Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526750 | XP_003591003.1 | 95.737 | 563 | 16 | 6 | 1 | 561 | 1 | 557 | 0.0 | 1094 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526750 | sp|Q8H181|GTL2_ARATH | 40.917 | 589 | 239 | 19 | 1 | 511 | 1 | 558 | 6.42e-102 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526750 | G7I6V9 | 95.737 | 563 | 16 | 6 | 1 | 561 | 1 | 557 | 0.0 | 1094 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0526750 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0134130 | Msa0526750 | 0.814801 | 1.280187e-51 | -8.615850e-47 |
| Msa0151370 | Msa0526750 | 0.803400 | 3.550598e-49 | -8.615850e-47 |
| Msa0172330 | Msa0526750 | 0.952691 | 1.402328e-110 | -8.615850e-47 |
| Msa0203160 | Msa0526750 | 0.836416 | 9.478819e-57 | -8.615850e-47 |
| Msa0526660 | Msa0526750 | 0.969492 | 3.346969e-130 | -8.615850e-47 |
| Msa0526750 | Msa0647800 | 0.801476 | 8.843821e-49 | -8.615850e-47 |
| Msa0526750 | Msa0810020 | 0.800860 | 1.182147e-48 | -8.615850e-47 |
| Msa0526750 | Msa0850500 | 0.809204 | 2.124251e-50 | -8.615850e-47 |
| Msa0526750 | Msa0854830 | 0.802546 | 5.329237e-49 | -8.615850e-47 |
| Msa0526750 | Msa0905550 | 0.829293 | 5.583239e-55 | -8.615850e-47 |
| Msa0526750 | Msa0937550 | 0.835475 | 1.641845e-56 | -8.615850e-47 |
| Msa0526750 | Msa0974750 | 0.814182 | 1.755351e-51 | -8.615850e-47 |
| Msa0526750 | Msa1018790 | 0.812780 | 3.569584e-51 | -8.615850e-47 |
| Msa0526750 | Msa1041530 | 0.815532 | 8.811289e-52 | -8.615850e-47 |
| Msa0526750 | Msa1061500 | 0.815510 | 8.910111e-52 | -8.615850e-47 |
| Msa0526750 | Msa1081570 | 0.806659 | 7.387390e-50 | -8.615850e-47 |
| Msa0526750 | Msa1107440 | 0.807019 | 6.202070e-50 | -8.615850e-47 |
| Msa0526750 | Msa1127140 | 0.801492 | 8.777252e-49 | -8.615850e-47 |
| Msa0526750 | Msa1150970 | 0.832497 | 9.141046e-56 | -8.615850e-47 |
| Msa0526750 | Msa1210810 | 0.813015 | 3.169424e-51 | -8.615850e-47 |
| Msa0526750 | Msa1249870 | 0.815810 | 7.640491e-52 | -8.615850e-47 |
| Msa0526750 | Msa1390270 | 0.951776 | 9.989619e-110 | -8.615850e-47 |
| Msa0526750 | Msa1420060 | 0.822807 | 1.944037e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526750 | MtrunA17_Chr1g0190851 | 95.737 | 563 | 16 | 6 | 1 | 561 | 1 | 557 | 0.0 | 1094 |
| Msa0526750 | MtrunA17_Chr7g0273941 | 45.070 | 497 | 187 | 18 | 33 | 511 | 51 | 479 | 1.65e-110 | 338 |
| Msa0526750 | MtrunA17_Chr1g0201941 | 35.135 | 296 | 161 | 7 | 229 | 511 | 266 | 543 | 9.10e-48 | 176 |
| Msa0526750 | MtrunA17_Chr1g0201941 | 40.000 | 100 | 57 | 2 | 409 | 508 | 46 | 142 | 2.54e-16 | 82.4 |
| Msa0526750 | MtrunA17_Chr1g0201941 | 43.529 | 85 | 43 | 1 | 104 | 183 | 58 | 142 | 2.30e-14 | 76.3 |
| Msa0526750 | MtrunA17_Chr2g0290511 | 34.043 | 282 | 154 | 6 | 257 | 532 | 117 | 372 | 2.63e-37 | 142 |
| Msa0526750 | MtrunA17_Chr1g0201911 | 34.363 | 259 | 136 | 5 | 254 | 511 | 236 | 461 | 1.49e-34 | 137 |
| Msa0526750 | MtrunA17_Chr1g0201911 | 45.882 | 85 | 41 | 1 | 104 | 183 | 56 | 140 | 8.43e-15 | 77.4 |
| Msa0526750 | MtrunA17_Chr1g0201911 | 40.217 | 92 | 52 | 2 | 420 | 511 | 55 | 143 | 3.55e-14 | 75.5 |
| Msa0526750 | MtrunA17_Chr6g0463941 | 59.783 | 92 | 35 | 1 | 420 | 511 | 464 | 553 | 2.63e-27 | 116 |
| Msa0526750 | MtrunA17_Chr6g0463941 | 40.860 | 93 | 52 | 2 | 418 | 510 | 53 | 142 | 1.16e-15 | 80.1 |
| Msa0526750 | MtrunA17_Chr6g0463941 | 42.353 | 85 | 44 | 1 | 104 | 183 | 56 | 140 | 2.92e-14 | 75.9 |
| Msa0526750 | MtrunA17_Chr7g0265831 | 27.612 | 268 | 163 | 7 | 104 | 345 | 116 | 378 | 5.12e-19 | 90.1 |
| Msa0526750 | MtrunA17_Chr7g0265831 | 39.785 | 93 | 52 | 3 | 420 | 511 | 115 | 204 | 1.55e-12 | 70.1 |
| Msa0526750 | MtrunA17_Chr1g0179191 | 29.536 | 237 | 152 | 6 | 104 | 327 | 132 | 366 | 1.49e-17 | 85.9 |
| Msa0526750 | MtrunA17_Chr1g0179191 | 39.785 | 93 | 52 | 3 | 420 | 511 | 131 | 220 | 1.63e-12 | 70.1 |
| Msa0526750 | MtrunA17_Chr1g0198171 | 35.294 | 136 | 75 | 4 | 383 | 508 | 68 | 200 | 1.91e-15 | 79.3 |
| Msa0526750 | MtrunA17_Chr1g0198171 | 24.165 | 389 | 217 | 15 | 4 | 329 | 6 | 379 | 9.39e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526750 | AT5G28300.1 | 40.917 | 589 | 239 | 19 | 1 | 511 | 1 | 558 | 6.53e-103 | 323 |
| Msa0526750 | AT1G76890.2 | 38.806 | 268 | 130 | 4 | 245 | 511 | 252 | 486 | 4.95e-47 | 173 |
| Msa0526750 | AT1G76890.2 | 46.591 | 88 | 44 | 2 | 418 | 505 | 39 | 123 | 1.96e-16 | 82.8 |
| Msa0526750 | AT1G76890.2 | 45.783 | 83 | 40 | 1 | 104 | 181 | 42 | 124 | 3.91e-14 | 75.9 |
| Msa0526750 | AT1G76880.1 | 34.082 | 267 | 138 | 4 | 257 | 511 | 257 | 497 | 2.81e-37 | 146 |
| Msa0526750 | AT1G76880.1 | 39.048 | 105 | 61 | 2 | 418 | 522 | 59 | 160 | 3.89e-15 | 79.0 |
| Msa0526750 | AT1G76880.1 | 44.706 | 85 | 42 | 1 | 104 | 183 | 62 | 146 | 8.26e-13 | 71.6 |
| Msa0526750 | AT1G33240.3 | 57.778 | 90 | 36 | 1 | 420 | 509 | 435 | 522 | 3.48e-26 | 113 |
| Msa0526750 | AT1G33240.3 | 43.820 | 89 | 47 | 2 | 420 | 508 | 62 | 147 | 4.95e-17 | 84.7 |
| Msa0526750 | AT1G33240.3 | 45.882 | 85 | 41 | 1 | 104 | 183 | 63 | 147 | 2.02e-16 | 82.8 |
| Msa0526750 | AT1G33240.2 | 57.778 | 90 | 36 | 1 | 420 | 509 | 396 | 483 | 3.88e-26 | 113 |
| Msa0526750 | AT1G33240.1 | 57.778 | 90 | 36 | 1 | 420 | 509 | 435 | 522 | 4.08e-26 | 113 |
| Msa0526750 | AT1G33240.1 | 43.820 | 89 | 47 | 2 | 420 | 508 | 62 | 147 | 4.73e-17 | 85.1 |
| Msa0526750 | AT1G33240.1 | 45.882 | 85 | 41 | 1 | 104 | 183 | 63 | 147 | 2.57e-16 | 82.8 |
| Msa0526750 | AT5G47660.1 | 33.209 | 268 | 131 | 12 | 242 | 509 | 169 | 388 | 2.42e-19 | 90.9 |
| Msa0526750 | AT3G10000.1 | 27.841 | 176 | 113 | 5 | 340 | 513 | 17 | 180 | 1.47e-14 | 76.6 |
| Msa0526750 | AT5G03680.1 | 42.857 | 91 | 48 | 3 | 420 | 509 | 119 | 206 | 1.47e-13 | 73.9 |
| Msa0526750 | AT3G10000.2 | 25.714 | 175 | 108 | 5 | 340 | 513 | 17 | 170 | 8.91e-12 | 67.8 |
Find 127 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATAGATTTGAAGTGTTTA+AGG | 0.195477 | 3_4:-80812544 | Msa0526750:CDS |
| GTCTTTGATCTCTTTCAATT+TGG | 0.216907 | 3_4:+80813447 | None:intergenic |
| ATAAGGCTATATGAAGAAAT+AGG | 0.236435 | 3_4:+80812084 | None:intergenic |
| CTCTCTCGCTGCTCGATATA+AGG | 0.299308 | 3_4:+80812067 | None:intergenic |
| GTTGAACTTGGAGAGGTAAT+TGG | 0.302988 | 3_4:+80813552 | None:intergenic |
| TCCTTCTTCTTCTACTACTT+TGG | 0.306363 | 3_4:-80812130 | Msa0526750:CDS |
| CCTTATCTTCATCATCTTTG+TGG | 0.317408 | 3_4:+80813504 | None:intergenic |
| AATGCCAACACTTCATCTTT+TGG | 0.317647 | 3_4:+80812024 | None:intergenic |
| AATCATAATCAAAATAGTTT+TGG | 0.326250 | 3_4:-80812798 | Msa0526750:CDS |
| CTTATCTTCATCATCTTTGT+GGG | 0.336037 | 3_4:+80813505 | None:intergenic |
| AGGGTTGAGCTAGGGTTTAC+AGG | 0.337022 | 3_4:+80812153 | None:intergenic |
| TTTCAAGAGTTTCCGGATTA+GGG | 0.337138 | 3_4:+80812193 | None:intergenic |
| TCACAAGGAATGTTGGAGTT+AGG | 0.345818 | 3_4:-80811922 | Msa0526750:CDS |
| ACATGTTCCCAAGTGAAATC+TGG | 0.352061 | 3_4:+80813338 | None:intergenic |
| GAACGAGGTGCAAGACAAAA+TGG | 0.355649 | 3_4:-80812685 | Msa0526750:CDS |
| TATATGCAGCAGGTTCATTA+TGG | 0.361159 | 3_4:-80811595 | Msa0526750:three_prime_UTR |
| GAACAAAGAGCTTGAGTTGA+TGG | 0.361917 | 3_4:-80812382 | Msa0526750:CDS |
| GGAAGTGATGATGAAGTTCT+TGG | 0.366533 | 3_4:+80813665 | None:intergenic |
| GAGCTAGGGTTTACAGGTAT+TGG | 0.369227 | 3_4:+80812159 | None:intergenic |
| GATAGATTTGAAGTGTTTAA+GGG | 0.370463 | 3_4:-80812543 | Msa0526750:CDS |
| AGCAGCGAGAGAGACGATAT+TGG | 0.377007 | 3_4:-80812057 | Msa0526750:CDS |
| GAAGAAGGAAGGGTTGAGCT+AGG | 0.386310 | 3_4:+80812144 | None:intergenic |
| CAACAACAAGGCACCACTTT+GGG | 0.393210 | 3_4:-80811953 | Msa0526750:CDS |
| ATGAATTGGTGGAATTGGTC+AGG | 0.408406 | 3_4:+80813692 | None:intergenic |
| TTCTTCTTCTACTACTTTGG+TGG | 0.410965 | 3_4:-80812127 | Msa0526750:CDS |
| AGTTTAGTAGAGAAGAAGCT+TGG | 0.425700 | 3_4:-80812428 | Msa0526750:CDS |
| TTGAGCAATCTTTATAATCA+AGG | 0.426028 | 3_4:-80811775 | Msa0526750:CDS |
| GAGTTATGAATTGGTGGAAT+TGG | 0.428139 | 3_4:+80813687 | None:intergenic |
| GAGAAGAAGAGGAAAAGATC+AGG | 0.430204 | 3_4:-80812570 | Msa0526750:CDS |
| ATAGATAGAGAGAAGGGTAG+AGG | 0.436646 | 3_4:-80813867 | Msa0526750:five_prime_UTR |
| TAAGGCTATATGAAGAAATA+GGG | 0.437015 | 3_4:+80812085 | None:intergenic |
| GAGAATTTCACAAGGAATGT+TGG | 0.441400 | 3_4:-80811929 | Msa0526750:CDS |
| ATTTGGAAGTTGTTCATTGA+AGG | 0.451783 | 3_4:+80813464 | None:intergenic |
| TTCCTCAACTCATTGATCCT+TGG | 0.453786 | 3_4:-80813418 | Msa0526750:CDS |
| CAACAACAACAATGAAGAAA+AGG | 0.456418 | 3_4:-80811986 | Msa0526750:CDS |
| TGTTGATTATAAGGATCAAA+AGG | 0.457871 | 3_4:+80813596 | None:intergenic |
| CACCTGCACCAGCACCATCT+TGG | 0.460031 | 3_4:+80811656 | None:intergenic |
| AAATCTAGTTGAGGCTGAAA+AGG | 0.460400 | 3_4:-80812709 | Msa0526750:CDS |
| AAGAAGGAAGGGTTGAGCTA+GGG | 0.460441 | 3_4:+80812145 | None:intergenic |
| AAAGGAGGGAAAGTATTGTT+TGG | 0.461893 | 3_4:+80813614 | None:intergenic |
| TTGCTCAATAGATGAAAGTA+AGG | 0.463276 | 3_4:+80811790 | None:intergenic |
| GCAAGAGATTAGGTTGAACT+TGG | 0.468930 | 3_4:+80813540 | None:intergenic |
| CAGAGAAATAGATAGAGAGA+AGG | 0.470696 | 3_4:-80813874 | Msa0526750:five_prime_UTR |
| TAGATAGAGAGAAGGGTAGA+GGG | 0.472756 | 3_4:-80813866 | Msa0526750:five_prime_UTR |
| TGTAAAGGGTGCAAGAGATT+AGG | 0.478381 | 3_4:+80813530 | None:intergenic |
| TTCTTGGAGTTATGAATTGG+TGG | 0.479434 | 3_4:+80813681 | None:intergenic |
| GAGGTTTATCAAGGTGGTGG+GGG | 0.479843 | 3_4:-80812744 | Msa0526750:CDS |
| AGAGAAATAGATAGAGAGAA+GGG | 0.480380 | 3_4:-80813873 | Msa0526750:five_prime_UTR |
| CCACAAAGATGATGAAGATA+AGG | 0.480738 | 3_4:-80813504 | Msa0526750:CDS |
| CTCAAGTGGGGCCTCCAAGC+TGG | 0.484767 | 3_4:-80811627 | Msa0526750:CDS |
| CAAAGGAATTGAATAGAAGA+AGG | 0.485738 | 3_4:-80813789 | Msa0526750:five_prime_UTR |
| TTCAAGAATGGATGATGTAT+TGG | 0.485834 | 3_4:-80812643 | Msa0526750:CDS |
| CAAAGGATGCTAATAGGAAA+AGG | 0.488346 | 3_4:-80811834 | Msa0526750:CDS |
| GCAACAACAAGGCACCACTT+TGG | 0.490808 | 3_4:-80811954 | Msa0526750:CDS |
| GTCAAAGAAAAGTGAAGAAG+AGG | 0.493141 | 3_4:-80812619 | Msa0526750:CDS |
| TATTGTTTGGTGTTGAAAGA+GGG | 0.496288 | 3_4:+80813627 | None:intergenic |
| TGAAGATGACATTGAAGCTA+AGG | 0.499602 | 3_4:+80812275 | None:intergenic |
| GAAGAAGAGGTAGTTGAGAA+AGG | 0.502624 | 3_4:-80812606 | Msa0526750:CDS |
| GTAATTTCACTATATGCAGC+AGG | 0.504977 | 3_4:-80811605 | Msa0526750:exon |
| GCACATGAACAAGCTATTGC+TGG | 0.507249 | 3_4:-80812360 | Msa0526750:CDS |
| AAGTTCTTGGAGTTATGAAT+TGG | 0.511976 | 3_4:+80813678 | None:intergenic |
| CATGTTCCCAAGTGAAATCT+GGG | 0.514235 | 3_4:+80813339 | None:intergenic |
| GCAGGTGAGTCTTCTCAAGT+GGG | 0.514949 | 3_4:-80811640 | Msa0526750:CDS |
| CACAACACAAACATGTATGA+TGG | 0.515310 | 3_4:-80813719 | Msa0526750:exon |
| GTTGGTTCCCAGATTTCACT+TGG | 0.516402 | 3_4:-80813346 | Msa0526750:CDS |
| GCACTCACAAAACCCTAATC+CGG | 0.519084 | 3_4:-80812205 | Msa0526750:CDS |
| GAAGAGGTTTATCAAGGTGG+TGG | 0.520513 | 3_4:-80812747 | Msa0526750:CDS |
| TTATCTTCATCATCTTTGTG+GGG | 0.521990 | 3_4:+80813506 | None:intergenic |
| AGAGGGAAAGGTAAGTGAAG+AGG | 0.522502 | 3_4:+80813644 | None:intergenic |
| AACCAAGATGGTGCTGGTGC+AGG | 0.525566 | 3_4:-80811658 | Msa0526750:CDS |
| GTTTGTTACTGAGCTGGAAG+AGG | 0.529219 | 3_4:-80812763 | Msa0526750:CDS |
| TGCAGGTGAGTCTTCTCAAG+TGG | 0.532154 | 3_4:-80811641 | Msa0526750:CDS |
| AAGTAGTAGAAGAAGAAGGA+AGG | 0.534716 | 3_4:+80812133 | None:intergenic |
| TTTGGTGTTGAAAGAGGGAA+AGG | 0.535775 | 3_4:+80813632 | None:intergenic |
| GAGACGATATTGGTAGAAGA+TGG | 0.544390 | 3_4:-80812047 | Msa0526750:CDS |
| TGGGAACCAACTCTCCATGC+TGG | 0.546340 | 3_4:+80813358 | None:intergenic |
| GTATTGTTTGGTGTTGAAAG+AGG | 0.549012 | 3_4:+80813626 | None:intergenic |
| CAAAGAGGTGCAAAGAGAAG+TGG | 0.549838 | 3_4:-80811885 | Msa0526750:CDS |
| TATCTTCATCATCTTTGTGG+GGG | 0.551544 | 3_4:+80813507 | None:intergenic |
| ATTGGTGATGTTGAGAAGGG+TGG | 0.552861 | 3_4:+80813570 | None:intergenic |
| TGTAGAGGAGGATTCAAGAA+TGG | 0.554166 | 3_4:-80812655 | Msa0526750:CDS |
| AGAGGTTTATCAAGGTGGTG+GGG | 0.556530 | 3_4:-80812745 | Msa0526750:CDS |
| TAGTGAAATTACCAGCTTGG+AGG | 0.560803 | 3_4:+80811616 | None:intergenic |
| TCAGATCCAGCATGGAGAGT+TGG | 0.563903 | 3_4:-80813364 | Msa0526750:CDS |
| CTACAAATGATGAGAAGAAG+AGG | 0.565637 | 3_4:-80812581 | Msa0526750:CDS |
| ATTTAATTTACAGTGAGCAA+AGG | 0.569142 | 3_4:-80813806 | Msa0526750:five_prime_UTR |
| ACCAAAGTAGTAGAAGAAGA+AGG | 0.573800 | 3_4:+80812129 | None:intergenic |
| ATGGCCAAAAGATGAAGTGT+TGG | 0.578682 | 3_4:-80812028 | Msa0526750:CDS |
| ATATCATCAAAATCCAAAGA+AGG | 0.579812 | 3_4:+80811546 | None:intergenic |
| AAGAGGTTTATCAAGGTGGT+GGG | 0.581021 | 3_4:-80812746 | Msa0526750:CDS |
| TGATTATAAGGATCAAAAGG+AGG | 0.583124 | 3_4:+80813599 | None:intergenic |
| GATTATAAGGATCAAAAGGA+GGG | 0.583546 | 3_4:+80813600 | None:intergenic |
| AAAGAGGTGCAAAGAGAAGT+GGG | 0.586402 | 3_4:-80811884 | Msa0526750:CDS |
| GAGCTGGAAGAGGTTTATCA+AGG | 0.586678 | 3_4:-80812753 | Msa0526750:CDS |
| ATATAGTGAAATTACCAGCT+TGG | 0.588322 | 3_4:+80811613 | None:intergenic |
| TGAATTGGTGGAATTGGTCA+GGG | 0.590311 | 3_4:+80813693 | None:intergenic |
| AGTAGTAGAAGAAGAAGGAA+GGG | 0.592188 | 3_4:+80812134 | None:intergenic |
| CAAAATGGACCCTCGTGTAG+AGG | 0.592944 | 3_4:-80812670 | Msa0526750:CDS |
| GAGTGTGGTGAAGAAAATGA+TGG | 0.595280 | 3_4:-80812511 | Msa0526750:CDS |
| GGTAATTGGTGATGTTGAGA+AGG | 0.596580 | 3_4:+80813566 | None:intergenic |
| GTCCAAGGATCAATGAGTTG+AGG | 0.597929 | 3_4:+80813416 | None:intergenic |
| GAAATAGGGTTGTTCTTGCG+AGG | 0.598239 | 3_4:+80812099 | None:intergenic |
| TGTGAAATTCTCTCCCAAAG+TGG | 0.599247 | 3_4:+80811940 | None:intergenic |
| AGCTTGGAAGAAACAAGAGA+TGG | 0.599559 | 3_4:-80812412 | Msa0526750:CDS |
| AGATTAGGTTGAACTTGGAG+AGG | 0.605144 | 3_4:+80813545 | None:intergenic |
| TTTGAAGATCAGATCCAGCA+TGG | 0.607084 | 3_4:-80813372 | Msa0526750:CDS |
| CTTTGGGAGAGAATTTCACA+AGG | 0.610777 | 3_4:-80811937 | Msa0526750:CDS |
| GATGAAAACCAAGATGGTGC+TGG | 0.618902 | 3_4:-80811664 | Msa0526750:CDS |
| TCACTTGGGAACATGTCTCA+AGG | 0.620742 | 3_4:-80813331 | Msa0526750:intron |
| CTTGAATCCTCCTCTACACG+AGG | 0.620996 | 3_4:+80812660 | None:intergenic |
| AACAACAATGAAGAAAAGGA+AGG | 0.621045 | 3_4:-80811982 | Msa0526750:CDS |
| AATGGACCCTCGTGTAGAGG+AGG | 0.621916 | 3_4:-80812667 | Msa0526750:CDS |
| AGAACTTCATCATTAGTCCA+AGG | 0.625382 | 3_4:+80813401 | None:intergenic |
| AGAAAGCAATAACGTGAATG+TGG | 0.625602 | 3_4:-80811722 | Msa0526750:CDS |
| CAGGTGAGTCTTCTCAAGTG+GGG | 0.628435 | 3_4:-80811639 | Msa0526750:CDS |
| ATGCAGCAGGTTCATTATGG+AGG | 0.633386 | 3_4:-80811592 | Msa0526750:three_prime_UTR |
| TTGGTTCCCAGATTTCACTT+GGG | 0.635745 | 3_4:-80813345 | Msa0526750:CDS |
| CACAGGAAGCTAGCTGACGT+TGG | 0.645573 | 3_4:-80812894 | Msa0526750:intron |
| ACACAAGATGAAAACCAAGA+TGG | 0.647031 | 3_4:-80811670 | Msa0526750:CDS |
| GTAATTGGTGATGTTGAGAA+GGG | 0.648526 | 3_4:+80813567 | None:intergenic |
| CTGGAAGAGGTTTATCAAGG+TGG | 0.657958 | 3_4:-80812750 | Msa0526750:CDS |
| TGAGGCTGAAAAGGCGAACG+AGG | 0.666720 | 3_4:-80812700 | Msa0526750:CDS |
| TGTTGGCATTGATAAACTTG+AGG | 0.669533 | 3_4:-80812011 | Msa0526750:CDS |
| GATACAAGAGAAGTGCAAAG+AGG | 0.678975 | 3_4:-80811900 | Msa0526750:CDS |
| GGAAGGAAATAGCAACAACA+AGG | 0.682423 | 3_4:-80811965 | Msa0526750:CDS |
| GAATGTGGCTGAAGAAAATG+TGG | 0.683811 | 3_4:-80811707 | Msa0526750:CDS |
| TTGAATCCTCCTCTACACGA+GGG | 0.716390 | 3_4:+80812661 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTTAATGATTTGATTAAA+TGG | + | chr3_4:80811867-80811886 | None:intergenic | 15.0% |
| !!! | TCTATGATTAATTGTTTTTT+TGG | - | chr3_4:80812191-80812210 | Msa0526750:CDS | 15.0% |
| !!! | TTTTTGGATTTACATATTTA+CGG | - | chr3_4:80812207-80812226 | Msa0526750:CDS | 15.0% |
| !!! | AATCATAATCAAAATAGTTT+TGG | - | chr3_4:80812330-80812349 | Msa0526750:CDS | 15.0% |
| !!! | TGATATGTGTTTTTTTTTTT+TGG | - | chr3_4:80813780-80813799 | Msa0526750:five_prime_UTR | 15.0% |
| !! | TAGCTCACATTATTAATTAT+TGG | + | chr3_4:80811895-80811914 | None:intergenic | 20.0% |
| !!! | TATTAAAAAAAGTATCCATG+TGG | - | chr3_4:80812005-80812024 | Msa0526750:CDS | 20.0% |
| !!! | ATAGTTTTGGTAAGAATTTT+AGG | - | chr3_4:80812343-80812362 | Msa0526750:CDS | 20.0% |
| !! | ATTTAATTTACAGTGAGCAA+AGG | - | chr3_4:80811322-80811341 | Msa0526750:three_prime_UTR | 25.0% |
| !! | TGTTGATTATAAGGATCAAA+AGG | + | chr3_4:80811535-80811554 | None:intergenic | 25.0% |
| ! | TTAAGAAAAGAAGAAATTCG+TGG | + | chr3_4:80811952-80811971 | None:intergenic | 25.0% |
| !! | AATTCTGTTCCTTCAATTTT+TGG | + | chr3_4:80812110-80812129 | None:intergenic | 25.0% |
| ! | GAATAACAAAAATCTAGTTG+AGG | - | chr3_4:80812410-80812429 | Msa0526750:CDS | 25.0% |
| !! | TGATAGATTTGAAGTGTTTA+AGG | - | chr3_4:80812584-80812603 | Msa0526750:CDS | 25.0% |
| !! | GATAGATTTGAAGTGTTTAA+GGG | - | chr3_4:80812585-80812604 | Msa0526750:CDS | 25.0% |
| ! | TAAGGCTATATGAAGAAATA+GGG | + | chr3_4:80813046-80813065 | None:intergenic | 25.0% |
| ! | ATAAGGCTATATGAAGAAAT+AGG | + | chr3_4:80813047-80813066 | None:intergenic | 25.0% |
| ! | TTGAGCAATCTTTATAATCA+AGG | - | chr3_4:80813353-80813372 | Msa0526750:CDS | 25.0% |
| ! | ATATCATCAAAATCCAAAGA+AGG | + | chr3_4:80813585-80813604 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTTTTTTTGGTCA+AGG | - | chr3_4:80813786-80813805 | Msa0526750:five_prime_UTR | 25.0% |
| AGAGAAATAGATAGAGAGAA+GGG | - | chr3_4:80811255-80811274 | Msa0526750:three_prime_UTR | 30.0% | |
| CAAAGGAATTGAATAGAAGA+AGG | - | chr3_4:80811339-80811358 | Msa0526750:three_prime_UTR | 30.0% | |
| AAGTTCTTGGAGTTATGAAT+TGG | + | chr3_4:80811453-80811472 | None:intergenic | 30.0% | |
| !! | TATTGTTTGGTGTTGAAAGA+GGG | + | chr3_4:80811504-80811523 | None:intergenic | 30.0% |
| GATTATAAGGATCAAAAGGA+GGG | + | chr3_4:80811531-80811550 | None:intergenic | 30.0% | |
| TGATTATAAGGATCAAAAGG+AGG | + | chr3_4:80811532-80811551 | None:intergenic | 30.0% | |
| TTATCTTCATCATCTTTGTG+GGG | + | chr3_4:80811625-80811644 | None:intergenic | 30.0% | |
| CTTATCTTCATCATCTTTGT+GGG | + | chr3_4:80811626-80811645 | None:intergenic | 30.0% | |
| ATTTGGAAGTTGTTCATTGA+AGG | + | chr3_4:80811667-80811686 | None:intergenic | 30.0% | |
| GTCTTTGATCTCTTTCAATT+TGG | + | chr3_4:80811684-80811703 | None:intergenic | 30.0% | |
| TGATTAAATGGATGAAGTGA+AGG | + | chr3_4:80811855-80811874 | None:intergenic | 30.0% | |
| GAAATAGGACCAAAAATTGA+AGG | - | chr3_4:80812098-80812117 | Msa0526750:CDS | 30.0% | |
| TTCAAGAATGGATGATGTAT+TGG | - | chr3_4:80812485-80812504 | Msa0526750:CDS | 30.0% | |
| !!! | AGAGTTTTTTCAAGAGTTTC+CGG | + | chr3_4:80812945-80812964 | None:intergenic | 30.0% |
| CAACAACAACAATGAAGAAA+AGG | - | chr3_4:80813142-80813161 | Msa0526750:intron | 30.0% | |
| AACAACAATGAAGAAAAGGA+AGG | - | chr3_4:80813146-80813165 | Msa0526750:intron | 30.0% | |
| CAAGTACTTCAGAAAAACAA+AGG | - | chr3_4:80813277-80813296 | Msa0526750:intron | 30.0% | |
| GAAAAACAAAGGATGCTAAT+AGG | - | chr3_4:80813288-80813307 | Msa0526750:intron | 30.0% | |
| TTGCTCAATAGATGAAAGTA+AGG | + | chr3_4:80813341-80813360 | None:intergenic | 30.0% | |
| ATATAGTGAAATTACCAGCT+TGG | + | chr3_4:80813518-80813537 | None:intergenic | 30.0% | |
| ! | TTTTATGCATGTACCTTCTT+TGG | - | chr3_4:80813569-80813588 | Msa0526750:CDS | 30.0% |
| CAGAGAAATAGATAGAGAGA+AGG | - | chr3_4:80811254-80811273 | Msa0526750:three_prime_UTR | 35.0% | |
| CACAACACAAACATGTATGA+TGG | - | chr3_4:80811409-80811428 | Msa0526750:three_prime_UTR | 35.0% | |
| GAGTTATGAATTGGTGGAAT+TGG | + | chr3_4:80811444-80811463 | None:intergenic | 35.0% | |
| TTCTTGGAGTTATGAATTGG+TGG | + | chr3_4:80811450-80811469 | None:intergenic | 35.0% | |
| !! | GTATTGTTTGGTGTTGAAAG+AGG | + | chr3_4:80811505-80811524 | None:intergenic | 35.0% |
| !! | AAAGGAGGGAAAGTATTGTT+TGG | + | chr3_4:80811517-80811536 | None:intergenic | 35.0% |
| !!! | GGGTGGTTTTGTTGATTATA+AGG | + | chr3_4:80811544-80811563 | None:intergenic | 35.0% |
| !! | GTAATTGGTGATGTTGAGAA+GGG | + | chr3_4:80811564-80811583 | None:intergenic | 35.0% |
| TATCTTCATCATCTTTGTGG+GGG | + | chr3_4:80811624-80811643 | None:intergenic | 35.0% | |
| CCTTATCTTCATCATCTTTG+TGG | + | chr3_4:80811627-80811646 | None:intergenic | 35.0% | |
| CCACAAAGATGATGAAGATA+AGG | - | chr3_4:80811624-80811643 | Msa0526750:CDS | 35.0% | |
| AGAACTTCATCATTAGTCCA+AGG | + | chr3_4:80811730-80811749 | None:intergenic | 35.0% | |
| !!! | TTTTAGGTTTGTTACTGAGC+TGG | - | chr3_4:80812359-80812378 | Msa0526750:CDS | 35.0% |
| AAATCTAGTTGAGGCTGAAA+AGG | - | chr3_4:80812419-80812438 | Msa0526750:CDS | 35.0% | |
| GTCAAAGAAAAGTGAAGAAG+AGG | - | chr3_4:80812509-80812528 | Msa0526750:CDS | 35.0% | |
| CTACAAATGATGAGAAGAAG+AGG | - | chr3_4:80812547-80812566 | Msa0526750:CDS | 35.0% | |
| AGTTTAGTAGAGAAGAAGCT+TGG | - | chr3_4:80812700-80812719 | Msa0526750:CDS | 35.0% | |
| TGAAGATGACATTGAAGCTA+AGG | + | chr3_4:80812856-80812875 | None:intergenic | 35.0% | |
| TTTCAAGAGTTTCCGGATTA+GGG | + | chr3_4:80812938-80812957 | None:intergenic | 35.0% | |
| !! | TTTTCAAGAGTTTCCGGATT+AGG | + | chr3_4:80812939-80812958 | None:intergenic | 35.0% |
| AGTAGTAGAAGAAGAAGGAA+GGG | + | chr3_4:80812997-80813016 | None:intergenic | 35.0% | |
| AAGTAGTAGAAGAAGAAGGA+AGG | + | chr3_4:80812998-80813017 | None:intergenic | 35.0% | |
| TCCTTCTTCTTCTACTACTT+TGG | - | chr3_4:80812998-80813017 | Msa0526750:intron | 35.0% | |
| ACCAAAGTAGTAGAAGAAGA+AGG | + | chr3_4:80813002-80813021 | None:intergenic | 35.0% | |
| TTCTTCTTCTACTACTTTGG+TGG | - | chr3_4:80813001-80813020 | Msa0526750:intron | 35.0% | |
| ! | AATGCCAACACTTCATCTTT+TGG | + | chr3_4:80813107-80813126 | None:intergenic | 35.0% |
| !! | TGTTGGCATTGATAAACTTG+AGG | - | chr3_4:80813117-80813136 | Msa0526750:intron | 35.0% |
| GAGAATTTCACAAGGAATGT+TGG | - | chr3_4:80813199-80813218 | Msa0526750:intron | 35.0% | |
| CAAAGGATGCTAATAGGAAA+AGG | - | chr3_4:80813294-80813313 | Msa0526750:intron | 35.0% | |
| AGAAAGCAATAACGTGAATG+TGG | - | chr3_4:80813406-80813425 | Msa0526750:CDS | 35.0% | |
| ACACAAGATGAAAACCAAGA+TGG | - | chr3_4:80813458-80813477 | Msa0526750:CDS | 35.0% | |
| GTAATTTCACTATATGCAGC+AGG | - | chr3_4:80813523-80813542 | Msa0526750:CDS | 35.0% | |
| TATATGCAGCAGGTTCATTA+TGG | - | chr3_4:80813533-80813552 | Msa0526750:CDS | 35.0% | |
| ATAGATAGAGAGAAGGGTAG+AGG | - | chr3_4:80811261-80811280 | Msa0526750:three_prime_UTR | 40.0% | |
| TAGATAGAGAGAAGGGTAGA+GGG | - | chr3_4:80811262-80811281 | Msa0526750:three_prime_UTR | 40.0% | |
| TGAATTGGTGGAATTGGTCA+GGG | + | chr3_4:80811438-80811457 | None:intergenic | 40.0% | |
| ATGAATTGGTGGAATTGGTC+AGG | + | chr3_4:80811439-80811458 | None:intergenic | 40.0% | |
| ! | GGAAGTGATGATGAAGTTCT+TGG | + | chr3_4:80811466-80811485 | None:intergenic | 40.0% |
| !! | TTTGGTGTTGAAAGAGGGAA+AGG | + | chr3_4:80811499-80811518 | None:intergenic | 40.0% |
| !! | GGTAATTGGTGATGTTGAGA+AGG | + | chr3_4:80811565-80811584 | None:intergenic | 40.0% |
| GTTGAACTTGGAGAGGTAAT+TGG | + | chr3_4:80811579-80811598 | None:intergenic | 40.0% | |
| !! | AGATTAGGTTGAACTTGGAG+AGG | + | chr3_4:80811586-80811605 | None:intergenic | 40.0% |
| !! | GCAAGAGATTAGGTTGAACT+TGG | + | chr3_4:80811591-80811610 | None:intergenic | 40.0% |
| ! | TGTAAAGGGTGCAAGAGATT+AGG | + | chr3_4:80811601-80811620 | None:intergenic | 40.0% |
| TTCCTCAACTCATTGATCCT+TGG | - | chr3_4:80811710-80811729 | Msa0526750:CDS | 40.0% | |
| TTTGAAGATCAGATCCAGCA+TGG | - | chr3_4:80811756-80811775 | Msa0526750:CDS | 40.0% | |
| TTGGTTCCCAGATTTCACTT+GGG | - | chr3_4:80811783-80811802 | Msa0526750:CDS | 40.0% | |
| CATGTTCCCAAGTGAAATCT+GGG | + | chr3_4:80811792-80811811 | None:intergenic | 40.0% | |
| ACATGTTCCCAAGTGAAATC+TGG | + | chr3_4:80811793-80811812 | None:intergenic | 40.0% | |
| GTGTTTGTGAGCTGAATTGA+AGG | + | chr3_4:80812051-80812070 | None:intergenic | 40.0% | |
| !! | TTTTGGTCCTATTTCTCTCG+AGG | + | chr3_4:80812093-80812112 | None:intergenic | 40.0% |
| TACATATTTACGGTGTGCAC+AGG | - | chr3_4:80812217-80812236 | Msa0526750:CDS | 40.0% | |
| ! | ACGTAGTGCTGAAAAATGCA+AGG | - | chr3_4:80812263-80812282 | Msa0526750:CDS | 40.0% |
| AAGAGGTTTATCAAGGTGGT+GGG | - | chr3_4:80812382-80812401 | Msa0526750:CDS | 40.0% | |
| TGTAGAGGAGGATTCAAGAA+TGG | - | chr3_4:80812473-80812492 | Msa0526750:CDS | 40.0% | |
| GAAGAAGAGGTAGTTGAGAA+AGG | - | chr3_4:80812522-80812541 | Msa0526750:CDS | 40.0% | |
| GAGAAGAAGAGGAAAAGATC+AGG | - | chr3_4:80812558-80812577 | Msa0526750:CDS | 40.0% | |
| ! | TAAGGGTTTTTGTGAGAGTG+TGG | - | chr3_4:80812602-80812621 | Msa0526750:CDS | 40.0% |
| GAGTGTGGTGAAGAAAATGA+TGG | - | chr3_4:80812617-80812636 | Msa0526750:CDS | 40.0% | |
| AGCTTGGAAGAAACAAGAGA+TGG | - | chr3_4:80812716-80812735 | Msa0526750:CDS | 40.0% | |
| !! | GAACAAAGAGCTTGAGTTGA+TGG | - | chr3_4:80812746-80812765 | Msa0526750:CDS | 40.0% |
| GAGACGATATTGGTAGAAGA+TGG | - | chr3_4:80813081-80813100 | Msa0526750:intron | 40.0% | |
| ATGGCCAAAAGATGAAGTGT+TGG | - | chr3_4:80813100-80813119 | Msa0526750:intron | 40.0% | |
| GGAAGGAAATAGCAACAACA+AGG | - | chr3_4:80813163-80813182 | Msa0526750:intron | 40.0% | |
| TGTGAAATTCTCTCCCAAAG+TGG | + | chr3_4:80813191-80813210 | None:intergenic | 40.0% | |
| ! | CTTTGGGAGAGAATTTCACA+AGG | - | chr3_4:80813191-80813210 | Msa0526750:intron | 40.0% |
| TCACAAGGAATGTTGGAGTT+AGG | - | chr3_4:80813206-80813225 | Msa0526750:intron | 40.0% | |
| ! | GATACAAGAGAAGTGCAAAG+AGG | - | chr3_4:80813228-80813247 | Msa0526750:intron | 40.0% |
| ! | AAAGAGGTGCAAAGAGAAGT+GGG | - | chr3_4:80813244-80813263 | Msa0526750:intron | 40.0% |
| GAATGTGGCTGAAGAAAATG+TGG | - | chr3_4:80813421-80813440 | Msa0526750:CDS | 40.0% | |
| TAGTGAAATTACCAGCTTGG+AGG | + | chr3_4:80813515-80813534 | None:intergenic | 40.0% | |
| AGAGGGAAAGGTAAGTGAAG+AGG | + | chr3_4:80811487-80811506 | None:intergenic | 45.0% | |
| !! | ATTGGTGATGTTGAGAAGGG+TGG | + | chr3_4:80811561-80811580 | None:intergenic | 45.0% |
| ! | CATCTTTGTGGGGGTGTAAA+GGG | + | chr3_4:80811615-80811634 | None:intergenic | 45.0% |
| ! | TCATCTTTGTGGGGGTGTAA+AGG | + | chr3_4:80811616-80811635 | None:intergenic | 45.0% |
| GTCCAAGGATCAATGAGTTG+AGG | + | chr3_4:80811715-80811734 | None:intergenic | 45.0% | |
| ! | GTTGGTTCCCAGATTTCACT+TGG | - | chr3_4:80811782-80811801 | Msa0526750:CDS | 45.0% |
| TCACTTGGGAACATGTCTCA+AGG | - | chr3_4:80811797-80811816 | Msa0526750:CDS | 45.0% | |
| GTGTGTCTTTGTCTACCACA+TGG | + | chr3_4:80812023-80812042 | None:intergenic | 45.0% | |
| ACACACACCTCGAGAGAAAT+AGG | - | chr3_4:80812083-80812102 | Msa0526750:CDS | 45.0% | |
| ! | GTTTGTTACTGAGCTGGAAG+AGG | - | chr3_4:80812365-80812384 | Msa0526750:CDS | 45.0% |
| GAGCTGGAAGAGGTTTATCA+AGG | - | chr3_4:80812375-80812394 | Msa0526750:CDS | 45.0% | |
| CTGGAAGAGGTTTATCAAGG+TGG | - | chr3_4:80812378-80812397 | Msa0526750:CDS | 45.0% | |
| GAAGAGGTTTATCAAGGTGG+TGG | - | chr3_4:80812381-80812400 | Msa0526750:CDS | 45.0% | |
| AGAGGTTTATCAAGGTGGTG+GGG | - | chr3_4:80812383-80812402 | Msa0526750:CDS | 45.0% | |
| GAACGAGGTGCAAGACAAAA+TGG | - | chr3_4:80812443-80812462 | Msa0526750:CDS | 45.0% | |
| TTGAATCCTCCTCTACACGA+GGG | + | chr3_4:80812470-80812489 | None:intergenic | 45.0% | |
| GCACATGAACAAGCTATTGC+TGG | - | chr3_4:80812768-80812787 | Msa0526750:CDS | 45.0% | |
| GCACTCACAAAACCCTAATC+CGG | - | chr3_4:80812923-80812942 | Msa0526750:intron | 45.0% | |
| GAGCTAGGGTTTACAGGTAT+TGG | + | chr3_4:80812972-80812991 | None:intergenic | 45.0% | |
| AAGAAGGAAGGGTTGAGCTA+GGG | + | chr3_4:80812986-80813005 | None:intergenic | 45.0% | |
| GAAATAGGGTTGTTCTTGCG+AGG | + | chr3_4:80813032-80813051 | None:intergenic | 45.0% | |
| ! | CAACAACAAGGCACCACTTT+GGG | - | chr3_4:80813175-80813194 | Msa0526750:intron | 45.0% |
| ! | CAAAGAGGTGCAAAGAGAAG+TGG | - | chr3_4:80813243-80813262 | Msa0526750:intron | 45.0% |
| GATGAAAACCAAGATGGTGC+TGG | - | chr3_4:80813464-80813483 | Msa0526750:CDS | 45.0% | |
| ATGCAGCAGGTTCATTATGG+AGG | - | chr3_4:80813536-80813555 | Msa0526750:CDS | 45.0% | |
| TCAGATCCAGCATGGAGAGT+TGG | - | chr3_4:80811764-80811783 | Msa0526750:CDS | 50.0% | |
| ! | GAGGTTTATCAAGGTGGTGG+GGG | - | chr3_4:80812384-80812403 | Msa0526750:CDS | 50.0% |
| CAAAATGGACCCTCGTGTAG+AGG | - | chr3_4:80812458-80812477 | Msa0526750:CDS | 50.0% | |
| CTTGAATCCTCCTCTACACG+AGG | + | chr3_4:80812471-80812490 | None:intergenic | 50.0% | |
| AGGGTTGAGCTAGGGTTTAC+AGG | + | chr3_4:80812978-80812997 | None:intergenic | 50.0% | |
| GAAGAAGGAAGGGTTGAGCT+AGG | + | chr3_4:80812987-80813006 | None:intergenic | 50.0% | |
| CTCTCTCGCTGCTCGATATA+AGG | + | chr3_4:80813064-80813083 | None:intergenic | 50.0% | |
| AGCAGCGAGAGAGACGATAT+TGG | - | chr3_4:80813071-80813090 | Msa0526750:intron | 50.0% | |
| ! | GCAACAACAAGGCACCACTT+TGG | - | chr3_4:80813174-80813193 | Msa0526750:intron | 50.0% |
| TGCAGGTGAGTCTTCTCAAG+TGG | - | chr3_4:80813487-80813506 | Msa0526750:CDS | 50.0% | |
| GCAGGTGAGTCTTCTCAAGT+GGG | - | chr3_4:80813488-80813507 | Msa0526750:CDS | 50.0% | |
| CAGGTGAGTCTTCTCAAGTG+GGG | - | chr3_4:80813489-80813508 | Msa0526750:CDS | 50.0% | |
| TGGGAACCAACTCTCCATGC+TGG | + | chr3_4:80811773-80811792 | None:intergenic | 55.0% | |
| CACAGGAAGCTAGCTGACGT+TGG | - | chr3_4:80812234-80812253 | Msa0526750:CDS | 55.0% | |
| TGAGGCTGAAAAGGCGAACG+AGG | - | chr3_4:80812428-80812447 | Msa0526750:CDS | 55.0% | |
| AATGGACCCTCGTGTAGAGG+AGG | - | chr3_4:80812461-80812480 | Msa0526750:CDS | 55.0% | |
| !! | AACCAAGATGGTGCTGGTGC+AGG | - | chr3_4:80813470-80813489 | Msa0526750:CDS | 55.0% |
| CTCTCGAGGTGTGTGTCTCG+TGG | + | chr3_4:80812079-80812098 | None:intergenic | 60.0% | |
| CACCTGCACCAGCACCATCT+TGG | + | chr3_4:80813475-80813494 | None:intergenic | 60.0% | |
| CTCAAGTGGGGCCTCCAAGC+TGG | - | chr3_4:80813501-80813520 | Msa0526750:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 80811249 | 80813901 | 80811249 | ID=Msa0526750;Name=Msa0526750 |
| chr3_4 | mRNA | 80811249 | 80813901 | 80811249 | ID=Msa0526750-mRNA-1;Parent=Msa0526750;Name=Msa0526750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=172|1|1|1|1|1|2|375|561 |
| chr3_4 | exon | 80811249 | 80812911 | 80811249 | ID=Msa0526750-mRNA-1:exon:24312;Parent=Msa0526750-mRNA-1 |
| chr3_4 | exon | 80813332 | 80813901 | 80813332 | ID=Msa0526750-mRNA-1:exon:24311;Parent=Msa0526750-mRNA-1 |
| chr3_4 | five_prime_UTR | 80813730 | 80813901 | 80813730 | ID=Msa0526750-mRNA-1:five_prime_utr;Parent=Msa0526750-mRNA-1 |
| chr3_4 | CDS | 80813332 | 80813729 | 80813332 | ID=Msa0526750-mRNA-1:cds;Parent=Msa0526750-mRNA-1 |
| chr3_4 | CDS | 80811624 | 80812911 | 80811624 | ID=Msa0526750-mRNA-1:cds;Parent=Msa0526750-mRNA-1 |
| chr3_4 | three_prime_UTR | 80811249 | 80811623 | 80811249 | ID=Msa0526750-mRNA-1:three_prime_utr;Parent=Msa0526750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
