AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0408640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 95 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGGAGGAGGTGGTGGTTT+TGG 0.204853 3_2:+48569162 Msa0408640:CDS
GGTGGTGTTGGTGGAGGATC+AGG 0.249825 3_2:+48569318 Msa0408640:CDS
GGAGGTGGTGGAGGAGGATT+TGG 0.266423 3_2:+48569396 Msa0408640:CDS
TTTGGTGGAGGTGCAGGAGG+AGG 0.290797 3_2:+48569150 Msa0408640:CDS
GGTGGTGCTGGAGGTGGAGT+TGG 0.296874 3_2:+48569471 Msa0408640:CDS
GGTGGCTCTGGAGGTGGATT+TGG 0.297750 3_2:+48569216 Msa0408640:CDS
GGAGGAGGTGGTGGTGGATT+TGG 0.299482 3_2:+48569288 Msa0408640:CDS
GGTGGTGGACTTGGTGGTGC+TGG 0.301349 3_2:+48569429 Msa0408640:CDS
GGTGGTGGTGGTAGTGGAGG+AGG 0.308534 3_2:+48569186 Msa0408640:CDS
GGAGGATTTGGAGGTGGTGG+TGG 0.310710 3_2:+48569408 Msa0408640:CDS
GGATTTGGAGGTGGTGGTGG+TGG 0.313784 3_2:+48569411 Msa0408640:CDS
GGTGGATTTGGTGCTGGTGC+TGG 0.316862 3_2:+48569228 Msa0408640:CDS
TTTGGAGGAGGATCAGGATT+TGG 0.317441 3_2:+48569342 Msa0408640:CDS
GGTGGTAGTGGAGGAGGGTT+AGG 0.320538 3_2:+48569192 Msa0408640:CDS
GCTGGATCCGGTGGAGGATT+TGG 0.329266 3_2:+48569447 Msa0408640:CDS
GGAGGATTTGGTGGTGGTGC+TGG 0.331213 3_2:+48569459 Msa0408640:CDS
TTTGGTGGTGGTGCTGGAGG+TGG 0.331845 3_2:+48569465 Msa0408640:CDS
GGTGGTTTCGGTGGAGGAGG+TGG 0.332842 3_2:+48569276 Msa0408640:CDS
GGAGGTGGTGGTGGATTTGG+TGG 0.332982 3_2:+48569291 Msa0408640:CDS
AGTGGACTTGGAGGTGGTTT+CGG 0.334822 3_2:+48569264 Msa0408640:CDS
GGTGGAGGTGCAGGAGGAGG+TGG 0.338908 3_2:+48569153 Msa0408640:CDS
TTCTTTCATCGTCCAGGGTT+TGG 0.340184 3_2:+48569132 Msa0408640:CDS
GTTGGTGGAGGATCAGGGTT+TGG 0.340405 3_2:+48569324 Msa0408640:CDS
GGAGGTGCAGGAGGAGGTGG+TGG 0.346229 3_2:+48569156 Msa0408640:CDS
TTTGGAGGTGGTGGTGGTGG+TGG 0.348718 3_2:+48569414 Msa0408640:CDS
AAGCTTGGGGTCAGTGATAA+GGG 0.350544 3_2:+48569090 Msa0408640:CDS
GGTTTCGGTGGAGGAGGTGG+TGG 0.358811 3_2:+48569279 Msa0408640:CDS
TTTGGTGGAGGAGGTGGTGT+TGG 0.365009 3_2:+48569306 Msa0408640:CDS
GCTGGAGGTGGAGTTGGAGG+TGG 0.370741 3_2:+48569477 Msa0408640:CDS
GGTGGATTTGGTGGAGGAGG+TGG 0.371882 3_2:+48569300 Msa0408640:CDS
TTCGGTGGAGGAGGTGGTGG+TGG 0.373009 3_2:+48569282 Msa0408640:CDS
GGTGGTGGATTTGGTGGAGG+AGG 0.373297 3_2:+48569297 Msa0408640:CDS
TCAGGGTTTGGAGGAGGATC+AGG 0.377455 3_2:+48569336 Msa0408640:CDS
GGACTTGGTGGTGCTGGATC+CGG 0.380586 3_2:+48569435 Msa0408640:CDS
GCTGGTGCTGGTGGAGGAGC+AGG 0.381581 3_2:+48569240 Msa0408640:CDS
GGAGGGTTAGGTGGTGGCTC+TGG 0.381842 3_2:+48569204 Msa0408640:CDS
GGAGGAGGATTTGGAGGTGG+TGG 0.384560 3_2:+48569405 Msa0408640:CDS
GGGTTAGGTGGTGGCTCTGG+AGG 0.386993 3_2:+48569207 Msa0408640:CDS
CCATTGATGCAAGGAAGCTT+GGG 0.387613 3_2:+48569076 Msa0408640:CDS
CCAGGGTTTGGTGGAGGTGC+AGG 0.387674 3_2:+48569144 Msa0408640:CDS
GGTGCTGGAGGTGGAGTTGG+AGG 0.391024 3_2:+48569474 Msa0408640:CDS
GGAGGAGGTGGTGTTGGTGG+AGG 0.391526 3_2:+48569312 Msa0408640:CDS
GGTGGAGGAGGTGGTGTTGG+TGG 0.397604 3_2:+48569309 Msa0408640:CDS
TTAGGTGGTGGCTCTGGAGG+TGG 0.400925 3_2:+48569210 Msa0408640:CDS
TCTGGAGGTGGATTTGGTGC+TGG 0.402601 3_2:+48569222 Msa0408640:CDS
CTTGGAGGTGGTTTCGGTGG+AGG 0.402716 3_2:+48569270 Msa0408640:CDS
TTTGGTGGTGGTGCCGGTGC+TGG 0.403652 3_2:+48569360 Msa0408640:CDS
GGTGGTGCCGGTGCTGGTAG+TGG 0.409173 3_2:+48569366 Msa0408640:CDS
TTTGGTGCTGGTGCTGGTGG+AGG 0.410997 3_2:+48569234 Msa0408640:CDS
AAGAATTTCTTTCATCGTCC+AGG 0.412408 3_2:+48569126 Msa0408640:CDS
ACCATTGATGCAAGGAAGCT+TGG 0.416064 3_2:+48569075 Msa0408640:CDS
GGTGGTGGAGGAGGATTTGG+AGG 0.420178 3_2:+48569399 Msa0408640:CDS
GCCGGTGCTGGTAGTGGACT+CGG 0.423053 3_2:+48569372 Msa0408640:CDS
CCCAAGCTTCCTTGCATCAA+TGG 0.426215 3_2:-48569076 None:intergenic
GGTGGTGGTGGTGGACTTGG+TGG 0.426952 3_2:+48569423 Msa0408640:CDS
GGTGGTGGTGGATTTGGTGG+AGG 0.427290 3_2:+48569294 Msa0408640:CDS
AGTGGACTCGGAGGAGGTGG+TGG 0.427865 3_2:+48569384 Msa0408640:CDS
GAAGCTTGGGGTCAGTGATA+AGG 0.431414 3_2:+48569089 Msa0408640:CDS
GGAGGAGCAGGAAGTGGACT+TGG 0.432274 3_2:+48569252 Msa0408640:CDS
CTCGGAGGAGGTGGTGGAGG+AGG 0.434275 3_2:+48569390 Msa0408640:CDS
GGTAGTGGAGGAGGGTTAGG+TGG 0.441126 3_2:+48569195 Msa0408640:CDS
GGTGGAGGAGGATTTGGAGG+TGG 0.446757 3_2:+48569402 Msa0408640:CDS
GGATTTGGTGCTGGTGCTGG+TGG 0.449330 3_2:+48569231 Msa0408640:CDS
GTGGTGTTGGTGGAGGATCA+GGG 0.457376 3_2:+48569319 Msa0408640:CDS
CATCGTCCAGGGTTTGGTGG+AGG 0.457443 3_2:+48569138 Msa0408640:CDS
GTGGTGGTGGTAGTGGAGGA+GGG 0.462494 3_2:+48569187 Msa0408640:CDS
TCAGGATTTGGTGGTGGTGC+CGG 0.467046 3_2:+48569354 Msa0408640:CDS
GGTAGTGGACTCGGAGGAGG+TGG 0.470318 3_2:+48569381 Msa0408640:CDS
GCTGGTAGTGGACTCGGAGG+AGG 0.474269 3_2:+48569378 Msa0408640:CDS
GGAGGAGGATCAGGATTTGG+TGG 0.476127 3_2:+48569345 Msa0408640:CDS
GGACTCGGAGGAGGTGGTGG+AGG 0.478013 3_2:+48569387 Msa0408640:CDS
GGATTTGGTGGTGGTGCTGG+AGG 0.482448 3_2:+48569462 Msa0408640:CDS
GCTGGTGGAGGAGCAGGAAG+TGG 0.482508 3_2:+48569246 Msa0408640:CDS
GGAGGTGGTTTCGGTGGAGG+AGG 0.485681 3_2:+48569273 Msa0408640:CDS
GGGTTTGGTGGAGGTGCAGG+AGG 0.487071 3_2:+48569147 Msa0408640:CDS
AGTGGAGGAGGGTTAGGTGG+TGG 0.487670 3_2:+48569198 Msa0408640:CDS
CTTGGTGGTGCTGGATCCGG+TGG 0.500399 3_2:+48569438 Msa0408640:CDS
TTTCATCGTCCAGGGTTTGG+TGG 0.501728 3_2:+48569135 Msa0408640:CDS
GGAGGATCAGGGTTTGGAGG+AGG 0.502992 3_2:+48569330 Msa0408640:CDS
GGTGGTGCTGGATCCGGTGG+AGG 0.512746 3_2:+48569441 Msa0408640:CDS
GGAGGATCAGGATTTGGTGG+TGG 0.517169 3_2:+48569348 Msa0408640:CDS
GCAGGAAGTGGACTTGGAGG+TGG 0.519131 3_2:+48569258 Msa0408640:CDS
GGACTTGGAGGTGGTTTCGG+TGG 0.526282 3_2:+48569267 Msa0408640:CDS
GGAGCAGGAAGTGGACTTGG+AGG 0.531460 3_2:+48569255 Msa0408640:CDS
GGATCCGGTGGAGGATTTGG+TGG 0.532142 3_2:+48569450 Msa0408640:CDS
GGTGGAGGATCAGGGTTTGG+AGG 0.532597 3_2:+48569327 Msa0408640:CDS
CCTGCACCTCCACCAAACCC+TGG 0.534557 3_2:-48569144 None:intergenic
AGAATTTCTTTCATCGTCCA+GGG 0.548088 3_2:+48569127 Msa0408640:CDS
TCCGGTGGAGGATTTGGTGG+TGG 0.554482 3_2:+48569453 Msa0408640:CDS
TCCGAGTCCACTACCAGCAC+CGG 0.589365 3_2:-48569373 None:intergenic
ACCACCACCAAATCCTCCAC+CGG 0.600758 3_2:-48569454 None:intergenic
TTTGTAGCACCATTGATGCA+AGG 0.612885 3_2:+48569067 Msa0408640:CDS
AGCTTGGGGTCAGTGATAAG+GGG 0.624169 3_2:+48569091 Msa0408640:CDS
CATTGATGCAAGGAAGCTTG+GGG 0.666605 3_2:+48569077 Msa0408640:CDS
GGTGCTGGTAGTGGACTCGG+AGG 0.700096 3_2:+48569375 Msa0408640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AAGAATTTCTTTCATCGTCC+AGG + chr3_2:48569126-48569145 Msa0408640:CDS 35.0%
AGAATTTCTTTCATCGTCCA+GGG + chr3_2:48569127-48569146 Msa0408640:CDS 35.0%
!!! GTTCTGCTTTTTGTGCTTCT+TGG + chr3_2:48569036-48569055 Msa0408640:CDS 40.0%
TTTGTAGCACCATTGATGCA+AGG + chr3_2:48569067-48569086 Msa0408640:CDS 40.0%
ACCATTGATGCAAGGAAGCT+TGG + chr3_2:48569075-48569094 Msa0408640:CDS 45.0%
CCATTGATGCAAGGAAGCTT+GGG + chr3_2:48569076-48569095 Msa0408640:CDS 45.0%
CATTGATGCAAGGAAGCTTG+GGG + chr3_2:48569077-48569096 Msa0408640:CDS 45.0%
AAGCTTGGGGTCAGTGATAA+GGG + chr3_2:48569090-48569109 Msa0408640:CDS 45.0%
TTCTTTCATCGTCCAGGGTT+TGG + chr3_2:48569132-48569151 Msa0408640:CDS 45.0%
TTTGGAGGAGGATCAGGATT+TGG + chr3_2:48569342-48569361 Msa0408640:CDS 45.0%
CCCAAGCTTCCTTGCATCAA+TGG - chr3_2:48569079-48569098 None:intergenic 50.0%
GAAGCTTGGGGTCAGTGATA+AGG + chr3_2:48569089-48569108 Msa0408640:CDS 50.0%
AGCTTGGGGTCAGTGATAAG+GGG + chr3_2:48569091-48569110 Msa0408640:CDS 50.0%
TTTCATCGTCCAGGGTTTGG+TGG + chr3_2:48569135-48569154 Msa0408640:CDS 50.0%
! AGTGGACTTGGAGGTGGTTT+CGG + chr3_2:48569264-48569283 Msa0408640:CDS 50.0%
!! TTTGGTGGTGGTGGTGGTAG+TGG + chr3_2:48569180-48569199 Msa0408640:CDS 55.0%
!! TCTGGAGGTGGATTTGGTGC+TGG + chr3_2:48569222-48569241 Msa0408640:CDS 55.0%
TTTGGTGGAGGAGGTGGTGT+TGG + chr3_2:48569306-48569325 Msa0408640:CDS 55.0%
!! GTGGTGTTGGTGGAGGATCA+GGG + chr3_2:48569319-48569338 Msa0408640:CDS 55.0%
! GTTGGTGGAGGATCAGGGTT+TGG + chr3_2:48569324-48569343 Msa0408640:CDS 55.0%
TCAGGGTTTGGAGGAGGATC+AGG + chr3_2:48569336-48569355 Msa0408640:CDS 55.0%
GGAGGAGGATCAGGATTTGG+TGG + chr3_2:48569345-48569364 Msa0408640:CDS 55.0%
!! GGAGGATCAGGATTTGGTGG+TGG + chr3_2:48569348-48569367 Msa0408640:CDS 55.0%
!! TCAGGATTTGGTGGTGGTGC+CGG + chr3_2:48569354-48569373 Msa0408640:CDS 55.0%
ACCACCACCAAATCCTCCAC+CGG - chr3_2:48569457-48569476 None:intergenic 55.0%
!! CATCGTCCAGGGTTTGGTGG+AGG + chr3_2:48569138-48569157 Msa0408640:CDS 60.0%
! TTTGGTGGAGGTGCAGGAGG+AGG + chr3_2:48569150-48569169 Msa0408640:CDS 60.0%
!! GCAGGAGGAGGTGGTGGTTT+TGG + chr3_2:48569162-48569181 Msa0408640:CDS 60.0%
!!! GGAGGAGGTGGTGGTTTTGG+TGG + chr3_2:48569165-48569184 Msa0408640:CDS 60.0%
!!! GGAGGTGGTGGTTTTGGTGG+TGG + chr3_2:48569168-48569187 Msa0408640:CDS 60.0%
!!! GGTGGTGGTTTTGGTGGTGG+TGG + chr3_2:48569171-48569190 Msa0408640:CDS 60.0%
!!! GGTGGTTTTGGTGGTGGTGG+TGG + chr3_2:48569174-48569193 Msa0408640:CDS 60.0%
!! GTGGTGGTGGTAGTGGAGGA+GGG + chr3_2:48569187-48569206 Msa0408640:CDS 60.0%
!! GGTGGTAGTGGAGGAGGGTT+AGG + chr3_2:48569192-48569211 Msa0408640:CDS 60.0%
!! GGTAGTGGAGGAGGGTTAGG+TGG + chr3_2:48569195-48569214 Msa0408640:CDS 60.0%
AGTGGAGGAGGGTTAGGTGG+TGG + chr3_2:48569198-48569217 Msa0408640:CDS 60.0%
!! TTAGGTGGTGGCTCTGGAGG+TGG + chr3_2:48569210-48569229 Msa0408640:CDS 60.0%
!! GGTGGCTCTGGAGGTGGATT+TGG + chr3_2:48569216-48569235 Msa0408640:CDS 60.0%
!! GGTGGATTTGGTGCTGGTGC+TGG + chr3_2:48569228-48569247 Msa0408640:CDS 60.0%
!! GGATTTGGTGCTGGTGCTGG+TGG + chr3_2:48569231-48569250 Msa0408640:CDS 60.0%
!! TTTGGTGCTGGTGCTGGTGG+AGG + chr3_2:48569234-48569253 Msa0408640:CDS 60.0%
! GGAGGAGCAGGAAGTGGACT+TGG + chr3_2:48569252-48569271 Msa0408640:CDS 60.0%
! GGAGCAGGAAGTGGACTTGG+AGG + chr3_2:48569255-48569274 Msa0408640:CDS 60.0%
! GCAGGAAGTGGACTTGGAGG+TGG + chr3_2:48569258-48569277 Msa0408640:CDS 60.0%
GGACTTGGAGGTGGTTTCGG+TGG + chr3_2:48569267-48569286 Msa0408640:CDS 60.0%
CTTGGAGGTGGTTTCGGTGG+AGG + chr3_2:48569270-48569289 Msa0408640:CDS 60.0%
!! GGAGGAGGTGGTGGTGGATT+TGG + chr3_2:48569288-48569307 Msa0408640:CDS 60.0%
!! GGAGGTGGTGGTGGATTTGG+TGG + chr3_2:48569291-48569310 Msa0408640:CDS 60.0%
!! GGTGGTGGTGGATTTGGTGG+AGG + chr3_2:48569294-48569313 Msa0408640:CDS 60.0%
!! GGTGGTGGATTTGGTGGAGG+AGG + chr3_2:48569297-48569316 Msa0408640:CDS 60.0%
!! GGTGGATTTGGTGGAGGAGG+TGG + chr3_2:48569300-48569319 Msa0408640:CDS 60.0%
!! GGTGGTGTTGGTGGAGGATC+AGG + chr3_2:48569318-48569337 Msa0408640:CDS 60.0%
GGTGGAGGATCAGGGTTTGG+AGG + chr3_2:48569327-48569346 Msa0408640:CDS 60.0%
GGAGGATCAGGGTTTGGAGG+AGG + chr3_2:48569330-48569349 Msa0408640:CDS 60.0%
TCCGAGTCCACTACCAGCAC+CGG - chr3_2:48569376-48569395 None:intergenic 60.0%
!! GGAGGTGGTGGAGGAGGATT+TGG + chr3_2:48569396-48569415 Msa0408640:CDS 60.0%
!! GGTGGTGGAGGAGGATTTGG+AGG + chr3_2:48569399-48569418 Msa0408640:CDS 60.0%
GGTGGAGGAGGATTTGGAGG+TGG + chr3_2:48569402-48569421 Msa0408640:CDS 60.0%
GGAGGAGGATTTGGAGGTGG+TGG + chr3_2:48569405-48569424 Msa0408640:CDS 60.0%
! GGAGGATTTGGAGGTGGTGG+TGG + chr3_2:48569408-48569427 Msa0408640:CDS 60.0%
!! GGATTTGGAGGTGGTGGTGG+TGG + chr3_2:48569411-48569430 Msa0408640:CDS 60.0%
!! TTTGGAGGTGGTGGTGGTGG+TGG + chr3_2:48569414-48569433 Msa0408640:CDS 60.0%
!! GGACTTGGTGGTGCTGGATC+CGG + chr3_2:48569435-48569454 Msa0408640:CDS 60.0%
GCTGGATCCGGTGGAGGATT+TGG + chr3_2:48569447-48569466 Msa0408640:CDS 60.0%
GGATCCGGTGGAGGATTTGG+TGG + chr3_2:48569450-48569469 Msa0408640:CDS 60.0%
!! TCCGGTGGAGGATTTGGTGG+TGG + chr3_2:48569453-48569472 Msa0408640:CDS 60.0%
!! GGAGGATTTGGTGGTGGTGC+TGG + chr3_2:48569459-48569478 Msa0408640:CDS 60.0%
!! GGATTTGGTGGTGGTGCTGG+AGG + chr3_2:48569462-48569481 Msa0408640:CDS 60.0%
!! TTTGGTGGTGGTGCTGGAGG+TGG + chr3_2:48569465-48569484 Msa0408640:CDS 60.0%
CCTGCACCTCCACCAAACCC+TGG - chr3_2:48569147-48569166 None:intergenic 65.0%
!! CCAGGGTTTGGTGGAGGTGC+AGG + chr3_2:48569144-48569163 Msa0408640:CDS 65.0%
!! GGGTTTGGTGGAGGTGCAGG+AGG + chr3_2:48569147-48569166 Msa0408640:CDS 65.0%
!! GGTGGTGGTGGTGGTAGTGG+AGG + chr3_2:48569183-48569202 Msa0408640:CDS 65.0%
!! GGTGGTGGTGGTAGTGGAGG+AGG + chr3_2:48569186-48569205 Msa0408640:CDS 65.0%
! GGAGGGTTAGGTGGTGGCTC+TGG + chr3_2:48569204-48569223 Msa0408640:CDS 65.0%
!! GGGTTAGGTGGTGGCTCTGG+AGG + chr3_2:48569207-48569226 Msa0408640:CDS 65.0%
GCTGGTGGAGGAGCAGGAAG+TGG + chr3_2:48569246-48569265 Msa0408640:CDS 65.0%
GGAGGTGGTTTCGGTGGAGG+AGG + chr3_2:48569273-48569292 Msa0408640:CDS 65.0%
GGTGGTTTCGGTGGAGGAGG+TGG + chr3_2:48569276-48569295 Msa0408640:CDS 65.0%
GGTTTCGGTGGAGGAGGTGG+TGG + chr3_2:48569279-48569298 Msa0408640:CDS 65.0%
! TTCGGTGGAGGAGGTGGTGG+TGG + chr3_2:48569282-48569301 Msa0408640:CDS 65.0%
! GGTGGAGGAGGTGGTGTTGG+TGG + chr3_2:48569309-48569328 Msa0408640:CDS 65.0%
!! GGAGGAGGTGGTGTTGGTGG+AGG + chr3_2:48569312-48569331 Msa0408640:CDS 65.0%
!! TTTGGTGGTGGTGCCGGTGC+TGG + chr3_2:48569360-48569379 Msa0408640:CDS 65.0%
!! GCCGGTGCTGGTAGTGGACT+CGG + chr3_2:48569372-48569391 Msa0408640:CDS 65.0%
!! GGTGCTGGTAGTGGACTCGG+AGG + chr3_2:48569375-48569394 Msa0408640:CDS 65.0%
!! GCTGGTAGTGGACTCGGAGG+AGG + chr3_2:48569378-48569397 Msa0408640:CDS 65.0%
!! GGTAGTGGACTCGGAGGAGG+TGG + chr3_2:48569381-48569400 Msa0408640:CDS 65.0%
! AGTGGACTCGGAGGAGGTGG+TGG + chr3_2:48569384-48569403 Msa0408640:CDS 65.0%
!! GGTGGTGGTGGTGGTGGACT+TGG + chr3_2:48569420-48569439 Msa0408640:CDS 65.0%
!! GGTGGTGGTGGTGGACTTGG+TGG + chr3_2:48569423-48569442 Msa0408640:CDS 65.0%
!! GGTGGTGGACTTGGTGGTGC+TGG + chr3_2:48569429-48569448 Msa0408640:CDS 65.0%
!! CTTGGTGGTGCTGGATCCGG+TGG + chr3_2:48569438-48569457 Msa0408640:CDS 65.0%
! GGTGGTGCTGGAGGTGGAGT+TGG + chr3_2:48569471-48569490 Msa0408640:CDS 65.0%
! GGTGCTGGAGGTGGAGTTGG+AGG + chr3_2:48569474-48569493 Msa0408640:CDS 65.0%
GCTGGAGGTGGAGTTGGAGG+TGG + chr3_2:48569477-48569496 Msa0408640:CDS 65.0%
! GGTGGAGGTGCAGGAGGAGG+TGG + chr3_2:48569153-48569172 Msa0408640:CDS 70.0%
! GGAGGTGCAGGAGGAGGTGG+TGG + chr3_2:48569156-48569175 Msa0408640:CDS 70.0%
!! GCTGGTGCTGGTGGAGGAGC+AGG + chr3_2:48569240-48569259 Msa0408640:CDS 70.0%
!! GGTGGTGCCGGTGCTGGTAG+TGG + chr3_2:48569366-48569385 Msa0408640:CDS 70.0%
! GGACTCGGAGGAGGTGGTGG+AGG + chr3_2:48569387-48569406 Msa0408640:CDS 70.0%
!! CTCGGAGGAGGTGGTGGAGG+AGG + chr3_2:48569390-48569409 Msa0408640:CDS 70.0%
! GGTGGTGCTGGATCCGGTGG+AGG + chr3_2:48569441-48569460 Msa0408640:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 48569018 48569509 48569018 ID=Msa0408640;Name=Msa0408640
chr3_2 mRNA 48569018 48569509 48569018 ID=Msa0408640-mRNA-1;Parent=Msa0408640;Name=Msa0408640-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|163
chr3_2 exon 48569018 48569509 48569018 ID=Msa0408640-mRNA-1:exon:9429;Parent=Msa0408640-mRNA-1
chr3_2 CDS 48569018 48569509 48569018 ID=Msa0408640-mRNA-1:cds;Parent=Msa0408640-mRNA-1
Gene Sequence

>Msa0408640

ATGGCTTCAAGTTCAAGTGTTCTGCTTTTTGTGCTTCTTGGTGCTCTTGTTTGTAGCACCATTGATGCAAGGAAGCTTGGGGTCAGTGATAAGGGGTTAAGAGATGAGAAGAATTTCTTTCATCGTCCAGGGTTTGGTGGAGGTGCAGGAGGAGGTGGTGGTTTTGGTGGTGGTGGTGGTAGTGGAGGAGGGTTAGGTGGTGGCTCTGGAGGTGGATTTGGTGCTGGTGCTGGTGGAGGAGCAGGAAGTGGACTTGGAGGTGGTTTCGGTGGAGGAGGTGGTGGTGGATTTGGTGGAGGAGGTGGTGTTGGTGGAGGATCAGGGTTTGGAGGAGGATCAGGATTTGGTGGTGGTGCCGGTGCTGGTAGTGGACTCGGAGGAGGTGGTGGAGGAGGATTTGGAGGTGGTGGTGGTGGTGGACTTGGTGGTGCTGGATCCGGTGGAGGATTTGGTGGTGGTGCTGGAGGTGGAGTTGGAGGTGGATTTCCATGA

Protein sequence

>Msa0408640

MASSSSVLLFVLLGALVCSTIDARKLGVSDKGLRDEKNFFHRPGFGGGAGGGGGFGGGGGSGGGLGGGSGGGFGAGAGGGAGSGLGGGFGGGGGGGFGGGGGVGGGSGFGGGSGFGGGAGAGSGLGGGGGGGFGGGGGGGLGGAGSGGGFGGGAGGGVGGGFP*