AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0647800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0647800 MtrunA17_Chr4g0039251 76.765 439 39 4 5 380 48 486 0.0 663
Msa0647800 MtrunA17_Chr4g0039231 79.620 368 26 4 76 395 1 367 0.0 568
Msa0647800 MtrunA17_Chr4g0039261 57.437 437 120 5 7 380 11 444 2.67e-164 478
Msa0647800 MtrunA17_Chr6g0477811 47.585 414 151 7 30 380 47 457 1.96e-118 360
Msa0647800 MtrunA17_Chr4g0050251 37.731 432 186 7 15 380 43 457 9.87e-83 267
Msa0647800 MtrunA17_Chr4g0050261 36.226 461 194 7 15 380 43 498 2.24e-80 262
Msa0647800 MtrunA17_Chr4g0050291 37.617 428 185 8 23 380 21 436 6.38e-79 256
Msa0647800 MtrunA17_Chr4g0026731 37.789 389 184 10 62 396 6 390 1.27e-70 233
Msa0647800 MtrunA17_Chr4g0050221 44.853 272 113 5 23 259 6 275 2.26e-67 225
Msa0647800 MtrunA17_Chr4g0050201 38.438 320 152 8 77 372 4 302 4.09e-57 196
Msa0647800 MtrunA17_Chr2g0327241 34.270 356 186 8 27 346 104 447 1.40e-51 184
Msa0647800 MtrunA17_Chr3g0102731 34.242 330 171 8 49 343 97 415 4.61e-47 170
Msa0647800 MtrunA17_Chr5g0446901 35.380 342 157 10 48 343 107 430 5.14e-45 164
Msa0647800 MtrunA17_Chr1g0176451 32.754 345 183 8 36 341 9 343 2.39e-43 159
Msa0647800 MtrunA17_Chr7g0267971 32.773 357 194 9 29 343 137 489 3.29e-43 160
Msa0647800 MtrunA17_Chr1g0176441 31.728 353 199 8 29 341 148 498 3.63e-42 158
Msa0647800 MtrunA17_Chr2g0318061 34.431 334 153 13 48 341 29 336 1.02e-41 151
Msa0647800 MtrunA17_Chr1g0198931 32.948 346 161 12 47 343 104 427 1.06e-41 156
Msa0647800 MtrunA17_Chr5g0408061 32.440 336 171 10 48 341 63 384 7.78e-41 153
Msa0647800 MtrunA17_Chr1g0200651 33.535 331 172 9 50 343 90 409 1.50e-39 150
Msa0647800 MtrunA17_Chr1g0208391 30.471 361 176 9 32 345 75 407 1.55e-37 144
Msa0647800 MtrunA17_Chr1g0213091 31.014 345 189 7 47 345 119 460 6.88e-37 142
Msa0647800 MtrunA17_Chr7g0263351 37.652 247 109 6 47 254 124 364 7.20e-37 142
Msa0647800 MtrunA17_Chr8g0359931 34.836 244 118 5 48 255 64 302 7.25e-35 136
Msa0647800 MtrunA17_Chr7g0264441 36.777 242 119 6 44 251 273 514 1.05e-34 136
Msa0647800 MtrunA17_Chr1g0199471 35.510 245 118 8 44 251 511 752 1.64e-34 136
Msa0647800 MtrunA17_Chr1g0180971 36.328 256 125 7 30 251 397 648 2.74e-34 135
Msa0647800 MtrunA17_Chr8g0393191 32.013 303 167 8 50 318 69 366 1.82e-32 130
Msa0647800 MtrunA17_Chr4g0028621 33.700 273 136 9 30 268 491 752 1.67e-28 118
Msa0647800 MtrunA17_Chr7g0262251 31.660 259 126 8 50 259 175 431 7.70e-28 116
Msa0647800 MtrunA17_Chr7g0262251 27.855 359 174 15 50 352 827 1156 8.51e-23 101
Msa0647800 MtrunA17_Chr5g0411621 33.195 241 123 7 50 255 51 288 8.97e-27 113
Msa0647800 MtrunA17_Chr4g0004021 27.089 347 175 14 63 347 199 529 4.69e-26 111
Msa0647800 MtrunA17_Chr4g0004021 32.536 209 107 6 50 224 863 1071 2.08e-20 94.0
Msa0647800 MtrunA17_Chr1g0202431 32.510 243 124 6 46 255 46 281 1.60e-25 108
Msa0647800 MtrunA17_Chr2g0332211 27.324 355 190 12 50 347 263 606 5.57e-25 108
Msa0647800 MtrunA17_Chr2g0332211 27.950 322 163 10 50 330 939 1232 4.84e-22 99.4
Msa0647800 MtrunA17_Chr2g0332221 27.042 355 191 13 50 347 182 525 6.18e-25 107
Msa0647800 MtrunA17_Chr2g0332221 27.900 319 167 11 50 330 855 1148 2.50e-22 100
Msa0647800 MtrunA17_Chr2g0332241 27.042 355 191 13 50 347 182 525 6.47e-25 107
Msa0647800 MtrunA17_Chr2g0332241 27.900 319 167 11 50 330 856 1149 2.66e-22 100
Msa0647800 MtrunA17_Chr4g0003971 29.391 279 124 9 50 259 161 435 1.12e-24 107
Msa0647800 MtrunA17_Chr4g0003971 33.168 202 102 5 50 218 825 1026 4.02e-20 93.2
Msa0647800 MtrunA17_Chr8g0384391 34.335 233 123 6 43 245 49 281 1.37e-24 106
Msa0647800 MtrunA17_Chr4g0003981 26.801 347 176 14 63 347 201 531 1.45e-24 106
Msa0647800 MtrunA17_Chr4g0003981 33.493 209 105 6 50 224 866 1074 5.23e-22 99.0
Msa0647800 MtrunA17_Chr8g0340651 25.057 439 218 17 42 399 166 574 3.05e-24 105
Msa0647800 MtrunA17_Chr8g0340651 29.796 245 132 8 49 253 904 1148 6.54e-21 95.9
Msa0647800 MtrunA17_Chr2g0331081 26.042 384 199 14 42 350 167 540 4.90e-24 105
Msa0647800 MtrunA17_Chr2g0331081 27.500 320 169 11 49 330 890 1184 1.22e-22 100
Msa0647800 MtrunA17_Chr7g0262261 27.624 362 183 11 50 352 803 1144 8.78e-24 104
Msa0647800 MtrunA17_Chr7g0262261 29.197 274 125 7 50 256 133 404 1.24e-23 103
Msa0647800 MtrunA17_Chr2g0316301 33.465 254 126 8 42 256 62 311 9.16e-24 103
Msa0647800 MtrunA17_Chr7g0262221 28.352 261 132 8 50 259 163 419 6.54e-23 101
Msa0647800 MtrunA17_Chr7g0262221 29.231 325 165 13 50 334 854 1153 3.12e-20 93.6
Msa0647800 MtrunA17_Chr3g0138261 29.032 248 124 6 63 259 194 440 8.08e-23 101
Msa0647800 MtrunA17_Chr3g0138261 35.407 209 101 7 50 224 870 1078 2.62e-22 100
Msa0647800 MtrunA17_Chr3g0093331 30.000 230 133 5 51 256 14 239 9.01e-23 97.1
Msa0647800 MtrunA17_Chr3g0130331 31.200 250 129 8 45 256 53 297 1.25e-22 100
Msa0647800 MtrunA17_Chr7g0265971 24.021 383 218 11 50 372 193 562 1.62e-22 100
Msa0647800 MtrunA17_Chr7g0265971 24.796 367 207 12 50 376 887 1224 1.58e-17 85.5
Msa0647800 MtrunA17_Chr0c20g0493841 28.514 249 124 8 63 259 196 442 2.01e-22 100
Msa0647800 MtrunA17_Chr0c20g0493841 27.723 303 157 13 10 256 808 1104 5.86e-17 83.6
Msa0647800 MtrunA17_Chr3g0104621 24.494 445 224 16 38 401 40 453 2.53e-22 100
Msa0647800 MtrunA17_Chr3g0104621 29.880 251 130 9 49 253 763 1013 6.00e-22 99.0
Msa0647800 MtrunA17_Chr5g0429871 29.310 290 153 10 41 281 657 943 5.35e-22 99.0
Msa0647800 MtrunA17_Chr5g0429871 36.220 127 72 2 141 259 128 253 2.24e-17 84.7
Msa0647800 MtrunA17_Chr7g0262231 28.112 249 125 7 63 259 190 436 1.89e-21 97.4
Msa0647800 MtrunA17_Chr7g0262231 33.014 209 106 7 50 224 883 1091 3.56e-19 90.5
Msa0647800 MtrunA17_Chr1g0148811 28.873 284 129 12 46 259 148 428 2.78e-21 96.7
Msa0647800 MtrunA17_Chr1g0148811 25.185 405 229 16 7 351 795 1185 4.05e-17 84.0
Msa0647800 MtrunA17_Chr7g0262241 28.308 325 168 12 50 334 880 1179 2.80e-21 96.7
Msa0647800 MtrunA17_Chr7g0262241 28.514 249 124 8 63 259 190 436 5.53e-21 95.9
Msa0647800 MtrunA17_Chr7g0265981 26.761 355 201 12 50 376 895 1218 4.06e-21 96.3
Msa0647800 MtrunA17_Chr7g0265981 24.931 361 191 12 50 347 199 542 1.63e-20 94.4
Msa0647800 MtrunA17_Chr7g0261971 27.711 249 126 7 63 259 186 432 5.38e-21 95.9
Msa0647800 MtrunA17_Chr7g0261971 31.100 209 110 8 50 224 875 1083 2.92e-17 84.3
Msa0647800 MtrunA17_Chr4g0039221 100.000 39 0 0 30 68 9 47 5.72e-21 86.3
Msa0647800 MtrunA17_Chr7g0261981 26.908 249 128 7 63 259 190 436 7.68e-21 95.5
Msa0647800 MtrunA17_Chr7g0261981 32.536 209 107 8 50 224 861 1069 6.01e-19 89.7
Msa0647800 MtrunA17_Chr1g0148841 27.976 336 163 12 50 334 877 1184 1.60e-20 94.4
Msa0647800 MtrunA17_Chr1g0148841 24.668 377 189 15 49 347 165 524 5.33e-20 92.8
Msa0647800 MtrunA17_Chr7g0261951 27.711 249 126 7 63 259 190 436 1.72e-20 94.4
Msa0647800 MtrunA17_Chr7g0261951 32.536 209 107 8 50 224 879 1087 3.56e-19 90.5
Msa0647800 MtrunA17_Chr7g0265991 26.205 332 173 13 50 334 71 377 2.23e-20 93.6
Msa0647800 MtrunA17_Chr4g0062871 27.076 277 133 9 50 259 150 424 2.26e-20 94.0
Msa0647800 MtrunA17_Chr4g0062871 30.159 252 148 9 33 256 839 1090 3.32e-19 90.5
Msa0647800 MtrunA17_Chr1g0198291 27.536 345 172 15 38 309 179 518 2.69e-20 94.0
Msa0647800 MtrunA17_Chr1g0198291 30.041 243 130 9 49 251 893 1135 3.87e-19 90.1
Msa0647800 MtrunA17_Chr4g0065231 32.222 180 103 3 95 256 138 316 2.92e-20 93.2
Msa0647800 MtrunA17_Chr1g0171351 26.056 284 139 8 44 259 170 450 5.45e-20 92.8
Msa0647800 MtrunA17_Chr1g0171351 24.257 404 214 11 49 399 893 1257 1.66e-19 91.3
Msa0647800 MtrunA17_Chr4g0069211 28.358 268 130 11 50 259 167 430 3.77e-19 90.1
Msa0647800 MtrunA17_Chr4g0069211 27.969 261 133 9 10 221 796 1050 4.72e-15 77.4
Msa0647800 MtrunA17_Chr7g0266001 22.310 381 227 9 50 372 78 447 2.66e-18 87.4
Msa0647800 MtrunA17_Chr7g0265961 24.225 355 188 12 31 309 162 511 3.01e-18 87.4
Msa0647800 MtrunA17_Chr7g0265961 26.146 371 180 11 49 376 830 1149 7.89e-17 83.2
Msa0647800 MtrunA17_Chr7g0262321 36.220 127 72 2 141 259 34 159 5.02e-17 83.6
Msa0647800 MtrunA17_Chr7g0262321 31.481 216 109 9 45 224 563 775 6.86e-17 83.2
Msa0647800 MtrunA17_Chr6g0472481 29.082 196 106 7 50 212 13 208 3.36e-14 72.4
Msa0647800 MtrunA17_Chr4g0047831 45.783 83 38 1 141 216 1 83 3.62e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0647800 AT3G21090.1 61.905 420 97 4 24 380 19 438 6.10e-180 518
Msa0647800 AT1G51500.1 59.716 422 105 5 24 380 18 439 9.67e-173 499
Msa0647800 AT1G51460.1 53.647 425 124 5 29 380 9 433 1.02e-139 415
Msa0647800 AT1G17840.1 49.275 414 144 7 30 380 50 460 2.85e-121 368
Msa0647800 AT2G28070.2 31.116 421 211 10 27 380 111 519 4.18e-52 186
Msa0647800 AT2G28070.1 31.116 421 211 10 27 380 111 519 4.18e-52 186
Msa0647800 AT2G01320.7 28.610 374 208 8 14 345 48 404 4.93e-46 166
Msa0647800 AT2G01320.6 28.610 374 208 8 14 345 48 404 4.93e-46 166
Msa0647800 AT2G01320.8 28.610 374 208 8 14 345 48 404 3.19e-45 166
Msa0647800 AT2G01320.5 28.610 374 208 8 14 345 48 404 3.19e-45 166
Msa0647800 AT2G01320.3 28.610 374 208 8 14 345 48 404 5.41e-45 166
Msa0647800 AT2G01320.2 28.610 374 208 8 14 345 48 404 6.11e-45 166
Msa0647800 AT2G01320.1 28.610 374 208 8 14 345 48 404 6.45e-45 166
Msa0647800 AT2G01320.4 28.610 374 208 8 14 345 48 404 6.45e-45 166
Msa0647800 AT5G06530.3 31.180 356 191 10 29 338 156 503 4.41e-42 157
Msa0647800 AT5G06530.2 31.180 356 191 10 29 338 156 503 6.13e-42 157
Msa0647800 AT5G06530.1 31.180 356 191 10 29 338 156 503 6.13e-42 157
Msa0647800 AT1G31770.1 31.412 347 160 9 44 341 75 392 1.49e-41 155
Msa0647800 AT3G13220.1 33.934 333 163 11 48 339 104 420 1.54e-41 156
Msa0647800 AT3G25620.1 30.523 344 176 10 46 343 95 421 1.68e-39 147
Msa0647800 AT4G27420.1 32.653 343 165 10 44 343 60 379 1.73e-39 150
Msa0647800 AT3G25620.2 30.523 344 176 10 46 343 95 421 6.46e-39 148
Msa0647800 AT5G06530.4 33.824 272 147 6 94 338 43 308 2.02e-38 145
Msa0647800 AT3G53510.1 37.959 245 111 6 47 254 123 363 1.23e-37 145
Msa0647800 AT1G71960.1 32.353 340 160 13 48 341 81 396 3.00e-37 144
Msa0647800 AT2G39350.1 39.669 242 111 6 47 254 106 346 3.28e-37 144
Msa0647800 AT2G37010.2 34.397 282 138 9 30 275 484 754 6.83e-37 144
Msa0647800 AT2G37010.1 34.397 282 138 9 30 275 484 754 6.83e-37 144
Msa0647800 AT2G37360.1 36.327 245 115 6 47 254 130 370 8.18e-37 143
Msa0647800 AT3G55090.1 31.579 361 203 9 47 364 104 463 3.46e-35 138
Msa0647800 AT1G53390.1 35.938 256 126 9 30 251 507 758 6.20e-35 138
Msa0647800 AT3G55130.1 37.037 243 115 7 48 254 97 337 1.05e-34 137
Msa0647800 AT3G55110.1 35.537 242 120 6 48 254 89 329 1.10e-33 134
Msa0647800 AT3G55100.1 37.052 251 119 8 42 255 41 289 1.76e-33 133
Msa0647800 AT3G55100.2 37.052 251 119 8 42 255 41 289 1.76e-33 133
Msa0647800 AT5G13580.1 39.344 244 109 7 47 254 105 345 3.94e-33 132
Msa0647800 AT5G60740.1 34.672 274 132 9 30 268 499 760 1.33e-32 131
Msa0647800 AT4G25750.1 33.913 230 122 5 58 259 38 265 1.65e-28 118
Msa0647800 AT1G15520.2 25.624 441 219 17 38 401 159 567 1.46e-26 113
Msa0647800 AT1G15520.2 34.685 222 107 8 50 233 852 1073 3.81e-23 102
Msa0647800 AT1G15520.1 26.018 442 216 18 38 401 159 567 2.52e-26 112
Msa0647800 AT1G15520.1 35.407 209 101 7 50 224 852 1060 6.72e-23 102
Msa0647800 AT2G13610.1 30.909 275 150 8 47 290 59 324 1.81e-25 109
Msa0647800 AT5G19410.2 28.980 245 136 4 50 256 75 319 4.62e-25 108
Msa0647800 AT5G19410.1 28.980 245 136 4 50 256 66 310 4.70e-25 108
Msa0647800 AT1G59870.1 26.316 304 155 7 41 277 177 478 7.02e-25 108
Msa0647800 AT1G59870.1 26.586 331 170 13 49 335 893 1194 5.48e-22 99.4
Msa0647800 AT3G30842.1 36.486 222 103 10 50 233 848 1069 3.53e-24 105
Msa0647800 AT3G30842.1 26.394 269 128 9 50 250 161 427 5.92e-18 87.0
Msa0647800 AT3G53480.1 25.128 390 195 14 50 361 189 559 7.66e-24 105
Msa0647800 AT3G53480.1 29.508 244 130 9 49 251 876 1118 4.41e-19 90.5
Msa0647800 AT4G15233.8 30.798 263 139 11 30 251 791 1051 1.77e-23 103
Msa0647800 AT4G15233.8 23.958 384 202 15 36 349 143 506 1.98e-17 85.5
Msa0647800 AT4G15236.1 30.418 263 140 11 30 251 798 1058 1.82e-23 103
Msa0647800 AT4G15236.1 24.457 368 188 14 50 349 168 513 2.37e-17 85.1
Msa0647800 AT4G15230.4 30.645 248 132 10 44 251 742 989 1.88e-23 103
Msa0647800 AT4G15230.4 25.061 411 218 17 19 351 41 439 7.79e-20 92.8
Msa0647800 AT4G15233.1 30.798 263 139 11 30 251 800 1060 2.02e-23 103
Msa0647800 AT4G15233.1 23.664 393 201 15 36 349 143 515 3.92e-17 84.3
Msa0647800 AT4G15230.3 30.645 248 132 10 44 251 821 1068 2.10e-23 103
Msa0647800 AT4G15230.3 25.061 411 218 17 19 351 120 518 9.14e-20 92.8
Msa0647800 AT4G15230.1 30.645 248 132 10 44 251 821 1068 2.10e-23 103
Msa0647800 AT4G15230.1 25.061 411 218 17 19 351 120 518 9.14e-20 92.8
Msa0647800 AT4G15233.7 30.798 263 139 11 30 251 782 1042 2.16e-23 103
Msa0647800 AT4G15233.7 24.800 375 201 15 36 349 143 497 9.88e-19 89.4
Msa0647800 AT4G15233.3 30.798 263 139 11 30 251 738 998 2.31e-23 103
Msa0647800 AT4G15233.3 23.664 393 201 15 36 349 81 453 5.45e-17 84.0
Msa0647800 AT4G15233.6 30.798 263 139 11 30 251 738 998 2.31e-23 103
Msa0647800 AT4G15233.6 23.664 393 201 15 36 349 81 453 5.45e-17 84.0
Msa0647800 AT4G15233.2 30.798 263 139 11 30 251 800 1060 2.31e-23 103
Msa0647800 AT4G15233.2 23.664 393 201 15 36 349 143 515 3.95e-17 84.3
Msa0647800 AT4G15230.2 30.645 248 132 10 44 251 821 1068 2.37e-23 103
Msa0647800 AT4G15230.2 25.061 411 218 17 19 351 120 518 1.20e-19 92.4
Msa0647800 AT1G15210.1 27.899 276 132 7 50 259 184 458 4.35e-23 102
Msa0647800 AT1G15210.1 27.052 329 171 14 49 335 866 1167 6.90e-21 95.9
Msa0647800 AT5G52860.1 31.298 262 139 8 46 270 40 297 6.18e-23 101
Msa0647800 AT3G16340.1 27.609 297 146 9 30 259 142 436 1.37e-22 101
Msa0647800 AT3G16340.1 31.429 245 128 11 49 253 840 1084 5.23e-22 99.4
Msa0647800 AT2G37280.1 27.027 296 142 8 49 277 153 441 4.90e-22 99.8
Msa0647800 AT2G37280.1 29.289 239 130 8 34 233 823 1061 3.39e-18 87.8
Msa0647800 AT2G37280.2 27.027 296 142 8 49 277 153 441 4.92e-22 99.4
Msa0647800 AT2G37280.2 29.289 239 130 8 34 233 823 1061 3.17e-18 87.8
Msa0647800 AT4G15215.8 30.242 248 133 10 44 251 808 1055 4.92e-22 99.4
Msa0647800 AT4G15215.8 27.476 313 146 13 19 259 114 417 7.14e-17 83.6
Msa0647800 AT4G15215.10 30.242 248 133 10 44 251 808 1055 4.92e-22 99.4
Msa0647800 AT4G15215.10 27.476 313 146 13 19 259 114 417 7.14e-17 83.6
Msa0647800 AT4G15215.6 30.242 248 133 10 44 251 808 1055 4.92e-22 99.4
Msa0647800 AT4G15215.6 27.476 313 146 13 19 259 114 417 7.14e-17 83.6
Msa0647800 AT4G15215.7 30.242 248 133 10 44 251 808 1055 4.92e-22 99.4
Msa0647800 AT4G15215.7 27.476 313 146 13 19 259 114 417 7.14e-17 83.6
Msa0647800 AT4G15215.11 30.242 248 133 10 44 251 818 1065 5.50e-22 99.4
Msa0647800 AT4G15215.11 26.837 313 155 12 19 259 117 427 2.92e-17 85.1
Msa0647800 AT3G16340.2 31.429 245 128 11 49 253 835 1079 5.52e-22 99.4
Msa0647800 AT3G16340.2 27.852 298 139 11 30 259 142 431 5.88e-21 96.3
Msa0647800 AT4G15215.1 29.435 248 135 9 44 251 811 1058 5.91e-22 99.4
Msa0647800 AT4G15215.1 27.476 313 146 13 19 259 117 420 8.86e-17 83.6
Msa0647800 AT4G15215.9 30.242 248 133 10 44 251 815 1062 6.03e-22 99.4
Msa0647800 AT4G15215.9 26.837 313 155 12 19 259 114 424 3.37e-17 84.7
Msa0647800 AT4G15215.4 30.242 248 133 10 44 251 815 1062 6.03e-22 99.4
Msa0647800 AT4G15215.4 26.837 313 155 12 19 259 114 424 3.37e-17 84.7
Msa0647800 AT4G15215.5 30.242 248 133 10 44 251 815 1062 6.03e-22 99.4
Msa0647800 AT4G15215.5 26.837 313 155 12 19 259 114 424 3.37e-17 84.7
Msa0647800 AT4G15215.3 30.242 248 133 10 44 251 815 1062 6.03e-22 99.4
Msa0647800 AT4G15215.3 26.837 313 155 12 19 259 114 424 3.37e-17 84.7
Msa0647800 AT4G15215.2 30.242 248 133 10 44 251 815 1062 6.03e-22 99.4
Msa0647800 AT4G15215.2 26.837 313 155 12 19 259 114 424 3.37e-17 84.7
Msa0647800 AT2G37280.4 28.470 281 140 8 50 277 11 283 9.91e-22 98.6
Msa0647800 AT2G37280.4 29.289 239 130 8 34 233 665 903 3.05e-18 87.8
Msa0647800 AT2G29940.1 28.041 296 143 10 50 277 175 468 1.10e-21 98.6
Msa0647800 AT2G29940.1 30.144 209 113 7 49 224 852 1060 4.53e-21 96.7
Msa0647800 AT1G53270.1 35.052 194 104 6 76 249 90 281 4.80e-21 95.9
Msa0647800 AT4G15233.5 34.254 181 95 7 95 251 737 917 1.70e-20 94.7
Msa0647800 AT4G15233.5 24.800 375 201 15 36 349 81 435 1.09e-18 89.4
Msa0647800 AT4G15233.4 34.254 181 95 7 95 251 737 917 1.70e-20 94.7
Msa0647800 AT4G15233.4 24.800 375 201 15 36 349 81 435 1.09e-18 89.4
Msa0647800 AT1G66950.1 25.965 285 138 9 46 259 182 464 2.00e-20 94.7
Msa0647800 AT1G66950.1 26.776 366 211 15 38 376 880 1215 1.72e-18 88.6
Msa0647800 AT2G37280.3 29.185 233 108 6 95 277 245 470 4.08e-20 93.6
Msa0647800 AT2G37280.3 29.289 239 130 8 34 233 852 1090 3.34e-18 87.8
Msa0647800 AT2G26910.1 31.776 214 124 7 33 224 840 1053 7.00e-20 92.8
Msa0647800 AT2G26910.1 26.056 284 141 10 43 259 143 424 1.55e-18 89.0
Msa0647800 AT2G36380.1 25.263 285 140 9 46 259 180 462 1.96e-19 91.7
Msa0647800 AT2G36380.1 26.974 304 163 10 95 372 940 1210 5.30e-18 87.0

Find 230 sgRNAs with CRISPR-Local

Find 973 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATATTCTCCTGTCAATTT+TGG 0.068625 4_3:-53908673 None:intergenic
AACCTATATATTCTTCTTTC+TGG 0.109191 4_3:-53908982 None:intergenic
AGCTGATCCTTTCATGAATT+TGG 0.110084 4_3:+53905876 Msa0647800:five_prime_UTR
AGCAGATCCTTTCATGAATT+TGG 0.135560 4_3:+53918822 Msa0647800:CDS
TGAATAGATGGGAAGTTAAT+TGG 0.144730 4_3:-53902975 None:intergenic
ATGAAAGGATCTGCTGAATT+TGG 0.146252 4_3:-53918814 None:intergenic
TTATACCTCGATTGCCATTT+TGG 0.165373 4_3:-53918057 None:intergenic
AGAGTTATGTTGCCAAATTT+TGG 0.179448 4_3:+53903266 Msa0647800:five_prime_UTR
GTTGGTCCTTTCCCAAAATT+TGG 0.179855 4_3:-53903278 None:intergenic
GTTGGTCCTTTCCCAAAATT+TGG 0.196264 4_3:-53912886 None:intergenic
GTCATTCCCATGCGGAAATT+TGG 0.199871 4_3:-53906926 None:intergenic
ATGAAAGGATCAGCTGAATT+TGG 0.201169 4_3:-53905868 None:intergenic
AGGTTACTTAATGGGTTAAA+TGG 0.204131 4_3:+53912913 Msa0647800:CDS
ATTAATAGTTTGTATTTAAA+TGG 0.206230 4_3:+53909203 Msa0647800:exon
AGAGTTATGTTGCCAAATTT+TGG 0.218246 4_3:+53912874 Msa0647800:CDS
TTGAGAAAAGACCATCTTTC+AGG 0.218725 4_3:+53908866 Msa0647800:five_prime_UTR
TGGAGTAGCGGCATGTATTT+TGG 0.242283 4_3:+53906727 Msa0647800:five_prime_UTR
AGGTTGCTTAATGGACTAAA+TGG 0.247817 4_3:+53903305 Msa0647800:five_prime_UTR
TTATACTTCTATTGCCGTTT+TGG 0.248988 4_3:-53905150 None:intergenic
TAAGCCGCTGATTTCTTCTT+TGG 0.253209 4_3:-53904799 None:intergenic
TCCACGTTACTCTTTGAATT+TGG 0.254007 4_3:+53903005 Msa0647800:five_prime_UTR
TATGCTGTTGACTTCTTCTT+TGG 0.258775 4_3:-53917706 None:intergenic
AACACTAATTGATAGTTAAT+TGG 0.269187 4_3:+53903031 Msa0647800:five_prime_UTR
CAATGCTAGTTGAGAGATTT+AGG 0.269926 4_3:+53905917 Msa0647800:five_prime_UTR
TGGTAGAATCATGGCTATTA+TGG 0.271739 4_3:+53903340 Msa0647800:five_prime_UTR
CCATAACTGATATATGAAAT+TGG 0.278180 4_3:-53907128 None:intergenic
CCAACCAAAAGGTTACTTAA+TGG 0.279783 4_3:+53912904 Msa0647800:CDS
GGTGGAGAAACTGTTTATTT+TGG 0.281891 4_3:+53905122 Msa0647800:five_prime_UTR
TGATGGCCTCTGGATTCTTT+AGG 0.291223 4_3:+53907069 Msa0647800:five_prime_UTR
GAAAGGCTCAATGGATATTA+TGG 0.293040 4_3:+53906707 Msa0647800:five_prime_UTR
TATTTCATCATTCCCATTCC+TGG 0.297335 4_3:+53919647 Msa0647800:CDS
CAACCAAAAGGTTACTTAAT+GGG 0.301054 4_3:+53912905 Msa0647800:CDS
CTTGAAACTGAGAGAAAATA+TGG 0.301749 4_3:+53906147 Msa0647800:five_prime_UTR
CCAACTAAAAGGTTGCTTAA+TGG 0.302201 4_3:+53903296 Msa0647800:five_prime_UTR
CGATGGAACAATCATAGAAA+TGG 0.316275 4_3:+53917731 Msa0647800:CDS
TTACTTTGGTGAAGCCAAAA+TGG 0.326705 4_3:+53918043 Msa0647800:CDS
CATGTAACATGGTGAAATTC+AGG 0.330460 4_3:+53906810 Msa0647800:five_prime_UTR
TTGGGAAAGGACCAACTAAA+AGG 0.333669 4_3:+53903285 Msa0647800:five_prime_UTR
TAACCCATTAAGTAACCTTT+TGG 0.336088 4_3:-53912908 None:intergenic
AATCAGAATTGATACATCTT+AGG 0.342718 4_3:-53918248 None:intergenic
ACTTTGCTTGATACACTTGC+AGG 0.353311 4_3:+53903386 Msa0647800:five_prime_UTR
AAATGATCTCCTTGTCAGTA+TGG 0.360533 4_3:-53919164 None:intergenic
ATGTGATAACACACATGTTT+GGG 0.360837 4_3:+53908692 Msa0647800:five_prime_UTR
GCCTGTGGTGCATTTGTAAC+AGG 0.363560 4_3:+53919313 Msa0647800:CDS
CCAATTTCATATATCAGTTA+TGG 0.364396 4_3:+53907128 Msa0647800:five_prime_UTR
GGATAGCGCCAAACCGGCTT+TGG 0.366357 4_3:-53907107 None:intergenic
GAATAGATGGGAAGTTAATT+GGG 0.371114 4_3:-53902974 None:intergenic
CTGATCTTCCAAAGCCGGTT+TGG 0.381706 4_3:+53907099 Msa0647800:five_prime_UTR
TCTTCTTTGGACATTGTTGA+TGG 0.385059 4_3:-53917693 None:intergenic
CTTGAAACTGAGATAAACTA+TGG 0.385212 4_3:+53919112 Msa0647800:CDS
GACTGTGCAGATAGGCTAAT+AGG 0.388681 4_3:+53904855 Msa0647800:five_prime_UTR
TTTGGGTCACCCGGGATTAG+TGG 0.393456 4_3:-53908655 None:intergenic
CAGATAGGTTAATAGGTAAC+TGG 0.395360 4_3:+53917769 Msa0647800:intron
TAGTTATAATTATATTCTGC+TGG 0.397252 4_3:+53909008 Msa0647800:five_prime_UTR
TTTATGACTACCATCTCAAT+TGG 0.398486 4_3:+53919337 Msa0647800:CDS
TATGTGATAACACACATGTT+TGG 0.400750 4_3:+53908691 Msa0647800:five_prime_UTR
TGAAAAGATTGTGAATGAAT+TGG 0.401376 4_3:-53908920 None:intergenic
AATAAAGTTTGCTAAAATAT+AGG 0.405971 4_3:-53919628 None:intergenic
TGGAAAGCCTCCAATTGATA+TGG 0.406763 4_3:-53906439 None:intergenic
CAGATAGGCTAATAGGTAAC+TGG 0.413704 4_3:+53904862 Msa0647800:five_prime_UTR
TCTTCTTTGGACATTGTTGA+TGG 0.414148 4_3:-53904786 None:intergenic
ATCATTATATCTATAGGTAT+TGG 0.414782 4_3:+53906327 Msa0647800:five_prime_UTR
ATGGCTATTATGGGTCCTTC+TGG 0.416172 4_3:+53903350 Msa0647800:five_prime_UTR
TTCAAATCAACATAACAATA+TGG 0.417547 4_3:+53903130 Msa0647800:five_prime_UTR
GCATAAAGTGTTTGAAAGAA+TGG 0.424643 4_3:-53908823 None:intergenic
ATTATGGGTCCTTCTGGCTC+TGG 0.429652 4_3:+53903356 Msa0647800:five_prime_UTR
GGTAGAATCATGGCTATTAT+GGG 0.431697 4_3:+53903341 Msa0647800:five_prime_UTR
GTTGTAACGGCTATACTAAA+GGG 0.436151 4_3:+53918276 Msa0647800:CDS
TCCTGCTATAAATGCACTAC+AGG 0.437535 4_3:-53906403 None:intergenic
ACACAAGAAGATGTGTTGTT+AGG 0.439279 4_3:+53917621 Msa0647800:CDS
CATTATTATTCTCAAGTTCA+AGG 0.440209 4_3:+53908789 Msa0647800:five_prime_UTR
ATGATGACCACCATATCAAT+TGG 0.443303 4_3:+53906429 Msa0647800:five_prime_UTR
CATTCCAAGTGGTGGGACTT+AGG 0.445232 4_3:+53908727 Msa0647800:five_prime_UTR
GAAATCAGCGGCTTAGTTGA+TGG 0.452600 4_3:+53904807 Msa0647800:five_prime_UTR
CTATAGCTATACTTCCATCT+TGG 0.453980 4_3:+53906371 Msa0647800:five_prime_UTR
TTATCATTATCATATGCTAC+AGG 0.455569 4_3:+53908758 Msa0647800:five_prime_UTR
ACACAAGAAGATGTGTTGTT+AGG 0.456806 4_3:+53904714 Msa0647800:five_prime_UTR
ACGGGAAATGTTCTTCTCAA+TGG 0.461115 4_3:+53916530 Msa0647800:CDS
TCATACAAGAATGACTTACT+AGG 0.461192 4_3:+53908619 Msa0647800:five_prime_UTR
GTCTACATCATTATATCTAT+AGG 0.464985 4_3:+53906321 Msa0647800:five_prime_UTR
ACAGGCACCGCGAGCCAAGA+TGG 0.466103 4_3:-53919296 None:intergenic
CAGGAAATGTTCTTCGCAAT+GGG 0.466350 4_3:+53904441 Msa0647800:five_prime_UTR
TGAGTTTGATCCACTAATCC+CGG 0.467425 4_3:+53908645 Msa0647800:five_prime_UTR
GATGGAACAATCATAGAAAT+GGG 0.471258 4_3:+53917732 Msa0647800:CDS
TGGTAGAATCATGGCTATCA+TGG 0.474736 4_3:+53912948 Msa0647800:CDS
CGTGGAGAAACTGTTTACTT+TGG 0.475445 4_3:+53918029 Msa0647800:CDS
TGCTGAGCCTGGTAGAATCA+TGG 0.476639 4_3:+53903331 Msa0647800:five_prime_UTR
TGCTGAGCCTGGTAGAATCA+TGG 0.476639 4_3:+53912939 Msa0647800:CDS
AGTGCAAAGACTTCACTGTT+AGG 0.477345 4_3:-53917981 None:intergenic
TGATGGAACAATCATTGAAA+CGG 0.480419 4_3:+53904824 Msa0647800:five_prime_UTR
ACCTGTAGTGCATTTATAGC+AGG 0.480703 4_3:+53906402 Msa0647800:five_prime_UTR
TATTGTGGTCTTATTAATAG+AGG 0.482884 4_3:+53903218 Msa0647800:five_prime_UTR
CATATATCAGTTATGGCGCA+TGG 0.483609 4_3:+53907135 Msa0647800:five_prime_UTR
TCTGGTTGTTCTTCTAGTAG+TGG 0.485101 4_3:-53908964 None:intergenic
AACACATAGTGCATGAATCC+TGG 0.485334 4_3:-53906833 None:intergenic
TATAAGAAGGAAATCTAGAA+TGG 0.486314 4_3:-53903068 None:intergenic
GAAATTGGATAGCGCCAAAC+CGG 0.491200 4_3:-53907113 None:intergenic
TGTTGTAACGGCTATACTAA+AGG 0.492144 4_3:+53918275 Msa0647800:CDS
TACCTTCATTTCTTCAATGA+CGG 0.492511 4_3:-53919371 None:intergenic
GGAATCATGATGATGGCCTC+TGG 0.493246 4_3:+53907059 Msa0647800:five_prime_UTR
GAGCAATAACAACCAGGAAT+GGG 0.494481 4_3:-53919659 None:intergenic
CTCAGAAATATCGCTCATGA+TGG 0.494615 4_3:+53917930 Msa0647800:CDS
ATTGCTTCCACCAACTAGCT+TGG 0.494813 4_3:-53919138 None:intergenic
GCTATCTGATCTTCCAAAGC+CGG 0.495982 4_3:+53907094 Msa0647800:five_prime_UTR
TTAGCCTATCTGCACAGTCT+TGG 0.496010 4_3:-53904851 None:intergenic
AACCAGAAAGAAGAATATAT+AGG 0.496013 4_3:+53908980 Msa0647800:five_prime_UTR
GCATATTGTGGTCTTAATAG+AGG 0.499807 4_3:+53912826 Msa0647800:CDS
GATGGAACAATCATTGAAAC+GGG 0.500341 4_3:+53904825 Msa0647800:five_prime_UTR
CTTGTTCCAAATTTCCGCAT+GGG 0.503038 4_3:+53906920 Msa0647800:five_prime_UTR
TTCATTTCTTCAATGACGGA+TGG 0.503133 4_3:-53906459 None:intergenic
TTATGGCGCATGGGCAATGC+AGG 0.503889 4_3:+53907145 Msa0647800:five_prime_UTR
ATGTTGGTTACTACTGGTTG+CGG 0.504179 4_3:+53906292 Msa0647800:five_prime_UTR
AGAGCAATAACAACCAGGAA+TGG 0.504365 4_3:-53919660 None:intergenic
TTCTGATTTCGATGTTGTAA+CGG 0.505303 4_3:+53918263 Msa0647800:CDS
TACCTTCATTTCTTCAATGA+CGG 0.506495 4_3:-53906463 None:intergenic
CTCCACGAGCGAGCAAGAAA+AGG 0.507213 4_3:-53918013 None:intergenic
GTGAACATGTGTAGAGATGT+TGG 0.507536 4_3:+53906276 Msa0647800:five_prime_UTR
GTTGCTTCCACCAACTAGCT+TGG 0.510437 4_3:-53906173 None:intergenic
GAGGTATAAGCGGCGGCGAA+AGG 0.510571 4_3:+53904892 Msa0647800:five_prime_UTR
GAGGTATAAGCGGCGGCGAA+AGG 0.510571 4_3:+53917799 Msa0647800:CDS
ACAGGAAATGTTCTTCGCAA+TGG 0.510695 4_3:+53904440 Msa0647800:five_prime_UTR
CTTACAACAAAACCATAGTT+CGG 0.511900 4_3:-53916566 None:intergenic
AAAGCTTAAAAGATATAAGA+AGG 0.514944 4_3:-53903081 None:intergenic
ATCCGTCATTGAAGAAATGA+AGG 0.515927 4_3:+53906461 Msa0647800:five_prime_UTR
ATCTTGGCTCGCGGTGCCTG+TGG 0.518293 4_3:+53919298 Msa0647800:CDS
TTGGGAAAGGACCAACCAAA+AGG 0.519160 4_3:+53912893 Msa0647800:CDS
GGATTTCTATTACGCGGACA+AGG 0.527299 4_3:-53918213 None:intergenic
CTCCACCAGAAAGCAAGAAA+AGG 0.527833 4_3:-53905106 None:intergenic
ATGGAAGCCAAGCTAGTTGG+TGG 0.528421 4_3:+53919131 Msa0647800:CDS
GTAGAGATGTTGGTTACTAC+TGG 0.528656 4_3:+53906286 Msa0647800:five_prime_UTR
AGCACCTAAGTCCCACCACT+TGG 0.529804 4_3:-53908731 None:intergenic
TTGTTCTTCTAGTAGTGGAA+TGG 0.530044 4_3:-53908959 None:intergenic
ATCCGTCATTGAAGAAATGA+AGG 0.530881 4_3:+53919369 Msa0647800:CDS
ATGGAAGCCAAGCTAGTTGG+TGG 0.532131 4_3:+53906166 Msa0647800:five_prime_UTR
CATTGCATCAGCTACACTAA+AGG 0.533838 4_3:+53905366 Msa0647800:five_prime_UTR
CTAAGTCCCACCACTTGGAA+TGG 0.534095 4_3:-53908726 None:intergenic
TATAATCACGAAAGGCTCAA+TGG 0.535052 4_3:+53906698 Msa0647800:five_prime_UTR
AATATGGAAGCCAAGCTAGT+TGG 0.535566 4_3:+53906163 Msa0647800:five_prime_UTR
GCGTTCAACGTATGCAAGTA+GGG 0.538448 4_3:+53918885 Msa0647800:CDS
CTATAGCTATACCTCCATCT+TGG 0.538919 4_3:+53919282 Msa0647800:intron
GAATGAATTGGTTGATGCCT+AGG 0.541219 4_3:-53908908 None:intergenic
GGCGTTCCACGTATGCCAGA+AGG 0.543975 4_3:+53905938 Msa0647800:five_prime_UTR
ACAGGTGCCACGAGCCAAGA+TGG 0.544121 4_3:-53906385 None:intergenic
CATCTTAGAAAGTGATCAGA+AGG 0.544627 4_3:-53905325 None:intergenic
TCCTGTTACAAATGCACCAC+AGG 0.545400 4_3:-53919314 None:intergenic
TGTTAGCTTATGTATAGAGA+AGG 0.545508 4_3:+53909095 Msa0647800:five_prime_UTR
TTCATTTCTTCAATGACGGA+TGG 0.545681 4_3:-53919367 None:intergenic
CATACAAGAATGACTTACTA+GGG 0.545870 4_3:+53908620 Msa0647800:five_prime_UTR
CCGGGTGACCCAAAATTGAC+AGG 0.547045 4_3:+53908664 Msa0647800:five_prime_UTR
ACTATGGAAGCCAAGCTAGT+TGG 0.547387 4_3:+53919128 Msa0647800:CDS
AGTGCAAAGACTTCACTACT+TGG 0.554320 4_3:-53905074 None:intergenic
TGCAATGTCGAAATCAGTAT+TGG 0.555910 4_3:-53905350 None:intergenic
TAGAGGAAGCTTCTTAGCAT+GGG 0.556492 4_3:+53903235 Msa0647800:five_prime_UTR
AATTAAGCCATTCCAAGTGG+TGG 0.556493 4_3:+53908719 Msa0647800:five_prime_UTR
ATAGAGGAAGCTTCTTAGCA+TGG 0.556626 4_3:+53903234 Msa0647800:five_prime_UTR
CTTACAACAAAACCATAGCC+TGG 0.557488 4_3:-53904476 None:intergenic
GTCTCCAAGACTGTGCAGAT+AGG 0.560106 4_3:+53904847 Msa0647800:five_prime_UTR
TTGAGATTCTCACAAAGCCT+CGG 0.561814 4_3:+53904934 Msa0647800:five_prime_UTR
ATTTACTGAAAATAACATTG+AGG 0.562671 4_3:+53909147 Msa0647800:five_prime_UTR
GAGTTTGATCCACTAATCCC+GGG 0.563700 4_3:+53908646 Msa0647800:five_prime_UTR
GAAGTCTCGCTCGTGATGGA+AGG 0.564375 4_3:+53905027 Msa0647800:five_prime_UTR
GATGCCTAGGAAGGAAAAGA+TGG 0.569033 4_3:-53908895 None:intergenic
TTTCTTGATGAACCAACCTG+TGG 0.569399 4_3:+53917870 Msa0647800:CDS
CATCTTAGGAAGTGATCAGA+AGG 0.576953 4_3:-53918234 None:intergenic
AGCGTTCAACGTATGCAAGT+AGG 0.578216 4_3:+53918884 Msa0647800:CDS
GGTAGAATCATGGCTATCAT+GGG 0.580289 4_3:+53912949 Msa0647800:CDS
ATATATCAGTTATGGCGCAT+GGG 0.584804 4_3:+53907136 Msa0647800:five_prime_UTR
TTTCTTGATGAACCAACTAG+TGG 0.585175 4_3:+53904963 Msa0647800:five_prime_UTR
ATGGGAATGACGATAGGAGC+TGG 0.585963 4_3:+53906938 Msa0647800:five_prime_UTR
TGCAAGTGTATCAAGCAAAG+TGG 0.586411 4_3:-53903384 None:intergenic
GAAATATCGCTCATGATGGA+AGG 0.589152 4_3:+53917934 Msa0647800:CDS
GAAAGGATGAATGGATACTA+CGG 0.590928 4_3:+53919597 Msa0647800:CDS
ATTAAGCCATTCCAAGTGGT+GGG 0.591525 4_3:+53908720 Msa0647800:five_prime_UTR
GCACTGTCTAAGCCACTAGT+TGG 0.591553 4_3:-53904975 None:intergenic
CTTAGAAGTCTCGCTCGTGA+TGG 0.591770 4_3:+53905023 Msa0647800:five_prime_UTR
GCACTATCTAAGCCACAGGT+TGG 0.591952 4_3:-53917882 None:intergenic
ATGACCACCATATCAATTGG+AGG 0.592412 4_3:+53906432 Msa0647800:five_prime_UTR
AACAGGTTTATAATCACGAA+AGG 0.596628 4_3:+53906690 Msa0647800:intron
ACTTGTTCCAAATTTCCGCA+TGG 0.597316 4_3:+53906919 Msa0647800:five_prime_UTR
AACATGGTGAAATTCAGGCC+AGG 0.597364 4_3:+53906815 Msa0647800:five_prime_UTR
AGGCTGGTTTCCCTTGTCCG+CGG 0.598481 4_3:+53905293 Msa0647800:five_prime_UTR
GAATTGGTTGATGCCTAGGA+AGG 0.601872 4_3:-53908904 None:intergenic
GAAGTCAACAGCATAATCGA+TGG 0.602185 4_3:+53917714 Msa0647800:CDS
GCGTTCCACGTATGCCAGAA+GGG 0.602784 4_3:+53905939 Msa0647800:five_prime_UTR
ATGATAGCCATGATTCTACC+AGG 0.610860 4_3:-53912946 None:intergenic
ATAGGTAACTGGCATTTGAG+AGG 0.611647 4_3:+53917780 Msa0647800:intron
GCTGTAGCCAAATTCATGAA+AGG 0.611893 4_3:-53905883 None:intergenic
TGGCAAGCTTCCAATTGAGA+TGG 0.613744 4_3:-53919347 None:intergenic
AGAAGCACTATCTAAGCCAC+AGG 0.615692 4_3:-53917886 None:intergenic
AGCAACTGTCCACACTGACA+AGG 0.619962 4_3:+53906190 Msa0647800:five_prime_UTR
AGTGATGAGGAAGCATATTG+TGG 0.621490 4_3:+53903203 Msa0647800:five_prime_UTR
ATAATAGCCATGATTCTACC+AGG 0.623399 4_3:-53903338 None:intergenic
GATTTCTATTACGCGGACAA+GGG 0.627113 4_3:-53918212 None:intergenic
ATAGGTAACTGGCATTTGAG+AGG 0.628943 4_3:+53904873 Msa0647800:five_prime_UTR
TTCCGCATGGGAATGACGAT+AGG 0.630697 4_3:+53906932 Msa0647800:five_prime_UTR
GCTGTAGCCAAATTCATGAA+AGG 0.631949 4_3:-53918829 None:intergenic
AGTGATCGAGAGTATCATGA+TGG 0.632091 4_3:+53906886 Msa0647800:five_prime_UTR
CTACACTAAAGGTATCTCAA+AGG 0.632928 4_3:+53905377 Msa0647800:five_prime_UTR
AGCGAGGATGAAGCATATTG+TGG 0.633207 4_3:+53912814 Msa0647800:CDS
ATGCAACATGGACGAGAGCG+AGG 0.634194 4_3:+53912798 Msa0647800:CDS
AAAGCCTCCAATTGATATGG+TGG 0.635435 4_3:-53906436 None:intergenic
CAACAACAAAGGATGCAACA+TGG 0.635595 4_3:+53903175 Msa0647800:five_prime_UTR
CAACAACAAAGGATGCAACA+TGG 0.635595 4_3:+53912786 Msa0647800:CDS
CAACATGGACGAGAGTGATG+AGG 0.639956 4_3:+53903190 Msa0647800:five_prime_UTR
ATATGATCTCCTTGTCAGTG+TGG 0.642403 4_3:-53906199 None:intergenic
TTGAATTAAGCCATTCCAAG+TGG 0.642469 4_3:+53908716 Msa0647800:five_prime_UTR
TTGTAACGGCTATACTAAAG+GGG 0.642723 4_3:+53918277 Msa0647800:CDS
TATGCAGGGAATCATGATGA+TGG 0.643276 4_3:+53907052 Msa0647800:intron
TATACTTCCATCTTGGCTCG+TGG 0.649799 4_3:+53906378 Msa0647800:five_prime_UTR
TTGCACAATCACATGTAACA+TGG 0.650316 4_3:+53906799 Msa0647800:five_prime_UTR
TGAAGCCAAAATGGCAATCG+AGG 0.652339 4_3:+53918052 Msa0647800:CDS
TCATCAAGAAACAGCAACCG+AGG 0.658851 4_3:-53904951 None:intergenic
ATGGAGATTGAAGCAGCAAG+TGG 0.659585 4_3:+53903149 Msa0647800:five_prime_UTR
CAATGGATATTATGGAGTAG+CGG 0.664915 4_3:+53906715 Msa0647800:five_prime_UTR
AAGTCAGAGCAATAACAACC+AGG 0.665737 4_3:-53919665 None:intergenic
ACCAAATTCAAAGAGTAACG+TGG 0.673318 4_3:-53903006 None:intergenic
TGGCATTTGAGAGGTATAAG+CGG 0.679690 4_3:+53904882 Msa0647800:five_prime_UTR
TGGCATTTGAGAGGTATAAG+CGG 0.679690 4_3:+53917789 Msa0647800:CDS
GCAAGTGGTAGCAACAACAA+AGG 0.683774 4_3:+53903164 Msa0647800:five_prime_UTR
AGCAATTCTCCATACTGACA+AGG 0.684622 4_3:+53919155 Msa0647800:CDS
GAGATTGGTAGCAACAACAA+AGG 0.688155 4_3:+53912775 Msa0647800:intron
TATACCTCCATCTTGGCTCG+CGG 0.688569 4_3:+53919289 Msa0647800:CDS
TCAGAAGGATTTCTATTACG+CGG 0.696297 4_3:-53918219 None:intergenic
GGCACCGCGAGCCAAGATGG+AGG 0.699166 4_3:-53919293 None:intergenic
CTCCTATCGTCATTCCCATG+CGG 0.705553 4_3:-53906934 None:intergenic
TAGCAACCTAAAGAATCCAG+AGG 0.708277 4_3:-53907075 None:intergenic
ATGTCCAAAGAAGAAATCAG+CGG 0.710305 4_3:+53904795 Msa0647800:five_prime_UTR
CATTTGAGAGGTATAAGCGG+CGG 0.717725 4_3:+53904885 Msa0647800:five_prime_UTR
CATTTGAGAGGTATAAGCGG+CGG 0.717725 4_3:+53917792 Msa0647800:CDS
TCATCAAGAAACAACAAACG+AGG 0.743768 4_3:-53917858 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAACTAAAATCAATTTTTAT+GGG - chr4_3:53907209-53907228 None:intergenic 10.0%
!!! TTAACTAAAATCAATTTTTA+TGG - chr4_3:53907210-53907229 None:intergenic 10.0%
!!! TATTTTTTTGAAATTGTTAT+TGG + chr4_3:53908438-53908457 Msa0647800:intron 10.0%
!!! ATTAATAGTTTGTATTTAAA+TGG + chr4_3:53909203-53909222 Msa0647800:exon 10.0%
!!! ATTATTTGTTTAATTTGATT+TGG - chr4_3:53911031-53911050 None:intergenic 10.0%
!! CAAATTAAACAAATAATATT+TGG + chr4_3:53911034-53911053 Msa0647800:intron 10.0%
!!! TATTATAATTGATGATATAT+AGG - chr4_3:53913885-53913904 None:intergenic 10.0%
!! ACAATAAAAATATAGAAAAT+AGG + chr4_3:53914026-53914045 Msa0647800:intron 10.0%
!!! TTTTTTTGAACAAATAATAT+AGG - chr4_3:53914578-53914597 None:intergenic 10.0%
!! TATATAAAGTAAAATGTTTA+AGG - chr4_3:53914868-53914887 None:intergenic 10.0%
!!! TAATAAATTGAACTTTTTTT+TGG - chr4_3:53915020-53915039 None:intergenic 10.0%
!!! ATATGTTTTCATTAAAAATA+AGG + chr4_3:53915481-53915500 Msa0647800:intron 10.0%
!! AAAATAGAAAAAATAAAATG+AGG - chr4_3:53916004-53916023 None:intergenic 10.0%
!!! AATTGTTGTTTTTTATAAAA+AGG - chr4_3:53917144-53917163 None:intergenic 10.0%
!!! ATTAATGAATAATTACATTT+TGG + chr4_3:53917515-53917534 Msa0647800:intron 10.0%
!! ATATATAAATATTGTTTCAA+AGG - chr4_3:53918639-53918658 None:intergenic 10.0%
!! TTAACTAAAATTTAAAAGTT+TGG + chr4_3:53918672-53918691 Msa0647800:intron 10.0%
!!! TATTGATAAGGTTTTAAAAA+AGG - chr4_3:53903630-53903649 None:intergenic 15.0%
!!! ATAATTGCTAATTTTGATTT+CGG - chr4_3:53903810-53903829 None:intergenic 15.0%
!!! TTTATTTTTCTTTTTTGAGT+GGG + chr4_3:53903912-53903931 Msa0647800:intron 15.0%
!!! ACTTTTACTTAAACAAATAT+AGG - chr4_3:53904159-53904178 None:intergenic 15.0%
!! AAAAAACAAAAAAGAAACAA+TGG - chr4_3:53904243-53904262 None:intergenic 15.0%
!!! GATTAAAAAAATTTGGATTT+TGG - chr4_3:53904314-53904333 None:intergenic 15.0%
!! TTGTACAGATTAAAAAAATT+TGG - chr4_3:53904321-53904340 None:intergenic 15.0%
!!! TTTCATTATACTCATTTTTT+GGG - chr4_3:53908547-53908566 None:intergenic 15.0%
!!! ATTTCATTATACTCATTTTT+TGG - chr4_3:53908548-53908567 None:intergenic 15.0%
!!! AGATATTATTTGCTTTTATA+TGG + chr4_3:53909038-53909057 Msa0647800:five_prime_UTR 15.0%
!!! ATTTAGTTAGTTCTATTAAT+CGG - chr4_3:53909938-53909957 None:intergenic 15.0%
!! TAAACAAATAATATTTGGTT+TGG + chr4_3:53911039-53911058 Msa0647800:intron 15.0%
!! TCTTAGCAATATATTATTAA+AGG + chr4_3:53911122-53911141 Msa0647800:intron 15.0%
!! TACGTAAGTTAAATATTTAA+AGG - chr4_3:53911179-53911198 None:intergenic 15.0%
!!! TTTGAAATATTAATAGAATC+GGG - chr4_3:53911983-53912002 None:intergenic 15.0%
!!! GTTTGAAATATTAATAGAAT+CGG - chr4_3:53911984-53912003 None:intergenic 15.0%
!! ATATTTATATTATACTTGTG+TGG + chr4_3:53912472-53912491 Msa0647800:intron 15.0%
!! AAATAAGCTTAAAAGATATA+AGG - chr4_3:53912675-53912694 None:intergenic 15.0%
!! AAAAACATGTTGAAATATTT+CGG + chr4_3:53913138-53913157 Msa0647800:intron 15.0%
!! ATAATAGAAGAAAAAAATGT+AGG - chr4_3:53913743-53913762 None:intergenic 15.0%
!!! ATTTAGTAGTAAGAATTTTT+TGG - chr4_3:53914484-53914503 None:intergenic 15.0%
!!! CATTTTCCTATTTTTTTTTT+TGG + chr4_3:53914539-53914558 Msa0647800:intron 15.0%
!! TTAAAAATTGAACTTAGATT+TGG + chr4_3:53914635-53914654 Msa0647800:intron 15.0%
!!! ATTTCTTTTTAAAATCGAAA+GGG - chr4_3:53915083-53915102 None:intergenic 15.0%
!!! AATTTCTTTTTAAAATCGAA+AGG - chr4_3:53915084-53915103 None:intergenic 15.0%
!!! TTTGGAATTTTTATCTTTTT+TGG - chr4_3:53915222-53915241 None:intergenic 15.0%
!!! AAATGAAACACATTATTTTT+TGG + chr4_3:53915839-53915858 Msa0647800:intron 15.0%
!!! TAATGTTTTTTTGTTACAAA+AGG - chr4_3:53916147-53916166 None:intergenic 15.0%
!! ATATATATATAAAGAAACGA+CGG + chr4_3:53916234-53916253 Msa0647800:intron 15.0%
!! CAAAAAAAATAATTACCAAA+TGG - chr4_3:53916426-53916445 None:intergenic 15.0%
!! AAATAAAAAGAATGATACAA+AGG + chr4_3:53916901-53916920 Msa0647800:intron 15.0%
!!! GATTTTAATATTATTGGAAT+AGG - chr4_3:53917372-53917391 None:intergenic 15.0%
!!! TATATAAGATTTTTCTACAA+TGG - chr4_3:53918600-53918619 None:intergenic 15.0%
!!! AATAAAGTTTGCTAAAATAT+AGG - chr4_3:53919631-53919650 None:intergenic 15.0%
!! TGGAAAAATTATGAATAGAT+GGG - chr4_3:53902989-53903008 None:intergenic 20.0%
!!! AACACTAATTGATAGTTAAT+TGG + chr4_3:53903031-53903050 Msa0647800:five_prime_UTR 20.0%
!! AAAGCTTAAAAGATATAAGA+AGG - chr4_3:53903084-53903103 None:intergenic 20.0%
!! TTCAAATCAACATAACAATA+TGG + chr4_3:53903130-53903149 Msa0647800:five_prime_UTR 20.0%
!!! ATAAGGTTTTAAAAAAGGAA+TGG - chr4_3:53903625-53903644 None:intergenic 20.0%
!!! ATTGTGCGTTTTTTTTATTA+GGG - chr4_3:53903724-53903743 None:intergenic 20.0%
!!! AATTGTGCGTTTTTTTTATT+AGG - chr4_3:53903725-53903744 None:intergenic 20.0%
!!! GTTTATTTTTCTTTTTTGAG+TGG + chr4_3:53903911-53903930 Msa0647800:intron 20.0%
!! TTCAAATTAGAACTTACAAA+AGG - chr4_3:53905784-53905803 None:intergenic 20.0%
!!! GTTCTAATTTGAATTTTTTG+TGG + chr4_3:53905791-53905810 Msa0647800:intron 20.0%
!! ATCATTATATCTATAGGTAT+TGG + chr4_3:53906327-53906346 Msa0647800:five_prime_UTR 20.0%
!!! TCAAATTTTCATCATTACTT+TGG + chr4_3:53906548-53906567 Msa0647800:intron 20.0%
!!! TTTTTCACTCTTAACTTTTA+CGG + chr4_3:53906854-53906873 Msa0647800:five_prime_UTR 20.0%
!! AAACGGACATTTAATATTAA+CGG - chr4_3:53907177-53907196 None:intergenic 20.0%
!! AATGTAAAGTGACTTATATT+TGG + chr4_3:53907240-53907259 Msa0647800:intron 20.0%
!! ATGTAAAGTGACTTATATTT+GGG + chr4_3:53907241-53907260 Msa0647800:intron 20.0%
!!! GAGGTTTTTTAAAAAAAGTA+AGG + chr4_3:53907710-53907729 Msa0647800:intron 20.0%
!! ACTTATATAATCATTGTCTT+AGG - chr4_3:53908030-53908049 None:intergenic 20.0%
!!! AATGTCTTATCTTTTTAATG+TGG - chr4_3:53908128-53908147 None:intergenic 20.0%
!! TATATATATTGATGTTGTCT+TGG - chr4_3:53908401-53908420 None:intergenic 20.0%
!!! TAGTAGTTTTTCATAGTTTA+TGG + chr4_3:53908504-53908523 Msa0647800:intron 20.0%
!! GAATGATTGGATAATTAATT+TGG + chr4_3:53908587-53908606 Msa0647800:intron 20.0%
!! TAGTTATAATTATATTCTGC+TGG + chr4_3:53909008-53909027 Msa0647800:five_prime_UTR 20.0%
!! ATTTACTGAAAATAACATTG+AGG + chr4_3:53909147-53909166 Msa0647800:five_prime_UTR 20.0%
!! TTGTATTTAAATGGTAATTG+TGG + chr4_3:53909212-53909231 Msa0647800:intron 20.0%
!!! CAATTTTAGCTAATTCTATT+GGG - chr4_3:53909504-53909523 None:intergenic 20.0%
!!! ACAATTTTAGCTAATTCTAT+TGG - chr4_3:53909505-53909524 None:intergenic 20.0%
!!! TAAAATTGTTTTCTAGAGAT+TGG + chr4_3:53909516-53909535 Msa0647800:intron 20.0%
!! AAAAGAACATTCGATATTAA+TGG - chr4_3:53909684-53909703 None:intergenic 20.0%
!!! CTCTTTTTATAATCAAAGTA+TGG - chr4_3:53909906-53909925 None:intergenic 20.0%
!!! TAATTGTGTTGGAATTTTTA+TGG - chr4_3:53910220-53910239 None:intergenic 20.0%
!! TTGAGATATAATAATTGTGT+TGG - chr4_3:53910231-53910250 None:intergenic 20.0%
!! ACAATTATTATATCTCAAAC+CGG + chr4_3:53910233-53910252 Msa0647800:intron 20.0%
!! TCAAATTTCATAATTGATCA+TGG - chr4_3:53910356-53910375 None:intergenic 20.0%
!!! ATTATTTCTTTACTAGAGAT+TGG + chr4_3:53910457-53910476 Msa0647800:intron 20.0%
!!! TTTCGTAATTATTTTTCTCA+TGG + chr4_3:53910909-53910928 Msa0647800:intron 20.0%
!!! TTCGTAATTATTTTTCTCAT+GGG + chr4_3:53910910-53910929 Msa0647800:intron 20.0%
!!! AAATAATATTTGGTTTGGAT+TGG + chr4_3:53911044-53911063 Msa0647800:intron 20.0%
!!! ACATTTCTCAATTTTTATGT+GGG - chr4_3:53911325-53911344 None:intergenic 20.0%
!! AACTATGTACAAATATTTGT+TGG + chr4_3:53911370-53911389 Msa0647800:intron 20.0%
!! TTTCGATTGAAAATTTGATT+TGG + chr4_3:53911483-53911502 Msa0647800:intron 20.0%
!! TATTTGTTCATATTCTAGAT+AGG - chr4_3:53911765-53911784 None:intergenic 20.0%
!! TTGAAATATTAATAGAATCG+GGG - chr4_3:53911982-53912001 None:intergenic 20.0%
!! TTGTTAAAAGTTTCTCAATT+AGG + chr4_3:53912016-53912035 Msa0647800:intron 20.0%
!!! AACATTAATTGATAGCTTAT+TGG + chr4_3:53912620-53912639 Msa0647800:intron 20.0%
!!! GACTTGTTTATTATTATGAA+GGG - chr4_3:53912717-53912736 None:intergenic 20.0%
!!! TGACTTGTTTATTATTATGA+AGG - chr4_3:53912718-53912737 None:intergenic 20.0%
!! AAATCAACATAAACATAACA+TGG + chr4_3:53912753-53912772 Msa0647800:intron 20.0%
!!! ACATGTTTTTTGATGTTTTA+TGG - chr4_3:53913128-53913147 None:intergenic 20.0%
!!! TTTACAATTTTGACATTGTT+GGG - chr4_3:53913607-53913626 None:intergenic 20.0%
!!! ATTTACAATTTTGACATTGT+TGG - chr4_3:53913608-53913627 None:intergenic 20.0%
!!! TGCATATAGGATTTTTTTTA+GGG - chr4_3:53913841-53913860 None:intergenic 20.0%
!! GTAAAATTAAAAAGTTGAGA+AGG + chr4_3:53914050-53914069 Msa0647800:intron 20.0%
!! AATTGAATAAGAGAAATACT+TGG - chr4_3:53914182-53914201 None:intergenic 20.0%
!! AAGTATTTCTCTTATTCAAT+TGG + chr4_3:53914181-53914200 Msa0647800:intron 20.0%
!!! TACTGAGCTATAATTTTTTT+AGG - chr4_3:53914268-53914287 None:intergenic 20.0%
!!! GTTTTAGGATTATTCAAATT+AGG + chr4_3:53914347-53914366 Msa0647800:intron 20.0%
!! TCATTCAAAGAGAATATAAA+GGG + chr4_3:53914396-53914415 Msa0647800:intron 20.0%
!! TTCACACCAAAAAAAAAAAT+AGG - chr4_3:53914548-53914567 None:intergenic 20.0%
!!! AATTTTGAGAATGACTTATT+TGG - chr4_3:53915240-53915259 None:intergenic 20.0%
!! TTTAGTTAAAGATCTATTAG+AGG + chr4_3:53915301-53915320 Msa0647800:intron 20.0%
!! TCTTTCTACTTCAAAAAAAT+TGG - chr4_3:53915820-53915839 None:intergenic 20.0%
!! TATAGATAGAAAAATGTTGT+GGG - chr4_3:53915920-53915939 None:intergenic 20.0%
!! ATAGATAAACTAATTAAGAG+AGG - chr4_3:53915970-53915989 None:intergenic 20.0%
!!! TTTTTTTGTTACAAAAGGTT+TGG - chr4_3:53916142-53916161 None:intergenic 20.0%
!!! TCCTCACTTATTTATTTTAA+AGG + chr4_3:53916316-53916335 Msa0647800:intron 20.0%
!!! TCCTTTAAAATAAATAAGTG+AGG - chr4_3:53916320-53916339 None:intergenic 20.0%
!! CAATTAAGTTATTATGGTTT+GGG - chr4_3:53916950-53916969 None:intergenic 20.0%
!! ACAATTAAGTTATTATGGTT+TGG - chr4_3:53916951-53916970 None:intergenic 20.0%
!! GTTACACAATTAAGTTATTA+TGG - chr4_3:53916956-53916975 None:intergenic 20.0%
!!! GGAGTTGATTTTAATATTAT+TGG - chr4_3:53917378-53917397 None:intergenic 20.0%
!! TTATTATATCTTATATGGAC+AGG + chr4_3:53918084-53918103 Msa0647800:intron 20.0%
!! ATTTATAATCATATGCTTTG+AGG + chr4_3:53918339-53918358 Msa0647800:intron 20.0%
!! TAATCTGAACTAACTTATAA+TGG - chr4_3:53918463-53918482 None:intergenic 20.0%
!! ATCAAATTAGATCTTAGAAA+GGG - chr4_3:53918731-53918750 None:intergenic 20.0%
!! AATCAAATTAGATCTTAGAA+AGG - chr4_3:53918732-53918751 None:intergenic 20.0%
!! ATGATAAATGTATTACAGAA+AGG + chr4_3:53919088-53919107 Msa0647800:intron 20.0%
!! TGATAAATGTATTACAGAAA+GGG + chr4_3:53919089-53919108 Msa0647800:intron 20.0%
!!! TAAGTACTTGTGTAAATTTT+TGG + chr4_3:53919494-53919513 Msa0647800:intron 20.0%
! GTGGAAAAATTATGAATAGA+TGG - chr4_3:53902990-53903009 None:intergenic 25.0%
! TATAAGAAGGAAATCTAGAA+TGG - chr4_3:53903071-53903090 None:intergenic 25.0%
!!! TATTGTGGTCTTATTAATAG+AGG + chr4_3:53903218-53903237 Msa0647800:five_prime_UTR 25.0%
! ACAAACAAAGAAACATACAT+AGG - chr4_3:53903453-53903472 None:intergenic 25.0%
!!! GAGCAATAATTTTTTTCTTG+AGG + chr4_3:53903947-53903966 Msa0647800:intron 25.0%
!! AGTAAACATAGTAGAAGTAT+TGG - chr4_3:53904184-53904203 None:intergenic 25.0%
!!! TTCCTTTTGTTATGAAGTTT+TGG + chr4_3:53904360-53904379 Msa0647800:intron 25.0%
! TACCAAAACTTCATAACAAA+AGG - chr4_3:53904365-53904384 None:intergenic 25.0%
!!! TTTAGTAGTTCTAACCATAT+AGG + chr4_3:53905416-53905435 Msa0647800:intron 25.0%
!! ATTTGAAATAGCTCATGATA+TGG + chr4_3:53905494-53905513 Msa0647800:intron 25.0%
! TTCTCTTGCAATTAAAAGTA+TGG + chr4_3:53905717-53905736 Msa0647800:intron 25.0%
!!! CTTTCACTTTTTCTCTTAAT+AGG + chr4_3:53905840-53905859 Msa0647800:intron 25.0%
! CGACACTAAAAAATATCTTA+TGG - chr4_3:53906054-53906073 None:intergenic 25.0%
! TGATAAATGTATTACAGGAA+GGG + chr4_3:53906124-53906143 Msa0647800:intron 25.0%
! GTCTACATCATTATATCTAT+AGG + chr4_3:53906321-53906340 Msa0647800:five_prime_UTR 25.0%
! CCATAACTGATATATGAAAT+TGG - chr4_3:53907131-53907150 None:intergenic 25.0%
! CCAATTTCATATATCAGTTA+TGG + chr4_3:53907128-53907147 Msa0647800:five_prime_UTR 25.0%
! GTTAATATTAAATGTCCGTT+TGG + chr4_3:53907176-53907195 Msa0647800:intron 25.0%
! TGGGTTCAATAATAAATTTG+AGG + chr4_3:53907280-53907299 Msa0647800:intron 25.0%
! CAAACATATACTAACTGATT+CGG + chr4_3:53907406-53907425 Msa0647800:intron 25.0%
!! AAACATATACTAACTGATTC+GGG + chr4_3:53907407-53907426 Msa0647800:intron 25.0%
! TAAAAAAAGTAAGGAAGAAG+TGG + chr4_3:53907719-53907738 Msa0647800:intron 25.0%
!!! TTTTTGAGTTCCACAAATTA+GGG - chr4_3:53907809-53907828 None:intergenic 25.0%
!!! ATTTTTGAGTTCCACAAATT+AGG - chr4_3:53907810-53907829 None:intergenic 25.0%
! TAGACAGTAATAACATAGAT+TGG - chr4_3:53907878-53907897 None:intergenic 25.0%
!!! TTGAGTTTTTTGGATTTCAA+GGG - chr4_3:53908102-53908121 None:intergenic 25.0%
! TAAAGATGAAGGAAATAACA+TGG + chr4_3:53908270-53908289 Msa0647800:intron 25.0%
! AAAGATGAAGGAAATAACAT+GGG + chr4_3:53908271-53908290 Msa0647800:intron 25.0%
! TGTCAAATTACATGAATGAT+TGG + chr4_3:53908574-53908593 Msa0647800:intron 25.0%
! TTATCATTATCATATGCTAC+AGG + chr4_3:53908758-53908777 Msa0647800:five_prime_UTR 25.0%
! CATTATTATTCTCAAGTTCA+AGG + chr4_3:53908789-53908808 Msa0647800:five_prime_UTR 25.0%
! TGAAAAGATTGTGAATGAAT+TGG - chr4_3:53908923-53908942 None:intergenic 25.0%
! AACCAGAAAGAAGAATATAT+AGG + chr4_3:53908980-53908999 Msa0647800:five_prime_UTR 25.0%
! AACCTATATATTCTTCTTTC+TGG - chr4_3:53908985-53909004 None:intergenic 25.0%
! ACATCATTTACATACAAGTT+TGG - chr4_3:53909322-53909341 None:intergenic 25.0%
! ACTTGTATGTAAATGATGTA+AGG + chr4_3:53909323-53909342 Msa0647800:intron 25.0%
! CTTGTATGTAAATGATGTAA+GGG + chr4_3:53909324-53909343 Msa0647800:intron 25.0%
! TTGTATGTAAATGATGTAAG+GGG + chr4_3:53909325-53909344 Msa0647800:intron 25.0%
! CTGAAACTATTTAGTAACAT+AGG + chr4_3:53909563-53909582 Msa0647800:intron 25.0%
! GTATTTATGATTTCTTGTTG+AGG + chr4_3:53909737-53909756 Msa0647800:intron 25.0%
! TGAAATGCATATCATTTATG+AGG - chr4_3:53909791-53909810 None:intergenic 25.0%
! CATAAATGATATGCATTTCA+AGG + chr4_3:53909791-53909810 Msa0647800:intron 25.0%
! CAATTATTATATCTCAAACC+GGG + chr4_3:53910234-53910253 Msa0647800:intron 25.0%
!! ACTATTGAAACTTTCTGTTT+TGG - chr4_3:53910272-53910291 None:intergenic 25.0%
! AAAACAGAAAGTTTCAATAG+TGG + chr4_3:53910271-53910290 Msa0647800:intron 25.0%
! TTCGTTTGATGTAATAAATC+TGG + chr4_3:53910831-53910850 Msa0647800:intron 25.0%
!!! TCGTAATTATTTTTCTCATG+GGG + chr4_3:53910911-53910930 Msa0647800:intron 25.0%
! AAGAAATTGATACAAGAAGA+AGG - chr4_3:53910942-53910961 None:intergenic 25.0%
! CAAACTAATCATCGTAAATT+AGG - chr4_3:53910978-53910997 None:intergenic 25.0%
!! CTAATTTACGATGATTAGTT+TGG + chr4_3:53910976-53910995 Msa0647800:intron 25.0%
!! CACATTTCTCAATTTTTATG+TGG - chr4_3:53911326-53911345 None:intergenic 25.0%
!! TGTACAAATATTTGTTGGTT+TGG + chr4_3:53911375-53911394 Msa0647800:intron 25.0%
! AACAATAAGGAACAATGAAT+TGG - chr4_3:53911600-53911619 None:intergenic 25.0%
! AATTCATTGTTCCTTATTGT+TGG + chr4_3:53911599-53911618 Msa0647800:intron 25.0%
! AAACTTAAGAACCAACAATA+AGG - chr4_3:53911613-53911632 None:intergenic 25.0%
! ATACTACTAGTATAACATGT+GGG - chr4_3:53911722-53911741 None:intergenic 25.0%
! AATACTACTAGTATAACATG+TGG - chr4_3:53911723-53911742 None:intergenic 25.0%
!! GAAACTTTTAACAAAGATAG+AGG - chr4_3:53912010-53912029 None:intergenic 25.0%
!! TTTCGAGTAAATCACTAAAT+TGG - chr4_3:53912087-53912106 None:intergenic 25.0%
! AGATATAAGGAAATCTAGAA+TGG - chr4_3:53912662-53912681 None:intergenic 25.0%
! TCATAAGATGGAAAAAGAAA+CGG - chr4_3:53913050-53913069 None:intergenic 25.0%
!! TTTAAAATCCGAAATGCATA+GGG - chr4_3:53913085-53913104 None:intergenic 25.0%
!!! TTTTAAAATCCGAAATGCAT+AGG - chr4_3:53913086-53913105 None:intergenic 25.0%
! TACATAGGACATATTTAAGA+AGG - chr4_3:53913219-53913238 None:intergenic 25.0%
! AACCAAAGAAACATATACAT+AGG - chr4_3:53913234-53913253 None:intergenic 25.0%
! CATTGAAAGAAAGCAATAAA+AGG - chr4_3:53913365-53913384 None:intergenic 25.0%
!! CTTTTATTGCTTTCTTTCAA+TGG + chr4_3:53913363-53913382 Msa0647800:intron 25.0%
! TGGATACTACACTTTATAAT+TGG + chr4_3:53913427-53913446 Msa0647800:intron 25.0%
! ACACATTCTAGGTAAAAAAT+TGG - chr4_3:53913531-53913550 None:intergenic 25.0%
!!! TTACAATTTTGACATTGTTG+GGG - chr4_3:53913606-53913625 None:intergenic 25.0%
! TTTGGTAAGAGAAAATGTAT+AGG - chr4_3:53913804-53913823 None:intergenic 25.0%
!!! CATATAGGATTTTTTTTAGG+GGG - chr4_3:53913839-53913858 None:intergenic 25.0%
!!! GCATATAGGATTTTTTTTAG+GGG - chr4_3:53913840-53913859 None:intergenic 25.0%
!!! GTGCATATAGGATTTTTTTT+AGG - chr4_3:53913842-53913861 None:intergenic 25.0%
! ATAAAATTCTATCTTCTGCT+TGG + chr4_3:53913904-53913923 Msa0647800:intron 25.0%
! ATATTAGGTAAAACTCATGT+GGG - chr4_3:53914116-53914135 None:intergenic 25.0%
! TTAACACTCATTCTCATATT+AGG - chr4_3:53914131-53914150 None:intergenic 25.0%
! CTAAAACAAGACAACAAAAA+AGG - chr4_3:53914334-53914353 None:intergenic 25.0%
!!! CTTTTTTGTTGTCTTGTTTT+AGG + chr4_3:53914332-53914351 Msa0647800:intron 25.0%
! GTCATTCAAAGAGAATATAA+AGG + chr4_3:53914395-53914414 Msa0647800:intron 25.0%
!!! GCTCATTTTTCTCTATAAAA+AGG - chr4_3:53914893-53914912 None:intergenic 25.0%
! ATTTGATCTATATTGTGAAC+TGG + chr4_3:53914929-53914948 Msa0647800:intron 25.0%
!!! TATCTTTTTTGGTAGTGTTT+TGG - chr4_3:53915211-53915230 None:intergenic 25.0%
!! ACTATAATTTTCTTCTGATG+CGG - chr4_3:53915766-53915785 None:intergenic 25.0%
! AAGTGAGTGATAAAAATTAG+TGG - chr4_3:53915795-53915814 None:intergenic 25.0%
! GTATAGATAGAAAAATGTTG+TGG - chr4_3:53915921-53915940 None:intergenic 25.0%
! CCAAAAAAACTAATTAAGAG+AGG - chr4_3:53915943-53915962 None:intergenic 25.0%
!!! CCTCTCTTAATTAGTTTTTT+TGG + chr4_3:53915940-53915959 Msa0647800:intron 25.0%
! CTTCATCAATATAAATGTGA+GGG - chr4_3:53916038-53916057 None:intergenic 25.0%
! TCTTCATCAATATAAATGTG+AGG - chr4_3:53916039-53916058 None:intergenic 25.0%
! TCACATTTATATTGATGAAG+AGG + chr4_3:53916038-53916057 Msa0647800:intron 25.0%
! CACATTTATATTGATGAAGA+GGG + chr4_3:53916039-53916058 Msa0647800:intron 25.0%
! ACAATGCATTACAATATGTT+AGG + chr4_3:53916286-53916305 Msa0647800:intron 25.0%
! CAATGCATTACAATATGTTA+GGG + chr4_3:53916287-53916306 Msa0647800:intron 25.0%
! AATAATTACCAAATGGTACA+CGG - chr4_3:53916419-53916438 None:intergenic 25.0%
! AAGAAAAAAATTCCGAACTA+TGG + chr4_3:53916554-53916573 Msa0647800:CDS 25.0%
! AAAGTTCTCTACAAAAGTAA+GGG - chr4_3:53916606-53916625 None:intergenic 25.0%
! GTCTTTACATAAATGAAAAC+TGG - chr4_3:53916672-53916691 None:intergenic 25.0%
! TAAAAGAAAATGTATGCATG+TGG - chr4_3:53916706-53916725 None:intergenic 25.0%
! TTAATTGATGTTGAAACTTC+AGG + chr4_3:53917590-53917609 Msa0647800:intron 25.0%
! AATCAGAATTGATACATCTT+AGG - chr4_3:53918251-53918270 None:intergenic 25.0%
! TTTCAAAGGTCAAAAACATA+AGG - chr4_3:53918625-53918644 None:intergenic 25.0%
! TTTGGATATTGTGATAACTT+CGG + chr4_3:53918690-53918709 Msa0647800:intron 25.0%
!!! TCTCGTTTTTTTTCCTTATT+AGG + chr4_3:53918786-53918805 Msa0647800:intron 25.0%
! CTAAATAGAAATGCTTACAT+TGG - chr4_3:53918938-53918957 None:intergenic 25.0%
! ATCATTGTATCTATATGTGT+TGG + chr4_3:53919238-53919257 Msa0647800:intron 25.0%
!! CTTATGTCATAGAATTTGTT+TGG - chr4_3:53919478-53919497 None:intergenic 25.0%
!!! TTAACATAAGCTATTTTCAC+AGG - chr4_3:53919525-53919544 None:intergenic 25.0%
! TCATATGTATAAGTTCAGTA+AGG - chr4_3:53919560-53919579 None:intergenic 25.0%
! TGAACTTATACATATGAAAC+AGG + chr4_3:53919563-53919582 Msa0647800:intron 25.0%
!! AACAGGTATTTTATAGAGAA+AGG + chr4_3:53919580-53919599 Msa0647800:intron 25.0%
!! TTTTATAGAGAAAGGATGAA+TGG + chr4_3:53919588-53919607 Msa0647800:intron 25.0%
!! GGAAGTTAATTGGGTTTTAA+AGG - chr4_3:53902968-53902987 None:intergenic 30.0%
GAATAGATGGGAAGTTAATT+GGG - chr4_3:53902977-53902996 None:intergenic 30.0%
TGAATAGATGGGAAGTTAAT+TGG - chr4_3:53902978-53902997 None:intergenic 30.0%
! AGAGTTATGTTGCCAAATTT+TGG + chr4_3:53903266-53903285 Msa0647800:five_prime_UTR 30.0%
! GAGTTATGTTGCCAAATTTT+GGG + chr4_3:53903267-53903286 Msa0647800:five_prime_UTR 30.0%
!!! TTATTTTGGTCGGTTTATGT+AGG - chr4_3:53903539-53903558 None:intergenic 30.0%
TCGACTCTCATAGTAAAAAT+AGG + chr4_3:53903697-53903716 Msa0647800:intron 30.0%
!!! ATTGCTAATTTTGATTTCGG+TGG - chr4_3:53903807-53903826 None:intergenic 30.0%
AATGATATTTGCATGTTTCG+TGG - chr4_3:53904079-53904098 None:intergenic 30.0%
TTGATCTTACCAATAGATTC+TGG + chr4_3:53904113-53904132 Msa0647800:intron 30.0%
CTTAAATGTCTAAATGTTGC+AGG + chr4_3:53904392-53904411 Msa0647800:intron 30.0%
! ACAAACTCTTTCTTTTGTAG+AGG + chr4_3:53904508-53904527 Msa0647800:intron 30.0%
TGATGGAACAATCATTGAAA+CGG + chr4_3:53904824-53904843 Msa0647800:five_prime_UTR 30.0%
!!! TTATTTTGGTGAAGCCAAAA+CGG + chr4_3:53905136-53905155 Msa0647800:five_prime_UTR 30.0%
!! TTATACTTCTATTGCCGTTT+TGG - chr4_3:53905153-53905172 None:intergenic 30.0%
TCGCTGTTTAAATATGTTTC+TGG + chr4_3:53905223-53905242 Msa0647800:intron 30.0%
TCTGGTCTCTTCAAATATAT+AGG + chr4_3:53905241-53905260 Msa0647800:intron 30.0%
! TCTAACCATATAGGATCTTT+TGG + chr4_3:53905425-53905444 Msa0647800:intron 30.0%
CTATTCCAAAAGATCCTATA+TGG - chr4_3:53905433-53905452 None:intergenic 30.0%
! CAATTAAAAGTATGGAAGTG+TGG + chr4_3:53905725-53905744 Msa0647800:intron 30.0%
GCTAGTGATAAATGTATTAC+AGG + chr4_3:53906119-53906138 Msa0647800:intron 30.0%
GTGATAAATGTATTACAGGA+AGG + chr4_3:53906123-53906142 Msa0647800:intron 30.0%
CTTGAAACTGAGAGAAAATA+TGG + chr4_3:53906147-53906166 Msa0647800:five_prime_UTR 30.0%
!!! GGAACTATCTATTTTGATGT+TGG + chr4_3:53906348-53906367 Msa0647800:five_prime_UTR 30.0%
TACCTTCATTTCTTCAATGA+CGG - chr4_3:53906466-53906485 None:intergenic 30.0%
! ATCATTACTTTGGAAGTGTA+TGG + chr4_3:53906558-53906577 Msa0647800:intron 30.0%
TGAACTTATACATACGAAAC+AGG + chr4_3:53906673-53906692 Msa0647800:intron 30.0%
AACAGGTTTATAATCACGAA+AGG + chr4_3:53906690-53906709 Msa0647800:intron 30.0%
! TCTTTCATCATTCCCATTTT+TGG + chr4_3:53906757-53906776 Msa0647800:five_prime_UTR 30.0%
GGATTCATTGTAAGAACAAA+TGG + chr4_3:53906959-53906978 Msa0647800:intron 30.0%
CGATGAAAAATTAACACATG+TGG - chr4_3:53907019-53907038 None:intergenic 30.0%
!! GTTAATTTTTCATCGACTGT+TGG + chr4_3:53907024-53907043 Msa0647800:intron 30.0%
!! TATATGTTTGGTTCCACTTT+TGG - chr4_3:53907396-53907415 None:intergenic 30.0%
CGAATCAGTTAGTATATGTT+TGG - chr4_3:53907408-53907427 None:intergenic 30.0%
! CGGGATGAAATTAACTTTTT+AGG + chr4_3:53907426-53907445 Msa0647800:intron 30.0%
AAAACCTAAAGGGTCTATTT+GGG + chr4_3:53907670-53907689 Msa0647800:intron 30.0%
AAAGAATAACAGACTTTGAG+AGG + chr4_3:53907742-53907761 Msa0647800:intron 30.0%
! AAGAATAACAGACTTTGAGA+GGG + chr4_3:53907743-53907762 Msa0647800:intron 30.0%
!!! TTTTGAGTTCCACAAATTAG+GGG - chr4_3:53907808-53907827 None:intergenic 30.0%
GTGGAACTCAAAAATTGTAT+AGG + chr4_3:53907815-53907834 Msa0647800:intron 30.0%
CTCAAAAATTGTATAGGAGA+AGG + chr4_3:53907821-53907840 Msa0647800:intron 30.0%
! ATTGTATAGGAGAAGGATTT+TGG + chr4_3:53907828-53907847 Msa0647800:intron 30.0%
! TTGTATAGGAGAAGGATTTT+GGG + chr4_3:53907829-53907848 Msa0647800:intron 30.0%
ATTAGGAATGAGGAAATGTT+GGG - chr4_3:53908058-53908077 None:intergenic 30.0%
AATTAGGAATGAGGAAATGT+TGG - chr4_3:53908059-53908078 None:intergenic 30.0%
!!! CTTGAGTTTTTTGGATTTCA+AGG - chr4_3:53908103-53908122 None:intergenic 30.0%
ATGTGAGATACTAACAGTTT+CGG + chr4_3:53908159-53908178 Msa0647800:intron 30.0%
AAGATGAAGGAAATAACATG+GGG + chr4_3:53908272-53908291 Msa0647800:intron 30.0%
! GCAACATTGACATTTTACAT+CGG + chr4_3:53908338-53908357 Msa0647800:intron 30.0%
TTCAGATATGTGACATAAGT+CGG + chr4_3:53908367-53908386 Msa0647800:intron 30.0%
! TGGATAATTAATTTGGATGC+AGG + chr4_3:53908594-53908613 Msa0647800:intron 30.0%
! GGATAATTAATTTGGATGCA+GGG + chr4_3:53908595-53908614 Msa0647800:intron 30.0%
TCATACAAGAATGACTTACT+AGG + chr4_3:53908619-53908638 Msa0647800:five_prime_UTR 30.0%
CATACAAGAATGACTTACTA+GGG + chr4_3:53908620-53908639 Msa0647800:five_prime_UTR 30.0%
! CATATTCTCCTGTCAATTTT+GGG - chr4_3:53908675-53908694 None:intergenic 30.0%
! ACATATTCTCCTGTCAATTT+TGG - chr4_3:53908676-53908695 None:intergenic 30.0%
TATGTGATAACACACATGTT+TGG + chr4_3:53908691-53908710 Msa0647800:five_prime_UTR 30.0%
ATGTGATAACACACATGTTT+GGG + chr4_3:53908692-53908711 Msa0647800:five_prime_UTR 30.0%
! GCATAAAGTGTTTGAAAGAA+TGG - chr4_3:53908826-53908845 None:intergenic 30.0%
!! TCATTCACAATCTTTTCAAG+AGG + chr4_3:53908925-53908944 Msa0647800:five_prime_UTR 30.0%
! TGTTAGCTTATGTATAGAGA+AGG + chr4_3:53909095-53909114 Msa0647800:five_prime_UTR 30.0%
! TAGGCTTTAACAAATGTTAC+TGG + chr4_3:53909582-53909601 Msa0647800:intron 30.0%
! AGGCTTTAACAAATGTTACT+GGG + chr4_3:53909583-53909602 Msa0647800:intron 30.0%
!!! CTTACTCGAGTTATTTTAAC+AGG - chr4_3:53909840-53909859 None:intergenic 30.0%
CACTCATTCACTATATCATT+TGG - chr4_3:53909874-53909893 None:intergenic 30.0%
ATACAAATTCCAACTTTGGA+GGG - chr4_3:53910016-53910035 None:intergenic 30.0%
AAACAAATTTGATCAGACAC+TGG + chr4_3:53910143-53910162 Msa0647800:intron 30.0%
!! ATAGTGGTTTTCTAGAAGAA+CGG + chr4_3:53910287-53910306 Msa0647800:intron 30.0%
TCATGGTAACTATCAAACTA+TGG - chr4_3:53910339-53910358 None:intergenic 30.0%
TATTAACCTGATCCAAACAA+TGG - chr4_3:53910425-53910444 None:intergenic 30.0%
AGTATGGAGTGCAAAAAAAA+AGG + chr4_3:53910505-53910524 Msa0647800:intron 30.0%
ACTAGGAGATGTAATCTTAA+TGG + chr4_3:53910712-53910731 Msa0647800:intron 30.0%
CTAGGAGATGTAATCTTAAT+GGG + chr4_3:53910713-53910732 Msa0647800:intron 30.0%
TAGGAGATGTAATCTTAATG+GGG + chr4_3:53910714-53910733 Msa0647800:intron 30.0%
ATGGGGTCATAAATATGAAT+TGG + chr4_3:53910731-53910750 Msa0647800:intron 30.0%
! ATCCTCTTTGATGATATTTC+TGG + chr4_3:53910857-53910876 Msa0647800:intron 30.0%
TAACTATGATAGATGAGTCA+CGG + chr4_3:53911269-53911288 Msa0647800:intron 30.0%
AGATATTCAAATCCCATTAC+TGG - chr4_3:53911577-53911596 None:intergenic 30.0%
!!! TGGTTCTTAAGTTTTTTGAC+TGG + chr4_3:53911619-53911638 Msa0647800:intron 30.0%
ATCAATGCAATTGTCTTTAG+AGG + chr4_3:53911675-53911694 Msa0647800:intron 30.0%
TCAATGCAATTGTCTTTAGA+GGG + chr4_3:53911676-53911695 Msa0647800:intron 30.0%
TTTAGAGGGAATCCTTAATT+AGG + chr4_3:53911690-53911709 Msa0647800:intron 30.0%
TTAGAGGGAATCCTTAATTA+GGG + chr4_3:53911691-53911710 Msa0647800:intron 30.0%
TACTACTAGTATAACATGTG+GGG - chr4_3:53911721-53911740 None:intergenic 30.0%
AACAATTTAATGCCAAGAGA+CGG + chr4_3:53911811-53911830 Msa0647800:intron 30.0%
! TTACTCTTTCTTTTCAGCAT+TGG - chr4_3:53911919-53911938 None:intergenic 30.0%
TCAAATTAGTCCATGAATGA+GGG - chr4_3:53912043-53912062 None:intergenic 30.0%
AATAAATAAGACATGTCACC+TGG + chr4_3:53912106-53912125 Msa0647800:intron 30.0%
ATTTATGATACGTGATGGTT+AGG - chr4_3:53912172-53912191 None:intergenic 30.0%
CAACTATTTATGATACGTGA+TGG - chr4_3:53912177-53912196 None:intergenic 30.0%
ACTGAAAATTGCATATGGAT+AGG - chr4_3:53912206-53912225 None:intergenic 30.0%
AGATAGACTCTCAAAAAATG+TGG + chr4_3:53912274-53912293 Msa0647800:intron 30.0%
ATTAGAAGTGATAGCTAAAC+AGG - chr4_3:53912387-53912406 None:intergenic 30.0%
TTGTAAAGGAAATTAAGCTG+GGG - chr4_3:53912536-53912555 None:intergenic 30.0%
GTTGTAAAGGAAATTAAGCT+GGG - chr4_3:53912537-53912556 None:intergenic 30.0%
TGTTGTAAAGGAAATTAAGC+TGG - chr4_3:53912538-53912557 None:intergenic 30.0%
TATGAAGAGATAGAGTAGAT+GGG - chr4_3:53912571-53912590 None:intergenic 30.0%
TTATGAAGAGATAGAGTAGA+TGG - chr4_3:53912572-53912591 None:intergenic 30.0%
TTCCATGTTACTGTTTGATT+TGG + chr4_3:53912594-53912613 Msa0647800:intron 30.0%
TACCAAATCAAACAGTAACA+TGG - chr4_3:53912599-53912618 None:intergenic 30.0%
CATAAACATAACATGGAGAT+TGG + chr4_3:53912760-53912779 Msa0647800:intron 30.0%
! AGAGTTATGTTGCCAAATTT+TGG + chr4_3:53903266-53903285 Msa0647800:five_prime_UTR 30.0%
! GAGTTATGTTGCCAAATTTT+GGG + chr4_3:53903267-53903286 Msa0647800:five_prime_UTR 30.0%
CAACCAAAAGGTTACTTAAT+GGG + chr4_3:53912905-53912924 Msa0647800:CDS 30.0%
! TAACCCATTAAGTAACCTTT+TGG - chr4_3:53912911-53912930 None:intergenic 30.0%
!! AGGTTACTTAATGGGTTAAA+TGG + chr4_3:53912913-53912932 Msa0647800:CDS 30.0%
!!! TCGGATTTTAGAATCTGAAT+AGG + chr4_3:53913157-53913176 Msa0647800:intron 30.0%
!! ATTACTTTTCCCATCTTATG+AGG - chr4_3:53913194-53913213 None:intergenic 30.0%
TCATAAGATGGGAAAAGTAA+TGG + chr4_3:53913193-53913212 Msa0647800:intron 30.0%
GTCCTATGTATATGTTTCTT+TGG + chr4_3:53913229-53913248 Msa0647800:intron 30.0%
! AACGTGATATTTGTGGTTTT+AGG - chr4_3:53913319-53913338 None:intergenic 30.0%
!!! ACCACAAATATCACGTTTTT+TGG + chr4_3:53913322-53913341 Msa0647800:intron 30.0%
TCCAAAAAACGTGATATTTG+TGG - chr4_3:53913326-53913345 None:intergenic 30.0%
!!! CAAATATCACGTTTTTTGGA+AGG + chr4_3:53913326-53913345 Msa0647800:intron 30.0%
GATATCGAAATACACATTCT+AGG - chr4_3:53913542-53913561 None:intergenic 30.0%
GAAGAAAAAAATGTAGGATG+TGG - chr4_3:53913737-53913756 None:intergenic 30.0%
TATAGGATTGATGCAAAGTT+GGG - chr4_3:53913868-53913887 None:intergenic 30.0%
ATATAGGATTGATGCAAAGT+TGG - chr4_3:53913869-53913888 None:intergenic 30.0%
AAATAAAACCTTGCACCATA+TGG - chr4_3:53913992-53914011 None:intergenic 30.0%
CATATTAGGTAAAACTCATG+TGG - chr4_3:53914117-53914136 None:intergenic 30.0%
ATTTCTCTTATTCAATTGGC+AGG + chr4_3:53914185-53914204 Msa0647800:intron 30.0%
TTTCTCTTATTCAATTGGCA+GGG + chr4_3:53914186-53914205 Msa0647800:intron 30.0%
!!! TTTTTTTAGGCTCATACCTT+GGG - chr4_3:53914255-53914274 None:intergenic 30.0%
!!! ATTTTTTTAGGCTCATACCT+TGG - chr4_3:53914256-53914275 None:intergenic 30.0%
AAAAAGGAATGTGGAAACTT+GGG - chr4_3:53914318-53914337 None:intergenic 30.0%
AAAAAAGGAATGTGGAAACT+TGG - chr4_3:53914319-53914338 None:intergenic 30.0%
AAGACAACAAAAAAGGAATG+TGG - chr4_3:53914327-53914346 None:intergenic 30.0%
GAGAATATAAAGGGTAAGTT+TGG + chr4_3:53914405-53914424 Msa0647800:intron 30.0%
GAAAATGTTAATTAGTGTCC+TGG - chr4_3:53914526-53914545 None:intergenic 30.0%
! CTCAATTCAAATCCCAATTT+TGG + chr4_3:53914713-53914732 Msa0647800:intron 30.0%
! AATTCAAATCCCAATTTTGG+TGG + chr4_3:53914716-53914735 Msa0647800:intron 30.0%
AATCCACAAGTCAAAATATG+AGG - chr4_3:53914777-53914796 None:intergenic 30.0%
!! TGACTTGTGGATTTTGAAAA+AGG + chr4_3:53914784-53914803 Msa0647800:intron 30.0%
!! GACTTGTGGATTTTGAAAAA+GGG + chr4_3:53914785-53914804 Msa0647800:intron 30.0%
GCAATCTTAATTACTCTCTT+TGG - chr4_3:53914996-53915015 None:intergenic 30.0%
TAACGTTCTAATACCTACAA+AGG + chr4_3:53915601-53915620 Msa0647800:intron 30.0%
AACGAAATAAACACTGCAAT+AGG + chr4_3:53915721-53915740 Msa0647800:intron 30.0%
TTACCAATTAGACCAATCTA+TGG - chr4_3:53915868-53915887 None:intergenic 30.0%
!! ATAGATTGGTCTAATTGGTA+AGG + chr4_3:53915867-53915886 Msa0647800:intron 30.0%
TCAATATAAATGTGAGGGAA+AGG - chr4_3:53916033-53916052 None:intergenic 30.0%
!!! CCTTTTTATTTTTGGTCAAG+TGG - chr4_3:53916362-53916381 None:intergenic 30.0%
CCACTTGACCAAAAATAAAA+AGG + chr4_3:53916359-53916378 Msa0647800:intron 30.0%
!!! TTGACGCTCCTTTTTATTTT+TGG - chr4_3:53916370-53916389 None:intergenic 30.0%
ATAATTACCAAATGGTACAC+GGG - chr4_3:53916418-53916437 None:intergenic 30.0%
CAATGTTATTGTTGTATTGC+AGG + chr4_3:53916482-53916501 Msa0647800:intron 30.0%
CTTACAACAAAACCATAGTT+CGG - chr4_3:53916569-53916588 None:intergenic 30.0%
GAAAGTTCTCTACAAAAGTA+AGG - chr4_3:53916607-53916626 None:intergenic 30.0%
CTATGACATCTAAACTATGT+TGG + chr4_3:53916828-53916847 Msa0647800:intron 30.0%
AAGAATGATACAAAGGCAAT+CGG + chr4_3:53916908-53916927 Msa0647800:intron 30.0%
!! AGTTATTATGGTTTGGGTTT+TGG - chr4_3:53916944-53916963 None:intergenic 30.0%
TCATGGAAATTAACAACATC+AGG - chr4_3:53917219-53917238 None:intergenic 30.0%
CGGATAGAATGTATAATATG+AGG - chr4_3:53917325-53917344 None:intergenic 30.0%
TTATACATTCTATCCGTTGA+TGG + chr4_3:53917329-53917348 Msa0647800:intron 30.0%
GATGGAACAATCATAGAAAT+GGG + chr4_3:53917732-53917751 Msa0647800:CDS 30.0%
TTCTGATTTCGATGTTGTAA+CGG + chr4_3:53918263-53918282 Msa0647800:CDS 30.0%
TACAATGGATGAAGAAATGA+GGG - chr4_3:53918585-53918604 None:intergenic 30.0%
TTGGATATTGTGATAACTTC+GGG + chr4_3:53918691-53918710 Msa0647800:intron 30.0%
TCTTAGAAAGGGAAGTTTAT+AGG - chr4_3:53918720-53918739 None:intergenic 30.0%
! GAATTTGGAACATCCTAATA+AGG - chr4_3:53918802-53918821 None:intergenic 30.0%
TACACAGACAAAATATCCTA+AGG - chr4_3:53919012-53919031 None:intergenic 30.0%
GTCTGTGTAATTATTGTATC+CGG + chr4_3:53919023-53919042 Msa0647800:intron 30.0%
CTTGAAACTGAGATAAACTA+TGG + chr4_3:53919112-53919131 Msa0647800:CDS 30.0%
TTTATGACTACCATCTCAAT+TGG + chr4_3:53919337-53919356 Msa0647800:CDS 30.0%
TACCTTCATTTCTTCAATGA+CGG - chr4_3:53906466-53906485 None:intergenic 30.0%
TCCACGTTACTCTTTGAATT+TGG + chr4_3:53903005-53903024 Msa0647800:five_prime_UTR 35.0%
ACCAAATTCAAAGAGTAACG+TGG - chr4_3:53903009-53903028 None:intergenic 35.0%
!! ATGTTGCCAAATTTTGGGAA+AGG + chr4_3:53903272-53903291 Msa0647800:five_prime_UTR 35.0%
! CCATTAAGCAACCTTTTAGT+TGG - chr4_3:53903299-53903318 None:intergenic 35.0%
CCAACTAAAAGGTTGCTTAA+TGG + chr4_3:53903296-53903315 Msa0647800:five_prime_UTR 35.0%
!! AGGTTGCTTAATGGACTAAA+TGG + chr4_3:53903305-53903324 Msa0647800:five_prime_UTR 35.0%
ATAATAGCCATGATTCTACC+AGG - chr4_3:53903341-53903360 None:intergenic 35.0%
TGGTAGAATCATGGCTATTA+TGG + chr4_3:53903340-53903359 Msa0647800:five_prime_UTR 35.0%
GGTAGAATCATGGCTATTAT+GGG + chr4_3:53903341-53903360 Msa0647800:five_prime_UTR 35.0%
! TATGTAGGAGTGAGCAATTT+TGG - chr4_3:53903524-53903543 None:intergenic 35.0%
GCAGAAGCAAGTTATTGATA+AGG - chr4_3:53903642-53903661 None:intergenic 35.0%
!!! TTTCTTTTTTGAGTGGGTGT+AGG + chr4_3:53903918-53903937 Msa0647800:intron 35.0%
!!! TTCTTTTTTGAGTGGGTGTA+GGG + chr4_3:53903919-53903938 Msa0647800:intron 35.0%
! TTGATGTTAGGTGGTTTTCA+GGG - chr4_3:53904029-53904048 None:intergenic 35.0%
! TTTGATGTTAGGTGGTTTTC+AGG - chr4_3:53904030-53904049 None:intergenic 35.0%
TATTTGCATGTTTCGTGGAA+TGG - chr4_3:53904074-53904093 None:intergenic 35.0%
!! ACCAATAGATTCTGGAACAT+AGG + chr4_3:53904121-53904140 Msa0647800:intron 35.0%
AATGGGAAGAAAAAAACTCC+AGG + chr4_3:53904458-53904477 Msa0647800:five_prime_UTR 35.0%
AAGAAAAAAACTCCAGGCTA+TGG + chr4_3:53904464-53904483 Msa0647800:five_prime_UTR 35.0%
TTGATCGATGTTGAAACTTC+AGG + chr4_3:53904683-53904702 Msa0647800:intron 35.0%
! ACACAAGAAGATGTGTTGTT+AGG + chr4_3:53904714-53904733 Msa0647800:five_prime_UTR 35.0%
TCTTCTTTGGACATTGTTGA+TGG - chr4_3:53904789-53904808 None:intergenic 35.0%
ATGTCCAAAGAAGAAATCAG+CGG + chr4_3:53904795-53904814 Msa0647800:five_prime_UTR 35.0%
GATGGAACAATCATTGAAAC+GGG + chr4_3:53904825-53904844 Msa0647800:five_prime_UTR 35.0%
TTTCTTGATGAACCAACTAG+TGG + chr4_3:53904963-53904982 Msa0647800:five_prime_UTR 35.0%
! GGTGGAGAAACTGTTTATTT+TGG + chr4_3:53905122-53905141 Msa0647800:five_prime_UTR 35.0%
CATCTTAGAAAGTGATCAGA+AGG - chr4_3:53905328-53905347 None:intergenic 35.0%
TGCAATGTCGAAATCAGTAT+TGG - chr4_3:53905353-53905372 None:intergenic 35.0%
!! CTACACTAAAGGTATCTCAA+AGG + chr4_3:53905377-53905396 Msa0647800:five_prime_UTR 35.0%
!!! GATCTTTTGGAATAGCTTGT+TGG + chr4_3:53905438-53905457 Msa0647800:intron 35.0%
AGTTAGCCCAAATTCTTCAT+CGG + chr4_3:53905637-53905656 Msa0647800:intron 35.0%
CTACAACCGATGAAGAATTT+GGG - chr4_3:53905646-53905665 None:intergenic 35.0%
TCTACAACCGATGAAGAATT+TGG - chr4_3:53905647-53905666 None:intergenic 35.0%
ATGAAAGGATCAGCTGAATT+TGG - chr4_3:53905871-53905890 None:intergenic 35.0%
AGCTGATCCTTTCATGAATT+TGG + chr4_3:53905876-53905895 Msa0647800:five_prime_UTR 35.0%
CAATGCTAGTTGAGAGATTT+AGG + chr4_3:53905917-53905936 Msa0647800:five_prime_UTR 35.0%
! AATCTTGTCTTTTACCCTTC+TGG - chr4_3:53905956-53905975 None:intergenic 35.0%
CTATGTAGAAATGCATACGT+TGG - chr4_3:53905992-53906011 None:intergenic 35.0%
CTATAGCTATACTTCCATCT+TGG + chr4_3:53906371-53906390 Msa0647800:five_prime_UTR 35.0%
ATGATGACCACCATATCAAT+TGG + chr4_3:53906429-53906448 Msa0647800:five_prime_UTR 35.0%
! TTCATTTCTTCAATGACGGA+TGG - chr4_3:53906462-53906481 None:intergenic 35.0%
ATCCGTCATTGAAGAAATGA+AGG + chr4_3:53906461-53906480 Msa0647800:five_prime_UTR 35.0%
TATAATCACGAAAGGCTCAA+TGG + chr4_3:53906698-53906717 Msa0647800:five_prime_UTR 35.0%
GAAAGGCTCAATGGATATTA+TGG + chr4_3:53906707-53906726 Msa0647800:five_prime_UTR 35.0%
CAATGGATATTATGGAGTAG+CGG + chr4_3:53906715-53906734 Msa0647800:five_prime_UTR 35.0%
GAGCAATAGCAACCAAAAAT+GGG - chr4_3:53906772-53906791 None:intergenic 35.0%
AGAGCAATAGCAACCAAAAA+TGG - chr4_3:53906773-53906792 None:intergenic 35.0%
TTGCACAATCACATGTAACA+TGG + chr4_3:53906799-53906818 Msa0647800:five_prime_UTR 35.0%
CATGTAACATGGTGAAATTC+AGG + chr4_3:53906810-53906829 Msa0647800:five_prime_UTR 35.0%
CATTGTAAGAACAAATGGCT+AGG + chr4_3:53906964-53906983 Msa0647800:intron 35.0%
ATTAACACATGTGGATCATG+TGG - chr4_3:53907010-53907029 None:intergenic 35.0%
ATATATCAGTTATGGCGCAT+GGG + chr4_3:53907136-53907155 Msa0647800:five_prime_UTR 35.0%
TTTATGGGAACAGAACCAAA+CGG - chr4_3:53907194-53907213 None:intergenic 35.0%
! GAGTAGAACAGATTTTGCTT+TGG - chr4_3:53907336-53907355 None:intergenic 35.0%
! ATTTTTGCATCCTCCAAAAG+TGG + chr4_3:53907380-53907399 Msa0647800:intron 35.0%
ATGGTATCAAACTCGTGATT+CGG - chr4_3:53907564-53907583 None:intergenic 35.0%
ACGAGTTTGATACCATTTGT+TGG + chr4_3:53907568-53907587 Msa0647800:intron 35.0%
CGAGTTTGATACCATTTGTT+GGG + chr4_3:53907569-53907588 Msa0647800:intron 35.0%
! GAGTTTGATACCATTTGTTG+GGG + chr4_3:53907570-53907589 Msa0647800:intron 35.0%
!!! CTTTTAGCTCATGTTCACTT+CGG - chr4_3:53907610-53907629 None:intergenic 35.0%
ATCTTTGCGCAAAACCTAAA+GGG + chr4_3:53907660-53907679 Msa0647800:intron 35.0%
CAAAACCTAAAGGGTCTATT+TGG + chr4_3:53907669-53907688 Msa0647800:intron 35.0%
! AGAATAACAGACTTTGAGAG+GGG + chr4_3:53907744-53907763 Msa0647800:intron 35.0%
TAAAAGATCCCCCTAATTTG+TGG + chr4_3:53907796-53907815 Msa0647800:intron 35.0%
! TTTGAGTTCCACAAATTAGG+GGG - chr4_3:53907807-53907826 None:intergenic 35.0%
! TGTATAGGAGAAGGATTTTG+GGG + chr4_3:53907830-53907849 Msa0647800:intron 35.0%
TTCCTCATTCCTAATTGATG+TGG + chr4_3:53908063-53908082 Msa0647800:intron 35.0%
TCCTCATTCCTAATTGATGT+GGG + chr4_3:53908064-53908083 Msa0647800:intron 35.0%
!!! AATGTGGCACTTGAGTTTTT+TGG - chr4_3:53908112-53908131 None:intergenic 35.0%
GAGTGTACTAGTAAAGATGA+AGG + chr4_3:53908259-53908278 Msa0647800:intron 35.0%
AGATGAAGGAAATAACATGG+GGG + chr4_3:53908273-53908292 Msa0647800:intron 35.0%
TTGAATTAAGCCATTCCAAG+TGG + chr4_3:53908716-53908735 Msa0647800:five_prime_UTR 35.0%
! TCTTTTCTCAAGCTGATGTA+AGG - chr4_3:53908857-53908876 None:intergenic 35.0%
TTGAGAAAAGACCATCTTTC+AGG + chr4_3:53908866-53908885 Msa0647800:five_prime_UTR 35.0%
! TTGTTCTTCTAGTAGTGGAA+TGG - chr4_3:53908962-53908981 None:intergenic 35.0%
TTTACTGCAGAAATTCCAGA+TGG + chr4_3:53909438-53909457 Msa0647800:intron 35.0%
! TCCAGATGGTGATTAGTTAA+TGG + chr4_3:53909452-53909471 Msa0647800:intron 35.0%
TCCATTAACTAATCACCATC+TGG - chr4_3:53909456-53909475 None:intergenic 35.0%
TTGGTTGCTGAAACTAACAT+AGG + chr4_3:53909535-53909554 Msa0647800:intron 35.0%
TGACTTTGCTGATATACTGT+TGG + chr4_3:53909713-53909732 Msa0647800:intron 35.0%
ATTTCCCTGGATTATCACAA+AGG - chr4_3:53909766-53909785 None:intergenic 35.0%
! TACAAATTCCAACTTTGGAG+GGG - chr4_3:53910015-53910034 None:intergenic 35.0%
CATACAAATTCCAACTTTGG+AGG - chr4_3:53910017-53910036 None:intergenic 35.0%
AGGCATACAAATTCCAACTT+TGG - chr4_3:53910020-53910039 None:intergenic 35.0%
TCCAAACTTGGAACGTTATT+AGG - chr4_3:53910040-53910059 None:intergenic 35.0%
ATAACGTTCCAAGTTTGGAT+TGG + chr4_3:53910041-53910060 Msa0647800:intron 35.0%
! TGTAAACACCAGTTAGTTCT+TGG - chr4_3:53910082-53910101 None:intergenic 35.0%
TAAAACACACTTTAATGCCC+CGG + chr4_3:53910386-53910405 Msa0647800:intron 35.0%
AATCTTAGCAATAGCGAGTA+TGG + chr4_3:53910489-53910508 Msa0647800:intron 35.0%
ATTACGTGAGTAGGATCTTA+AGG - chr4_3:53910606-53910625 None:intergenic 35.0%
AGCACAATTGTCTTACAAGA+GGG + chr4_3:53910658-53910677 Msa0647800:intron 35.0%
TACAAGAGGGCAATATAAGA+TGG + chr4_3:53910671-53910690 Msa0647800:intron 35.0%
AGGGCAATATAAGATGGTTA+CGG + chr4_3:53910677-53910696 Msa0647800:intron 35.0%
ATTACATCTCCTAGTAACCA+TGG - chr4_3:53910707-53910726 None:intergenic 35.0%
TTAAAGCATACGTGTTGAGA+AGG + chr4_3:53910763-53910782 Msa0647800:intron 35.0%
!! AAGGCAATAGAAGTGTTGAT+TGG + chr4_3:53910782-53910801 Msa0647800:intron 35.0%
CTCCAGAAATATCATCAAAG+AGG - chr4_3:53910862-53910881 None:intergenic 35.0%
!!! TTCATCGATTTTGTCCGAAT+CGG + chr4_3:53911516-53911535 Msa0647800:intron 35.0%
!! TTCTTTTCAGCATTGGAGTT+TGG - chr4_3:53911912-53911931 None:intergenic 35.0%
CTCAAATTAGTCCATGAATG+AGG - chr4_3:53912044-53912063 None:intergenic 35.0%
! GTAGCACTGAAAATTGCATA+TGG - chr4_3:53912211-53912230 None:intergenic 35.0%
GAAAAAACAATTCCAGCACA+TGG + chr4_3:53912310-53912329 Msa0647800:intron 35.0%
TGTAAAGGAAATTAAGCTGG+GGG - chr4_3:53912535-53912554 None:intergenic 35.0%
GGAGAGTTATTGTGTTGTAA+AGG - chr4_3:53912550-53912569 None:intergenic 35.0%
! GCATATTGTGGTCTTAATAG+AGG + chr4_3:53912826-53912845 Msa0647800:CDS 35.0%
!! ATAGAGGAAGCTTTTTAGCA+TGG + chr4_3:53912842-53912861 Msa0647800:CDS 35.0%
!! TAGAGGAAGCTTTTTAGCAT+GGG + chr4_3:53912843-53912862 Msa0647800:CDS 35.0%
!! ATGTTGCCAAATTTTGGGAA+AGG + chr4_3:53903272-53903291 Msa0647800:five_prime_UTR 35.0%
! CCATTAAGTAACCTTTTGGT+TGG - chr4_3:53912907-53912926 None:intergenic 35.0%
CCAACCAAAAGGTTACTTAA+TGG + chr4_3:53912904-53912923 Msa0647800:CDS 35.0%
GAAACGGTCATTTAAGAATG+AGG - chr4_3:53913034-53913053 None:intergenic 35.0%
ATGCAAGAACCTCATAAGAT+GGG + chr4_3:53913182-53913201 Msa0647800:intron 35.0%
CTCAAACATGAGTCAATTCA+AGG + chr4_3:53913289-53913308 Msa0647800:intron 35.0%
TAACACACTCTCTTATTCGA+TGG + chr4_3:53913396-53913415 Msa0647800:intron 35.0%
CTTATTCGATGGAATCTATG+TGG + chr4_3:53913407-53913426 Msa0647800:intron 35.0%
!!! AGGGGGTATAGGATTTTTTT+TGG - chr4_3:53913822-53913841 None:intergenic 35.0%
!!! GGATTTTTTTTAGGGGGTAT+AGG - chr4_3:53913833-53913852 None:intergenic 35.0%
!!! TGGTGCAAGGTTTTATTTTG+AGG + chr4_3:53913994-53914013 Msa0647800:intron 35.0%
!!! GGTGCAAGGTTTTATTTTGA+GGG + chr4_3:53913995-53914014 Msa0647800:intron 35.0%
!!! GTGCAAGGTTTTATTTTGAG+GGG + chr4_3:53913996-53914015 Msa0647800:intron 35.0%
!!! TGCAAGGTTTTATTTTGAGG+GGG + chr4_3:53913997-53914016 Msa0647800:intron 35.0%
!!! TTTTTTAGGCTCATACCTTG+GGG - chr4_3:53914254-53914273 None:intergenic 35.0%
AAAAGGAATGTGGAAACTTG+GGG - chr4_3:53914317-53914336 None:intergenic 35.0%
ATTGGGATTTGAATTGAGTG+TGG - chr4_3:53914711-53914730 None:intergenic 35.0%
!! AAATCCCAATTTTGGTGGTT+GGG + chr4_3:53914721-53914740 Msa0647800:intron 35.0%
AGTAAAGCCTAAACAAGTGT+TGG + chr4_3:53915167-53915186 Msa0647800:intron 35.0%
TTTAATGTTGTCGCCTTTGT+AGG - chr4_3:53915617-53915636 None:intergenic 35.0%
!!! ATTTTTTGGCCACCATAGAT+TGG + chr4_3:53915853-53915872 Msa0647800:intron 35.0%
ATAGAAAAATGTTGTGGGAG+AGG - chr4_3:53915915-53915934 None:intergenic 35.0%
GATCCAAGTCCTTAATTCAT+AGG + chr4_3:53916077-53916096 Msa0647800:intron 35.0%
AAGCCTATGAATTAAGGACT+TGG - chr4_3:53916083-53916102 None:intergenic 35.0%
!! TCCTGACATGTGATTAGTTT+CGG + chr4_3:53916104-53916123 Msa0647800:intron 35.0%
GCATTACAATATGTTAGGGT+TGG + chr4_3:53916291-53916310 Msa0647800:intron 35.0%
AGGTAGACTTCCAAAAAATG+TGG + chr4_3:53916502-53916521 Msa0647800:intron 35.0%
! TCCAAAAAATGTGGTGATGA+CGG + chr4_3:53916511-53916530 Msa0647800:CDS 35.0%
! CGAGCAGAAGAATTTTTATG+TGG - chr4_3:53917181-53917200 None:intergenic 35.0%
TCAGTTATATGACACGTTGT+TGG - chr4_3:53917399-53917418 None:intergenic 35.0%
! ACACAAGAAGATGTGTTGTT+AGG + chr4_3:53904714-53904733 Msa0647800:five_prime_UTR 35.0%
TCTTCTTTGGACATTGTTGA+TGG - chr4_3:53904789-53904808 None:intergenic 35.0%
!! TATGCTGTTGACTTCTTCTT+TGG - chr4_3:53917709-53917728 None:intergenic 35.0%
CGATGGAACAATCATAGAAA+TGG + chr4_3:53917731-53917750 Msa0647800:CDS 35.0%
CAGATAGGTTAATAGGTAAC+TGG + chr4_3:53917769-53917788 Msa0647800:intron 35.0%
TCATCAAGAAACAACAAACG+AGG - chr4_3:53917861-53917880 None:intergenic 35.0%
TTACTTTGGTGAAGCCAAAA+TGG + chr4_3:53918043-53918062 Msa0647800:CDS 35.0%
!! TTATACCTCGATTGCCATTT+TGG - chr4_3:53918060-53918079 None:intergenic 35.0%
TCAGAAGGATTTCTATTACG+CGG - chr4_3:53918222-53918241 None:intergenic 35.0%
TGTTGTAACGGCTATACTAA+AGG + chr4_3:53918275-53918294 Msa0647800:CDS 35.0%
GTTGTAACGGCTATACTAAA+GGG + chr4_3:53918276-53918295 Msa0647800:CDS 35.0%
TTGTAACGGCTATACTAAAG+GGG + chr4_3:53918277-53918296 Msa0647800:CDS 35.0%
ATCATATACTTATCCCGCTT+AGG + chr4_3:53918375-53918394 Msa0647800:intron 35.0%
CTACAATGGATGAAGAAATG+AGG - chr4_3:53918586-53918605 None:intergenic 35.0%
CATAGCATCACTTATTCACA+TGG + chr4_3:53918754-53918773 Msa0647800:intron 35.0%
ATGAAAGGATCTGCTGAATT+TGG - chr4_3:53918817-53918836 None:intergenic 35.0%
AGCAGATCCTTTCATGAATT+TGG + chr4_3:53918822-53918841 Msa0647800:CDS 35.0%
ATATCCTAAGGATTTCAGCT+CGG - chr4_3:53919000-53919019 None:intergenic 35.0%
AAATGATCTCCTTGTCAGTA+TGG - chr4_3:53919167-53919186 None:intergenic 35.0%
!!! GGAACTCTCTATTTTGATGT+TGG + chr4_3:53919259-53919278 Msa0647800:intron 35.0%
! TTCATTTCTTCAATGACGGA+TGG - chr4_3:53906462-53906481 None:intergenic 35.0%
ATCCGTCATTGAAGAAATGA+AGG + chr4_3:53906461-53906480 Msa0647800:five_prime_UTR 35.0%
GAAAGGATGAATGGATACTA+CGG + chr4_3:53919597-53919616 Msa0647800:CDS 35.0%
TATTTCATCATTCCCATTCC+TGG + chr4_3:53919647-53919666 Msa0647800:CDS 35.0%
CAACAACAAAGGATGCAACA+TGG + chr4_3:53903175-53903194 Msa0647800:five_prime_UTR 40.0%
! AGTGATGAGGAAGCATATTG+TGG + chr4_3:53903203-53903222 Msa0647800:five_prime_UTR 40.0%
ATAGAGGAAGCTTCTTAGCA+TGG + chr4_3:53903234-53903253 Msa0647800:five_prime_UTR 40.0%
TAGAGGAAGCTTCTTAGCAT+GGG + chr4_3:53903235-53903254 Msa0647800:five_prime_UTR 40.0%
GTTGGTCCTTTCCCAAAATT+TGG - chr4_3:53903281-53903300 None:intergenic 40.0%
TTGGGAAAGGACCAACTAAA+AGG + chr4_3:53903285-53903304 Msa0647800:five_prime_UTR 40.0%
TGCAAGTGTATCAAGCAAAG+TGG - chr4_3:53903387-53903406 None:intergenic 40.0%
ACTTTGCTTGATACACTTGC+AGG + chr4_3:53903386-53903405 Msa0647800:five_prime_UTR 40.0%
!!! AGGAGTGAGCAATTTTGGTT+GGG - chr4_3:53903519-53903538 None:intergenic 40.0%
!! TAGGAGTGAGCAATTTTGGT+TGG - chr4_3:53903520-53903539 None:intergenic 40.0%
CTTGAGTGCAGTTTGATGTT+AGG - chr4_3:53904041-53904060 None:intergenic 40.0%
GCCTATGTTCCAGAATCTAT+TGG - chr4_3:53904125-53904144 None:intergenic 40.0%
! GCGAAAAATGTGGTAATGAC+AGG + chr4_3:53904422-53904441 Msa0647800:five_prime_UTR 40.0%
ACAGGAAATGTTCTTCGCAA+TGG + chr4_3:53904440-53904459 Msa0647800:five_prime_UTR 40.0%
CAGGAAATGTTCTTCGCAAT+GGG + chr4_3:53904441-53904460 Msa0647800:five_prime_UTR 40.0%
CTTACAACAAAACCATAGCC+TGG - chr4_3:53904479-53904498 None:intergenic 40.0%
!! TAAGCCGCTGATTTCTTCTT+TGG - chr4_3:53904802-53904821 None:intergenic 40.0%
CAGATAGGCTAATAGGTAAC+TGG + chr4_3:53904862-53904881 Msa0647800:five_prime_UTR 40.0%
ATAGGTAACTGGCATTTGAG+AGG + chr4_3:53904873-53904892 Msa0647800:five_prime_UTR 40.0%
! TGGCATTTGAGAGGTATAAG+CGG + chr4_3:53904882-53904901 Msa0647800:five_prime_UTR 40.0%
TTGAGATTCTCACAAAGCCT+CGG + chr4_3:53904934-53904953 Msa0647800:five_prime_UTR 40.0%
AGTGCAAAGACTTCACTACT+TGG - chr4_3:53905077-53905096 None:intergenic 40.0%
! GATGACCTTTTCTTGCTTTC+TGG + chr4_3:53905101-53905120 Msa0647800:five_prime_UTR 40.0%
!!! TGTTGTGCAGTTTTTTGCTG+AGG + chr4_3:53905273-53905292 Msa0647800:intron 40.0%
! TCAGAAGGATTTCTTTTCCG+CGG - chr4_3:53905313-53905332 None:intergenic 40.0%
CATTGCATCAGCTACACTAA+AGG + chr4_3:53905366-53905385 Msa0647800:five_prime_UTR 40.0%
TGTGGCAACACTTATTCACA+TGG + chr4_3:53905809-53905828 Msa0647800:intron 40.0%
GCTGTAGCCAAATTCATGAA+AGG - chr4_3:53905886-53905905 None:intergenic 40.0%
TCGACTATCAGTTAAAGGTG+TGG - chr4_3:53906017-53906036 None:intergenic 40.0%
AATATGGAAGCCAAGCTAGT+TGG + chr4_3:53906163-53906182 Msa0647800:five_prime_UTR 40.0%
ATATGATCTCCTTGTCAGTG+TGG - chr4_3:53906202-53906221 None:intergenic 40.0%
ACACTGACAAGGAGATCATA+TGG + chr4_3:53906201-53906220 Msa0647800:intron 40.0%
AAATGATCTCCTTGTCAGTG+TGG - chr4_3:53906256-53906275 None:intergenic 40.0%
GTGAACATGTGTAGAGATGT+TGG + chr4_3:53906276-53906295 Msa0647800:five_prime_UTR 40.0%
! GTAGAGATGTTGGTTACTAC+TGG + chr4_3:53906286-53906305 Msa0647800:five_prime_UTR 40.0%
! ATGTTGGTTACTACTGGTTG+CGG + chr4_3:53906292-53906311 Msa0647800:five_prime_UTR 40.0%
ACCTGTAGTGCATTTATAGC+AGG + chr4_3:53906402-53906421 Msa0647800:five_prime_UTR 40.0%
TCCTGCTATAAATGCACTAC+AGG - chr4_3:53906406-53906425 None:intergenic 40.0%
ATGACCACCATATCAATTGG+AGG + chr4_3:53906432-53906451 Msa0647800:five_prime_UTR 40.0%
AAAGCCTCCAATTGATATGG+TGG - chr4_3:53906439-53906458 None:intergenic 40.0%
TGGAAAGCCTCCAATTGATA+TGG - chr4_3:53906442-53906461 None:intergenic 40.0%
AACACATAGTGCATGAATCC+TGG - chr4_3:53906836-53906855 None:intergenic 40.0%
!! AGTGATCGAGAGTATCATGA+TGG + chr4_3:53906886-53906905 Msa0647800:five_prime_UTR 40.0%
ACTTGTTCCAAATTTCCGCA+TGG + chr4_3:53906919-53906938 Msa0647800:five_prime_UTR 40.0%
CTTGTTCCAAATTTCCGCAT+GGG + chr4_3:53906920-53906939 Msa0647800:five_prime_UTR 40.0%
! GACTGTTGGTTGTTTATGCA+GGG + chr4_3:53907038-53907057 Msa0647800:intron 40.0%
TATGCAGGGAATCATGATGA+TGG + chr4_3:53907052-53907071 Msa0647800:intron 40.0%
TAGCAACCTAAAGAATCCAG+AGG - chr4_3:53907078-53907097 None:intergenic 40.0%
CATATATCAGTTATGGCGCA+TGG + chr4_3:53907135-53907154 Msa0647800:five_prime_UTR 40.0%
!! ATGTTTGGTTCCACTTTTGG+AGG - chr4_3:53907393-53907412 None:intergenic 40.0%
! TTAGGTTTTGCGCAAAGATG+TGG - chr4_3:53907659-53907678 None:intergenic 40.0%
CATCTTTGCGCAAAACCTAA+AGG + chr4_3:53907659-53907678 Msa0647800:intron 40.0%
AACTCCCAAATAGACCCTTT+AGG - chr4_3:53907677-53907696 None:intergenic 40.0%
AAGGGTCTATTTGGGAGTTT+AGG + chr4_3:53907678-53907697 Msa0647800:intron 40.0%
GTCTATTTGGGAGTTTAGGA+GGG + chr4_3:53907682-53907701 Msa0647800:intron 40.0%
TCTATTTGGGAGTTTAGGAG+GGG + chr4_3:53907683-53907702 Msa0647800:intron 40.0%
! GTATAGGAGAAGGATTTTGG+GGG + chr4_3:53907831-53907850 Msa0647800:intron 40.0%
! TATAGGAGAAGGATTTTGGG+GGG + chr4_3:53907832-53907851 Msa0647800:intron 40.0%
TTAGGCTCTATTTGAGAGTC+TGG - chr4_3:53908012-53908031 None:intergenic 40.0%
TCCCACATCAATTAGGAATG+AGG - chr4_3:53908068-53908087 None:intergenic 40.0%
! TGGTTAGTCCCACATCAATT+AGG - chr4_3:53908075-53908094 None:intergenic 40.0%
! TTTTGGATTTCAAGGGTGAG+TGG - chr4_3:53908095-53908114 None:intergenic 40.0%
AGTAGTAGTCCTTGTACTAC+AGG - chr4_3:53908218-53908237 None:intergenic 40.0%
TGAGTTTGATCCACTAATCC+CGG + chr4_3:53908645-53908664 Msa0647800:five_prime_UTR 40.0%
AATTAAGCCATTCCAAGTGG+TGG + chr4_3:53908719-53908738 Msa0647800:five_prime_UTR 40.0%
ATTAAGCCATTCCAAGTGGT+GGG + chr4_3:53908720-53908739 Msa0647800:five_prime_UTR 40.0%
! GATGGCATTTTCCTGAAAGA+TGG - chr4_3:53908880-53908899 None:intergenic 40.0%
! AATGCCATCTTTTCCTTCCT+AGG + chr4_3:53908891-53908910 Msa0647800:five_prime_UTR 40.0%
! GAATGAATTGGTTGATGCCT+AGG - chr4_3:53908911-53908930 None:intergenic 40.0%
TCTGGTTGTTCTTCTAGTAG+TGG - chr4_3:53908967-53908986 None:intergenic 40.0%
GTTGCCTTTGTGATAATCCA+GGG + chr4_3:53909759-53909778 Msa0647800:intron 40.0%
! CATTTATGAGGCTATTTCCC+TGG - chr4_3:53909779-53909798 None:intergenic 40.0%
GCCTAATAACGTTCCAAGTT+TGG + chr4_3:53910036-53910055 Msa0647800:intron 40.0%
! TTAGTTCTTGGTCTCTTCAC+CGG - chr4_3:53910070-53910089 None:intergenic 40.0%
TGAAGAGACCAAGAACTAAC+TGG + chr4_3:53910071-53910090 Msa0647800:intron 40.0%
!! TGGTTTTCTAGAAGAACGGT+TGG + chr4_3:53910291-53910310 Msa0647800:intron 40.0%
!! TTTTCTAGAAGAACGGTTGG+AGG + chr4_3:53910294-53910313 Msa0647800:intron 40.0%
AGAAATCCACTTTCATGCGT+TGG + chr4_3:53910529-53910548 Msa0647800:intron 40.0%
ATTTGTTTCGCCACTTCCAT+AGG - chr4_3:53910557-53910576 None:intergenic 40.0%
ATCTTGAGGATTACGTGAGT+AGG - chr4_3:53910615-53910634 None:intergenic 40.0%
GAGCACAATTGTCTTACAAG+AGG + chr4_3:53910657-53910676 Msa0647800:intron 40.0%
!! GAGAGTGTTTGTGAACTCAT+CGG + chr4_3:53911401-53911420 Msa0647800:intron 40.0%
! TGTTTGTGAACTCATCGGTT+CGG + chr4_3:53911406-53911425 Msa0647800:intron 40.0%
TACTAGTAGTGTGACCGATT+CGG - chr4_3:53911533-53911552 None:intergenic 40.0%
TTCTCATCTGCACCAGTAAT+GGG + chr4_3:53911562-53911581 Msa0647800:intron 40.0%
! TCTTTTGCGACTCTTGTAGA+AGG + chr4_3:53911836-53911855 Msa0647800:intron 40.0%
! CTTTTGCGACTCTTGTAGAA+GGG + chr4_3:53911837-53911856 Msa0647800:intron 40.0%
!! TTTGGTGTCTCTTATCTACG+TGG - chr4_3:53911894-53911913 None:intergenic 40.0%
TCAATTAGGTCCCTCATTCA+TGG + chr4_3:53912030-53912049 Msa0647800:intron 40.0%
CTTACAACAAAACCATGTGC+TGG - chr4_3:53912325-53912344 None:intergenic 40.0%
CATTTGCATGTACTCAGCTA+AGG + chr4_3:53912360-53912379 Msa0647800:intron 40.0%
TCACATGTACACCATACTTG+TGG - chr4_3:53912502-53912521 None:intergenic 40.0%
! GAGATTGGTAGCAACAACAA+AGG + chr4_3:53912775-53912794 Msa0647800:intron 40.0%
CAACAACAAAGGATGCAACA+TGG + chr4_3:53903175-53903194 Msa0647800:five_prime_UTR 40.0%
GTTGGTCCTTTCCCAAAATT+TGG - chr4_3:53903281-53903300 None:intergenic 40.0%
!! TTAAATGGTTTTGCTGAGCC+TGG + chr4_3:53912928-53912947 Msa0647800:CDS 40.0%
ATGATAGCCATGATTCTACC+AGG - chr4_3:53912949-53912968 None:intergenic 40.0%
TGGTAGAATCATGGCTATCA+TGG + chr4_3:53912948-53912967 Msa0647800:CDS 40.0%
GGTAGAATCATGGCTATCAT+GGG + chr4_3:53912949-53912968 Msa0647800:CDS 40.0%
TGCAAGTGAATCAAGCAAAG+TGG - chr4_3:53912995-53913014 None:intergenic 40.0%
ACTTTGCTTGATTCACTTGC+AGG + chr4_3:53912994-53913013 Msa0647800:intron 40.0%
CGAGTGAGAAACTCATAAGA+TGG - chr4_3:53913062-53913081 None:intergenic 40.0%
CATGCAAGAACCTCATAAGA+TGG + chr4_3:53913181-53913200 Msa0647800:intron 40.0%
TGGGTCTCATCACTTTATGT+GGG - chr4_3:53913455-53913474 None:intergenic 40.0%
AAAGTTGGGTCTGTGCATAT+AGG - chr4_3:53913854-53913873 None:intergenic 40.0%
TTCTATCTTCTGCTTGGACT+TGG + chr4_3:53913910-53913929 Msa0647800:intron 40.0%
TTGCACCATATGGCAAAGTT+GGG - chr4_3:53913982-53914001 None:intergenic 40.0%
!! AAAACTCATGTGGGCATTGA+CGG - chr4_3:53914107-53914126 None:intergenic 40.0%
! CAAATTAGGTCCTCTGCTTT+TGG + chr4_3:53914361-53914380 Msa0647800:intron 40.0%
TTAATTAGTGTCCTGGATGC+TGG - chr4_3:53914519-53914538 None:intergenic 40.0%
CTGTATGTAGTCAGTACATG+TGG - chr4_3:53914684-53914703 None:intergenic 40.0%
!! CAAATCCCAATTTTGGTGGT+TGG + chr4_3:53914720-53914739 Msa0647800:intron 40.0%
CAATCCCAACCACCAAAATT+GGG - chr4_3:53914728-53914747 None:intergenic 40.0%
ACAATCCCAACCACCAAAAT+TGG - chr4_3:53914729-53914748 None:intergenic 40.0%
!!! GAGCCTCATATTTTGACTTG+TGG + chr4_3:53914771-53914790 Msa0647800:intron 40.0%
TACGACACCAACACTTGTTT+AGG - chr4_3:53915177-53915196 None:intergenic 40.0%
GGCGACAACATTAAAGTAAG+TGG + chr4_3:53915622-53915641 Msa0647800:intron 40.0%
CCAATTAGACCAATCTATGG+TGG - chr4_3:53915865-53915884 None:intergenic 40.0%
!! CCACCATAGATTGGTCTAAT+TGG + chr4_3:53915862-53915881 Msa0647800:intron 40.0%
TATTGATGAAGAGGGATGCA+TGG + chr4_3:53916047-53916066 Msa0647800:intron 40.0%
CAGGACAAGCCTATGAATTA+AGG - chr4_3:53916089-53916108 None:intergenic 40.0%
!! CCTGACATGTGATTAGTTTC+GGG + chr4_3:53916105-53916124 Msa0647800:intron 40.0%
! CCAAAAAATGTGGTGATGAC+GGG + chr4_3:53916512-53916531 Msa0647800:CDS 40.0%
ACGGGAAATGTTCTTCTCAA+TGG + chr4_3:53916530-53916549 Msa0647800:CDS 40.0%
AATGATACAAAGGCAATCGG+AGG + chr4_3:53916911-53916930 Msa0647800:intron 40.0%
ATGATACAAAGGCAATCGGA+GGG + chr4_3:53916912-53916931 Msa0647800:intron 40.0%
TAACAACATCAGGCTGTCTT+TGG - chr4_3:53917209-53917228 None:intergenic 40.0%
CTCGTTGCTCTCATATATCA+TGG - chr4_3:53917236-53917255 None:intergenic 40.0%
AGATTCTACCATGTTCAGTG+AGG - chr4_3:53917282-53917301 None:intergenic 40.0%
!! TTCTATCCGTTGATGGTTGT+CGG + chr4_3:53917336-53917355 Msa0647800:intron 40.0%
GAAGTCAACAGCATAATCGA+TGG + chr4_3:53917714-53917733 Msa0647800:CDS 40.0%
TTAACCTATCTGCACAGTCT+TGG - chr4_3:53917761-53917780 None:intergenic 40.0%
GACTGTGCAGATAGGTTAAT+AGG + chr4_3:53917762-53917781 Msa0647800:intron 40.0%
ATAGGTAACTGGCATTTGAG+AGG + chr4_3:53904873-53904892 Msa0647800:five_prime_UTR 40.0%
! TGGCATTTGAGAGGTATAAG+CGG + chr4_3:53904882-53904901 Msa0647800:five_prime_UTR 40.0%
TTTCTTGATGAACCAACCTG+TGG + chr4_3:53917870-53917889 Msa0647800:CDS 40.0%
CTCAGAAATATCGCTCATGA+TGG + chr4_3:53917930-53917949 Msa0647800:CDS 40.0%
! GAAATATCGCTCATGATGGA+AGG + chr4_3:53917934-53917953 Msa0647800:CDS 40.0%
AGTGCAAAGACTTCACTGTT+AGG - chr4_3:53917984-53918003 None:intergenic 40.0%
CGTGGAGAAACTGTTTACTT+TGG + chr4_3:53918029-53918048 Msa0647800:CDS 40.0%
GATTTCTATTACGCGGACAA+GGG - chr4_3:53918215-53918234 None:intergenic 40.0%
CATCTTAGGAAGTGATCAGA+AGG - chr4_3:53918237-53918256 None:intergenic 40.0%
! TTATCCCGCTTAGGATCTTT+TGG + chr4_3:53918384-53918403 Msa0647800:intron 40.0%
TCTTCCAAAAGATCCTAAGC+GGG - chr4_3:53918391-53918410 None:intergenic 40.0%
CTCTTCCAAAAGATCCTAAG+CGG - chr4_3:53918392-53918411 None:intergenic 40.0%
GCTGTAGCCAAATTCATGAA+AGG - chr4_3:53905886-53905905 None:intergenic 40.0%
AGCAATTCTCCATACTGACA+AGG + chr4_3:53919155-53919174 Msa0647800:CDS 40.0%
GTGAACATGTGTCGAGATAT+TGG + chr4_3:53919187-53919206 Msa0647800:intron 40.0%
! GTCGAGATATTGGTTACTAC+TGG + chr4_3:53919197-53919216 Msa0647800:intron 40.0%
CTATAGCTATACCTCCATCT+TGG + chr4_3:53919282-53919301 Msa0647800:intron 40.0%
GAGCAATAACAACCAGGAAT+GGG - chr4_3:53919662-53919681 None:intergenic 40.0%
AGAGCAATAACAACCAGGAA+TGG - chr4_3:53919663-53919682 None:intergenic 40.0%
AAGTCAGAGCAATAACAACC+AGG - chr4_3:53919668-53919687 None:intergenic 40.0%
ATGGAGATTGAAGCAGCAAG+TGG + chr4_3:53903149-53903168 Msa0647800:five_prime_UTR 45.0%
GCAAGTGGTAGCAACAACAA+AGG + chr4_3:53903164-53903183 Msa0647800:five_prime_UTR 45.0%
!! CTAAATGGTTTTGCTGAGCC+TGG + chr4_3:53903320-53903339 Msa0647800:five_prime_UTR 45.0%
ATGGCTATTATGGGTCCTTC+TGG + chr4_3:53903350-53903369 Msa0647800:five_prime_UTR 45.0%
!!! CAGGTTGGGGTTATTTTGGT+CGG - chr4_3:53903549-53903568 None:intergenic 45.0%
GACCAAAATAACCCCAACCT+GGG + chr4_3:53903548-53903567 Msa0647800:intron 45.0%
!! AACCCAGGTTGGGGTTATTT+TGG - chr4_3:53903553-53903572 None:intergenic 45.0%
AAGGTGAGTTAACCCAGGTT+GGG - chr4_3:53903563-53903582 None:intergenic 45.0%
AACCTGGGTTAACTCACCTT+CGG + chr4_3:53903563-53903582 Msa0647800:intron 45.0%
CAACGTGAGTTAACTCACGT+TGG - chr4_3:53903592-53903611 None:intergenic 45.0%
TTGCTTCTGCAAAACCACCA+AGG + chr4_3:53903652-53903671 Msa0647800:intron 45.0%
AGCCTCTACTTTCATAGGGA+CGG - chr4_3:53903678-53903697 None:intergenic 45.0%
GTCGAGCCTCTACTTTCATA+GGG - chr4_3:53903682-53903701 None:intergenic 45.0%
AGTCGAGCCTCTACTTTCAT+AGG - chr4_3:53903683-53903702 None:intergenic 45.0%
! TTCTTGAGGCCCATCACTTT+TGG + chr4_3:53903961-53903980 Msa0647800:intron 45.0%
TCTTTGCACTCCCCAAAGAA+CGG + chr4_3:53904003-53904022 Msa0647800:intron 45.0%
GAGTGCAGTTTGATGTTAGG+TGG - chr4_3:53904038-53904057 None:intergenic 45.0%
!! AGGTCGACTTGCGAAAAATG+TGG + chr4_3:53904412-53904431 Msa0647800:intron 45.0%
GAAATCAGCGGCTTAGTTGA+TGG + chr4_3:53904807-53904826 Msa0647800:five_prime_UTR 45.0%
TTAGCCTATCTGCACAGTCT+TGG - chr4_3:53904854-53904873 None:intergenic 45.0%
GACTGTGCAGATAGGCTAAT+AGG + chr4_3:53904855-53904874 Msa0647800:five_prime_UTR 45.0%
! CATTTGAGAGGTATAAGCGG+CGG + chr4_3:53904885-53904904 Msa0647800:five_prime_UTR 45.0%
TCATCAAGAAACAGCAACCG+AGG - chr4_3:53904954-53904973 None:intergenic 45.0%
! GACCTTTTCTTGCTTTCTGG+TGG + chr4_3:53905104-53905123 Msa0647800:five_prime_UTR 45.0%
CTCCACCAGAAAGCAAGAAA+AGG - chr4_3:53905109-53905128 None:intergenic 45.0%
! GATTTCTTTTCCGCGGACAA+GGG - chr4_3:53905306-53905325 None:intergenic 45.0%
! TTTTACCCTTCTGGCATACG+TGG - chr4_3:53905947-53905966 None:intergenic 45.0%
!! CAGCGTCGACTATCAGTTAA+AGG - chr4_3:53906022-53906041 None:intergenic 45.0%
!! ATAAAGCACTGACGCAGACA+CGG - chr4_3:53906087-53906106 None:intergenic 45.0%
CATATGGAAGCCAAGCTAGT+TGG + chr4_3:53906217-53906236 Msa0647800:intron 45.0%
! TATACTTCCATCTTGGCTCG+TGG + chr4_3:53906378-53906397 Msa0647800:five_prime_UTR 45.0%
! TGGAGTAGCGGCATGTATTT+TGG + chr4_3:53906727-53906746 Msa0647800:five_prime_UTR 45.0%
AACATGGTGAAATTCAGGCC+AGG + chr4_3:53906815-53906834 Msa0647800:five_prime_UTR 45.0%
GTCATTCCCATGCGGAAATT+TGG - chr4_3:53906929-53906948 None:intergenic 45.0%
ACACATGTGGATCATGTGGT+AGG - chr4_3:53907006-53907025 None:intergenic 45.0%
! CGACTGTTGGTTGTTTATGC+AGG + chr4_3:53907037-53907056 Msa0647800:intron 45.0%
TGATGGCCTCTGGATTCTTT+AGG + chr4_3:53907069-53907088 Msa0647800:five_prime_UTR 45.0%
GCTATCTGATCTTCCAAAGC+CGG + chr4_3:53907094-53907113 Msa0647800:five_prime_UTR 45.0%
GAAATTGGATAGCGCCAAAC+CGG - chr4_3:53907116-53907135 None:intergenic 45.0%
TGGGTAAGTTCATGTAGACG+TGG + chr4_3:53907260-53907279 Msa0647800:intron 45.0%
GGGTAAGTTCATGTAGACGT+GGG + chr4_3:53907261-53907280 Msa0647800:intron 45.0%
! AACTCGTGATTCGGCTCATA+GGG - chr4_3:53907555-53907574 None:intergenic 45.0%
! AAACTCGTGATTCGGCTCAT+AGG - chr4_3:53907556-53907575 None:intergenic 45.0%
GGTCTATTTGGGAGTTTAGG+AGG + chr4_3:53907681-53907700 Msa0647800:intron 45.0%
! ATAACAGACTTTGAGAGGGG+AGG + chr4_3:53907747-53907766 Msa0647800:intron 45.0%
! GCTTTGGGTGGATGAATTAG+AGG - chr4_3:53907976-53907995 None:intergenic 45.0%
AGGAATGAGGAAATGTTGGG+TGG - chr4_3:53908055-53908074 None:intergenic 45.0%
ACATCAGAGCCTGTAGTACA+AGG + chr4_3:53908206-53908225 Msa0647800:intron 45.0%
TCCATTTCGTGTTCGTGTCA+GGG + chr4_3:53908477-53908496 Msa0647800:intron 45.0%
GAGTTTGATCCACTAATCCC+GGG + chr4_3:53908646-53908665 Msa0647800:five_prime_UTR 45.0%
GATGCCTAGGAAGGAAAAGA+TGG - chr4_3:53908898-53908917 None:intergenic 45.0%
! GAATTGGTTGATGCCTAGGA+AGG - chr4_3:53908907-53908926 None:intergenic 45.0%
GGTTGCCTTTGTGATAATCC+AGG + chr4_3:53909758-53909777 Msa0647800:intron 45.0%
! TCCAAGTTTGGATTGGAGAC+CGG + chr4_3:53910048-53910067 Msa0647800:intron 45.0%
TATCTCAAACCGGGAAGTGA+TGG + chr4_3:53910243-53910262 Msa0647800:intron 45.0%
! TTTTGGTCTCCATCACTTCC+CGG - chr4_3:53910255-53910274 None:intergenic 45.0%
ACATGTAGGGGACCATTGTT+TGG + chr4_3:53910410-53910429 Msa0647800:intron 45.0%
TAGGTACCAACGCATGAAAG+TGG - chr4_3:53910538-53910557 None:intergenic 45.0%
! CTTTCATGCGTTGGTACCTA+TGG + chr4_3:53910538-53910557 Msa0647800:intron 45.0%
ACGTAATCCTCAAGATAGCG+AGG + chr4_3:53910619-53910638 Msa0647800:intron 45.0%
CGTAATCCTCAAGATAGCGA+GGG + chr4_3:53910620-53910639 Msa0647800:intron 45.0%
CAATATCCCTCGCTATCTTG+AGG - chr4_3:53910629-53910648 None:intergenic 45.0%
! AAGATGGTTACGGATTGCCA+TGG + chr4_3:53910687-53910706 Msa0647800:intron 45.0%
! TACGGATTGCCATGGTTACT+AGG + chr4_3:53910695-53910714 Msa0647800:intron 45.0%
!! TTTCTGGAGCTTGTATGCCT+AGG + chr4_3:53910873-53910892 Msa0647800:intron 45.0%
GTATGCCTAGGAATGTGTGT+CGG + chr4_3:53910885-53910904 Msa0647800:intron 45.0%
TATGCCTAGGAATGTGTGTC+GGG + chr4_3:53910886-53910905 Msa0647800:intron 45.0%
CTTCTCATCTGCACCAGTAA+TGG + chr4_3:53911561-53911580 Msa0647800:intron 45.0%
GAGGGAATCCTTAATTAGGG+TGG + chr4_3:53911694-53911713 Msa0647800:intron 45.0%
GGGCTGGGCAAGAAAAATTA+AGG + chr4_3:53911857-53911876 Msa0647800:intron 45.0%
TTAGCGGTGTCTTAACATCC+AGG - chr4_3:53912127-53912146 None:intergenic 45.0%
CATTATCGCAGGTCTCTTAG+CGG - chr4_3:53912143-53912162 None:intergenic 45.0%
TTAGGCAGCATCATTATCGC+AGG - chr4_3:53912154-53912173 None:intergenic 45.0%
TGTGTGGTTGACCACAAGTA+TGG + chr4_3:53912488-53912507 Msa0647800:intron 45.0%
AGCGAGGATGAAGCATATTG+TGG + chr4_3:53912814-53912833 Msa0647800:CDS 45.0%
TTGGGAAAGGACCAACCAAA+AGG + chr4_3:53912893-53912912 Msa0647800:CDS 45.0%
GTGGGTCTCATCACTTTATG+TGG - chr4_3:53913456-53913475 None:intergenic 45.0%
! ATTTTGAACCCCTTGACCCA+GGG - chr4_3:53913499-53913518 None:intergenic 45.0%
! AATTTTGAACCCCTTGACCC+AGG - chr4_3:53913500-53913519 None:intergenic 45.0%
TTGACATTGTTGGGGAGTCT+AGG - chr4_3:53913598-53913617 None:intergenic 45.0%
ACAGACCCAACTTTGCCATA+TGG + chr4_3:53913974-53913993 Msa0647800:intron 45.0%
CTTGCACCATATGGCAAAGT+TGG - chr4_3:53913983-53914002 None:intergenic 45.0%
CAACTTTGCCATATGGTGCA+AGG + chr4_3:53913981-53914000 Msa0647800:intron 45.0%
TCTTATTCAATTGGCAGGGC+CGG + chr4_3:53914190-53914209 Msa0647800:intron 45.0%
TGCAAACTGCTCAATGGAGT+CGG + chr4_3:53914224-53914243 Msa0647800:intron 45.0%
!!! AGGTCCTCTGCTTTTGGTTT+AGG + chr4_3:53914367-53914386 Msa0647800:intron 45.0%
!!! TCCTCTGCTTTTGGTTTAGG+TGG + chr4_3:53914370-53914389 Msa0647800:intron 45.0%
TCCACCTAAACCAAAAGCAG+AGG - chr4_3:53914374-53914393 None:intergenic 45.0%
TGTTCTCTTAACCAGCATCC+AGG + chr4_3:53914505-53914524 Msa0647800:intron 45.0%
AGTCAGTACATGTGGACCAT+CGG - chr4_3:53914676-53914695 None:intergenic 45.0%
CCCGAAACTAATCACATGTC+AGG - chr4_3:53916108-53916127 None:intergenic 45.0%
!!! CCCGTCATCACCACATTTTT+TGG - chr4_3:53916515-53916534 None:intergenic 45.0%
! CAGCTGATAGATGACGGTTA+AGG - chr4_3:53916858-53916877 None:intergenic 45.0%
GTGTTGCAGCTGATAGATGA+CGG - chr4_3:53916864-53916883 None:intergenic 45.0%
GCTTGTTTCCTCACTGAACA+TGG + chr4_3:53917271-53917290 Msa0647800:intron 45.0%
! CATTTGAGAGGTATAAGCGG+CGG + chr4_3:53904885-53904904 Msa0647800:five_prime_UTR 45.0%
!! AGAAGCACTATCTAAGCCAC+AGG - chr4_3:53917889-53917908 None:intergenic 45.0%
TGAAGCCAAAATGGCAATCG+AGG + chr4_3:53918052-53918071 Msa0647800:CDS 45.0%
!!! GTGCAGTTTTTTGCTGAAGC+TGG + chr4_3:53918186-53918205 Msa0647800:intron 45.0%
GGATTTCTATTACGCGGACA+AGG - chr4_3:53918216-53918235 None:intergenic 45.0%
AGCGTTCAACGTATGCAAGT+AGG + chr4_3:53918884-53918903 Msa0647800:CDS 45.0%
GCGTTCAACGTATGCAAGTA+GGG + chr4_3:53918885-53918904 Msa0647800:CDS 45.0%
TATGCCGAGCTGAAATCCTT+AGG + chr4_3:53918993-53919012 Msa0647800:intron 45.0%
ACTATGGAAGCCAAGCTAGT+TGG + chr4_3:53919128-53919147 Msa0647800:CDS 45.0%
ATTGCTTCCACCAACTAGCT+TGG - chr4_3:53919141-53919160 None:intergenic 45.0%
TCCTGTTACAAATGCACCAC+AGG - chr4_3:53919317-53919336 None:intergenic 45.0%
TGGCAAGCTTCCAATTGAGA+TGG - chr4_3:53919350-53919369 None:intergenic 45.0%
!!! TTAAAATTTGTTTAAAATAT+AGG - chr4_3:53914610-53914629 None:intergenic 5.0%
!! AATATTTATTATATCTTATA+TGG + chr4_3:53918079-53918098 Msa0647800:intron 5.0%
CAACATGGACGAGAGTGATG+AGG + chr4_3:53903190-53903209 Msa0647800:five_prime_UTR 50.0%
TGCTGAGCCTGGTAGAATCA+TGG + chr4_3:53903331-53903350 Msa0647800:five_prime_UTR 50.0%
!! ATTATGGGTCCTTCTGGCTC+TGG + chr4_3:53903356-53903375 Msa0647800:five_prime_UTR 50.0%
! GTGGATTTTCCAGAGCCAGA+AGG - chr4_3:53903368-53903387 None:intergenic 50.0%
CGACCAAAATAACCCCAACC+TGG + chr4_3:53903547-53903566 Msa0647800:intron 50.0%
AGGTGAGTTAACCCAGGTTG+GGG - chr4_3:53903562-53903581 None:intergenic 50.0%
GAAGGTGAGTTAACCCAGGT+TGG - chr4_3:53903564-53903583 None:intergenic 50.0%
! ACTCACGTTGGTTACACCGA+AGG - chr4_3:53903582-53903601 None:intergenic 50.0%
TACTTTCATAGGGACGGCCT+TGG - chr4_3:53903672-53903691 None:intergenic 50.0%
!! TTGAGGCCCATCACTTTTGG+AGG + chr4_3:53903964-53903983 Msa0647800:intron 50.0%
!! GTTTTCAGGGCCGTTCTTTG+GGG - chr4_3:53904016-53904035 None:intergenic 50.0%
!! GGTTTTCAGGGCCGTTCTTT+GGG - chr4_3:53904017-53904036 None:intergenic 50.0%
!! TGGTTTTCAGGGCCGTTCTT+TGG - chr4_3:53904018-53904037 None:intergenic 50.0%
GTCTCCAAGACTGTGCAGAT+AGG + chr4_3:53904847-53904866 Msa0647800:five_prime_UTR 50.0%
GCACTGTCTAAGCCACTAGT+TGG - chr4_3:53904978-53904997 None:intergenic 50.0%
CTTAGAAGTCTCGCTCGTGA+TGG + chr4_3:53905023-53905042 Msa0647800:five_prime_UTR 50.0%
!!! GTGCAGTTTTTTGCTGAGGC+TGG + chr4_3:53905277-53905296 Msa0647800:intron 50.0%
! GGATTTCTTTTCCGCGGACA+AGG - chr4_3:53905307-53905326 None:intergenic 50.0%
ATGGAAGCCAAGCTAGTTGG+TGG + chr4_3:53906166-53906185 Msa0647800:five_prime_UTR 50.0%
GTTGCTTCCACCAACTAGCT+TGG - chr4_3:53906176-53906195 None:intergenic 50.0%
AGCAACTGTCCACACTGACA+AGG + chr4_3:53906190-53906209 Msa0647800:five_prime_UTR 50.0%
ATGGAAGCCAAGCTAGTTGG+TGG + chr4_3:53906166-53906185 Msa0647800:five_prime_UTR 50.0%
GTTGCTTCCACCAACTAGCT+TGG - chr4_3:53906176-53906195 None:intergenic 50.0%
AGCAACTGTCCACACTGACA+AGG + chr4_3:53906190-53906209 Msa0647800:five_prime_UTR 50.0%
TTCCGCATGGGAATGACGAT+AGG + chr4_3:53906932-53906951 Msa0647800:five_prime_UTR 50.0%
CTCCTATCGTCATTCCCATG+CGG - chr4_3:53906937-53906956 None:intergenic 50.0%
ATGGGAATGACGATAGGAGC+TGG + chr4_3:53906938-53906957 Msa0647800:five_prime_UTR 50.0%
!! GGAATCATGATGATGGCCTC+TGG + chr4_3:53907059-53907078 Msa0647800:five_prime_UTR 50.0%
CTGATCTTCCAAAGCCGGTT+TGG + chr4_3:53907099-53907118 Msa0647800:five_prime_UTR 50.0%
! ACTCGTGATTCGGCTCATAG+GGG - chr4_3:53907554-53907573 None:intergenic 50.0%
! CATTTGTTGGGGAGACCGAT+GGG + chr4_3:53907581-53907600 Msa0647800:intron 50.0%
! TGCGCAAAGATGTGGTGTCA+AGG - chr4_3:53907651-53907670 None:intergenic 50.0%
ATTTGGGAGTTTAGGAGGGG+AGG + chr4_3:53907686-53907705 Msa0647800:intron 50.0%
TTTGGGAGTTTAGGAGGGGA+GGG + chr4_3:53907687-53907706 Msa0647800:intron 50.0%
! ACTTTGAGAGGGGAGGACTT+GGG + chr4_3:53907754-53907773 Msa0647800:intron 50.0%
!! GAGAAGGATTTTGGGGGGTT+TGG + chr4_3:53907837-53907856 Msa0647800:intron 50.0%
GGCTCTATTTGAGAGTCTGG+AGG - chr4_3:53908009-53908028 None:intergenic 50.0%
GTCCATTTCGTGTTCGTGTC+AGG + chr4_3:53908476-53908495 Msa0647800:intron 50.0%
ACCCTGACACGAACACGAAA+TGG - chr4_3:53908481-53908500 None:intergenic 50.0%
!! CTGTCAATTTTGGGTCACCC+GGG - chr4_3:53908666-53908685 None:intergenic 50.0%
!! CCTGTCAATTTTGGGTCACC+CGG - chr4_3:53908667-53908686 None:intergenic 50.0%
CTAAGTCCCACCACTTGGAA+TGG - chr4_3:53908729-53908748 None:intergenic 50.0%
! CATTCCAAGTGGTGGGACTT+AGG + chr4_3:53908727-53908746 Msa0647800:five_prime_UTR 50.0%
ACCGGTCTCCAATCCAAACT+TGG - chr4_3:53910052-53910071 None:intergenic 50.0%
TTTAATGCCCCGGCACATGT+AGG + chr4_3:53910396-53910415 Msa0647800:intron 50.0%
TTAATGCCCCGGCACATGTA+GGG + chr4_3:53910397-53910416 Msa0647800:intron 50.0%
AGGGGACCATTGTTTGGATC+AGG + chr4_3:53910416-53910435 Msa0647800:intron 50.0%
! TGCGTTGGTACCTATGGAAG+TGG + chr4_3:53910544-53910563 Msa0647800:intron 50.0%
GAAACCCGACACACATTCCT+AGG - chr4_3:53910893-53910912 None:intergenic 50.0%
TGTGGGGTCCACCCTAATTA+AGG - chr4_3:53911705-53911724 None:intergenic 50.0%
TCGCAAAAGACACCGTCTCT+TGG - chr4_3:53911826-53911845 None:intergenic 50.0%
TGCTGAGCCTGGTAGAATCA+TGG + chr4_3:53903331-53903350 Msa0647800:five_prime_UTR 50.0%
ATGGCTATCATGGGTCCTTC+TGG + chr4_3:53912958-53912977 Msa0647800:intron 50.0%
! GTGGATTTTCCAGAGCCAGA+AGG - chr4_3:53903368-53903387 None:intergenic 50.0%
CTCACTCGCCCTATGCATTT+CGG + chr4_3:53913074-53913093 Msa0647800:intron 50.0%
TTTAGGCTCATACCTTGGGG+AGG - chr4_3:53914251-53914270 None:intergenic 50.0%
TGGAAACTTGGGGAGTAGTG+GGG - chr4_3:53914307-53914326 None:intergenic 50.0%
GTGGAAACTTGGGGAGTAGT+GGG - chr4_3:53914308-53914327 None:intergenic 50.0%
TGTGGAAACTTGGGGAGTAG+TGG - chr4_3:53914309-53914328 None:intergenic 50.0%
! GTTCGTCCAACTTGTTCCGA+TGG + chr4_3:53914657-53914676 Msa0647800:intron 50.0%
TGTGGACCATCGGAACAAGT+TGG - chr4_3:53914666-53914685 None:intergenic 50.0%
TGATGAAGAGGGATGCATGG+AGG + chr4_3:53916050-53916069 Msa0647800:intron 50.0%
CGTCTACCGACAACCATCAA+CGG - chr4_3:53917345-53917364 None:intergenic 50.0%
GTCTCCAAGACTGTGCAGAT+AGG + chr4_3:53904847-53904866 Msa0647800:five_prime_UTR 50.0%
GCACTATCTAAGCCACAGGT+TGG - chr4_3:53917885-53917904 None:intergenic 50.0%
GATGACGCTGACATAGACAC+CGG - chr4_3:53919045-53919064 None:intergenic 50.0%
ATGGAAGCCAAGCTAGTTGG+TGG + chr4_3:53906166-53906185 Msa0647800:five_prime_UTR 50.0%
! TATACCTCCATCTTGGCTCG+CGG + chr4_3:53919289-53919308 Msa0647800:CDS 50.0%
GCCTGTGGTGCATTTGTAAC+AGG + chr4_3:53919313-53919332 Msa0647800:CDS 50.0%
CACCGAAGGTGAGTTAACCC+AGG - chr4_3:53903568-53903587 None:intergenic 55.0%
TTTCATAGGGACGGCCTTGG+TGG - chr4_3:53903669-53903688 None:intergenic 55.0%
GGCCGTCCCTATGAAAGTAG+AGG + chr4_3:53903673-53903692 Msa0647800:intron 55.0%
GCTGGGCCTCCAAAAGTGAT+GGG - chr4_3:53903973-53903992 None:intergenic 55.0%
AGCTGGGCCTCCAAAAGTGA+TGG - chr4_3:53903974-53903993 None:intergenic 55.0%
!! TCACTTTTGGAGGCCCAGCT+CGG + chr4_3:53903974-53903993 Msa0647800:intron 55.0%
GCAAAGAGCTCAACCGAGCT+GGG - chr4_3:53903990-53904009 None:intergenic 55.0%
TGCAAAGAGCTCAACCGAGC+TGG - chr4_3:53903991-53904010 None:intergenic 55.0%
! GAAGTCTCGCTCGTGATGGA+AGG + chr4_3:53905027-53905046 Msa0647800:five_prime_UTR 55.0%
GCGTTCCACGTATGCCAGAA+GGG + chr4_3:53905939-53905958 Msa0647800:five_prime_UTR 55.0%
ACTGACGCAGACACGGATAC+TGG - chr4_3:53906080-53906099 None:intergenic 55.0%
TTATGGCGCATGGGCAATGC+AGG + chr4_3:53907145-53907164 Msa0647800:five_prime_UTR 55.0%
CCATCGGTCTCCCCAACAAA+TGG - chr4_3:53907583-53907602 None:intergenic 55.0%
! CCATTTGTTGGGGAGACCGA+TGG + chr4_3:53907580-53907599 Msa0647800:intron 55.0%
TGTTCACTTCGGACGCCCAT+CGG - chr4_3:53907599-53907618 None:intergenic 55.0%
TTGGGAGTTTAGGAGGGGAG+GGG + chr4_3:53907688-53907707 Msa0647800:intron 55.0%
! GACTTTGAGAGGGGAGGACT+TGG + chr4_3:53907753-53907772 Msa0647800:intron 55.0%
! CTTTGAGAGGGGAGGACTTG+GGG + chr4_3:53907755-53907774 Msa0647800:intron 55.0%
TTGAGAGTCTGGAGGCGAGA+GGG - chr4_3:53908001-53908020 None:intergenic 55.0%
TTTGAGAGTCTGGAGGCGAG+AGG - chr4_3:53908002-53908021 None:intergenic 55.0%
TTTGGGTCACCCGGGATTAG+TGG - chr4_3:53908658-53908677 None:intergenic 55.0%
CCGGGTGACCCAAAATTGAC+AGG + chr4_3:53908664-53908683 Msa0647800:five_prime_UTR 55.0%
AGCACCTAAGTCCCACCACT+TGG - chr4_3:53908734-53908753 None:intergenic 55.0%
CTGCAACACCCCTCCAAAGT+TGG + chr4_3:53910004-53910023 Msa0647800:intron 55.0%
TAATGCCCCGGCACATGTAG+GGG + chr4_3:53910398-53910417 Msa0647800:intron 55.0%
AATGGTCCCCTACATGTGCC+GGG - chr4_3:53910407-53910426 None:intergenic 55.0%
CAATGGTCCCCTACATGTGC+CGG - chr4_3:53910408-53910427 None:intergenic 55.0%
TGCGACTCTTGTAGAAGGGC+TGG + chr4_3:53911841-53911860 Msa0647800:intron 55.0%
GCGACTCTTGTAGAAGGGCT+GGG + chr4_3:53911842-53911861 Msa0647800:intron 55.0%
ATGCAACATGGACGAGAGCG+AGG + chr4_3:53912798-53912817 Msa0647800:CDS 55.0%
!! ATCATGGGTCCTTCTGGCTC+TGG + chr4_3:53912964-53912983 Msa0647800:intron 55.0%
GTGATGAGACCCACATGCAG+TGG + chr4_3:53913462-53913481 Msa0647800:intron 55.0%
!! GAGTCTAGGAGCGTTTGGAG+CGG - chr4_3:53913584-53913603 None:intergenic 55.0%
!! TTGGGGAGTCTAGGAGCGTT+TGG - chr4_3:53913589-53913608 None:intergenic 55.0%
! GCATTGACGGAGCCACATAG+TGG - chr4_3:53914094-53914113 None:intergenic 55.0%
AGTTTGCACACCCCAAGGTC+CGG - chr4_3:53914212-53914231 None:intergenic 55.0%
TGAGCAGTTTGCACACCCCA+AGG - chr4_3:53914217-53914236 None:intergenic 55.0%
GGGGTGTGCAAACTGCTCAA+TGG + chr4_3:53914218-53914237 Msa0647800:intron 55.0%
GTCGTCACCCGTGTACCATT+TGG + chr4_3:53916408-53916427 Msa0647800:intron 55.0%
! GACCTTTTCTTGCTCGCTCG+TGG + chr4_3:53918011-53918030 Msa0647800:CDS 55.0%
CTCCACGAGCGAGCAAGAAA+AGG - chr4_3:53918016-53918035 None:intergenic 55.0%
GAGGTATAAGCGGCGGCGAA+AGG + chr4_3:53904892-53904911 Msa0647800:five_prime_UTR 60.0%
!! AGGCTGGTTTCCCTTGTCCG+CGG + chr4_3:53905293-53905312 Msa0647800:five_prime_UTR 60.0%
GGCGTTCCACGTATGCCAGA+AGG + chr4_3:53905938-53905957 Msa0647800:five_prime_UTR 60.0%
! ACAGGTGCCACGAGCCAAGA+TGG - chr4_3:53906388-53906407 None:intergenic 60.0%
! GGATAGCGCCAAACCGGCTT+TGG - chr4_3:53907110-53907129 None:intergenic 60.0%
TGAGAGTCTGGAGGCGAGAG+GGG - chr4_3:53908000-53908019 None:intergenic 60.0%
ATGGTCCCCTACATGTGCCG+GGG - chr4_3:53910406-53910425 None:intergenic 60.0%
CTGGCAACGCCACTGCATGT+GGG - chr4_3:53913474-53913493 None:intergenic 60.0%
TTGCCAGGACCCTGGGTCAA+GGG + chr4_3:53913487-53913506 Msa0647800:intron 60.0%
! GAAGGTGCAGTTGAACCCCC+TGG + chr4_3:53914068-53914087 Msa0647800:intron 60.0%
TGAACCCCCTGGCCACTATG+TGG + chr4_3:53914079-53914098 Msa0647800:intron 60.0%
ACGGAGCCACATAGTGGCCA+GGG - chr4_3:53914088-53914107 None:intergenic 60.0%
AATTGGCAGGGCCGGACCTT+GGG + chr4_3:53914198-53914217 Msa0647800:intron 60.0%
AATGGAGTCGGACCTCCCCA+AGG + chr4_3:53914236-53914255 Msa0647800:intron 60.0%
GAGGTATAAGCGGCGGCGAA+AGG + chr4_3:53904892-53904911 Msa0647800:five_prime_UTR 60.0%
GGAGTTTAGGAGGGGAGGGG+AGG + chr4_3:53907691-53907710 Msa0647800:intron 65.0%
GGAGGCGAGAGGGGAGCTTT+GGG - chr4_3:53907991-53908010 None:intergenic 65.0%
TGGAGGCGAGAGGGGAGCTT+TGG - chr4_3:53907992-53908011 None:intergenic 65.0%
CCTGGCAACGCCACTGCATG+TGG - chr4_3:53913475-53913494 None:intergenic 65.0%
CCACATGCAGTGGCGTTGCC+AGG + chr4_3:53913472-53913491 Msa0647800:intron 65.0%
AGTGGCGTTGCCAGGACCCT+GGG + chr4_3:53913480-53913499 Msa0647800:intron 65.0%
GTTGCCAGGACCCTGGGTCA+AGG + chr4_3:53913486-53913505 Msa0647800:intron 65.0%
TGCCAGGACCCTGGGTCAAG+GGG + chr4_3:53913488-53913507 Msa0647800:intron 65.0%
AACCCCTTGACCCAGGGTCC+TGG - chr4_3:53913493-53913512 None:intergenic 65.0%
GGAGCCACATAGTGGCCAGG+GGG - chr4_3:53914086-53914105 None:intergenic 65.0%
CGGAGCCACATAGTGGCCAG+GGG - chr4_3:53914087-53914106 None:intergenic 65.0%
GACGGAGCCACATAGTGGCC+AGG - chr4_3:53914089-53914108 None:intergenic 65.0%
CAATTGGCAGGGCCGGACCT+TGG + chr4_3:53914197-53914216 Msa0647800:intron 65.0%
ATTGGCAGGGCCGGACCTTG+GGG + chr4_3:53914199-53914218 Msa0647800:intron 65.0%
! ACAGGCACCGCGAGCCAAGA+TGG - chr4_3:53919299-53919318 None:intergenic 65.0%
! ATCTTGGCTCGCGGTGCCTG+TGG + chr4_3:53919298-53919317 Msa0647800:CDS 65.0%
!! GGCGAGAGGGGAGCTTTGGG+TGG - chr4_3:53907988-53908007 None:intergenic 70.0%
CAGTGGCGTTGCCAGGACCC+TGG + chr4_3:53913479-53913498 Msa0647800:intron 70.0%
GGCACCGCGAGCCAAGATGG+AGG - chr4_3:53919296-53919315 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 53902962 53919706 53902962 ID=Msa0647800;Name=Msa0647800
chr4_3 mRNA 53902962 53919706 53902962 ID=Msa0647800-mRNA-1;Parent=Msa0647800;Name=Msa0647800-mRNA-1;_AED=0.17;_eAED=0.19;_QI=2518|0.68|0.6|1|0.68|0.55|20|0|416
chr4_3 exon 53902962 53903407 53902962 ID=Msa0647800-mRNA-1:exon:13549;Parent=Msa0647800-mRNA-1
chr4_3 exon 53904414 53904493 53904414 ID=Msa0647800-mRNA-1:exon:13550;Parent=Msa0647800-mRNA-1
chr4_3 exon 53904705 53905166 53904705 ID=Msa0647800-mRNA-1:exon:13551;Parent=Msa0647800-mRNA-1
chr4_3 exon 53905283 53905405 53905283 ID=Msa0647800-mRNA-1:exon:13552;Parent=Msa0647800-mRNA-1
chr4_3 exon 53905862 53905993 53905862 ID=Msa0647800-mRNA-1:exon:13553;Parent=Msa0647800-mRNA-1
chr4_3 exon 53906141 53906211 53906141 ID=Msa0647800-mRNA-1:exon:13554;Parent=Msa0647800-mRNA-1
chr4_3 exon 53906266 53906482 53906266 ID=Msa0647800-mRNA-1:exon:13555;Parent=Msa0647800-mRNA-1
chr4_3 exon 53906695 53906967 53906695 ID=Msa0647800-mRNA-1:exon:13556;Parent=Msa0647800-mRNA-1
chr4_3 exon 53907059 53907166 53907059 ID=Msa0647800-mRNA-1:exon:13557;Parent=Msa0647800-mRNA-1
chr4_3 exon 53908616 53909230 53908616 ID=Msa0647800-mRNA-1:exon:13558;Parent=Msa0647800-mRNA-1
chr4_3 exon 53912778 53912970 53912778 ID=Msa0647800-mRNA-1:exon:13559;Parent=Msa0647800-mRNA-1
chr4_3 exon 53916504 53916583 53916504 ID=Msa0647800-mRNA-1:exon:13560;Parent=Msa0647800-mRNA-1
chr4_3 exon 53917612 53917753 53917612 ID=Msa0647800-mRNA-1:exon:13561;Parent=Msa0647800-mRNA-1
chr4_3 exon 53917784 53917959 53917784 ID=Msa0647800-mRNA-1:exon:13562;Parent=Msa0647800-mRNA-1
chr4_3 exon 53917981 53918073 53917981 ID=Msa0647800-mRNA-1:exon:13563;Parent=Msa0647800-mRNA-1
chr4_3 exon 53918192 53918314 53918192 ID=Msa0647800-mRNA-1:exon:13564;Parent=Msa0647800-mRNA-1
chr4_3 exon 53918808 53918939 53918808 ID=Msa0647800-mRNA-1:exon:13565;Parent=Msa0647800-mRNA-1
chr4_3 exon 53919106 53919194 53919106 ID=Msa0647800-mRNA-1:exon:13566;Parent=Msa0647800-mRNA-1
chr4_3 exon 53919288 53919390 53919288 ID=Msa0647800-mRNA-1:exon:13567;Parent=Msa0647800-mRNA-1
chr4_3 exon 53919596 53919706 53919596 ID=Msa0647800-mRNA-1:exon:13568;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53902962 53903407 53902962 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53904414 53904493 53904414 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53904705 53905166 53904705 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53905283 53905405 53905283 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53905862 53905993 53905862 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53906141 53906211 53906141 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53906266 53906482 53906266 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53906695 53906967 53906695 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53907059 53907166 53907059 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 five_prime_UTR 53908616 53909221 53908616 ID=Msa0647800-mRNA-1:five_prime_utr;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53909222 53909230 53909222 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53912778 53912970 53912778 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53916504 53916583 53916504 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53917612 53917753 53917612 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53917784 53917959 53917784 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53917981 53918073 53917981 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53918192 53918314 53918192 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53918808 53918939 53918808 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53919106 53919194 53919106 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53919288 53919390 53919288 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
chr4_3 CDS 53919596 53919706 53919596 ID=Msa0647800-mRNA-1:cds;Parent=Msa0647800-mRNA-1
Gene Sequence

>Msa0647800

ATGGTAATTATTGGTAGCAACAACAAAGGATGCAACATGGACGAGAGCGAGGATGAAGCATATTGTGGTCTTAATAGAGGAAGCTTTTTAGCATGGGAAGATGTAAGAGTTATGTTGCCAAATTTTGGGAAAGGACCAACCAAAAGGTTACTTAATGGGTTAAATGGTTTTGCTGAGCCTGGTAGAATCATGGCTATCATGGGTAGACTTCCAAAAAATGTGGTGATGACGGGAAATGTTCTTCTCAATGGAAAGAAAAAAATTCCGAACTATGGTTTTGTTGCATACGTAACACAAGAAGATGTGTTGTTAGGAACTCTTACAGTGAAAGAAACGATAACATATTCAGCACATTTACGTCTTCCATCAACAATGTCCAAAGAAGAAGTCAACAGCATAATCGATGGAACAATCATAGAAATGGGTAACTGGCATTTGAGAGGTATAAGCGGCGGCGAAAGGAAAAGAACTAGCATTGCACTTGAGATTCTCACAAAGCCTCGTTTGTTGTTTCTTGATGAACCAACCTGTGGCTTAGATAGTGCTTCTGCATTTTTTGTTGTTCAAACTCTCAGAAATATCGCTCATGATGGAAGGACTCCTAACAGTGAAGTCTTTGCACTTTTTGATGACCTTTTCTTGCTCGCTCGTGGAGAAACTGTTTACTTTGGTGAAGCCAAAATGGCAATCGAGTTTTTTGCTGAAGCTGGTTTCCCTTGTCCGCGTAATAGAAATCCTTCTGATCACTTCCTAAGATGTATCAATTCTGATTTCGATGTTGTAACGGCTATACTAAAGGGGTCTCAAAGAATTCATGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCACAGATTAAGTCAATGCTAGTCGAGAAATTTCAGCGTTCAACGTATGCAAGTAGGGTAAAAGACAAGATTCAAGAACAATCAACCAATAAAGGGCTTGAAACTGAGATAAACTATGGAAGCCAAGCTAGTTGGTGGAAGCAATTCTCCATACTGACAAGGAGATCATTTGTGAACATCTATACCTCCATCTTGGCTCGCGGTGCCTGTGGTGCATTTGTAACAGGATTTATGACTACCATCTCAATTGGAAGCTTGCCATCCGTCATTGAAGAAATGAAGAGAAAGGATGAATGGATACTACGGAGTAGCAGCCTATATTTTAGCAAACTTTATTTCATCATTCCCATTCCTGGTTGTTATTGCTCTGACTTCTTGCACAATCACATATAA
Protein sequence

>Msa0647800

MVIIGSNNKGCNMDESEDEAYCGLNRGSFLAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGRLPKNVVMTGNVLLNGKKKIPNYGFVAYVTQEDVLLGTLTVKETITYSAHLRLPSTMSKEEVNSIIDGTIIEMGNWHLRGISGGERKRTSIALEILTKPRLLFLDEPTCGLDSASAFFVVQTLRNIAHDGRTPNSEVFALFDDLFLLARGETVYFGEAKMAIEFFAEAGFPCPRNRNPSDHFLRCINSDFDVVTAILKGSQRIHDVPNSADPFMNLATAQIKSMLVEKFQRSTYASRVKDKIQEQSTNKGLETEINYGSQASWWKQFSILTRRSFVNIYTSILARGACGAFVTGFMTTISIGSLPSVIEEMKRKDEWILRSSSLYFSKLYFIIPIPGCYCSDFLHNHI*