637540-mRNA-1 |
| chr4_3 | five_prime_UTR | 29237572 | 29237616 | 29237572 | ID=Msa0637540-mRNA-1:five_prime_utr;Parent=Msa0637540-mRNA-1 |
| chr4_3 | five_prime_UTR | 29242090 | 29242200 | 29242090 | ID=Msa0637540-mRNA-1:five_prime_utr;Parent=Msa0637540-mRNA-1 |
| chr4_3 | five_prime_UTR | 29242295 | 29242327 | 29242295 | ID=Msa0637540-mRNA-1:five_prime_utr;Parent=Msa0637540-mRNA-1 |
| chr4_3 | CDS | 29242328 | 29242402 | 29242328 | ID=Msa0637540-mRNA-1:cds;Parent=Msa0637540-mRNA-1 |
| chr4_3 | CDS | 29243991 | 29244167 | 29243991 | ID=Msa0637540-mRNA-1:cds;Parent=Msa0637540-mRNA-1 |
| chr4_3 | CDS | 29244329 | 29244403 | 29244329 | ID=Msa0637540-mRNA-1:cds;Parent=Msa0637540-mRNA-1 |
| chr4_3 | CDS | 29245325 | 29245327 | 29245325 | ID=Msa0637540-mRNA-1:cds;Parent=Msa0637540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
