Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326200 | PNY14955.1 | 91.954 | 87 | 7 | 0 | 2 | 88 | 41 | 127 | 2.25e-48 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326200 | sp|Q9SFU0|SC24A_ARATH | 76.471 | 85 | 20 | 0 | 2 | 86 | 604 | 688 | 6.49e-41 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0326200 | 0.803958 | 2.719084e-49 | -8.615850e-47 |
| Msa0078590 | Msa0326200 | 0.808466 | 3.054125e-50 | -8.615850e-47 |
| Msa0112750 | Msa0326200 | 0.813466 | 2.523695e-51 | -8.615850e-47 |
| Msa0122590 | Msa0326200 | 0.809764 | 1.610502e-50 | -8.615850e-47 |
| Msa0142220 | Msa0326200 | 0.807448 | 5.030731e-50 | -8.615850e-47 |
| Msa0145250 | Msa0326200 | 0.806625 | 7.512542e-50 | -8.615850e-47 |
| Msa0153910 | Msa0326200 | 0.863398 | 2.562214e-64 | -8.615850e-47 |
| Msa0157290 | Msa0326200 | 0.804052 | 2.598842e-49 | -8.615850e-47 |
| Msa0199240 | Msa0326200 | 0.801390 | 9.210737e-49 | -8.615850e-47 |
| Msa0203500 | Msa0326200 | 0.825859 | 3.725622e-54 | -8.615850e-47 |
| Msa0220580 | Msa0326200 | 0.805044 | 1.614517e-49 | -8.615850e-47 |
| Msa0231000 | Msa0326200 | 0.802409 | 5.686481e-49 | -8.615850e-47 |
| Msa0233300 | Msa0326200 | 0.834212 | 3.415253e-56 | -8.615850e-47 |
| Msa0256440 | Msa0326200 | 0.802917 | 4.467512e-49 | -8.615850e-47 |
| Msa0262510 | Msa0326200 | 0.802413 | 5.678191e-49 | -8.615850e-47 |
| Msa0309020 | Msa0326200 | 0.802831 | 4.653881e-49 | -8.615850e-47 |
| Msa0311630 | Msa0326200 | 0.808051 | 3.744196e-50 | -8.615850e-47 |
| Msa0324150 | Msa0326200 | 0.825116 | 5.585041e-54 | -8.615850e-47 |
| Msa0326200 | Msa0353190 | 0.962032 | 2.139549e-120 | -8.615850e-47 |
| Msa0326200 | Msa0353690 | 0.941812 | 2.163119e-101 | -8.615850e-47 |
| Msa0326200 | Msa0355220 | 0.809703 | 1.659477e-50 | -8.615850e-47 |
| Msa0326200 | Msa0360900 | 0.870967 | 9.773050e-67 | -8.615850e-47 |
| Msa0326200 | Msa0363300 | 0.805298 | 1.428103e-49 | -8.615850e-47 |
| Msa0326200 | Msa0366580 | 0.803446 | 3.472124e-49 | -8.615850e-47 |
| Msa0326200 | Msa0394970 | 0.805774 | 1.134939e-49 | -8.615850e-47 |
| Msa0326200 | Msa0399300 | 0.816164 | 6.367663e-52 | -8.615850e-47 |
| Msa0326200 | Msa0402290 | 0.817796 | 2.738352e-52 | -8.615850e-47 |
| Msa0326200 | Msa0406120 | 0.824980 | 6.014471e-54 | -8.615850e-47 |
| Msa0326200 | Msa0414230 | 0.802515 | 5.408743e-49 | -8.615850e-47 |
| Msa0326200 | Msa0417100 | 0.811806 | 5.824228e-51 | -8.615850e-47 |
| Msa0326200 | Msa0431500 | 0.879727 | 9.837207e-70 | -8.615850e-47 |
| Msa0326200 | Msa0431690 | 0.825049 | 5.793256e-54 | -8.615850e-47 |
| Msa0326200 | Msa0432290 | 0.823363 | 1.442128e-53 | -8.615850e-47 |
| Msa0326200 | Msa0432300 | 0.801269 | 9.751394e-49 | -8.615850e-47 |
| Msa0326200 | Msa0437990 | 0.838264 | 3.187761e-57 | -8.615850e-47 |
| Msa0326200 | Msa0452620 | 0.823582 | 1.281744e-53 | -8.615850e-47 |
| Msa0326200 | Msa0456200 | 0.978475 | 6.661342e-146 | -8.615850e-47 |
| Msa0326200 | Msa0458090 | 0.802214 | 6.240065e-49 | -8.615850e-47 |
| Msa0326200 | Msa0482620 | 0.821554 | 3.796131e-53 | -8.615850e-47 |
| Msa0326200 | Msa0483650 | 0.818661 | 1.744542e-52 | -8.615850e-47 |
| Msa0326200 | Msa0484780 | 0.815959 | 7.074984e-52 | -8.615850e-47 |
| Msa0326200 | Msa0497880 | 0.800587 | 1.343888e-48 | -8.615850e-47 |
| Msa0326200 | Msa0502270 | 0.804954 | 1.685858e-49 | -8.615850e-47 |
| Msa0326200 | Msa0512890 | 0.807095 | 5.976409e-50 | -8.615850e-47 |
| Msa0326200 | Msa0512900 | 0.819082 | 1.399998e-52 | -8.615850e-47 |
| Msa0326200 | Msa0532350 | 0.815873 | 7.396631e-52 | -8.615850e-47 |
| Msa0326200 | Msa0533290 | 0.800536 | 1.376254e-48 | -8.615850e-47 |
| Msa0326200 | Msa0533430 | 0.815449 | 9.191889e-52 | -8.615850e-47 |
| Msa0326200 | Msa0558640 | 0.812381 | 4.362247e-51 | -8.615850e-47 |
| Msa0326200 | Msa0562510 | 0.800063 | 1.718157e-48 | -8.615850e-47 |
| Msa0326200 | Msa0627410 | 0.971429 | 3.775305e-133 | -8.615850e-47 |
| Msa0326200 | Msa0636170 | 0.800167 | 1.636246e-48 | -8.615850e-47 |
| Msa0326200 | Msa0637540 | 0.805653 | 1.203097e-49 | -8.615850e-47 |
| Msa0326200 | Msa0650630 | 0.800473 | 1.417986e-48 | -8.615850e-47 |
| Msa0326200 | Msa0657970 | 0.846640 | 1.913377e-59 | -8.615850e-47 |
| Msa0326200 | Msa0661870 | 0.839921 | 1.186792e-57 | -8.615850e-47 |
| Msa0326200 | Msa0669870 | 0.800112 | 1.678993e-48 | -8.615850e-47 |
| Msa0326200 | Msa0678930 | 0.837450 | 5.160134e-57 | -8.615850e-47 |
| Msa0326200 | Msa0682360 | 0.810403 | 1.172766e-50 | -8.615850e-47 |
| Msa0326200 | Msa0691880 | 0.868143 | 8.127345e-66 | -8.615850e-47 |
| Msa0326200 | Msa0696640 | 0.801717 | 7.894536e-49 | -8.615850e-47 |
| Msa0326200 | Msa0697060 | 0.817443 | 3.289170e-52 | -8.615850e-47 |
| Msa0326200 | Msa0726140 | 0.811946 | 5.428471e-51 | -8.615850e-47 |
| Msa0326200 | Msa0741570 | 0.844260 | 8.441653e-59 | -8.615850e-47 |
| Msa0326200 | Msa0745060 | 0.818726 | 1.686668e-52 | -8.615850e-47 |
| Msa0326200 | Msa0762360 | 0.822913 | 1.836269e-53 | -8.615850e-47 |
| Msa0326200 | Msa0766630 | 0.828188 | 1.032754e-54 | -8.615850e-47 |
| Msa0326200 | Msa0789250 | 0.807603 | 4.663148e-50 | -8.615850e-47 |
| Msa0326200 | Msa0793640 | 0.802161 | 6.398804e-49 | -8.615850e-47 |
| Msa0326200 | Msa0811080 | 0.800161 | 1.641096e-48 | -8.615850e-47 |
| Msa0326200 | Msa0815320 | 0.811073 | 8.399207e-51 | -8.615850e-47 |
| Msa0326200 | Msa0822650 | 0.834516 | 2.865470e-56 | -8.615850e-47 |
| Msa0326200 | Msa0825860 | 0.814908 | 1.212495e-51 | -8.615850e-47 |
| Msa0326200 | Msa0831970 | 0.806325 | 8.688924e-50 | -8.615850e-47 |
| Msa0326200 | Msa0840740 | 0.810044 | 1.401898e-50 | -8.615850e-47 |
| Msa0326200 | Msa0846350 | 0.802225 | 6.204846e-49 | -8.615850e-47 |
| Msa0326200 | Msa0874380 | 0.806051 | 9.926535e-50 | -8.615850e-47 |
| Msa0326200 | Msa0880140 | 0.801449 | 8.959302e-49 | -8.615850e-47 |
| Msa0326200 | Msa0884150 | 0.804884 | 1.743691e-49 | -8.615850e-47 |
| Msa0326200 | Msa0885280 | 0.863077 | 3.220073e-64 | -8.615850e-47 |
| Msa0326200 | Msa0885290 | 0.859063 | 5.360186e-63 | -8.615850e-47 |
| Msa0326200 | Msa0886750 | 0.812110 | 4.999401e-51 | -8.615850e-47 |
| Msa0326200 | Msa0887990 | 0.877681 | 5.171557e-69 | -8.615850e-47 |
| Msa0326200 | Msa0897880 | 0.821471 | 3.967150e-53 | -8.615850e-47 |
| Msa0326200 | Msa0907070 | 0.818787 | 1.633295e-52 | -8.615850e-47 |
| Msa0326200 | Msa0909120 | 0.834385 | 3.090432e-56 | -8.615850e-47 |
| Msa0326200 | Msa0909140 | 0.817254 | 3.627796e-52 | -8.615850e-47 |
| Msa0326200 | Msa0917810 | 0.812027 | 5.212303e-51 | -8.615850e-47 |
| Msa0326200 | Msa0922720 | 0.820568 | 6.404226e-53 | -8.615850e-47 |
| Msa0326200 | Msa0935910 | 0.815676 | 8.184778e-52 | -8.615850e-47 |
| Msa0326200 | Msa0954910 | 0.821370 | 4.185583e-53 | -8.615850e-47 |
| Msa0326200 | Msa0965750 | 0.845978 | 2.898861e-59 | -8.615850e-47 |
| Msa0326200 | Msa0983090 | 0.808357 | 3.223421e-50 | -8.615850e-47 |
| Msa0326200 | Msa1016280 | 0.808283 | 3.342441e-50 | -8.615850e-47 |
| Msa0326200 | Msa1024240 | 0.836146 | 1.110248e-56 | -8.615850e-47 |
| Msa0326200 | Msa1025370 | 0.800830 | 1.199010e-48 | -8.615850e-47 |
| Msa0326200 | Msa1032850 | 0.814800 | 1.281030e-51 | -8.615850e-47 |
| Msa0326200 | Msa1077870 | 0.819348 | 1.217505e-52 | -8.615850e-47 |
| Msa0326200 | Msa1079180 | 0.824930 | 6.180946e-54 | -8.615850e-47 |
| Msa0326200 | Msa1082500 | 0.824134 | 9.512505e-54 | -8.615850e-47 |
| Msa0326200 | Msa1084240 | 0.817339 | 3.471037e-52 | -8.615850e-47 |
| Msa0326200 | Msa1100320 | 0.804098 | 2.542698e-49 | -8.615850e-47 |
| Msa0326200 | Msa1100980 | 0.816271 | 6.027235e-52 | -8.615850e-47 |
| Msa0326200 | Msa1135740 | 0.809134 | 2.198885e-50 | -8.615850e-47 |
| Msa0326200 | Msa1136090 | 0.846399 | 2.226300e-59 | -8.615850e-47 |
| Msa0326200 | Msa1148020 | 0.822519 | 2.268884e-53 | -8.615850e-47 |
| Msa0326200 | Msa1160670 | 0.846740 | 1.796256e-59 | -8.615850e-47 |
| Msa0326200 | Msa1160690 | 0.801114 | 1.049087e-48 | -8.615850e-47 |
| Msa0326200 | Msa1172670 | 0.805168 | 1.520753e-49 | -8.615850e-47 |
| Msa0326200 | Msa1173920 | 0.816274 | 6.016935e-52 | -8.615850e-47 |
| Msa0326200 | Msa1178720 | 0.915362 | 6.445941e-85 | -8.615850e-47 |
| Msa0326200 | Msa1187940 | 0.844643 | 6.656646e-59 | -8.615850e-47 |
| Msa0326200 | Msa1187950 | 0.817803 | 2.728052e-52 | -8.615850e-47 |
| Msa0326200 | Msa1253000 | 0.811221 | 7.801888e-51 | -8.615850e-47 |
| Msa0326200 | Msa1260100 | 0.820654 | 6.119061e-53 | -8.615850e-47 |
| Msa0326200 | Msa1269670 | 0.803584 | 3.251762e-49 | -8.615850e-47 |
| Msa0326200 | Msa1283860 | 0.814355 | 1.606841e-51 | -8.615850e-47 |
| Msa0326200 | Msa1288000 | 0.802760 | 4.815643e-49 | -8.615850e-47 |
| Msa0326200 | Msa1297210 | 0.851110 | 1.098532e-60 | -8.615850e-47 |
| Msa0326200 | Msa1307980 | 0.806132 | 9.544352e-50 | -8.615850e-47 |
| Msa0326200 | Msa1314340 | 0.801549 | 8.543933e-49 | -8.615850e-47 |
| Msa0326200 | Msa1324780 | 0.835289 | 1.830190e-56 | -8.615850e-47 |
| Msa0326200 | Msa1397610 | 0.851795 | 7.029853e-61 | -8.615850e-47 |
| Msa0326200 | Msa1397860 | 0.820516 | 6.581284e-53 | -8.615850e-47 |
| Msa0326200 | Msa1411020 | 0.831398 | 1.707702e-55 | -8.615850e-47 |
| Msa0326200 | Msa1420140 | 0.819544 | 1.098413e-52 | -8.615850e-47 |
| Msa0326200 | Msa1420490 | 0.816862 | 4.444216e-52 | -8.615850e-47 |
| Msa0326200 | Msa1423390 | 0.818380 | 2.020769e-52 | -8.615850e-47 |
| Msa0326200 | Msa1423990 | 0.806812 | 6.859960e-50 | -8.615850e-47 |
| Msa0326200 | Msa1424290 | 0.832822 | 7.592970e-56 | -8.615850e-47 |
| Msa0326200 | Msa1425100 | 0.809373 | 1.953790e-50 | -8.615850e-47 |
| Msa0326200 | Msa1434350 | 0.832649 | 8.380841e-56 | -8.615850e-47 |
| Msa0326200 | Msa1438250 | 0.843537 | 1.318349e-58 | -8.615850e-47 |
| Msa0326200 | Msa1439320 | 0.830807 | 2.384986e-55 | -8.615850e-47 |
| Msa0326200 | Msa1440370 | 0.818906 | 1.534562e-52 | -8.615850e-47 |
| Msa0326200 | Msa1440810 | 0.819265 | 1.271825e-52 | -8.615850e-47 |
| Msa0326200 | Msa1451620 | -0.802296 | 6.000238e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326200 | MtrunA17_Chr7g0271481 | 92.941 | 85 | 6 | 0 | 2 | 86 | 586 | 670 | 2.19e-51 | 172 |
| Msa0326200 | MtrunA17_Chr1g0210851 | 36.585 | 82 | 52 | 0 | 5 | 86 | 686 | 767 | 1.22e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326200 | AT3G07100.1 | 76.471 | 85 | 20 | 0 | 2 | 86 | 604 | 688 | 6.60e-42 | 145 |
| Msa0326200 | AT4G32640.2 | 34.146 | 82 | 54 | 0 | 5 | 86 | 669 | 750 | 1.30e-11 | 59.7 |
| Msa0326200 | AT4G32640.1 | 34.146 | 82 | 54 | 0 | 5 | 86 | 669 | 750 | 1.30e-11 | 59.7 |
| Msa0326200 | AT3G44340.5 | 35.366 | 82 | 53 | 0 | 5 | 86 | 672 | 753 | 1.34e-11 | 59.7 |
| Msa0326200 | AT3G44340.2 | 35.366 | 82 | 53 | 0 | 5 | 86 | 672 | 753 | 1.34e-11 | 59.7 |
| Msa0326200 | AT3G44340.1 | 35.366 | 82 | 53 | 0 | 5 | 86 | 672 | 753 | 1.34e-11 | 59.7 |
| Msa0326200 | AT3G44340.4 | 35.366 | 82 | 53 | 0 | 5 | 86 | 672 | 753 | 1.34e-11 | 59.7 |
| Msa0326200 | AT3G44340.3 | 35.366 | 82 | 53 | 0 | 5 | 86 | 672 | 753 | 1.34e-11 | 59.7 |
Find 18 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCATAAAATGGATCTTC+AGG | 0.293277 | 2_4:-35448468 | None:intergenic |
| AGAAATTGAGTCATGAATTA+AGG | 0.308061 | 2_4:+35449033 | Msa0326200:CDS |
| CATACACATTTACTGAGATT+TGG | 0.310882 | 2_4:-35448515 | None:intergenic |
| GCAGCCATCTGCTCATAAAA+TGG | 0.311495 | 2_4:-35448477 | None:intergenic |
| TCCTGTCTGTGTAGGAACTC+TGG | 0.429146 | 2_4:+35448950 | Msa0326200:intron |
| TCTCCCCATGAGTAGCTGAT+TGG | 0.442822 | 2_4:-35449013 | None:intergenic |
| TGAGTAGCTGATTGGAAAGC+TGG | 0.469035 | 2_4:-35449005 | None:intergenic |
| GAGAGACTGCATGGGAAGCA+TGG | 0.524555 | 2_4:+35449069 | Msa0326200:CDS |
| GCTTTCCAATCAGCTACTCA+TGG | 0.528786 | 2_4:+35449008 | Msa0326200:CDS |
| TACACTGACATAGCCTCCTT+AGG | 0.536987 | 2_4:+35448552 | Msa0326200:CDS |
| CTTTCCAATCAGCTACTCAT+GGG | 0.542155 | 2_4:+35449009 | Msa0326200:CDS |
| GGAAAATAAAACACCTAAGG+AGG | 0.554451 | 2_4:-35448565 | None:intergenic |
| ACCTCACAAGAGAGACTGCA+TGG | 0.560035 | 2_4:+35449060 | Msa0326200:CDS |
| ACTCTGGCAAAGTACACTGC+TGG | 0.591069 | 2_4:+35448966 | Msa0326200:CDS |
| CCCATGCAGTCTCTCTTGTG+AGG | 0.598716 | 2_4:-35449061 | None:intergenic |
| TTTGGGACAGATAAAGAACA+TGG | 0.635621 | 2_4:+35448435 | Msa0326200:intron |
| TTTCCAATCAGCTACTCATG+GGG | 0.686768 | 2_4:+35449010 | Msa0326200:CDS |
| CCTCACAAGAGAGACTGCAT+GGG | 0.693489 | 2_4:+35449061 | Msa0326200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTAATTCAACAATTATTT+TGG | - | chr2_4:35447520-35447539 | None:intergenic | 15.0% |
| !!! | ATGAAGAAATTAATCATTTT+AGG | + | chr2_4:35447547-35447566 | Msa0326200:intron | 15.0% |
| !!! | TGAAGAAATTAATCATTTTA+GGG | + | chr2_4:35447548-35447567 | Msa0326200:intron | 15.0% |
| !!! | TTCTAATTCAACAATTATTT+TGG | - | chr2_4:35447520-35447539 | None:intergenic | 15.0% |
| !!! | ATGAAGAAATTAATCATTTT+AGG | + | chr2_4:35447547-35447566 | Msa0326200:intron | 15.0% |
| !!! | TGAAGAAATTAATCATTTTA+GGG | + | chr2_4:35447548-35447567 | Msa0326200:intron | 15.0% |
| !! | AGTTTATACAGTTTGTAAAT+AGG | - | chr2_4:35447073-35447092 | None:intergenic | 20.0% |
| !!! | GTATAAACTGTGTTTTTTTT+AGG | + | chr2_4:35447084-35447103 | Msa0326200:intron | 20.0% |
| !! | TTTATCTCAAATCTTGTATT+TGG | + | chr2_4:35447443-35447462 | Msa0326200:intron | 20.0% |
| !!! | CAAATCTTTTCATTAAGAAT+TGG | - | chr2_4:35447940-35447959 | None:intergenic | 20.0% |
| !! | ATTCTTAATGAAAAGATTTG+TGG | + | chr2_4:35447940-35447959 | Msa0326200:intron | 20.0% |
| !! | TTAAAGTAATTAGAAATCCA+TGG | + | chr2_4:35448060-35448079 | Msa0326200:intron | 20.0% |
| !!! | ATATTTTTGTTGTATTAGTG+TGG | + | chr2_4:35448226-35448245 | Msa0326200:intron | 20.0% |
| !! | TAACAGGTTTAAAAATAGAA+TGG | - | chr2_4:35448616-35448635 | None:intergenic | 20.0% |
| !! | AGTTTATACAGTTTGTAAAT+AGG | - | chr2_4:35447073-35447092 | None:intergenic | 20.0% |
| !!! | GTATAAACTGTGTTTTTTTT+AGG | + | chr2_4:35447084-35447103 | Msa0326200:intron | 20.0% |
| !! | TTTATCTCAAATCTTGTATT+TGG | + | chr2_4:35447443-35447462 | Msa0326200:intron | 20.0% |
| !!! | CAAATCTTTTCATTAAGAAT+TGG | - | chr2_4:35447940-35447959 | None:intergenic | 20.0% |
| !! | ATTCTTAATGAAAAGATTTG+TGG | + | chr2_4:35447940-35447959 | Msa0326200:intron | 20.0% |
| !! | TTAAAGTAATTAGAAATCCA+TGG | + | chr2_4:35448060-35448079 | Msa0326200:intron | 20.0% |
| !!! | ATATTTTTGTTGTATTAGTG+TGG | + | chr2_4:35448226-35448245 | Msa0326200:intron | 20.0% |
| !! | TAACAGGTTTAAAAATAGAA+TGG | - | chr2_4:35448616-35448635 | None:intergenic | 20.0% |
| !!! | TACTGATTTAGTGAGAATTT+TGG | + | chr2_4:35447576-35447595 | Msa0326200:intron | 25.0% |
| !!! | ACTGATTTAGTGAGAATTTT+GGG | + | chr2_4:35447577-35447596 | Msa0326200:intron | 25.0% |
| ! | ATTTGTCAGTAATTGCAAAT+GGG | + | chr2_4:35447733-35447752 | Msa0326200:intron | 25.0% |
| !!! | AAGTTAAGTCATGTTTTAGT+TGG | + | chr2_4:35447781-35447800 | Msa0326200:intron | 25.0% |
| !!! | GAAATTTTGGAAAAAATGTG+TGG | + | chr2_4:35447993-35448012 | Msa0326200:intron | 25.0% |
| ! | TTGACTTTAATAAGATGCTT+TGG | + | chr2_4:35448123-35448142 | Msa0326200:intron | 25.0% |
| ! | GTGATAAAATTCATATGCAA+TGG | - | chr2_4:35448281-35448300 | None:intergenic | 25.0% |
| ! | ATGTTCTGATATTTGTGTAA+TGG | + | chr2_4:35448327-35448346 | Msa0326200:intron | 25.0% |
| ! | AAGTTCAACACACAAAAATA+TGG | - | chr2_4:35448395-35448414 | None:intergenic | 25.0% |
| !!! | AGTGTATTAGTGTATTGATT+TGG | + | chr2_4:35448417-35448436 | Msa0326200:intron | 25.0% |
| !!! | GTGTATTAGTGTATTGATTT+GGG | + | chr2_4:35448418-35448437 | Msa0326200:intron | 25.0% |
| ! | ACGAAATACATAGAAATTGA+AGG | - | chr2_4:35448589-35448608 | None:intergenic | 25.0% |
| ! | ATCAATTAATCAAGAGTAAC+AGG | - | chr2_4:35448632-35448651 | None:intergenic | 25.0% |
| ! | AGAAATTGAGTCATGAATTA+AGG | + | chr2_4:35449033-35449052 | Msa0326200:CDS | 25.0% |
| !!! | TACTGATTTAGTGAGAATTT+TGG | + | chr2_4:35447576-35447595 | Msa0326200:intron | 25.0% |
| !!! | ACTGATTTAGTGAGAATTTT+GGG | + | chr2_4:35447577-35447596 | Msa0326200:intron | 25.0% |
| ! | ATTTGTCAGTAATTGCAAAT+GGG | + | chr2_4:35447733-35447752 | Msa0326200:intron | 25.0% |
| !!! | AAGTTAAGTCATGTTTTAGT+TGG | + | chr2_4:35447781-35447800 | Msa0326200:intron | 25.0% |
| !!! | GAAATTTTGGAAAAAATGTG+TGG | + | chr2_4:35447993-35448012 | Msa0326200:intron | 25.0% |
| ! | TTGACTTTAATAAGATGCTT+TGG | + | chr2_4:35448123-35448142 | Msa0326200:intron | 25.0% |
| ! | GTGATAAAATTCATATGCAA+TGG | - | chr2_4:35448281-35448300 | None:intergenic | 25.0% |
| ! | ATGTTCTGATATTTGTGTAA+TGG | + | chr2_4:35448327-35448346 | Msa0326200:intron | 25.0% |
| ! | AAGTTCAACACACAAAAATA+TGG | - | chr2_4:35448395-35448414 | None:intergenic | 25.0% |
| !!! | AGTGTATTAGTGTATTGATT+TGG | + | chr2_4:35448417-35448436 | Msa0326200:intron | 25.0% |
| !!! | GTGTATTAGTGTATTGATTT+GGG | + | chr2_4:35448418-35448437 | Msa0326200:intron | 25.0% |
| ! | ACGAAATACATAGAAATTGA+AGG | - | chr2_4:35448589-35448608 | None:intergenic | 25.0% |
| ! | ATCAATTAATCAAGAGTAAC+AGG | - | chr2_4:35448632-35448651 | None:intergenic | 25.0% |
| ! | AGAAATTGAGTCATGAATTA+AGG | + | chr2_4:35449033-35449052 | Msa0326200:CDS | 25.0% |
| ! | TCAAATCTTGTATTTGGTGA+AGG | + | chr2_4:35447449-35447468 | Msa0326200:intron | 30.0% |
| ! | ACTGTCTAATTGTTGCATTT+TGG | + | chr2_4:35447670-35447689 | Msa0326200:intron | 30.0% |
| CAACGACATAACATCTTAAT+CGG | - | chr2_4:35447703-35447722 | None:intergenic | 30.0% | |
| GATTTGTCAGTAATTGCAAA+TGG | + | chr2_4:35447732-35447751 | Msa0326200:intron | 30.0% | |
| TTTGTCAGTAATTGCAAATG+GGG | + | chr2_4:35447734-35447753 | Msa0326200:intron | 30.0% | |
| GTCACACTTATGTCAAAAAA+TGG | + | chr2_4:35447962-35447981 | Msa0326200:intron | 30.0% | |
| !! | AATGGACAGTGTTGAAATTT+TGG | + | chr2_4:35447980-35447999 | Msa0326200:intron | 30.0% |
| AAAAACTAGCATTTGTTCGT+TGG | + | chr2_4:35448203-35448222 | Msa0326200:intron | 30.0% | |
| !! | GATATTTGTGTAATGGATAG+AGG | + | chr2_4:35448334-35448353 | Msa0326200:intron | 30.0% |
| CATACACATTTACTGAGATT+TGG | - | chr2_4:35448518-35448537 | None:intergenic | 30.0% | |
| GAAGGAAAATAAAACACCTA+AGG | - | chr2_4:35448571-35448590 | None:intergenic | 30.0% | |
| ! | ATTTGATGATTCTTCAGTTG+TGG | + | chr2_4:35448654-35448673 | Msa0326200:intron | 30.0% |
| ! | ACTTGATGACATGAGTTTAT+GGG | + | chr2_4:35448692-35448711 | Msa0326200:intron | 30.0% |
| TAAACTGATACTCTAACTCA+TGG | + | chr2_4:35448735-35448754 | Msa0326200:intron | 30.0% | |
| AAATGCTGACAGAATTACAT+CGG | - | chr2_4:35448865-35448884 | None:intergenic | 30.0% | |
| ! | TCAAATCTTGTATTTGGTGA+AGG | + | chr2_4:35447449-35447468 | Msa0326200:intron | 30.0% |
| ! | ACTGTCTAATTGTTGCATTT+TGG | + | chr2_4:35447670-35447689 | Msa0326200:intron | 30.0% |
| CAACGACATAACATCTTAAT+CGG | - | chr2_4:35447703-35447722 | None:intergenic | 30.0% | |
| GATTTGTCAGTAATTGCAAA+TGG | + | chr2_4:35447732-35447751 | Msa0326200:intron | 30.0% | |
| TTTGTCAGTAATTGCAAATG+GGG | + | chr2_4:35447734-35447753 | Msa0326200:intron | 30.0% | |
| GTCACACTTATGTCAAAAAA+TGG | + | chr2_4:35447962-35447981 | Msa0326200:intron | 30.0% | |
| !! | AATGGACAGTGTTGAAATTT+TGG | + | chr2_4:35447980-35447999 | Msa0326200:intron | 30.0% |
| AAAAACTAGCATTTGTTCGT+TGG | + | chr2_4:35448203-35448222 | Msa0326200:intron | 30.0% | |
| !! | GATATTTGTGTAATGGATAG+AGG | + | chr2_4:35448334-35448353 | Msa0326200:intron | 30.0% |
| CATACACATTTACTGAGATT+TGG | - | chr2_4:35448518-35448537 | None:intergenic | 30.0% | |
| GAAGGAAAATAAAACACCTA+AGG | - | chr2_4:35448571-35448590 | None:intergenic | 30.0% | |
| ! | ATTTGATGATTCTTCAGTTG+TGG | + | chr2_4:35448654-35448673 | Msa0326200:intron | 30.0% |
| ! | ACTTGATGACATGAGTTTAT+GGG | + | chr2_4:35448692-35448711 | Msa0326200:intron | 30.0% |
| TAAACTGATACTCTAACTCA+TGG | + | chr2_4:35448735-35448754 | Msa0326200:intron | 30.0% | |
| AAATGCTGACAGAATTACAT+CGG | - | chr2_4:35448865-35448884 | None:intergenic | 30.0% | |
| ! | ACAAAGGGGTGTATAGAAAA+GGG | - | chr2_4:35447128-35447147 | None:intergenic | 35.0% |
| ! | TACAAAGGGGTGTATAGAAA+AGG | - | chr2_4:35447129-35447148 | None:intergenic | 35.0% |
| TTCGGTAGTTTCATGCAATA+AGG | + | chr2_4:35447173-35447192 | Msa0326200:intron | 35.0% | |
| TCGGTAGTTTCATGCAATAA+GGG | + | chr2_4:35447174-35447193 | Msa0326200:intron | 35.0% | |
| GAGATAAACATCACCTTCAA+CGG | - | chr2_4:35447431-35447450 | None:intergenic | 35.0% | |
| ! | GATGGGATGATAATTTGTGT+TGG | + | chr2_4:35447756-35447775 | Msa0326200:intron | 35.0% |
| AAGAGAGACTAAATGATTGG+AGG | - | chr2_4:35447883-35447902 | None:intergenic | 35.0% | |
| CCAAAGAGAGACTAAATGAT+TGG | - | chr2_4:35447886-35447905 | None:intergenic | 35.0% | |
| CCAATCATTTAGTCTCTCTT+TGG | + | chr2_4:35447883-35447902 | Msa0326200:intron | 35.0% | |
| TAACATCACACATTTCACCA+TGG | - | chr2_4:35448080-35448099 | None:intergenic | 35.0% | |
| ! | TTTGGGACAGATAAAGAACA+TGG | + | chr2_4:35448435-35448454 | Msa0326200:intron | 35.0% |
| TGCTCATAAAATGGATCTTC+AGG | - | chr2_4:35448471-35448490 | None:intergenic | 35.0% | |
| ! | AGATCCATTTTATGAGCAGA+TGG | + | chr2_4:35448473-35448492 | Msa0326200:CDS | 35.0% |
| GGAAAATAAAACACCTAAGG+AGG | - | chr2_4:35448568-35448587 | None:intergenic | 35.0% | |
| ! | GACTTGATGACATGAGTTTA+TGG | + | chr2_4:35448691-35448710 | Msa0326200:intron | 35.0% |
| GGATCTATTTGACTATGAAC+TGG | + | chr2_4:35448756-35448775 | Msa0326200:intron | 35.0% | |
| AATGCTGACAGAATTACATC+GGG | - | chr2_4:35448864-35448883 | None:intergenic | 35.0% | |
| TGTAATTCTGTCAGCATTTG+CGG | + | chr2_4:35448866-35448885 | Msa0326200:intron | 35.0% | |
| !!! | TGTTTTTTTCCTGTCTGTGT+AGG | + | chr2_4:35448942-35448961 | Msa0326200:intron | 35.0% |
| ! | ACAAAGGGGTGTATAGAAAA+GGG | - | chr2_4:35447128-35447147 | None:intergenic | 35.0% |
| ! | TACAAAGGGGTGTATAGAAA+AGG | - | chr2_4:35447129-35447148 | None:intergenic | 35.0% |
| TTCGGTAGTTTCATGCAATA+AGG | + | chr2_4:35447173-35447192 | Msa0326200:intron | 35.0% | |
| TCGGTAGTTTCATGCAATAA+GGG | + | chr2_4:35447174-35447193 | Msa0326200:intron | 35.0% | |
| GAGATAAACATCACCTTCAA+CGG | - | chr2_4:35447431-35447450 | None:intergenic | 35.0% | |
| ! | GATGGGATGATAATTTGTGT+TGG | + | chr2_4:35447756-35447775 | Msa0326200:intron | 35.0% |
| AAGAGAGACTAAATGATTGG+AGG | - | chr2_4:35447883-35447902 | None:intergenic | 35.0% | |
| CCAAAGAGAGACTAAATGAT+TGG | - | chr2_4:35447886-35447905 | None:intergenic | 35.0% | |
| CCAATCATTTAGTCTCTCTT+TGG | + | chr2_4:35447883-35447902 | Msa0326200:intron | 35.0% | |
| TAACATCACACATTTCACCA+TGG | - | chr2_4:35448080-35448099 | None:intergenic | 35.0% | |
| ! | TTTGGGACAGATAAAGAACA+TGG | + | chr2_4:35448435-35448454 | Msa0326200:intron | 35.0% |
| TGCTCATAAAATGGATCTTC+AGG | - | chr2_4:35448471-35448490 | None:intergenic | 35.0% | |
| ! | AGATCCATTTTATGAGCAGA+TGG | + | chr2_4:35448473-35448492 | Msa0326200:CDS | 35.0% |
| GGAAAATAAAACACCTAAGG+AGG | - | chr2_4:35448568-35448587 | None:intergenic | 35.0% | |
| ! | GACTTGATGACATGAGTTTA+TGG | + | chr2_4:35448691-35448710 | Msa0326200:intron | 35.0% |
| GGATCTATTTGACTATGAAC+TGG | + | chr2_4:35448756-35448775 | Msa0326200:intron | 35.0% | |
| AATGCTGACAGAATTACATC+GGG | - | chr2_4:35448864-35448883 | None:intergenic | 35.0% | |
| TGTAATTCTGTCAGCATTTG+CGG | + | chr2_4:35448866-35448885 | Msa0326200:intron | 35.0% | |
| !!! | TGTTTTTTTCCTGTCTGTGT+AGG | + | chr2_4:35448942-35448961 | Msa0326200:intron | 35.0% |
| ! | CAAAGGGGTGTATAGAAAAG+GGG | - | chr2_4:35447127-35447146 | None:intergenic | 40.0% |
| CGGTAGTTTCATGCAATAAG+GGG | + | chr2_4:35447175-35447194 | Msa0326200:intron | 40.0% | |
| TCATGCAATAAGGGGTAGTT+TGG | + | chr2_4:35447183-35447202 | Msa0326200:intron | 40.0% | |
| TCTTCCTCTTCTGAACAGAT+CGG | + | chr2_4:35447237-35447256 | Msa0326200:intron | 40.0% | |
| !! | AGTTGATGGAGGTGATAGAA+CGG | - | chr2_4:35447311-35447330 | None:intergenic | 40.0% |
| AGGAGTTGTGATTCGATAGT+GGG | - | chr2_4:35447334-35447353 | None:intergenic | 40.0% | |
| AAGGAGTTGTGATTCGATAG+TGG | - | chr2_4:35447335-35447354 | None:intergenic | 40.0% | |
| GAGGAAAACGCAAAAAGAGT+GGG | - | chr2_4:35447387-35447406 | None:intergenic | 40.0% | |
| TCAGTAATTGCAAATGGGGA+TGG | + | chr2_4:35447738-35447757 | Msa0326200:intron | 40.0% | |
| CAGTAATTGCAAATGGGGAT+GGG | + | chr2_4:35447739-35447758 | Msa0326200:intron | 40.0% | |
| GTGGTTACGTCTTTGTTACA+TGG | + | chr2_4:35448012-35448031 | Msa0326200:intron | 40.0% | |
| !! | TAATGGATAGAGGCATTGAG+TGG | + | chr2_4:35448344-35448363 | Msa0326200:intron | 40.0% |
| CTTTCCAATCAGCTACTCAT+GGG | + | chr2_4:35449009-35449028 | Msa0326200:CDS | 40.0% | |
| TTTCCAATCAGCTACTCATG+GGG | + | chr2_4:35449010-35449029 | Msa0326200:CDS | 40.0% | |
| ! | CAAAGGGGTGTATAGAAAAG+GGG | - | chr2_4:35447127-35447146 | None:intergenic | 40.0% |
| CGGTAGTTTCATGCAATAAG+GGG | + | chr2_4:35447175-35447194 | Msa0326200:intron | 40.0% | |
| TCATGCAATAAGGGGTAGTT+TGG | + | chr2_4:35447183-35447202 | Msa0326200:intron | 40.0% | |
| TCTTCCTCTTCTGAACAGAT+CGG | + | chr2_4:35447237-35447256 | Msa0326200:intron | 40.0% | |
| !! | AGTTGATGGAGGTGATAGAA+CGG | - | chr2_4:35447311-35447330 | None:intergenic | 40.0% |
| AGGAGTTGTGATTCGATAGT+GGG | - | chr2_4:35447334-35447353 | None:intergenic | 40.0% | |
| AAGGAGTTGTGATTCGATAG+TGG | - | chr2_4:35447335-35447354 | None:intergenic | 40.0% | |
| GAGGAAAACGCAAAAAGAGT+GGG | - | chr2_4:35447387-35447406 | None:intergenic | 40.0% | |
| TCAGTAATTGCAAATGGGGA+TGG | + | chr2_4:35447738-35447757 | Msa0326200:intron | 40.0% | |
| CAGTAATTGCAAATGGGGAT+GGG | + | chr2_4:35447739-35447758 | Msa0326200:intron | 40.0% | |
| GTGGTTACGTCTTTGTTACA+TGG | + | chr2_4:35448012-35448031 | Msa0326200:intron | 40.0% | |
| !! | TAATGGATAGAGGCATTGAG+TGG | + | chr2_4:35448344-35448363 | Msa0326200:intron | 40.0% |
| CTTTCCAATCAGCTACTCAT+GGG | + | chr2_4:35449009-35449028 | Msa0326200:CDS | 40.0% | |
| TTTCCAATCAGCTACTCATG+GGG | + | chr2_4:35449010-35449029 | Msa0326200:CDS | 40.0% | |
| ACATCAGCAGTGGTACAAAG+GGG | - | chr2_4:35447142-35447161 | None:intergenic | 45.0% | |
| CACATCAGCAGTGGTACAAA+GGG | - | chr2_4:35447143-35447162 | None:intergenic | 45.0% | |
| AGGAAGAGGAGAAGATTGTG+GGG | - | chr2_4:35447224-35447243 | None:intergenic | 45.0% | |
| GAGGAAGAGGAGAAGATTGT+GGG | - | chr2_4:35447225-35447244 | None:intergenic | 45.0% | |
| AGAGGAAGAGGAGAAGATTG+TGG | - | chr2_4:35447226-35447245 | None:intergenic | 45.0% | |
| GATCTGTTCAGAAGAGGAAG+AGG | - | chr2_4:35447238-35447257 | None:intergenic | 45.0% | |
| TCGTCTTCCTCTTCTCTCTT+TGG | + | chr2_4:35447265-35447284 | Msa0326200:intron | 45.0% | |
| !! | GATTCGATAGTGGGAGTTGA+TGG | - | chr2_4:35447325-35447344 | None:intergenic | 45.0% |
| GGAGAGAAAGGTAGTGATGA+AGG | - | chr2_4:35447354-35447373 | None:intergenic | 45.0% | |
| AAAAGAGTGGGAGGAAATGG+CGG | - | chr2_4:35447375-35447394 | None:intergenic | 45.0% | |
| GCAAAAAGAGTGGGAGGAAA+TGG | - | chr2_4:35447378-35447397 | None:intergenic | 45.0% | |
| GAAAACGCAAAAAGAGTGGG+AGG | - | chr2_4:35447384-35447403 | None:intergenic | 45.0% | |
| GGAGGAAAACGCAAAAAGAG+TGG | - | chr2_4:35447388-35447407 | None:intergenic | 45.0% | |
| ! | CTTTTTGCGTTTTCCTCCGA+CGG | + | chr2_4:35447390-35447409 | Msa0326200:intron | 45.0% |
| TTCAACGGAGAGAGAGATAG+CGG | - | chr2_4:35447416-35447435 | None:intergenic | 45.0% | |
| CTCTTTGGTTGTTCCTCTGA+AGG | + | chr2_4:35447898-35447917 | Msa0326200:intron | 45.0% | |
| CTTAATCACTACGCCTTCAG+AGG | - | chr2_4:35447914-35447933 | None:intergenic | 45.0% | |
| CAAAGCTTGTGCTCTGTCTT+GGG | - | chr2_4:35448258-35448277 | None:intergenic | 45.0% | |
| ! | CATTGAGTGGTGGAATTGGT+TGG | + | chr2_4:35448357-35448376 | Msa0326200:intron | 45.0% |
| GCAGCCATCTGCTCATAAAA+TGG | - | chr2_4:35448480-35448499 | None:intergenic | 45.0% | |
| TACACTGACATAGCCTCCTT+AGG | + | chr2_4:35448552-35448571 | Msa0326200:CDS | 45.0% | |
| ACAGAATTACATCGGGACAC+GGG | - | chr2_4:35448857-35448876 | None:intergenic | 45.0% | |
| GACAGAATTACATCGGGACA+CGG | - | chr2_4:35448858-35448877 | None:intergenic | 45.0% | |
| CATCAGCACGCAAGACTATA+TGG | - | chr2_4:35448900-35448919 | None:intergenic | 45.0% | |
| TGAGTAGCTGATTGGAAAGC+TGG | - | chr2_4:35449008-35449027 | None:intergenic | 45.0% | |
| GCTTTCCAATCAGCTACTCA+TGG | + | chr2_4:35449008-35449027 | Msa0326200:CDS | 45.0% | |
| ACATCAGCAGTGGTACAAAG+GGG | - | chr2_4:35447142-35447161 | None:intergenic | 45.0% | |
| CACATCAGCAGTGGTACAAA+GGG | - | chr2_4:35447143-35447162 | None:intergenic | 45.0% | |
| AGGAAGAGGAGAAGATTGTG+GGG | - | chr2_4:35447224-35447243 | None:intergenic | 45.0% | |
| GAGGAAGAGGAGAAGATTGT+GGG | - | chr2_4:35447225-35447244 | None:intergenic | 45.0% | |
| AGAGGAAGAGGAGAAGATTG+TGG | - | chr2_4:35447226-35447245 | None:intergenic | 45.0% | |
| GATCTGTTCAGAAGAGGAAG+AGG | - | chr2_4:35447238-35447257 | None:intergenic | 45.0% | |
| TCGTCTTCCTCTTCTCTCTT+TGG | + | chr2_4:35447265-35447284 | Msa0326200:intron | 45.0% | |
| !! | GATTCGATAGTGGGAGTTGA+TGG | - | chr2_4:35447325-35447344 | None:intergenic | 45.0% |
| GGAGAGAAAGGTAGTGATGA+AGG | - | chr2_4:35447354-35447373 | None:intergenic | 45.0% | |
| AAAAGAGTGGGAGGAAATGG+CGG | - | chr2_4:35447375-35447394 | None:intergenic | 45.0% | |
| GCAAAAAGAGTGGGAGGAAA+TGG | - | chr2_4:35447378-35447397 | None:intergenic | 45.0% | |
| GAAAACGCAAAAAGAGTGGG+AGG | - | chr2_4:35447384-35447403 | None:intergenic | 45.0% | |
| GGAGGAAAACGCAAAAAGAG+TGG | - | chr2_4:35447388-35447407 | None:intergenic | 45.0% | |
| ! | CTTTTTGCGTTTTCCTCCGA+CGG | + | chr2_4:35447390-35447409 | Msa0326200:intron | 45.0% |
| TTCAACGGAGAGAGAGATAG+CGG | - | chr2_4:35447416-35447435 | None:intergenic | 45.0% | |
| CTCTTTGGTTGTTCCTCTGA+AGG | + | chr2_4:35447898-35447917 | Msa0326200:intron | 45.0% | |
| CTTAATCACTACGCCTTCAG+AGG | - | chr2_4:35447914-35447933 | None:intergenic | 45.0% | |
| CAAAGCTTGTGCTCTGTCTT+GGG | - | chr2_4:35448258-35448277 | None:intergenic | 45.0% | |
| ! | CATTGAGTGGTGGAATTGGT+TGG | + | chr2_4:35448357-35448376 | Msa0326200:intron | 45.0% |
| GCAGCCATCTGCTCATAAAA+TGG | - | chr2_4:35448480-35448499 | None:intergenic | 45.0% | |
| TACACTGACATAGCCTCCTT+AGG | + | chr2_4:35448552-35448571 | Msa0326200:CDS | 45.0% | |
| ACAGAATTACATCGGGACAC+GGG | - | chr2_4:35448857-35448876 | None:intergenic | 45.0% | |
| GACAGAATTACATCGGGACA+CGG | - | chr2_4:35448858-35448877 | None:intergenic | 45.0% | |
| CATCAGCACGCAAGACTATA+TGG | - | chr2_4:35448900-35448919 | None:intergenic | 45.0% | |
| TGAGTAGCTGATTGGAAAGC+TGG | - | chr2_4:35449008-35449027 | None:intergenic | 45.0% | |
| GCTTTCCAATCAGCTACTCA+TGG | + | chr2_4:35449008-35449027 | Msa0326200:CDS | 45.0% | |
| CCACATCAGCAGTGGTACAA+AGG | - | chr2_4:35447144-35447163 | None:intergenic | 50.0% | |
| CCTTTGTACCACTGCTGATG+TGG | + | chr2_4:35447141-35447160 | Msa0326200:intron | 50.0% | |
| CTGATGTGGCAGGGGTAATT+CGG | + | chr2_4:35447155-35447174 | Msa0326200:intron | 50.0% | |
| AAGGCCGATCTGTTCAGAAG+AGG | - | chr2_4:35447244-35447263 | None:intergenic | 50.0% | |
| GAGAGAAGAGGAAGACGAGA+AGG | - | chr2_4:35447263-35447282 | None:intergenic | 50.0% | |
| ! | AGGTGATAGAACGGCATCGA+CGG | - | chr2_4:35447302-35447321 | None:intergenic | 50.0% |
| !! | TCGATAGTGGGAGTTGATGG+AGG | - | chr2_4:35447322-35447341 | None:intergenic | 50.0% |
| GCTATCTCTCTCTCCGTTGA+AGG | + | chr2_4:35447415-35447434 | Msa0326200:intron | 50.0% | |
| GCAAAGCTTGTGCTCTGTCT+TGG | - | chr2_4:35448259-35448278 | None:intergenic | 50.0% | |
| !! | TGGATAGAGGCATTGAGTGG+TGG | + | chr2_4:35448347-35448366 | Msa0326200:intron | 50.0% |
| !! | GAGGCATTGAGTGGTGGAAT+TGG | + | chr2_4:35448353-35448372 | Msa0326200:intron | 50.0% |
| CAGAATTACATCGGGACACG+GGG | - | chr2_4:35448856-35448875 | None:intergenic | 50.0% | |
| TCCTGTCTGTGTAGGAACTC+TGG | + | chr2_4:35448950-35448969 | Msa0326200:intron | 50.0% | |
| ACTCTGGCAAAGTACACTGC+TGG | + | chr2_4:35448966-35448985 | Msa0326200:CDS | 50.0% | |
| TCTCCCCATGAGTAGCTGAT+TGG | - | chr2_4:35449016-35449035 | None:intergenic | 50.0% | |
| ACCTCACAAGAGAGACTGCA+TGG | + | chr2_4:35449060-35449079 | Msa0326200:CDS | 50.0% | |
| CCTCACAAGAGAGACTGCAT+GGG | + | chr2_4:35449061-35449080 | Msa0326200:CDS | 50.0% | |
| CCACATCAGCAGTGGTACAA+AGG | - | chr2_4:35447144-35447163 | None:intergenic | 50.0% | |
| CCTTTGTACCACTGCTGATG+TGG | + | chr2_4:35447141-35447160 | Msa0326200:intron | 50.0% | |
| CTGATGTGGCAGGGGTAATT+CGG | + | chr2_4:35447155-35447174 | Msa0326200:intron | 50.0% | |
| AAGGCCGATCTGTTCAGAAG+AGG | - | chr2_4:35447244-35447263 | None:intergenic | 50.0% | |
| GAGAGAAGAGGAAGACGAGA+AGG | - | chr2_4:35447263-35447282 | None:intergenic | 50.0% | |
| ! | AGGTGATAGAACGGCATCGA+CGG | - | chr2_4:35447302-35447321 | None:intergenic | 50.0% |
| !! | TCGATAGTGGGAGTTGATGG+AGG | - | chr2_4:35447322-35447341 | None:intergenic | 50.0% |
| GCTATCTCTCTCTCCGTTGA+AGG | + | chr2_4:35447415-35447434 | Msa0326200:intron | 50.0% | |
| GCAAAGCTTGTGCTCTGTCT+TGG | - | chr2_4:35448259-35448278 | None:intergenic | 50.0% | |
| !! | TGGATAGAGGCATTGAGTGG+TGG | + | chr2_4:35448347-35448366 | Msa0326200:intron | 50.0% |
| !! | GAGGCATTGAGTGGTGGAAT+TGG | + | chr2_4:35448353-35448372 | Msa0326200:intron | 50.0% |
| CAGAATTACATCGGGACACG+GGG | - | chr2_4:35448856-35448875 | None:intergenic | 50.0% | |
| TCCTGTCTGTGTAGGAACTC+TGG | + | chr2_4:35448950-35448969 | Msa0326200:intron | 50.0% | |
| ACTCTGGCAAAGTACACTGC+TGG | + | chr2_4:35448966-35448985 | Msa0326200:CDS | 50.0% | |
| TCTCCCCATGAGTAGCTGAT+TGG | - | chr2_4:35449016-35449035 | None:intergenic | 50.0% | |
| ACCTCACAAGAGAGACTGCA+TGG | + | chr2_4:35449060-35449079 | Msa0326200:CDS | 50.0% | |
| CCTCACAAGAGAGACTGCAT+GGG | + | chr2_4:35449061-35449080 | Msa0326200:CDS | 50.0% | |
| TGTACCACTGCTGATGTGGC+AGG | + | chr2_4:35447145-35447164 | Msa0326200:intron | 55.0% | |
| GTACCACTGCTGATGTGGCA+GGG | + | chr2_4:35447146-35447165 | Msa0326200:intron | 55.0% | |
| TACCACTGCTGATGTGGCAG+GGG | + | chr2_4:35447147-35447166 | Msa0326200:intron | 55.0% | |
| GGTGAGGCCAAAGAGAGAAG+AGG | - | chr2_4:35447275-35447294 | None:intergenic | 55.0% | |
| ! | GGAGGAAATGGCGGAGAGAA+AGG | - | chr2_4:35447366-35447385 | None:intergenic | 55.0% |
| GCCAGAGTTCCTACACAGAC+AGG | - | chr2_4:35448954-35448973 | None:intergenic | 55.0% | |
| CCCATGCAGTCTCTCTTGTG+AGG | - | chr2_4:35449064-35449083 | None:intergenic | 55.0% | |
| GAGAGACTGCATGGGAAGCA+TGG | + | chr2_4:35449069-35449088 | Msa0326200:CDS | 55.0% | |
| TGTACCACTGCTGATGTGGC+AGG | + | chr2_4:35447145-35447164 | Msa0326200:intron | 55.0% | |
| GTACCACTGCTGATGTGGCA+GGG | + | chr2_4:35447146-35447165 | Msa0326200:intron | 55.0% | |
| TACCACTGCTGATGTGGCAG+GGG | + | chr2_4:35447147-35447166 | Msa0326200:intron | 55.0% | |
| GGTGAGGCCAAAGAGAGAAG+AGG | - | chr2_4:35447275-35447294 | None:intergenic | 55.0% | |
| ! | GGAGGAAATGGCGGAGAGAA+AGG | - | chr2_4:35447366-35447385 | None:intergenic | 55.0% |
| GCCAGAGTTCCTACACAGAC+AGG | - | chr2_4:35448954-35448973 | None:intergenic | 55.0% | |
| CCCATGCAGTCTCTCTTGTG+AGG | - | chr2_4:35449064-35449083 | None:intergenic | 55.0% | |
| GAGAGACTGCATGGGAAGCA+TGG | + | chr2_4:35449069-35449088 | Msa0326200:CDS | 55.0% | |
| TACCCCTGCCACATCAGCAG+TGG | - | chr2_4:35447152-35447171 | None:intergenic | 60.0% | |
| !! | TAGAACGGCATCGACGGCGA+CGG | - | chr2_4:35447296-35447315 | None:intergenic | 60.0% |
| ! | GAGAGAGAGATAGCGGCCGT+CGG | - | chr2_4:35447409-35447428 | None:intergenic | 60.0% |
| TACCCCTGCCACATCAGCAG+TGG | - | chr2_4:35447152-35447171 | None:intergenic | 60.0% | |
| !! | TAGAACGGCATCGACGGCGA+CGG | - | chr2_4:35447296-35447315 | None:intergenic | 60.0% |
| ! | GAGAGAGAGATAGCGGCCGT+CGG | - | chr2_4:35447409-35447428 | None:intergenic | 60.0% |
| ! | AGAGAGATAGCGGCCGTCGG+AGG | - | chr2_4:35447406-35447425 | None:intergenic | 65.0% |
| ! | AGAGAGATAGCGGCCGTCGG+AGG | - | chr2_4:35447406-35447425 | None:intergenic | 65.0% |
| !! | CGGCATCGACGGCGACGGTG+AGG | - | chr2_4:35447291-35447310 | None:intergenic | 75.0% |
| !! | CGGCATCGACGGCGACGGTG+AGG | - | chr2_4:35447291-35447310 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 35447041 | 35449124 | 35447041 | ID=Msa0326200;Name=Msa0326200 |
| chr2_4 | mRNA | 35447041 | 35449124 | 35447041 | ID=Msa0326200-mRNA-1;Parent=Msa0326200;Name=Msa0326200-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|0.66|0.5|0.66|3|0|97 |
| chr2_4 | exon | 35447041 | 35447044 | 35447041 | ID=Msa0326200-mRNA-1:exon:11027;Parent=Msa0326200-mRNA-1 |
| chr2_4 | exon | 35448445 | 35448573 | 35448445 | ID=Msa0326200-mRNA-1:exon:11028;Parent=Msa0326200-mRNA-1 |
| chr2_4 | exon | 35448964 | 35449124 | 35448964 | ID=Msa0326200-mRNA-1:exon:11029;Parent=Msa0326200-mRNA-1 |
| chr2_4 | CDS | 35447041 | 35447044 | 35447041 | ID=Msa0326200-mRNA-1:cds;Parent=Msa0326200-mRNA-1 |
| chr2_4 | CDS | 35448445 | 35448573 | 35448445 | ID=Msa0326200-mRNA-1:cds;Parent=Msa0326200-mRNA-1 |
| chr2_4 | CDS | 35448964 | 35449124 | 35448964 | ID=Msa0326200-mRNA-1:cds;Parent=Msa0326200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
