Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370600 | XP_013460895.1 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 9.24e-156 | 440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370600 | A0A072UYT0 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 4.41e-156 | 440 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0370600 | 0.813707 | 2.233155e-51 | -8.615850e-47 |
| Msa0004360 | Msa0370600 | 0.819420 | 1.172194e-52 | -8.615850e-47 |
| Msa0005050 | Msa0370600 | 0.835530 | 1.590205e-56 | -8.615850e-47 |
| Msa0016120 | Msa0370600 | 0.826518 | 2.595994e-54 | -8.615850e-47 |
| Msa0017120 | Msa0370600 | 0.815503 | 8.941601e-52 | -8.615850e-47 |
| Msa0018220 | Msa0370600 | 0.820446 | 6.831474e-53 | -8.615850e-47 |
| Msa0021410 | Msa0370600 | 0.805756 | 1.144869e-49 | -8.615850e-47 |
| Msa0022640 | Msa0370600 | 0.812137 | 4.932310e-51 | -8.615850e-47 |
| Msa0024680 | Msa0370600 | 0.836551 | 8.759565e-57 | -8.615850e-47 |
| Msa0029620 | Msa0370600 | 0.803164 | 3.972034e-49 | -8.615850e-47 |
| Msa0030310 | Msa0370600 | 0.801353 | 9.370483e-49 | -8.615850e-47 |
| Msa0032120 | Msa0370600 | 0.807686 | 4.478344e-50 | -8.615850e-47 |
| Msa0032400 | Msa0370600 | 0.809113 | 2.221740e-50 | -8.615850e-47 |
| Msa0036430 | Msa0370600 | 0.822787 | 1.964938e-53 | -8.615850e-47 |
| Msa0043210 | Msa0370600 | 0.810506 | 1.114603e-50 | -8.615850e-47 |
| Msa0043940 | Msa0370600 | 0.802943 | 4.412831e-49 | -8.615850e-47 |
| Msa0048020 | Msa0370600 | 0.826375 | 2.807917e-54 | -8.615850e-47 |
| Msa0050040 | Msa0370600 | 0.819598 | 1.067770e-52 | -8.615850e-47 |
| Msa0052460 | Msa0370600 | 0.831774 | 1.379418e-55 | -8.615850e-47 |
| Msa0053110 | Msa0370600 | 0.843408 | 1.426984e-58 | -8.615850e-47 |
| Msa0064820 | Msa0370600 | 0.814070 | 1.857457e-51 | -8.615850e-47 |
| Msa0072810 | Msa0370600 | 0.817006 | 4.124697e-52 | -8.615850e-47 |
| Msa0077410 | Msa0370600 | 0.845316 | 4.383224e-59 | -8.615850e-47 |
| Msa0079770 | Msa0370600 | 0.805618 | 1.223787e-49 | -8.615850e-47 |
| Msa0083920 | Msa0370600 | 0.807081 | 6.015643e-50 | -8.615850e-47 |
| Msa0084000 | Msa0370600 | 0.800817 | 1.206145e-48 | -8.615850e-47 |
| Msa0084500 | Msa0370600 | 0.815175 | 1.057822e-51 | -8.615850e-47 |
| Msa0092710 | Msa0370600 | 0.800878 | 1.172183e-48 | -8.615850e-47 |
| Msa0094420 | Msa0370600 | 0.809046 | 2.296513e-50 | -8.615850e-47 |
| Msa0097050 | Msa0370600 | 0.823623 | 1.253697e-53 | -8.615850e-47 |
| Msa0098440 | Msa0370600 | 0.857921 | 1.173916e-62 | -8.615850e-47 |
| Msa0102990 | Msa0370600 | 0.820153 | 7.972734e-53 | -8.615850e-47 |
| Msa0103000 | Msa0370600 | 0.813123 | 3.000964e-51 | -8.615850e-47 |
| Msa0106790 | Msa0370600 | 0.812946 | 3.282602e-51 | -8.615850e-47 |
| Msa0109950 | Msa0370600 | 0.829984 | 3.790142e-55 | -8.615850e-47 |
| Msa0120330 | Msa0370600 | 0.817156 | 3.817056e-52 | -8.615850e-47 |
| Msa0130570 | Msa0370600 | 0.821581 | 3.741843e-53 | -8.615850e-47 |
| Msa0134040 | Msa0370600 | 0.822704 | 2.054169e-53 | -8.615850e-47 |
| Msa0134130 | Msa0370600 | 0.820525 | 6.549466e-53 | -8.615850e-47 |
| Msa0135980 | Msa0370600 | 0.802696 | 4.963562e-49 | -8.615850e-47 |
| Msa0137150 | Msa0370600 | 0.808390 | 3.171652e-50 | -8.615850e-47 |
| Msa0139900 | Msa0370600 | 0.863020 | 3.352709e-64 | -8.615850e-47 |
| Msa0141430 | Msa0370600 | 0.825049 | 5.792238e-54 | -8.615850e-47 |
| Msa0141600 | Msa0370600 | 0.823175 | 1.595402e-53 | -8.615850e-47 |
| Msa0141830 | Msa0370600 | 0.801515 | 8.682930e-49 | -8.615850e-47 |
| Msa0143970 | Msa0370600 | 0.802994 | 4.307176e-49 | -8.615850e-47 |
| Msa0146470 | Msa0370600 | 0.805691 | 1.181465e-49 | -8.615850e-47 |
| Msa0147560 | Msa0370600 | 0.817699 | 2.879105e-52 | -8.615850e-47 |
| Msa0153420 | Msa0370600 | 0.829713 | 4.413911e-55 | -8.615850e-47 |
| Msa0157020 | Msa0370600 | 0.815571 | 8.636095e-52 | -8.615850e-47 |
| Msa0161100 | Msa0370600 | 0.821816 | 3.302484e-53 | -8.615850e-47 |
| Msa0161680 | Msa0370600 | 0.816755 | 4.694831e-52 | -8.615850e-47 |
| Msa0172350 | Msa0370600 | 0.831208 | 1.901113e-55 | -8.615850e-47 |
| Msa0172960 | Msa0370600 | -0.801856 | 7.390487e-49 | -8.615850e-47 |
| Msa0176470 | Msa0370600 | 0.806174 | 9.351664e-50 | -8.615850e-47 |
| Msa0181090 | Msa0370600 | 0.816732 | 4.752943e-52 | -8.615850e-47 |
| Msa0183610 | Msa0370600 | 0.805675 | 1.190364e-49 | -8.615850e-47 |
| Msa0183620 | Msa0370600 | 0.812994 | 3.202942e-51 | -8.615850e-47 |
| Msa0184990 | Msa0370600 | 0.805554 | 1.262122e-49 | -8.615850e-47 |
| Msa0185700 | Msa0370600 | 0.805137 | 1.543134e-49 | -8.615850e-47 |
| Msa0199710 | Msa0370600 | 0.810915 | 9.090367e-51 | -8.615850e-47 |
| Msa0200970 | Msa0370600 | 0.846998 | 1.526678e-59 | -8.615850e-47 |
| Msa0203030 | Msa0370600 | 0.818977 | 1.479153e-52 | -8.615850e-47 |
| Msa0203160 | Msa0370600 | 0.836054 | 1.171721e-56 | -8.615850e-47 |
| Msa0206120 | Msa0370600 | 0.820676 | 6.049576e-53 | -8.615850e-47 |
| Msa0207000 | Msa0370600 | 0.801393 | 9.199096e-49 | -8.615850e-47 |
| Msa0207180 | Msa0370600 | 0.821047 | 4.968919e-53 | -8.615850e-47 |
| Msa0212370 | Msa0370600 | 0.801344 | 9.413751e-49 | -8.615850e-47 |
| Msa0219190 | Msa0370600 | 0.861038 | 1.358652e-63 | -8.615850e-47 |
| Msa0219660 | Msa0370600 | 0.808615 | 2.838510e-50 | -8.615850e-47 |
| Msa0227500 | Msa0370600 | 0.812930 | 3.309041e-51 | -8.615850e-47 |
| Msa0369570 | Msa0370600 | 0.801270 | 9.745553e-49 | -8.615850e-47 |
| Msa0370600 | Msa0378340 | 0.809674 | 1.683741e-50 | -8.615850e-47 |
| Msa0370600 | Msa0378500 | 0.800869 | 1.177114e-48 | -8.615850e-47 |
| Msa0370600 | Msa0380060 | 0.824583 | 7.462479e-54 | -8.615850e-47 |
| Msa0370600 | Msa0380920 | 0.803475 | 3.425584e-49 | -8.615850e-47 |
| Msa0370600 | Msa0382560 | 0.831869 | 1.307276e-55 | -8.615850e-47 |
| Msa0370600 | Msa0398590 | 0.852473 | 4.511221e-61 | -8.615850e-47 |
| Msa0370600 | Msa0408630 | 0.821967 | 3.046214e-53 | -8.615850e-47 |
| Msa0370600 | Msa0408640 | 0.859629 | 3.623027e-63 | -8.615850e-47 |
| Msa0370600 | Msa0413930 | 0.822888 | 1.861582e-53 | -8.615850e-47 |
| Msa0370600 | Msa0418200 | 0.986987 | 1.162504e-168 | -8.615850e-47 |
| Msa0370600 | Msa0427690 | 0.809485 | 1.848553e-50 | -8.615850e-47 |
| Msa0370600 | Msa0429270 | 0.807055 | 6.092527e-50 | -8.615850e-47 |
| Msa0370600 | Msa0430820 | 0.808454 | 3.072962e-50 | -8.615850e-47 |
| Msa0370600 | Msa0436450 | 0.800404 | 1.464076e-48 | -8.615850e-47 |
| Msa0370600 | Msa0436460 | 0.813463 | 2.527760e-51 | -8.615850e-47 |
| Msa0370600 | Msa0436500 | 0.866618 | 2.499392e-65 | -8.615850e-47 |
| Msa0370600 | Msa0444010 | 0.814763 | 1.305127e-51 | -8.615850e-47 |
| Msa0370600 | Msa0453520 | 0.809988 | 1.440911e-50 | -8.615850e-47 |
| Msa0370600 | Msa0457870 | 0.824850 | 6.455770e-54 | -8.615850e-47 |
| Msa0370600 | Msa0458950 | 0.809827 | 1.561031e-50 | -8.615850e-47 |
| Msa0370600 | Msa0464540 | 0.936633 | 1.271299e-97 | -8.615850e-47 |
| Msa0370600 | Msa0508400 | 0.805261 | 1.454015e-49 | -8.615850e-47 |
| Msa0370600 | Msa0510230 | 0.811941 | 5.443051e-51 | -8.615850e-47 |
| Msa0370600 | Msa0510440 | 0.800812 | 1.208898e-48 | -8.615850e-47 |
| Msa0370600 | Msa0518520 | 0.809522 | 1.815531e-50 | -8.615850e-47 |
| Msa0370600 | Msa0519200 | 0.846582 | 1.984413e-59 | -8.615850e-47 |
| Msa0370600 | Msa0524210 | 0.826248 | 3.010321e-54 | -8.615850e-47 |
| Msa0370600 | Msa0525240 | 0.822230 | 2.647348e-53 | -8.615850e-47 |
| Msa0370600 | Msa0526700 | 0.820301 | 7.375421e-53 | -8.615850e-47 |
| Msa0370600 | Msa0526710 | 0.823603 | 1.267525e-53 | -8.615850e-47 |
| Msa0370600 | Msa0527590 | 0.810529 | 1.101921e-50 | -8.615850e-47 |
| Msa0370600 | Msa0527600 | 0.826600 | 2.481716e-54 | -8.615850e-47 |
| Msa0370600 | Msa0528940 | 0.803486 | 3.406583e-49 | -8.615850e-47 |
| Msa0370600 | Msa0532840 | 0.829697 | 4.453648e-55 | -8.615850e-47 |
| Msa0370600 | Msa0533010 | 0.831839 | 1.329819e-55 | -8.615850e-47 |
| Msa0370600 | Msa0537270 | 0.845882 | 3.076689e-59 | -8.615850e-47 |
| Msa0370600 | Msa0537920 | 0.842853 | 2.006703e-58 | -8.615850e-47 |
| Msa0370600 | Msa0538220 | 0.842861 | 1.996919e-58 | -8.615850e-47 |
| Msa0370600 | Msa0538570 | 0.859468 | 4.049830e-63 | -8.615850e-47 |
| Msa0370600 | Msa0543850 | 0.878401 | 2.893514e-69 | -8.615850e-47 |
| Msa0370600 | Msa0546380 | 0.827688 | 1.362776e-54 | -8.615850e-47 |
| Msa0370600 | Msa0546740 | 0.804988 | 1.657938e-49 | -8.615850e-47 |
| Msa0370600 | Msa0547050 | 0.821213 | 4.549625e-53 | -8.615850e-47 |
| Msa0370600 | Msa0561510 | 0.825671 | 4.127909e-54 | -8.615850e-47 |
| Msa0370600 | Msa0575250 | 0.825023 | 5.877345e-54 | -8.615850e-47 |
| Msa0370600 | Msa0581340 | 0.812360 | 4.408753e-51 | -8.615850e-47 |
| Msa0370600 | Msa0585730 | 0.810678 | 1.022899e-50 | -8.615850e-47 |
| Msa0370600 | Msa0590680 | 0.805095 | 1.574838e-49 | -8.615850e-47 |
| Msa0370600 | Msa0593710 | 0.830751 | 2.461513e-55 | -8.615850e-47 |
| Msa0370600 | Msa0594390 | 0.867297 | 1.517848e-65 | -8.615850e-47 |
| Msa0370600 | Msa0599690 | 0.827119 | 1.865319e-54 | -8.615850e-47 |
| Msa0370600 | Msa0600390 | 0.822530 | 2.255540e-53 | -8.615850e-47 |
| Msa0370600 | Msa0601110 | 0.847879 | 8.743686e-60 | -8.615850e-47 |
| Msa0370600 | Msa0601120 | 0.842966 | 1.872408e-58 | -8.615850e-47 |
| Msa0370600 | Msa0602800 | 0.819861 | 9.297328e-53 | -8.615850e-47 |
| Msa0370600 | Msa0603680 | 0.804565 | 2.032659e-49 | -8.615850e-47 |
| Msa0370600 | Msa0607480 | 0.805988 | 1.023321e-49 | -8.615850e-47 |
| Msa0370600 | Msa0614230 | 0.808166 | 3.539129e-50 | -8.615850e-47 |
| Msa0370600 | Msa0618170 | 0.807307 | 5.389360e-50 | -8.615850e-47 |
| Msa0370600 | Msa0619330 | 0.810762 | 9.812054e-51 | -8.615850e-47 |
| Msa0370600 | Msa0619980 | 0.807917 | 3.998045e-50 | -8.615850e-47 |
| Msa0370600 | Msa0621770 | 0.811373 | 7.232756e-51 | -8.615850e-47 |
| Msa0370600 | Msa0625890 | 0.810562 | 1.083672e-50 | -8.615850e-47 |
| Msa0370600 | Msa0633750 | 0.816454 | 5.485908e-52 | -8.615850e-47 |
| Msa0370600 | Msa0634270 | 0.843919 | 1.041779e-58 | -8.615850e-47 |
| Msa0370600 | Msa0640880 | 0.814074 | 1.854425e-51 | -8.615850e-47 |
| Msa0370600 | Msa0641250 | 0.818306 | 2.099324e-52 | -8.615850e-47 |
| Msa0370600 | Msa0641620 | 0.844751 | 6.225977e-59 | -8.615850e-47 |
| Msa0370600 | Msa0642650 | 0.837114 | 6.293077e-57 | -8.615850e-47 |
| Msa0370600 | Msa0642910 | 0.830088 | 3.575783e-55 | -8.615850e-47 |
| Msa0370600 | Msa0645050 | 0.814704 | 1.345298e-51 | -8.615850e-47 |
| Msa0370600 | Msa0647800 | 0.802486 | 5.484252e-49 | -8.615850e-47 |
| Msa0370600 | Msa0652980 | 0.818816 | 1.608895e-52 | -8.615850e-47 |
| Msa0370600 | Msa0663590 | 0.808434 | 3.103508e-50 | -8.615850e-47 |
| Msa0370600 | Msa0663680 | 0.829270 | 5.654587e-55 | -8.615850e-47 |
| Msa0370600 | Msa0665910 | -0.809376 | 1.950852e-50 | -8.615850e-47 |
| Msa0370600 | Msa0669840 | 0.808277 | 3.352452e-50 | -8.615850e-47 |
| Msa0370600 | Msa0672110 | 0.808365 | 3.209747e-50 | -8.615850e-47 |
| Msa0370600 | Msa0678890 | 0.876059 | 1.886051e-68 | -8.615850e-47 |
| Msa0370600 | Msa0680150 | 0.865807 | 4.516333e-65 | -8.615850e-47 |
| Msa0370600 | Msa0681890 | 0.827012 | 1.978841e-54 | -8.615850e-47 |
| Msa0370600 | Msa0682400 | 0.817255 | 3.624870e-52 | -8.615850e-47 |
| Msa0370600 | Msa0685330 | 0.816148 | 6.419806e-52 | -8.615850e-47 |
| Msa0370600 | Msa0688500 | 0.852831 | 3.566129e-61 | -8.615850e-47 |
| Msa0370600 | Msa0688540 | 0.817625 | 2.992039e-52 | -8.615850e-47 |
| Msa0370600 | Msa0691160 | 0.834539 | 2.826576e-56 | -8.615850e-47 |
| Msa0370600 | Msa0700910 | 0.822851 | 1.898684e-53 | -8.615850e-47 |
| Msa0370600 | Msa0703720 | 0.801593 | 8.369644e-49 | -8.615850e-47 |
| Msa0370600 | Msa0707220 | 0.853302 | 2.613947e-61 | -8.615850e-47 |
| Msa0370600 | Msa0716790 | 0.823533 | 1.316377e-53 | -8.615850e-47 |
| Msa0370600 | Msa0716800 | 0.807442 | 5.045073e-50 | -8.615850e-47 |
| Msa0370600 | Msa0720040 | 0.831457 | 1.651237e-55 | -8.615850e-47 |
| Msa0370600 | Msa0720270 | 0.813760 | 2.174613e-51 | -8.615850e-47 |
| Msa0370600 | Msa0722940 | 0.879262 | 1.438176e-69 | -8.615850e-47 |
| Msa0370600 | Msa0723150 | 0.878813 | 2.072214e-69 | -8.615850e-47 |
| Msa0370600 | Msa0730180 | 0.819057 | 1.418591e-52 | -8.615850e-47 |
| Msa0370600 | Msa0740420 | 0.801720 | 7.880632e-49 | -8.615850e-47 |
| Msa0370600 | Msa0741900 | 0.834458 | 2.963187e-56 | -8.615850e-47 |
| Msa0370600 | Msa0747780 | 0.850227 | 1.946065e-60 | -8.615850e-47 |
| Msa0370600 | Msa0757870 | 0.840706 | 7.399865e-58 | -8.615850e-47 |
| Msa0370600 | Msa0760840 | 0.807971 | 3.894286e-50 | -8.615850e-47 |
| Msa0370600 | Msa0761580 | 0.878296 | 3.149395e-69 | -8.615850e-47 |
| Msa0370600 | Msa0764820 | 0.818311 | 2.093956e-52 | -8.615850e-47 |
| Msa0370600 | Msa0772020 | 0.807295 | 5.421134e-50 | -8.615850e-47 |
| Msa0370600 | Msa0799210 | 0.841819 | 3.770111e-58 | -8.615850e-47 |
| Msa0370600 | Msa0802840 | 0.806630 | 7.494466e-50 | -8.615850e-47 |
| Msa0370600 | Msa0803130 | 0.823335 | 1.464176e-53 | -8.615850e-47 |
| Msa0370600 | Msa0810020 | 0.832886 | 7.317968e-56 | -8.615850e-47 |
| Msa0370600 | Msa0820670 | 0.820975 | 5.162219e-53 | -8.615850e-47 |
| Msa0370600 | Msa0822990 | 0.823360 | 1.444655e-53 | -8.615850e-47 |
| Msa0370600 | Msa0833040 | 0.800723 | 1.260578e-48 | -8.615850e-47 |
| Msa0370600 | Msa0841490 | 0.820889 | 5.403210e-53 | -8.615850e-47 |
| Msa0370600 | Msa0843290 | 0.827098 | 1.887366e-54 | -8.615850e-47 |
| Msa0370600 | Msa0850500 | 0.830413 | 2.978739e-55 | -8.615850e-47 |
| Msa0370600 | Msa0852730 | 0.803488 | 3.404481e-49 | -8.615850e-47 |
| Msa0370600 | Msa0855310 | 0.805897 | 1.069481e-49 | -8.615850e-47 |
| Msa0370600 | Msa0862100 | 0.830511 | 2.818913e-55 | -8.615850e-47 |
| Msa0370600 | Msa0867350 | 0.850267 | 1.896986e-60 | -8.615850e-47 |
| Msa0370600 | Msa0872310 | 0.875617 | 2.675780e-68 | -8.615850e-47 |
| Msa0370600 | Msa0873190 | 0.856938 | 2.293685e-62 | -8.615850e-47 |
| Msa0370600 | Msa0877420 | 0.807073 | 6.039313e-50 | -8.615850e-47 |
| Msa0370600 | Msa0885060 | 0.851845 | 6.804085e-61 | -8.615850e-47 |
| Msa0370600 | Msa0890250 | 0.805103 | 1.568802e-49 | -8.615850e-47 |
| Msa0370600 | Msa0898730 | 0.841417 | 4.812389e-58 | -8.615850e-47 |
| Msa0370600 | Msa0903330 | 0.803942 | 2.739778e-49 | -8.615850e-47 |
| Msa0370600 | Msa0905550 | 0.881493 | 2.293925e-70 | -8.615850e-47 |
| Msa0370600 | Msa0911990 | 0.803727 | 3.036726e-49 | -8.615850e-47 |
| Msa0370600 | Msa0925160 | 0.818556 | 1.843269e-52 | -8.615850e-47 |
| Msa0370600 | Msa0929870 | 0.806717 | 7.181706e-50 | -8.615850e-47 |
| Msa0370600 | Msa0930330 | 0.852185 | 5.447737e-61 | -8.615850e-47 |
| Msa0370600 | Msa0931480 | 0.859969 | 2.862093e-63 | -8.615850e-47 |
| Msa0370600 | Msa0931610 | 0.840189 | 1.009775e-57 | -8.615850e-47 |
| Msa0370600 | Msa0937550 | 0.877554 | 5.725012e-69 | -8.615850e-47 |
| Msa0370600 | Msa0937940 | 0.801953 | 7.059475e-49 | -8.615850e-47 |
| Msa0370600 | Msa0938430 | 0.849196 | 3.776532e-60 | -8.615850e-47 |
| Msa0370600 | Msa0941750 | 0.802709 | 4.933334e-49 | -8.615850e-47 |
| Msa0370600 | Msa0942730 | 0.807525 | 4.845050e-50 | -8.615850e-47 |
| Msa0370600 | Msa0951460 | 0.880356 | 5.873514e-70 | -8.615850e-47 |
| Msa0370600 | Msa0951960 | 0.875275 | 3.502772e-68 | -8.615850e-47 |
| Msa0370600 | Msa0955260 | 0.812424 | 4.268748e-51 | -8.615850e-47 |
| Msa0370600 | Msa0958020 | 0.816205 | 6.236218e-52 | -8.615850e-47 |
| Msa0370600 | Msa0974750 | 0.885977 | 5.104732e-72 | -8.615850e-47 |
| Msa0370600 | Msa0975580 | 0.838477 | 2.809911e-57 | -8.615850e-47 |
| Msa0370600 | Msa0990520 | 0.814200 | 1.738718e-51 | -8.615850e-47 |
| Msa0370600 | Msa1002040 | 0.817452 | 3.273841e-52 | -8.615850e-47 |
| Msa0370600 | Msa1004500 | 0.849743 | 2.658358e-60 | -8.615850e-47 |
| Msa0370600 | Msa1004520 | 0.850955 | 1.214540e-60 | -8.615850e-47 |
| Msa0370600 | Msa1006860 | 0.801015 | 1.099170e-48 | -8.615850e-47 |
| Msa0370600 | Msa1007350 | 0.834499 | 2.893533e-56 | -8.615850e-47 |
| Msa0370600 | Msa1009860 | 0.803831 | 2.889271e-49 | -8.615850e-47 |
| Msa0370600 | Msa1014270 | 0.866917 | 2.007372e-65 | -8.615850e-47 |
| Msa0370600 | Msa1018790 | 0.822042 | 2.926867e-53 | -8.615850e-47 |
| Msa0370600 | Msa1027790 | 0.823954 | 1.048607e-53 | -8.615850e-47 |
| Msa0370600 | Msa1032450 | 0.847228 | 1.320483e-59 | -8.615850e-47 |
| Msa0370600 | Msa1033560 | 0.835856 | 1.315115e-56 | -8.615850e-47 |
| Msa0370600 | Msa1037900 | 0.817114 | 3.900472e-52 | -8.615850e-47 |
| Msa0370600 | Msa1037920 | 0.828171 | 1.042415e-54 | -8.615850e-47 |
| Msa0370600 | Msa1041530 | 0.881453 | 2.369721e-70 | -8.615850e-47 |
| Msa0370600 | Msa1042670 | 0.825136 | 5.526681e-54 | -8.615850e-47 |
| Msa0370600 | Msa1044340 | 0.838829 | 2.279582e-57 | -8.615850e-47 |
| Msa0370600 | Msa1045780 | 0.802432 | 5.627322e-49 | -8.615850e-47 |
| Msa0370600 | Msa1045880 | 0.835178 | 1.951600e-56 | -8.615850e-47 |
| Msa0370600 | Msa1045970 | 0.838754 | 2.383594e-57 | -8.615850e-47 |
| Msa0370600 | Msa1046870 | 0.851555 | 8.224822e-61 | -8.615850e-47 |
| Msa0370600 | Msa1048710 | 0.804667 | 1.935338e-49 | -8.615850e-47 |
| Msa0370600 | Msa1055260 | 0.851167 | 1.058844e-60 | -8.615850e-47 |
| Msa0370600 | Msa1055280 | 0.852853 | 3.514976e-61 | -8.615850e-47 |
| Msa0370600 | Msa1055500 | 0.801716 | 7.895269e-49 | -8.615850e-47 |
| Msa0370600 | Msa1061180 | 0.812498 | 4.113223e-51 | -8.615850e-47 |
| Msa0370600 | Msa1061500 | 0.821211 | 4.555736e-53 | -8.615850e-47 |
| Msa0370600 | Msa1072080 | 0.801225 | 9.957111e-49 | -8.615850e-47 |
| Msa0370600 | Msa1073340 | 0.801035 | 1.088591e-48 | -8.615850e-47 |
| Msa0370600 | Msa1073350 | 0.808464 | 3.058262e-50 | -8.615850e-47 |
| Msa0370600 | Msa1081570 | 0.874754 | 5.274780e-68 | -8.615850e-47 |
| Msa0370600 | Msa1100490 | 0.802284 | 6.034828e-49 | -8.615850e-47 |
| Msa0370600 | Msa1100700 | 0.812853 | 3.439200e-51 | -8.615850e-47 |
| Msa0370600 | Msa1106560 | 0.810122 | 1.348777e-50 | -8.615850e-47 |
| Msa0370600 | Msa1106810 | 0.821790 | 3.348168e-53 | -8.615850e-47 |
| Msa0370600 | Msa1112610 | 0.832483 | 9.214954e-56 | -8.615850e-47 |
| Msa0370600 | Msa1113850 | 0.828078 | 1.097671e-54 | -8.615850e-47 |
| Msa0370600 | Msa1116930 | 0.808654 | 2.785385e-50 | -8.615850e-47 |
| Msa0370600 | Msa1123880 | 0.840439 | 8.691467e-58 | -8.615850e-47 |
| Msa0370600 | Msa1127140 | 0.885293 | 9.209372e-72 | -8.615850e-47 |
| Msa0370600 | Msa1129960 | 0.831623 | 1.502810e-55 | -8.615850e-47 |
| Msa0370600 | Msa1129970 | 0.815196 | 1.046286e-51 | -8.615850e-47 |
| Msa0370600 | Msa1129980 | 0.823600 | 1.269243e-53 | -8.615850e-47 |
| Msa0370600 | Msa1130010 | 0.803858 | 2.851832e-49 | -8.615850e-47 |
| Msa0370600 | Msa1130690 | 0.817176 | 3.777447e-52 | -8.615850e-47 |
| Msa0370600 | Msa1131020 | 0.807439 | 5.051859e-50 | -8.615850e-47 |
| Msa0370600 | Msa1134400 | 0.843447 | 1.393136e-58 | -8.615850e-47 |
| Msa0370600 | Msa1135870 | 0.830766 | 2.441482e-55 | -8.615850e-47 |
| Msa0370600 | Msa1136230 | 0.822568 | 2.210129e-53 | -8.615850e-47 |
| Msa0370600 | Msa1145020 | 0.822206 | 2.682085e-53 | -8.615850e-47 |
| Msa0370600 | Msa1149760 | 0.832347 | 9.957811e-56 | -8.615850e-47 |
| Msa0370600 | Msa1150970 | 0.807627 | 4.607643e-50 | -8.615850e-47 |
| Msa0370600 | Msa1159100 | 0.820948 | 5.236968e-53 | -8.615850e-47 |
| Msa0370600 | Msa1160400 | 0.821489 | 3.930058e-53 | -8.615850e-47 |
| Msa0370600 | Msa1166400 | 0.870110 | 1.868425e-66 | -8.615850e-47 |
| Msa0370600 | Msa1169990 | 0.838478 | 2.808632e-57 | -8.615850e-47 |
| Msa0370600 | Msa1175750 | 0.814533 | 1.467704e-51 | -8.615850e-47 |
| Msa0370600 | Msa1176160 | 0.824959 | 6.083699e-54 | -8.615850e-47 |
| Msa0370600 | Msa1178160 | 0.803792 | 2.943051e-49 | -8.615850e-47 |
| Msa0370600 | Msa1183390 | 0.817373 | 3.410118e-52 | -8.615850e-47 |
| Msa0370600 | Msa1197110 | 0.812194 | 4.792991e-51 | -8.615850e-47 |
| Msa0370600 | Msa1200920 | 0.832384 | 9.750964e-56 | -8.615850e-47 |
| Msa0370600 | Msa1201110 | 0.818655 | 1.750060e-52 | -8.615850e-47 |
| Msa0370600 | Msa1201160 | 0.825180 | 5.395735e-54 | -8.615850e-47 |
| Msa0370600 | Msa1211090 | 0.820109 | 8.160955e-53 | -8.615850e-47 |
| Msa0370600 | Msa1221260 | 0.813640 | 2.310796e-51 | -8.615850e-47 |
| Msa0370600 | Msa1223840 | 0.802972 | 4.353396e-49 | -8.615850e-47 |
| Msa0370600 | Msa1224670 | 0.818962 | 1.490812e-52 | -8.615850e-47 |
| Msa0370600 | Msa1228610 | 0.804031 | 2.625913e-49 | -8.615850e-47 |
| Msa0370600 | Msa1229700 | 0.808595 | 2.867595e-50 | -8.615850e-47 |
| Msa0370600 | Msa1232860 | 0.805873 | 1.081504e-49 | -8.615850e-47 |
| Msa0370600 | Msa1237030 | 0.802212 | 6.245162e-49 | -8.615850e-47 |
| Msa0370600 | Msa1238480 | 0.812123 | 4.965707e-51 | -8.615850e-47 |
| Msa0370600 | Msa1249870 | 0.813337 | 2.693724e-51 | -8.615850e-47 |
| Msa0370600 | Msa1250670 | 0.801975 | 6.987777e-49 | -8.615850e-47 |
| Msa0370600 | Msa1254190 | 0.825388 | 4.817919e-54 | -8.615850e-47 |
| Msa0370600 | Msa1254770 | 0.803129 | 4.039482e-49 | -8.615850e-47 |
| Msa0370600 | Msa1254800 | 0.803162 | 3.975980e-49 | -8.615850e-47 |
| Msa0370600 | Msa1258810 | 0.824741 | 6.846831e-54 | -8.615850e-47 |
| Msa0370600 | Msa1263030 | 0.805108 | 1.565126e-49 | -8.615850e-47 |
| Msa0370600 | Msa1269580 | -0.801497 | 8.757952e-49 | -8.615850e-47 |
| Msa0370600 | Msa1271510 | 0.815116 | 1.089935e-51 | -8.615850e-47 |
| Msa0370600 | Msa1272330 | 0.864929 | 8.533154e-65 | -8.615850e-47 |
| Msa0370600 | Msa1281720 | 0.832883 | 7.329971e-56 | -8.615850e-47 |
| Msa0370600 | Msa1294290 | 0.802390 | 5.738193e-49 | -8.615850e-47 |
| Msa0370600 | Msa1302150 | 0.825634 | 4.212719e-54 | -8.615850e-47 |
| Msa0370600 | Msa1305510 | 0.804619 | 1.980570e-49 | -8.615850e-47 |
| Msa0370600 | Msa1305750 | 0.812303 | 4.537433e-51 | -8.615850e-47 |
| Msa0370600 | Msa1307190 | 0.812591 | 3.924929e-51 | -8.615850e-47 |
| Msa0370600 | Msa1307370 | 0.809898 | 1.506758e-50 | -8.615850e-47 |
| Msa0370600 | Msa1308950 | 0.807726 | 4.391473e-50 | -8.615850e-47 |
| Msa0370600 | Msa1310290 | 0.803519 | 3.353662e-49 | -8.615850e-47 |
| Msa0370600 | Msa1315980 | 0.809190 | 2.138692e-50 | -8.615850e-47 |
| Msa0370600 | Msa1321000 | 0.834334 | 3.183410e-56 | -8.615850e-47 |
| Msa0370600 | Msa1337090 | 0.806082 | 9.774380e-50 | -8.615850e-47 |
| Msa0370600 | Msa1350670 | 0.823129 | 1.635783e-53 | -8.615850e-47 |
| Msa0370600 | Msa1354040 | 0.828227 | 1.010506e-54 | -8.615850e-47 |
| Msa0370600 | Msa1355400 | 0.991736 | 2.950270e-189 | -8.615850e-47 |
| Msa0370600 | Msa1362510 | 0.810956 | 8.908268e-51 | -8.615850e-47 |
| Msa0370600 | Msa1365020 | 0.850193 | 1.989085e-60 | -8.615850e-47 |
| Msa0370600 | Msa1365200 | 0.822550 | 2.230573e-53 | -8.615850e-47 |
| Msa0370600 | Msa1367410 | 0.843236 | 1.586229e-58 | -8.615850e-47 |
| Msa0370600 | Msa1367940 | 0.800900 | 1.160000e-48 | -8.615850e-47 |
| Msa0370600 | Msa1379980 | 0.808103 | 3.649774e-50 | -8.615850e-47 |
| Msa0370600 | Msa1379990 | 0.825996 | 3.455913e-54 | -8.615850e-47 |
| Msa0370600 | Msa1382310 | 0.805693 | 1.179919e-49 | -8.615850e-47 |
| Msa0370600 | Msa1382720 | 0.805726 | 1.161493e-49 | -8.615850e-47 |
| Msa0370600 | Msa1385620 | 0.801275 | 9.722953e-49 | -8.615850e-47 |
| Msa0370600 | Msa1389470 | 0.821690 | 3.531624e-53 | -8.615850e-47 |
| Msa0370600 | Msa1390310 | 0.832559 | 8.823929e-56 | -8.615850e-47 |
| Msa0370600 | Msa1391370 | 0.820017 | 8.566852e-53 | -8.615850e-47 |
| Msa0370600 | Msa1391590 | 0.812907 | 3.347692e-51 | -8.615850e-47 |
| Msa0370600 | Msa1398480 | 0.811164 | 8.029746e-51 | -8.615850e-47 |
| Msa0370600 | Msa1414930 | 0.805522 | 1.281665e-49 | -8.615850e-47 |
| Msa0370600 | Msa1417650 | 0.817560 | 3.095236e-52 | -8.615850e-47 |
| Msa0370600 | Msa1420060 | 0.886275 | 3.939732e-72 | -8.615850e-47 |
| Msa0370600 | Msa1421550 | 0.841210 | 5.456470e-58 | -8.615850e-47 |
| Msa0370600 | Msa1425060 | 0.804393 | 2.206828e-49 | -8.615850e-47 |
| Msa0370600 | Msa1428290 | 0.814220 | 1.721588e-51 | -8.615850e-47 |
| Msa0370600 | Msa1429830 | 0.807896 | 4.039819e-50 | -8.615850e-47 |
| Msa0370600 | Msa1434020 | 0.808971 | 2.382187e-50 | -8.615850e-47 |
| Msa0370600 | Msa1435040 | 0.836613 | 8.445395e-57 | -8.615850e-47 |
| Msa0370600 | Msa1435050 | 0.833437 | 5.335107e-56 | -8.615850e-47 |
| Msa0370600 | Msa1435670 | 0.830055 | 3.641774e-55 | -8.615850e-47 |
| Msa0370600 | Msa1439120 | 0.801734 | 7.829297e-49 | -8.615850e-47 |
| Msa0370600 | Msa1439670 | 0.845017 | 5.279205e-59 | -8.615850e-47 |
| Msa0370600 | Msa1439680 | 0.801528 | 8.627723e-49 | -8.615850e-47 |
| Msa0370600 | Msa1440220 | 0.804224 | 2.393515e-49 | -8.615850e-47 |
| Msa0370600 | Msa1442290 | 0.806162 | 9.403631e-50 | -8.615850e-47 |
| Msa0370600 | Msa1444450 | 0.818721 | 1.690770e-52 | -8.615850e-47 |
| Msa0370600 | Msa1447230 | 0.824677 | 7.090846e-54 | -8.615850e-47 |
| Msa0370600 | Msa1448720 | 0.816086 | 6.627562e-52 | -8.615850e-47 |
| Msa0370600 | Msa1455660 | 0.800393 | 1.472023e-48 | -8.615850e-47 |
| Msa0370600 | Msa1462510 | 0.821278 | 4.396531e-53 | -8.615850e-47 |
| Msa0239660 | Msa0370600 | 0.826703 | 2.345005e-54 | -8.615850e-47 |
| Msa0260970 | Msa0370600 | 0.829282 | 5.615777e-55 | -8.615850e-47 |
| Msa0267760 | Msa0370600 | 0.834197 | 3.445543e-56 | -8.615850e-47 |
| Msa0274780 | Msa0370600 | 0.811593 | 6.477239e-51 | -8.615850e-47 |
| Msa0277530 | Msa0370600 | 0.813994 | 1.930460e-51 | -8.615850e-47 |
| Msa0277640 | Msa0370600 | 0.816103 | 6.572662e-52 | -8.615850e-47 |
| Msa0290950 | Msa0370600 | 0.801123 | 1.044681e-48 | -8.615850e-47 |
| Msa0297920 | Msa0370600 | 0.833080 | 6.547368e-56 | -8.615850e-47 |
| Msa0298240 | Msa0370600 | 0.849870 | 2.449290e-60 | -8.615850e-47 |
| Msa0315480 | Msa0370600 | 0.831492 | 1.618917e-55 | -8.615850e-47 |
| Msa0322830 | Msa0370600 | 0.804985 | 1.660516e-49 | -8.615850e-47 |
| Msa0331780 | Msa0370600 | 0.803120 | 4.056591e-49 | -8.615850e-47 |
| Msa0336090 | Msa0370600 | 0.821191 | 4.603762e-53 | -8.615850e-47 |
| Msa0337850 | Msa0370600 | 0.826474 | 2.659601e-54 | -8.615850e-47 |
| Msa0351510 | Msa0370600 | 0.820383 | 7.062532e-53 | -8.615850e-47 |
| Msa0359250 | Msa0370600 | 0.804954 | 1.685633e-49 | -8.615850e-47 |
| Msa0361250 | Msa0370600 | 0.815755 | 7.856333e-52 | -8.615850e-47 |
| Msa0361260 | Msa0370600 | 0.863366 | 2.621031e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370600 | MtrunA17_Chr3g0115791 | 96.914 | 162 | 5 | 0 | 59 | 220 | 1 | 162 | 2.10e-116 | 328 |
| Msa0370600 | MtrunA17_Chr5g0425991 | 53.540 | 226 | 82 | 10 | 1 | 217 | 1 | 212 | 3.01e-58 | 183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370600 | AT1G78170.1 | 34.804 | 204 | 111 | 8 | 18 | 211 | 21 | 212 | 2.05e-19 | 83.6 |
| Msa0370600 | AT1G22250.1 | 40.870 | 115 | 55 | 4 | 101 | 208 | 80 | 188 | 4.94e-16 | 73.9 |
| Msa0370600 | AT4G08910.1 | 40.000 | 120 | 45 | 3 | 102 | 203 | 86 | 196 | 1.19e-15 | 73.2 |
Find 60 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGTTTCCTTCAAATAAT+TGG | 0.175659 | 3_1:-68501727 | Msa0370600:CDS |
| TTGAAGAATTCTTCAGTAAA+TGG | 0.216211 | 3_1:+68501809 | None:intergenic |
| GTGTCAATACCTTGGTATTC+AGG | 0.222403 | 3_1:-68501705 | Msa0370600:intron |
| TCTTCTTTAACTTCAGTTCT+TGG | 0.222864 | 3_1:+68501866 | None:intergenic |
| GAAAACTTCATCTATTTAAC+AGG | 0.250373 | 3_1:+68501033 | None:intergenic |
| CATCTATTTAACAGGGAATA+AGG | 0.258672 | 3_1:+68501041 | None:intergenic |
| TCTTGGTTAGTTTCAAATCT+TGG | 0.327382 | 3_1:+68500931 | None:intergenic |
| CATGGACAGTGCTTTGAATA+AGG | 0.336246 | 3_1:+68501892 | None:intergenic |
| CAGCTTCTTCTGCTCTAGTT+AGG | 0.340324 | 3_1:-68501165 | Msa0370600:exon |
| AGCAAGTTTAAGAAAGATTC+GGG | 0.373167 | 3_1:-68501371 | Msa0370600:CDS |
| AAGCAAGTTTAAGAAAGATT+CGG | 0.375998 | 3_1:-68501372 | Msa0370600:CDS |
| CATCTCTTTGTAATCTCCTT+CGG | 0.379098 | 3_1:+68501313 | None:intergenic |
| TTGTGTGTGTGTTTATTTGT+TGG | 0.395128 | 3_1:+68501947 | None:intergenic |
| ATCATGTTCTGTCAAACTCT+TGG | 0.401354 | 3_1:+68501412 | None:intergenic |
| AAAGATTCGGGTGGTTTAAA+CGG | 0.409779 | 3_1:-68501359 | Msa0370600:CDS |
| GTTTCTATCGTTGTCCGATC+GGG | 0.412127 | 3_1:+68501560 | None:intergenic |
| ATTTACTGAAGAATTCTTCA+AGG | 0.415230 | 3_1:-68501807 | Msa0370600:CDS |
| ATCAAACAAATTTAGAGAAA+AGG | 0.427149 | 3_1:-68501784 | Msa0370600:CDS |
| TGAAGGAAACATGGTCTCTA+GGG | 0.443563 | 3_1:+68501736 | None:intergenic |
| GGTTTCTATCGTTGTCCGAT+CGG | 0.443816 | 3_1:+68501559 | None:intergenic |
| ATCAAATGTAGCACAATACT+TGG | 0.447114 | 3_1:+68501972 | None:intergenic |
| GATACCATGGCTTGAACAAA+TGG | 0.448953 | 3_1:+68501914 | None:intergenic |
| TATTGACACCAATTATTTGA+AGG | 0.449231 | 3_1:+68501719 | None:intergenic |
| TTGTCGCAGGCTTCGTTTCG+AGG | 0.449883 | 3_1:+68501538 | None:intergenic |
| TCATGTTCTGTCAAACTCTT+GGG | 0.450709 | 3_1:+68501413 | None:intergenic |
| TTGAAGGAAACATGGTCTCT+AGG | 0.459950 | 3_1:+68501735 | None:intergenic |
| AGTGATCAGAAGAAGAATTC+TGG | 0.461088 | 3_1:-68501443 | Msa0370600:CDS |
| TTTCAGCTTTATATACATCA+TGG | 0.469520 | 3_1:-68501102 | Msa0370600:three_prime_UTR |
| GTATCTGCATTCTGCACTGC+AGG | 0.484235 | 3_1:+68501140 | None:intergenic |
| AACTTCAGTTCTTGGAGTCA+TGG | 0.494815 | 3_1:+68501874 | None:intergenic |
| ATCAAAGAAAAGAAAGTTTG+AGG | 0.498556 | 3_1:-68501834 | Msa0370600:CDS |
| GAGTGCATGAATTTGCAGTT+AGG | 0.515352 | 3_1:+68501227 | None:intergenic |
| AATAATTGGTGTCAATACCT+TGG | 0.524933 | 3_1:-68501713 | Msa0370600:CDS |
| GTTTAAACGGTTCTCAGTCG+TGG | 0.546535 | 3_1:-68501346 | Msa0370600:CDS |
| TAGGGGAGGCTTTGTATCAA+AGG | 0.546793 | 3_1:+68501754 | None:intergenic |
| CTAGATAGATAACATAGGAT+TGG | 0.557065 | 3_1:+68501073 | None:intergenic |
| AATTTGCAGTTAGGACAAGC+AGG | 0.557243 | 3_1:+68501236 | None:intergenic |
| TCCACCATTTGTTCAAGCCA+TGG | 0.557541 | 3_1:-68501918 | Msa0370600:exon |
| CCAATTATTTGAAGGAAACA+TGG | 0.558834 | 3_1:+68501727 | None:intergenic |
| CTTGAACAAATGGTGGATAG+TGG | 0.567224 | 3_1:+68501924 | None:intergenic |
| CGAAGGAGATTACAAAGAGA+TGG | 0.571998 | 3_1:-68501312 | Msa0370600:CDS |
| GCTTTATATACATCATGGCA+TGG | 0.572428 | 3_1:-68501097 | Msa0370600:three_prime_UTR |
| CACATGTCAAGTTTAGCTCA+AGG | 0.577317 | 3_1:+68501489 | None:intergenic |
| TGCTTTGAATAAGGATACCA+TGG | 0.582273 | 3_1:+68501901 | None:intergenic |
| AAGCTCATGTGATCAGAAGA+AGG | 0.583375 | 3_1:+68501515 | None:intergenic |
| GGGAGGCTTTGTATCAAAGG+TGG | 0.591243 | 3_1:+68501757 | None:intergenic |
| AAGAACTAGATAGATAACAT+AGG | 0.595365 | 3_1:+68501068 | None:intergenic |
| GATCAGAAGAAGGTTGTCGC+AGG | 0.608082 | 3_1:+68501525 | None:intergenic |
| ACCATGGCTTGAACAAATGG+TGG | 0.609652 | 3_1:+68501917 | None:intergenic |
| TCGTGGTTGTCGACAACCGA+AGG | 0.619983 | 3_1:-68501329 | Msa0370600:CDS |
| AAAACTTCATCTATTTAACA+GGG | 0.632853 | 3_1:+68501034 | None:intergenic |
| TGTGTAACACAAGACCCGAT+CGG | 0.652579 | 3_1:-68501574 | Msa0370600:CDS |
| ACTTGACATGTGAATCACAA+AGG | 0.656443 | 3_1:-68501478 | Msa0370600:CDS |
| GGAAACATGGTCTCTAGGGG+AGG | 0.657415 | 3_1:+68501740 | None:intergenic |
| TTGCATGCAGTGTCACATGT+TGG | 0.659365 | 3_1:-68501279 | Msa0370600:CDS |
| TCAAATGTAGCACAATACTT+GGG | 0.662721 | 3_1:+68501973 | None:intergenic |
| GAAGGAAACATGGTCTCTAG+GGG | 0.665977 | 3_1:+68501737 | None:intergenic |
| AATATTCTGCTCTGTCAACG+TGG | 0.677868 | 3_1:+68500965 | None:intergenic |
| AAGTTTAAGAAAGATTCGGG+TGG | 0.705138 | 3_1:-68501368 | Msa0370600:CDS |
| CAACATATACCTGAATACCA+AGG | 0.712025 | 3_1:+68501696 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAGTAACAATTAATATTTTA+AGG | + | chr3_1:68501976-68501995 | None:intergenic | 15.0% |
| !!! | GAGTAACAATTAATATTTTA+AGG | + | chr3_1:68501976-68501995 | None:intergenic | 15.0% |
| !! | ATCAAACAAATTTAGAGAAA+AGG | - | chr3_1:68501084-68501103 | Msa0370600:three_prime_UTR | 20.0% |
| !! | TAAAGATTGATCATAAGATA+TGG | + | chr3_1:68501242-68501261 | None:intergenic | 20.0% |
| !! | AAAACTTCATCTATTTAACA+GGG | + | chr3_1:68501837-68501856 | None:intergenic | 20.0% |
| !! | ATCAAACAAATTTAGAGAAA+AGG | - | chr3_1:68501084-68501103 | Msa0370600:three_prime_UTR | 20.0% |
| !! | TAAAGATTGATCATAAGATA+TGG | + | chr3_1:68501242-68501261 | None:intergenic | 20.0% |
| !! | AAAACTTCATCTATTTAACA+GGG | + | chr3_1:68501837-68501856 | None:intergenic | 20.0% |
| ! | ATCAAAGAAAAGAAAGTTTG+AGG | - | chr3_1:68501034-68501053 | Msa0370600:three_prime_UTR | 25.0% |
| ! | TTGAAGAATTCTTCAGTAAA+TGG | + | chr3_1:68501062-68501081 | None:intergenic | 25.0% |
| ! | ATTTACTGAAGAATTCTTCA+AGG | - | chr3_1:68501061-68501080 | Msa0370600:three_prime_UTR | 25.0% |
| ! | TATTGACACCAATTATTTGA+AGG | + | chr3_1:68501152-68501171 | None:intergenic | 25.0% |
| ! | ATCATAAGATATGGTATCAT+TGG | + | chr3_1:68501233-68501252 | None:intergenic | 25.0% |
| !!! | TAATTTTTTTATGTGCAGTC+AGG | - | chr3_1:68501260-68501279 | Msa0370600:CDS | 25.0% |
| !!! | AATTTTTTTATGTGCAGTCA+GGG | - | chr3_1:68501261-68501280 | Msa0370600:CDS | 25.0% |
| ! | AAGCAAGTTTAAGAAAGATT+CGG | - | chr3_1:68501496-68501515 | Msa0370600:CDS | 25.0% |
| !! | TTTCAGCTTTATATACATCA+TGG | - | chr3_1:68501766-68501785 | Msa0370600:CDS | 25.0% |
| ! | AAGAACTAGATAGATAACAT+AGG | + | chr3_1:68501803-68501822 | None:intergenic | 25.0% |
| ! | GAAAACTTCATCTATTTAAC+AGG | + | chr3_1:68501838-68501857 | None:intergenic | 25.0% |
| ! | AAGGATTAACAAAAATGTCT+TGG | + | chr3_1:68501957-68501976 | None:intergenic | 25.0% |
| ! | ATCAAAGAAAAGAAAGTTTG+AGG | - | chr3_1:68501034-68501053 | Msa0370600:three_prime_UTR | 25.0% |
| ! | TTGAAGAATTCTTCAGTAAA+TGG | + | chr3_1:68501062-68501081 | None:intergenic | 25.0% |
| ! | ATTTACTGAAGAATTCTTCA+AGG | - | chr3_1:68501061-68501080 | Msa0370600:three_prime_UTR | 25.0% |
| ! | TATTGACACCAATTATTTGA+AGG | + | chr3_1:68501152-68501171 | None:intergenic | 25.0% |
| ! | ATCATAAGATATGGTATCAT+TGG | + | chr3_1:68501233-68501252 | None:intergenic | 25.0% |
| !!! | TAATTTTTTTATGTGCAGTC+AGG | - | chr3_1:68501260-68501279 | Msa0370600:CDS | 25.0% |
| !!! | AATTTTTTTATGTGCAGTCA+GGG | - | chr3_1:68501261-68501280 | Msa0370600:CDS | 25.0% |
| ! | AAGCAAGTTTAAGAAAGATT+CGG | - | chr3_1:68501496-68501515 | Msa0370600:CDS | 25.0% |
| !! | TTTCAGCTTTATATACATCA+TGG | - | chr3_1:68501766-68501785 | Msa0370600:CDS | 25.0% |
| ! | AAGAACTAGATAGATAACAT+AGG | + | chr3_1:68501803-68501822 | None:intergenic | 25.0% |
| ! | GAAAACTTCATCTATTTAAC+AGG | + | chr3_1:68501838-68501857 | None:intergenic | 25.0% |
| ! | AAGGATTAACAAAAATGTCT+TGG | + | chr3_1:68501957-68501976 | None:intergenic | 25.0% |
| TCAAATGTAGCACAATACTT+GGG | + | chr3_1:68500898-68500917 | None:intergenic | 30.0% | |
| ATCAAATGTAGCACAATACT+TGG | + | chr3_1:68500899-68500918 | None:intergenic | 30.0% | |
| TTGTGTGTGTGTTTATTTGT+TGG | + | chr3_1:68500924-68500943 | None:intergenic | 30.0% | |
| ! | TCTTCTTTAACTTCAGTTCT+TGG | + | chr3_1:68501005-68501024 | None:intergenic | 30.0% |
| CCAATTATTTGAAGGAAACA+TGG | + | chr3_1:68501144-68501163 | None:intergenic | 30.0% | |
| CCATGTTTCCTTCAAATAAT+TGG | - | chr3_1:68501141-68501160 | Msa0370600:three_prime_UTR | 30.0% | |
| !! | AATAATTGGTGTCAATACCT+TGG | - | chr3_1:68501155-68501174 | Msa0370600:exon | 30.0% |
| AGCAAGTTTAAGAAAGATTC+GGG | - | chr3_1:68501497-68501516 | Msa0370600:CDS | 30.0% | |
| ! | TGCTCTTCAAGAATTTTGAA+GGG | + | chr3_1:68501679-68501698 | None:intergenic | 30.0% |
| CTAGATAGATAACATAGGAT+TGG | + | chr3_1:68501798-68501817 | None:intergenic | 30.0% | |
| CATCTATTTAACAGGGAATA+AGG | + | chr3_1:68501830-68501849 | None:intergenic | 30.0% | |
| !! | TCTTGGTTAGTTTCAAATCT+TGG | + | chr3_1:68501940-68501959 | None:intergenic | 30.0% |
| TCAAATGTAGCACAATACTT+GGG | + | chr3_1:68500898-68500917 | None:intergenic | 30.0% | |
| ATCAAATGTAGCACAATACT+TGG | + | chr3_1:68500899-68500918 | None:intergenic | 30.0% | |
| TTGTGTGTGTGTTTATTTGT+TGG | + | chr3_1:68500924-68500943 | None:intergenic | 30.0% | |
| ! | TCTTCTTTAACTTCAGTTCT+TGG | + | chr3_1:68501005-68501024 | None:intergenic | 30.0% |
| CCAATTATTTGAAGGAAACA+TGG | + | chr3_1:68501144-68501163 | None:intergenic | 30.0% | |
| CCATGTTTCCTTCAAATAAT+TGG | - | chr3_1:68501141-68501160 | Msa0370600:three_prime_UTR | 30.0% | |
| !! | AATAATTGGTGTCAATACCT+TGG | - | chr3_1:68501155-68501174 | Msa0370600:exon | 30.0% |
| AGCAAGTTTAAGAAAGATTC+GGG | - | chr3_1:68501497-68501516 | Msa0370600:CDS | 30.0% | |
| ! | TGCTCTTCAAGAATTTTGAA+GGG | + | chr3_1:68501679-68501698 | None:intergenic | 30.0% |
| CTAGATAGATAACATAGGAT+TGG | + | chr3_1:68501798-68501817 | None:intergenic | 30.0% | |
| CATCTATTTAACAGGGAATA+AGG | + | chr3_1:68501830-68501849 | None:intergenic | 30.0% | |
| !! | TCTTGGTTAGTTTCAAATCT+TGG | + | chr3_1:68501940-68501959 | None:intergenic | 30.0% |
| ! | TGCTTTGAATAAGGATACCA+TGG | + | chr3_1:68500970-68500989 | None:intergenic | 35.0% |
| CAACATATACCTGAATACCA+AGG | + | chr3_1:68501175-68501194 | None:intergenic | 35.0% | |
| ACTTGACATGTGAATCACAA+AGG | - | chr3_1:68501390-68501409 | Msa0370600:CDS | 35.0% | |
| AGTGATCAGAAGAAGAATTC+TGG | - | chr3_1:68501425-68501444 | Msa0370600:CDS | 35.0% | |
| TCATGTTCTGTCAAACTCTT+GGG | + | chr3_1:68501458-68501477 | None:intergenic | 35.0% | |
| ATCATGTTCTGTCAAACTCT+TGG | + | chr3_1:68501459-68501478 | None:intergenic | 35.0% | |
| AAGTTTAAGAAAGATTCGGG+TGG | - | chr3_1:68501500-68501519 | Msa0370600:CDS | 35.0% | |
| AAAGATTCGGGTGGTTTAAA+CGG | - | chr3_1:68501509-68501528 | Msa0370600:CDS | 35.0% | |
| CATCTCTTTGTAATCTCCTT+CGG | + | chr3_1:68501558-68501577 | None:intergenic | 35.0% | |
| !! | AATTTTGAAGGGTTCTGATC+TGG | + | chr3_1:68501668-68501687 | None:intergenic | 35.0% |
| ! | CTGCTCTTCAAGAATTTTGA+AGG | + | chr3_1:68501680-68501699 | None:intergenic | 35.0% |
| GCTTTATATACATCATGGCA+TGG | - | chr3_1:68501771-68501790 | Msa0370600:CDS | 35.0% | |
| ! | TGCTTTGAATAAGGATACCA+TGG | + | chr3_1:68500970-68500989 | None:intergenic | 35.0% |
| CAACATATACCTGAATACCA+AGG | + | chr3_1:68501175-68501194 | None:intergenic | 35.0% | |
| ACTTGACATGTGAATCACAA+AGG | - | chr3_1:68501390-68501409 | Msa0370600:CDS | 35.0% | |
| AGTGATCAGAAGAAGAATTC+TGG | - | chr3_1:68501425-68501444 | Msa0370600:CDS | 35.0% | |
| TCATGTTCTGTCAAACTCTT+GGG | + | chr3_1:68501458-68501477 | None:intergenic | 35.0% | |
| ATCATGTTCTGTCAAACTCT+TGG | + | chr3_1:68501459-68501478 | None:intergenic | 35.0% | |
| AAGTTTAAGAAAGATTCGGG+TGG | - | chr3_1:68501500-68501519 | Msa0370600:CDS | 35.0% | |
| AAAGATTCGGGTGGTTTAAA+CGG | - | chr3_1:68501509-68501528 | Msa0370600:CDS | 35.0% | |
| CATCTCTTTGTAATCTCCTT+CGG | + | chr3_1:68501558-68501577 | None:intergenic | 35.0% | |
| !! | AATTTTGAAGGGTTCTGATC+TGG | + | chr3_1:68501668-68501687 | None:intergenic | 35.0% |
| ! | CTGCTCTTCAAGAATTTTGA+AGG | + | chr3_1:68501680-68501699 | None:intergenic | 35.0% |
| GCTTTATATACATCATGGCA+TGG | - | chr3_1:68501771-68501790 | Msa0370600:CDS | 35.0% | |
| !! | CTTGAACAAATGGTGGATAG+TGG | + | chr3_1:68500947-68500966 | None:intergenic | 40.0% |
| GATACCATGGCTTGAACAAA+TGG | + | chr3_1:68500957-68500976 | None:intergenic | 40.0% | |
| ! | CATGGACAGTGCTTTGAATA+AGG | + | chr3_1:68500979-68500998 | None:intergenic | 40.0% |
| AACTTCAGTTCTTGGAGTCA+TGG | + | chr3_1:68500997-68501016 | None:intergenic | 40.0% | |
| TGAAGGAAACATGGTCTCTA+GGG | + | chr3_1:68501135-68501154 | None:intergenic | 40.0% | |
| TTGAAGGAAACATGGTCTCT+AGG | + | chr3_1:68501136-68501155 | None:intergenic | 40.0% | |
| GTGTCAATACCTTGGTATTC+AGG | - | chr3_1:68501163-68501182 | Msa0370600:exon | 40.0% | |
| AAGCTCATGTGATCAGAAGA+AGG | + | chr3_1:68501356-68501375 | None:intergenic | 40.0% | |
| ! | CACATGTCAAGTTTAGCTCA+AGG | + | chr3_1:68501382-68501401 | None:intergenic | 40.0% |
| CGAAGGAGATTACAAAGAGA+TGG | - | chr3_1:68501556-68501575 | Msa0370600:CDS | 40.0% | |
| AATTTGCAGTTAGGACAAGC+AGG | + | chr3_1:68501635-68501654 | None:intergenic | 40.0% | |
| GAGTGCATGAATTTGCAGTT+AGG | + | chr3_1:68501644-68501663 | None:intergenic | 40.0% | |
| AATATTCTGCTCTGTCAACG+TGG | + | chr3_1:68501906-68501925 | None:intergenic | 40.0% | |
| !! | CTTGAACAAATGGTGGATAG+TGG | + | chr3_1:68500947-68500966 | None:intergenic | 40.0% |
| GATACCATGGCTTGAACAAA+TGG | + | chr3_1:68500957-68500976 | None:intergenic | 40.0% | |
| ! | CATGGACAGTGCTTTGAATA+AGG | + | chr3_1:68500979-68500998 | None:intergenic | 40.0% |
| AACTTCAGTTCTTGGAGTCA+TGG | + | chr3_1:68500997-68501016 | None:intergenic | 40.0% | |
| TGAAGGAAACATGGTCTCTA+GGG | + | chr3_1:68501135-68501154 | None:intergenic | 40.0% | |
| TTGAAGGAAACATGGTCTCT+AGG | + | chr3_1:68501136-68501155 | None:intergenic | 40.0% | |
| GTGTCAATACCTTGGTATTC+AGG | - | chr3_1:68501163-68501182 | Msa0370600:exon | 40.0% | |
| AAGCTCATGTGATCAGAAGA+AGG | + | chr3_1:68501356-68501375 | None:intergenic | 40.0% | |
| ! | CACATGTCAAGTTTAGCTCA+AGG | + | chr3_1:68501382-68501401 | None:intergenic | 40.0% |
| CGAAGGAGATTACAAAGAGA+TGG | - | chr3_1:68501556-68501575 | Msa0370600:CDS | 40.0% | |
| AATTTGCAGTTAGGACAAGC+AGG | + | chr3_1:68501635-68501654 | None:intergenic | 40.0% | |
| GAGTGCATGAATTTGCAGTT+AGG | + | chr3_1:68501644-68501663 | None:intergenic | 40.0% | |
| AATATTCTGCTCTGTCAACG+TGG | + | chr3_1:68501906-68501925 | None:intergenic | 40.0% | |
| TCCACCATTTGTTCAAGCCA+TGG | - | chr3_1:68500950-68500969 | Msa0370600:three_prime_UTR | 45.0% | |
| ACCATGGCTTGAACAAATGG+TGG | + | chr3_1:68500954-68500973 | None:intergenic | 45.0% | |
| ! | TAGGGGAGGCTTTGTATCAA+AGG | + | chr3_1:68501117-68501136 | None:intergenic | 45.0% |
| GAAGGAAACATGGTCTCTAG+GGG | + | chr3_1:68501134-68501153 | None:intergenic | 45.0% | |
| TGTGTAACACAAGACCCGAT+CGG | - | chr3_1:68501294-68501313 | Msa0370600:CDS | 45.0% | |
| GTTTCTATCGTTGTCCGATC+GGG | + | chr3_1:68501311-68501330 | None:intergenic | 45.0% | |
| GGTTTCTATCGTTGTCCGAT+CGG | + | chr3_1:68501312-68501331 | None:intergenic | 45.0% | |
| GTTTAAACGGTTCTCAGTCG+TGG | - | chr3_1:68501522-68501541 | Msa0370600:CDS | 45.0% | |
| TTGCATGCAGTGTCACATGT+TGG | - | chr3_1:68501589-68501608 | Msa0370600:CDS | 45.0% | |
| CAGCTTCTTCTGCTCTAGTT+AGG | - | chr3_1:68501703-68501722 | Msa0370600:intron | 45.0% | |
| TCCACCATTTGTTCAAGCCA+TGG | - | chr3_1:68500950-68500969 | Msa0370600:three_prime_UTR | 45.0% | |
| ACCATGGCTTGAACAAATGG+TGG | + | chr3_1:68500954-68500973 | None:intergenic | 45.0% | |
| ! | TAGGGGAGGCTTTGTATCAA+AGG | + | chr3_1:68501117-68501136 | None:intergenic | 45.0% |
| GAAGGAAACATGGTCTCTAG+GGG | + | chr3_1:68501134-68501153 | None:intergenic | 45.0% | |
| TGTGTAACACAAGACCCGAT+CGG | - | chr3_1:68501294-68501313 | Msa0370600:CDS | 45.0% | |
| GTTTCTATCGTTGTCCGATC+GGG | + | chr3_1:68501311-68501330 | None:intergenic | 45.0% | |
| GGTTTCTATCGTTGTCCGAT+CGG | + | chr3_1:68501312-68501331 | None:intergenic | 45.0% | |
| GTTTAAACGGTTCTCAGTCG+TGG | - | chr3_1:68501522-68501541 | Msa0370600:CDS | 45.0% | |
| TTGCATGCAGTGTCACATGT+TGG | - | chr3_1:68501589-68501608 | Msa0370600:CDS | 45.0% | |
| CAGCTTCTTCTGCTCTAGTT+AGG | - | chr3_1:68501703-68501722 | Msa0370600:intron | 45.0% | |
| ! | GGGAGGCTTTGTATCAAAGG+TGG | + | chr3_1:68501114-68501133 | None:intergenic | 50.0% |
| GATCAGAAGAAGGTTGTCGC+AGG | + | chr3_1:68501346-68501365 | None:intergenic | 50.0% | |
| GTATCTGCATTCTGCACTGC+AGG | + | chr3_1:68501731-68501750 | None:intergenic | 50.0% | |
| ! | GGGAGGCTTTGTATCAAAGG+TGG | + | chr3_1:68501114-68501133 | None:intergenic | 50.0% |
| GATCAGAAGAAGGTTGTCGC+AGG | + | chr3_1:68501346-68501365 | None:intergenic | 50.0% | |
| GTATCTGCATTCTGCACTGC+AGG | + | chr3_1:68501731-68501750 | None:intergenic | 50.0% | |
| ! | GGAAACATGGTCTCTAGGGG+AGG | + | chr3_1:68501131-68501150 | None:intergenic | 55.0% |
| TTGTCGCAGGCTTCGTTTCG+AGG | + | chr3_1:68501333-68501352 | None:intergenic | 55.0% | |
| TCGTGGTTGTCGACAACCGA+AGG | - | chr3_1:68501539-68501558 | Msa0370600:CDS | 55.0% | |
| ! | GGAAACATGGTCTCTAGGGG+AGG | + | chr3_1:68501131-68501150 | None:intergenic | 55.0% |
| TTGTCGCAGGCTTCGTTTCG+AGG | + | chr3_1:68501333-68501352 | None:intergenic | 55.0% | |
| TCGTGGTTGTCGACAACCGA+AGG | - | chr3_1:68501539-68501558 | Msa0370600:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 68500888 | 68502002 | 68500888 | ID=Msa0370600;Name=Msa0370600 |
| chr3_1 | mRNA | 68500888 | 68502002 | 68500888 | ID=Msa0370600-mRNA-1;Parent=Msa0370600;Name=Msa0370600-mRNA-1;_AED=0.04;_eAED=0.04;_QI=81|1|1|1|1|1|2|278|220 |
| chr3_1 | exon | 68500888 | 68501612 | 68500888 | ID=Msa0370600-mRNA-1:exon:14416;Parent=Msa0370600-mRNA-1 |
| chr3_1 | exon | 68501706 | 68502002 | 68501706 | ID=Msa0370600-mRNA-1:exon:14415;Parent=Msa0370600-mRNA-1 |
| chr3_1 | five_prime_UTR | 68501922 | 68502002 | 68501922 | ID=Msa0370600-mRNA-1:five_prime_utr;Parent=Msa0370600-mRNA-1 |
| chr3_1 | CDS | 68501706 | 68501921 | 68501706 | ID=Msa0370600-mRNA-1:cds;Parent=Msa0370600-mRNA-1 |
| chr3_1 | CDS | 68501166 | 68501612 | 68501166 | ID=Msa0370600-mRNA-1:cds;Parent=Msa0370600-mRNA-1 |
| chr3_1 | three_prime_UTR | 68500888 | 68501165 | 68500888 | ID=Msa0370600-mRNA-1:three_prime_utr;Parent=Msa0370600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
