Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0651130 | XP_024636446.2 | 94.500 | 400 | 20 | 1 | 1 | 398 | 1 | 400 | 0.0 | 757 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0651130 | sp|P48979|PGLR_PRUPE | 66.332 | 398 | 129 | 2 | 1 | 398 | 1 | 393 | 0.0 | 542 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0651130 | A0A396I8Y1 | 94.500 | 400 | 20 | 1 | 1 | 398 | 1 | 400 | 0.0 | 757 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0087550 | Msa0651130 | 0.800797 | 1.217366e-48 | -8.615850e-47 |
Msa0610480 | Msa0651130 | 0.919330 | 5.152010e-87 | -8.615850e-47 |
Msa0642920 | Msa0651130 | 0.804830 | 1.789511e-49 | -8.615850e-47 |
Msa0651130 | Msa0662210 | 0.872721 | 2.558089e-67 | -8.615850e-47 |
Msa0651130 | Msa0693140 | 0.886681 | 2.768534e-72 | -8.615850e-47 |
Msa0414050 | Msa0651130 | 0.830802 | 2.391964e-55 | -8.615850e-47 |
Msa0459150 | Msa0651130 | 0.820628 | 6.203449e-53 | -8.615850e-47 |
Msa0500910 | Msa0651130 | 0.803213 | 3.880027e-49 | -8.615850e-47 |
Msa0505640 | Msa0651130 | 0.803654 | 3.144877e-49 | -8.615850e-47 |
Msa0547060 | Msa0651130 | 0.811116 | 8.224471e-51 | -8.615850e-47 |
Msa0580080 | Msa0651130 | 0.879902 | 8.525743e-70 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0651130 | MtrunA17_Chr4g0043431 | 94.500 | 400 | 20 | 1 | 1 | 398 | 1 | 400 | 0.0 | 757 |
Msa0651130 | MtrunA17_Chr2g0291841 | 67.062 | 337 | 106 | 3 | 65 | 398 | 28 | 362 | 4.76e-165 | 467 |
Msa0651130 | MtrunA17_Chr7g0230891 | 53.728 | 389 | 174 | 3 | 14 | 398 | 14 | 400 | 3.33e-152 | 436 |
Msa0651130 | MtrunA17_Chr2g0303941 | 52.551 | 392 | 181 | 5 | 8 | 398 | 4 | 391 | 6.07e-138 | 399 |
Msa0651130 | MtrunA17_Chr1g0195221 | 41.470 | 381 | 209 | 9 | 28 | 398 | 30 | 406 | 3.35e-91 | 280 |
Msa0651130 | MtrunA17_Chr8g0337351 | 73.653 | 167 | 44 | 0 | 165 | 331 | 1 | 167 | 5.47e-87 | 261 |
Msa0651130 | MtrunA17_Chr1g0173451 | 42.819 | 376 | 204 | 8 | 25 | 397 | 68 | 435 | 7.36e-87 | 271 |
Msa0651130 | MtrunA17_Chr8g0348981 | 38.847 | 399 | 229 | 9 | 10 | 398 | 5 | 398 | 8.50e-85 | 263 |
Msa0651130 | MtrunA17_Chr2g0332801 | 41.398 | 372 | 209 | 8 | 34 | 398 | 60 | 429 | 3.76e-84 | 263 |
Msa0651130 | MtrunA17_Chr2g0307831 | 38.046 | 389 | 218 | 7 | 8 | 383 | 1 | 379 | 6.57e-83 | 259 |
Msa0651130 | MtrunA17_Chr2g0307821 | 38.046 | 389 | 218 | 7 | 8 | 383 | 1 | 379 | 6.57e-83 | 259 |
Msa0651130 | MtrunA17_Chr8g0365901 | 40.584 | 377 | 204 | 11 | 34 | 398 | 66 | 434 | 1.06e-82 | 260 |
Msa0651130 | MtrunA17_Chr4g0067631 | 37.736 | 371 | 222 | 6 | 34 | 397 | 53 | 421 | 3.95e-82 | 258 |
Msa0651130 | MtrunA17_Chr6g0449961 | 40.318 | 377 | 212 | 10 | 27 | 398 | 39 | 407 | 3.13e-80 | 253 |
Msa0651130 | MtrunA17_Chr2g0307811 | 38.243 | 387 | 220 | 8 | 8 | 383 | 1 | 379 | 7.94e-80 | 251 |
Msa0651130 | MtrunA17_Chr5g0418411 | 36.725 | 403 | 240 | 9 | 4 | 398 | 1 | 396 | 3.89e-77 | 244 |
Msa0651130 | MtrunA17_Chr6g0461181 | 33.254 | 418 | 226 | 9 | 27 | 398 | 24 | 434 | 9.61e-75 | 239 |
Msa0651130 | MtrunA17_Chr3g0121891 | 37.634 | 372 | 216 | 7 | 8 | 371 | 4 | 367 | 7.85e-74 | 235 |
Msa0651130 | MtrunA17_Chr4g0020771 | 40.116 | 344 | 193 | 9 | 35 | 370 | 76 | 414 | 1.03e-73 | 236 |
Msa0651130 | MtrunA17_Chr3g0089021 | 41.576 | 368 | 194 | 10 | 23 | 374 | 51 | 413 | 1.79e-73 | 236 |
Msa0651130 | MtrunA17_Chr4g0043661 | 35.484 | 403 | 228 | 13 | 11 | 398 | 9 | 394 | 7.71e-71 | 228 |
Msa0651130 | MtrunA17_Chr3g0121881 | 35.190 | 395 | 241 | 10 | 1 | 387 | 1 | 388 | 2.95e-70 | 226 |
Msa0651130 | MtrunA17_Chr8g0365891 | 34.815 | 405 | 226 | 9 | 29 | 398 | 103 | 504 | 3.38e-69 | 227 |
Msa0651130 | MtrunA17_Chr1g0194231 | 36.761 | 389 | 225 | 12 | 28 | 398 | 76 | 461 | 4.83e-69 | 225 |
Msa0651130 | MtrunA17_Chr5g0413411 | 35.732 | 403 | 222 | 9 | 30 | 398 | 118 | 517 | 5.32e-69 | 226 |
Msa0651130 | MtrunA17_Chr2g0295451 | 39.597 | 298 | 173 | 4 | 25 | 316 | 45 | 341 | 3.52e-68 | 220 |
Msa0651130 | MtrunA17_Chr2g0332971 | 37.065 | 402 | 233 | 10 | 10 | 398 | 8 | 402 | 5.98e-68 | 220 |
Msa0651130 | MtrunA17_Chr7g0270361 | 36.951 | 387 | 224 | 12 | 29 | 398 | 63 | 446 | 8.64e-68 | 221 |
Msa0651130 | MtrunA17_Chr4g0052621 | 37.371 | 388 | 222 | 14 | 28 | 398 | 60 | 443 | 2.27e-67 | 220 |
Msa0651130 | MtrunA17_Chr1g0150291 | 34.321 | 405 | 247 | 12 | 2 | 398 | 17 | 410 | 9.97e-67 | 217 |
Msa0651130 | MtrunA17_Chr1g0150301 | 34.837 | 399 | 242 | 11 | 4 | 395 | 1 | 388 | 2.48e-66 | 216 |
Msa0651130 | MtrunA17_Chr4g0018151 | 36.683 | 398 | 232 | 10 | 10 | 398 | 54 | 440 | 1.31e-64 | 213 |
Msa0651130 | MtrunA17_Chr5g0413141 | 33.947 | 380 | 230 | 12 | 32 | 396 | 58 | 431 | 8.54e-64 | 211 |
Msa0651130 | MtrunA17_Chr8g0337581 | 34.653 | 404 | 240 | 12 | 4 | 398 | 1 | 389 | 5.09e-63 | 207 |
Msa0651130 | MtrunA17_Chr5g0447901 | 37.855 | 317 | 184 | 9 | 28 | 337 | 20 | 330 | 1.03e-62 | 204 |
Msa0651130 | MtrunA17_Chr7g0228411 | 33.250 | 400 | 223 | 12 | 7 | 370 | 9 | 400 | 1.30e-62 | 207 |
Msa0651130 | MtrunA17_Chr8g0337571 | 35.097 | 359 | 213 | 8 | 4 | 356 | 1 | 345 | 3.44e-62 | 205 |
Msa0651130 | MtrunA17_Chr3g0093011 | 40.234 | 256 | 147 | 4 | 148 | 398 | 7 | 261 | 1.85e-57 | 188 |
Msa0651130 | MtrunA17_Chr7g0257721 | 42.969 | 256 | 141 | 4 | 34 | 285 | 77 | 331 | 1.36e-56 | 189 |
Msa0651130 | MtrunA17_Chr7g0257701 | 40.248 | 323 | 148 | 9 | 33 | 317 | 65 | 380 | 2.11e-56 | 190 |
Msa0651130 | MtrunA17_Chr5g0425811 | 39.568 | 278 | 157 | 6 | 50 | 323 | 2 | 272 | 6.19e-55 | 182 |
Msa0651130 | MtrunA17_Chr3g0100091 | 37.097 | 310 | 178 | 6 | 95 | 398 | 48 | 346 | 1.14e-53 | 181 |
Msa0651130 | MtrunA17_Chr2g0293681 | 36.418 | 335 | 198 | 7 | 20 | 342 | 54 | 385 | 2.04e-52 | 180 |
Msa0651130 | MtrunA17_Chr8g0337521 | 38.078 | 281 | 154 | 6 | 8 | 284 | 9 | 273 | 1.87e-50 | 171 |
Msa0651130 | MtrunA17_Chr8g0337341 | 51.974 | 152 | 71 | 2 | 3 | 153 | 5 | 155 | 2.44e-48 | 161 |
Msa0651130 | MtrunA17_Chr8g0336481 | 37.453 | 267 | 153 | 6 | 93 | 356 | 14 | 269 | 4.48e-47 | 162 |
Msa0651130 | MtrunA17_Chr1g0149241 | 31.202 | 391 | 220 | 12 | 11 | 394 | 9 | 357 | 6.11e-45 | 159 |
Msa0651130 | MtrunA17_Chr8g0337601 | 39.431 | 246 | 140 | 5 | 155 | 398 | 2 | 240 | 8.89e-44 | 152 |
Msa0651130 | MtrunA17_Chr8g0337511 | 36.777 | 242 | 147 | 3 | 154 | 395 | 4 | 239 | 1.26e-39 | 141 |
Msa0651130 | MtrunA17_Chr7g0273191 | 44.526 | 137 | 74 | 1 | 134 | 268 | 2 | 138 | 1.62e-31 | 117 |
Msa0651130 | MtrunA17_Chr8g0337551 | 45.312 | 128 | 70 | 0 | 157 | 284 | 7 | 134 | 2.28e-29 | 111 |
Msa0651130 | MtrunA17_Chr4g0070281 | 27.764 | 407 | 238 | 18 | 32 | 397 | 74 | 465 | 2.24e-23 | 101 |
Msa0651130 | MtrunA17_Chr8g0337541 | 34.694 | 147 | 90 | 4 | 4 | 145 | 1 | 146 | 4.75e-23 | 94.4 |
Msa0651130 | MtrunA17_Chr3g0093021 | 36.076 | 158 | 90 | 6 | 11 | 163 | 5 | 156 | 4.78e-21 | 89.7 |
Msa0651130 | MtrunA17_Chr7g0257711 | 44.860 | 107 | 57 | 2 | 291 | 395 | 6 | 112 | 8.17e-21 | 87.4 |
Msa0651130 | MtrunA17_Chr7g0270821 | 26.034 | 411 | 232 | 15 | 27 | 382 | 37 | 430 | 1.84e-19 | 90.1 |
Msa0651130 | MtrunA17_Chr3g0095221 | 27.415 | 383 | 223 | 15 | 27 | 370 | 41 | 407 | 2.24e-19 | 89.7 |
Msa0651130 | MtrunA17_Chr7g0255311 | 28.278 | 389 | 232 | 17 | 18 | 370 | 48 | 425 | 3.45e-19 | 89.4 |
Msa0651130 | MtrunA17_Chr2g0301091 | 25.943 | 424 | 260 | 18 | 14 | 397 | 37 | 446 | 4.21e-19 | 89.0 |
Msa0651130 | MtrunA17_Chr8g0387391 | 27.654 | 405 | 236 | 18 | 34 | 397 | 45 | 433 | 8.75e-19 | 87.8 |
Msa0651130 | MtrunA17_Chr8g0348491 | 25.537 | 419 | 265 | 14 | 14 | 397 | 38 | 444 | 1.69e-18 | 87.0 |
Msa0651130 | MtrunA17_Chr1g0202651 | 26.683 | 401 | 239 | 17 | 37 | 397 | 59 | 444 | 2.14e-18 | 86.7 |
Msa0651130 | MtrunA17_Chr5g0442221 | 25.799 | 407 | 257 | 14 | 27 | 397 | 38 | 435 | 2.66e-18 | 86.3 |
Msa0651130 | MtrunA17_Chr1g0202641 | 26.683 | 401 | 239 | 18 | 37 | 397 | 59 | 444 | 5.03e-18 | 86.3 |
Msa0651130 | MtrunA17_Chr1g0202641 | 25.935 | 401 | 242 | 18 | 37 | 397 | 559 | 944 | 1.98e-16 | 81.6 |
Msa0651130 | MtrunA17_Chr7g0248451 | 25.776 | 419 | 264 | 15 | 14 | 397 | 38 | 444 | 1.48e-17 | 84.3 |
Msa0651130 | MtrunA17_Chr1g0193961 | 29.316 | 307 | 173 | 12 | 35 | 307 | 45 | 341 | 2.22e-17 | 83.6 |
Msa0651130 | MtrunA17_Chr2g0330221 | 27.179 | 195 | 131 | 5 | 10 | 202 | 8 | 193 | 6.89e-17 | 79.0 |
Msa0651130 | MtrunA17_Chr7g0273181 | 38.384 | 99 | 58 | 2 | 303 | 398 | 1 | 99 | 9.54e-17 | 75.9 |
Msa0651130 | MtrunA17_Chr1g0202621 | 26.147 | 436 | 261 | 21 | 7 | 397 | 12 | 431 | 1.94e-15 | 77.8 |
Msa0651130 | MtrunA17_Chr4g0067811 | 23.958 | 384 | 242 | 16 | 25 | 371 | 32 | 402 | 4.93e-15 | 76.6 |
Msa0651130 | MtrunA17_Chr3g0130251 | 25.466 | 322 | 175 | 12 | 34 | 310 | 77 | 378 | 8.41e-15 | 75.9 |
Msa0651130 | MtrunA17_Chr8g0336471 | 35.294 | 85 | 53 | 2 | 4 | 86 | 1 | 85 | 4.36e-12 | 62.0 |
Msa0651130 | MtrunA17_Chr2g0295241 | 24.586 | 362 | 214 | 12 | 35 | 368 | 39 | 369 | 2.27e-11 | 65.1 |
Msa0651130 | MtrunA17_Chr8g0337561 | 34.545 | 110 | 64 | 3 | 291 | 398 | 11 | 114 | 7.49e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0651130 | AT3G59850.2 | 65.676 | 370 | 125 | 2 | 30 | 398 | 64 | 432 | 0.0 | 514 |
Msa0651130 | AT3G59850.1 | 65.676 | 370 | 125 | 2 | 30 | 398 | 20 | 388 | 0.0 | 513 |
Msa0651130 | AT2G43870.1 | 62.141 | 383 | 141 | 4 | 17 | 398 | 5 | 384 | 1.25e-178 | 502 |
Msa0651130 | AT1G05660.1 | 52.455 | 387 | 179 | 4 | 13 | 398 | 10 | 392 | 3.13e-148 | 426 |
Msa0651130 | AT1G05650.1 | 52.196 | 387 | 180 | 4 | 13 | 398 | 10 | 392 | 6.71e-147 | 422 |
Msa0651130 | AT2G43890.1 | 50.000 | 394 | 192 | 3 | 5 | 398 | 4 | 392 | 4.96e-143 | 412 |
Msa0651130 | AT2G43860.1 | 55.409 | 379 | 167 | 2 | 21 | 398 | 21 | 398 | 8.50e-142 | 410 |
Msa0651130 | AT1G65570.1 | 49.367 | 395 | 196 | 4 | 7 | 398 | 4 | 397 | 3.36e-140 | 405 |
Msa0651130 | AT2G43880.1 | 50.270 | 370 | 182 | 2 | 29 | 398 | 27 | 394 | 1.26e-132 | 386 |
Msa0651130 | AT2G43880.2 | 51.678 | 298 | 142 | 2 | 29 | 326 | 27 | 322 | 1.34e-105 | 315 |
Msa0651130 | AT1G17150.1 | 42.211 | 398 | 213 | 8 | 8 | 398 | 14 | 401 | 3.15e-93 | 286 |
Msa0651130 | AT2G40310.1 | 40.099 | 404 | 225 | 11 | 8 | 398 | 4 | 403 | 4.10e-91 | 280 |
Msa0651130 | AT3G07970.1 | 40.849 | 377 | 215 | 6 | 24 | 394 | 62 | 436 | 5.41e-91 | 281 |
Msa0651130 | AT1G43080.1 | 41.026 | 390 | 212 | 10 | 24 | 398 | 17 | 403 | 2.80e-90 | 278 |
Msa0651130 | AT4G13760.1 | 41.755 | 376 | 206 | 9 | 33 | 398 | 31 | 403 | 3.59e-90 | 278 |
Msa0651130 | AT2G15450.1 | 40.955 | 398 | 211 | 12 | 19 | 398 | 12 | 403 | 2.34e-88 | 273 |
Msa0651130 | AT1G02790.1 | 38.250 | 400 | 224 | 8 | 1 | 386 | 8 | 398 | 8.00e-88 | 273 |
Msa0651130 | AT2G15470.1 | 40.452 | 398 | 213 | 12 | 19 | 398 | 12 | 403 | 9.81e-88 | 271 |
Msa0651130 | AT3G57510.1 | 42.204 | 372 | 202 | 7 | 30 | 395 | 65 | 429 | 4.74e-87 | 271 |
Msa0651130 | AT2G15460.1 | 40.759 | 395 | 210 | 12 | 19 | 395 | 12 | 400 | 7.49e-87 | 269 |
Msa0651130 | AT2G33160.1 | 40.000 | 400 | 222 | 10 | 14 | 397 | 5 | 402 | 8.53e-87 | 277 |
Msa0651130 | AT1G43090.1 | 39.949 | 393 | 216 | 10 | 8 | 390 | 13 | 395 | 1.37e-86 | 270 |
Msa0651130 | AT1G43100.1 | 41.099 | 382 | 207 | 10 | 24 | 390 | 17 | 395 | 1.68e-86 | 270 |
Msa0651130 | AT1G70500.1 | 39.896 | 386 | 221 | 9 | 21 | 398 | 54 | 436 | 5.82e-86 | 269 |
Msa0651130 | AT1G78400.1 | 40.323 | 372 | 215 | 6 | 32 | 398 | 34 | 403 | 1.18e-85 | 266 |
Msa0651130 | AT2G26620.1 | 41.176 | 374 | 209 | 8 | 33 | 398 | 31 | 401 | 9.40e-84 | 261 |
Msa0651130 | AT4G18180.1 | 37.532 | 389 | 225 | 6 | 27 | 397 | 33 | 421 | 1.09e-83 | 262 |
Msa0651130 | AT1G80170.1 | 39.267 | 382 | 222 | 8 | 25 | 398 | 45 | 424 | 4.54e-83 | 261 |
Msa0651130 | AT3G07830.1 | 37.722 | 395 | 227 | 11 | 10 | 397 | 5 | 387 | 1.14e-81 | 256 |
Msa0651130 | AT2G41850.1 | 41.444 | 374 | 200 | 9 | 31 | 395 | 66 | 429 | 1.18e-81 | 257 |
Msa0651130 | AT1G23460.2 | 41.192 | 386 | 212 | 12 | 23 | 398 | 32 | 412 | 1.09e-80 | 254 |
Msa0651130 | AT3G07840.1 | 38.133 | 375 | 218 | 9 | 30 | 397 | 20 | 387 | 1.29e-80 | 253 |
Msa0651130 | AT1G23460.1 | 41.192 | 386 | 212 | 12 | 23 | 398 | 56 | 436 | 1.89e-80 | 254 |
Msa0651130 | AT3G14040.1 | 39.578 | 379 | 217 | 6 | 26 | 397 | 64 | 437 | 6.40e-80 | 253 |
Msa0651130 | AT3G07820.1 | 38.936 | 357 | 210 | 7 | 46 | 397 | 33 | 386 | 7.88e-80 | 251 |
Msa0651130 | AT5G48140.1 | 37.008 | 381 | 225 | 9 | 24 | 397 | 14 | 386 | 2.82e-78 | 247 |
Msa0651130 | AT3G15720.1 | 38.501 | 387 | 219 | 7 | 20 | 398 | 14 | 389 | 8.09e-77 | 245 |
Msa0651130 | AT3G15720.3 | 38.501 | 387 | 219 | 7 | 20 | 398 | 13 | 388 | 9.76e-77 | 245 |
Msa0651130 | AT3G07850.1 | 38.770 | 374 | 217 | 6 | 31 | 397 | 68 | 436 | 1.49e-76 | 244 |
Msa0651130 | AT3G15720.2 | 38.501 | 387 | 216 | 8 | 20 | 398 | 13 | 385 | 3.35e-75 | 241 |
Msa0651130 | AT5G14650.1 | 37.795 | 381 | 214 | 9 | 8 | 370 | 11 | 386 | 3.60e-75 | 240 |
Msa0651130 | AT4G35670.1 | 38.172 | 372 | 217 | 9 | 33 | 398 | 24 | 388 | 3.23e-74 | 236 |
Msa0651130 | AT1G80140.1 | 41.983 | 343 | 181 | 9 | 66 | 398 | 2 | 336 | 4.50e-74 | 234 |
Msa0651130 | AT1G56710.1 | 38.663 | 419 | 226 | 13 | 7 | 398 | 13 | 427 | 1.00e-72 | 234 |
Msa0651130 | AT1G60590.1 | 37.010 | 408 | 213 | 11 | 30 | 398 | 120 | 522 | 3.91e-72 | 235 |
Msa0651130 | AT5G27530.1 | 34.158 | 404 | 244 | 8 | 2 | 398 | 21 | 409 | 2.01e-71 | 231 |
Msa0651130 | AT1G10640.1 | 35.980 | 403 | 221 | 10 | 30 | 398 | 116 | 515 | 2.29e-71 | 233 |
Msa0651130 | AT5G17200.1 | 37.598 | 383 | 204 | 8 | 35 | 391 | 41 | 414 | 4.79e-71 | 229 |
Msa0651130 | AT1G02460.1 | 38.760 | 387 | 213 | 14 | 33 | 398 | 89 | 472 | 3.41e-69 | 226 |
Msa0651130 | AT5G44840.1 | 34.656 | 378 | 223 | 10 | 33 | 398 | 24 | 389 | 7.55e-69 | 223 |
Msa0651130 | AT3G15720.4 | 38.973 | 331 | 187 | 5 | 75 | 398 | 3 | 325 | 3.81e-66 | 216 |
Msa0651130 | AT4G01890.1 | 37.815 | 357 | 199 | 12 | 33 | 370 | 65 | 417 | 4.48e-65 | 215 |
Msa0651130 | AT3G26610.1 | 34.908 | 381 | 226 | 10 | 33 | 396 | 67 | 442 | 5.27e-64 | 212 |
Msa0651130 | AT1G48100.1 | 35.602 | 382 | 227 | 11 | 33 | 398 | 80 | 458 | 1.22e-63 | 211 |
Msa0651130 | AT4G32380.1 | 37.651 | 332 | 192 | 7 | 47 | 370 | 41 | 365 | 9.12e-62 | 206 |
Msa0651130 | AT5G44830.1 | 34.756 | 328 | 194 | 6 | 75 | 398 | 19 | 330 | 2.23e-58 | 194 |
Msa0651130 | AT5G39910.1 | 32.771 | 415 | 202 | 11 | 6 | 398 | 9 | 368 | 2.71e-58 | 194 |
Msa0651130 | AT4G32375.1 | 41.923 | 260 | 143 | 5 | 114 | 371 | 13 | 266 | 1.33e-57 | 194 |
Msa0651130 | AT4G35670.2 | 38.328 | 287 | 168 | 6 | 114 | 398 | 2 | 281 | 4.56e-56 | 186 |
Msa0651130 | AT4G32370.1 | 40.134 | 299 | 157 | 10 | 47 | 332 | 49 | 338 | 1.55e-55 | 186 |
Msa0651130 | AT1G80170.2 | 40.449 | 267 | 152 | 6 | 25 | 285 | 45 | 310 | 2.04e-55 | 186 |
Msa0651130 | AT5G14650.2 | 37.500 | 296 | 165 | 6 | 8 | 285 | 11 | 304 | 5.92e-55 | 184 |
Msa0651130 | AT4G32380.2 | 33.131 | 329 | 170 | 5 | 47 | 370 | 41 | 324 | 2.17e-47 | 167 |
Msa0651130 | AT3G48950.1 | 27.419 | 434 | 256 | 17 | 10 | 397 | 15 | 435 | 1.21e-23 | 102 |
Msa0651130 | AT1G19170.1 | 28.013 | 307 | 193 | 11 | 110 | 397 | 181 | 478 | 9.25e-23 | 100 |
Msa0651130 | AT4G23820.1 | 27.970 | 404 | 234 | 17 | 34 | 397 | 42 | 428 | 6.48e-21 | 94.4 |
Msa0651130 | AT3G61490.5 | 25.450 | 444 | 271 | 16 | 4 | 397 | 16 | 449 | 7.69e-21 | 94.7 |
Msa0651130 | AT3G61490.2 | 25.450 | 444 | 271 | 16 | 4 | 397 | 1 | 434 | 9.41e-21 | 94.4 |
Msa0651130 | AT3G61490.3 | 25.450 | 444 | 271 | 16 | 4 | 397 | 1 | 434 | 9.41e-21 | 94.4 |
Msa0651130 | AT3G61490.1 | 25.450 | 444 | 271 | 16 | 4 | 397 | 1 | 434 | 9.41e-21 | 94.4 |
Msa0651130 | AT3G62110.1 | 27.147 | 361 | 220 | 13 | 16 | 342 | 26 | 377 | 1.20e-20 | 94.0 |
Msa0651130 | AT3G62110.2 | 27.147 | 361 | 220 | 13 | 16 | 342 | 26 | 377 | 1.20e-20 | 94.0 |
Msa0651130 | AT3G61490.4 | 25.450 | 444 | 271 | 16 | 4 | 397 | 114 | 547 | 2.05e-20 | 93.6 |
Msa0651130 | AT3G42950.1 | 26.139 | 417 | 242 | 15 | 27 | 397 | 60 | 456 | 4.00e-20 | 92.4 |
Msa0651130 | AT2G23900.1 | 26.250 | 400 | 243 | 15 | 37 | 397 | 60 | 446 | 2.00e-19 | 90.5 |
Msa0651130 | AT5G49215.1 | 26.055 | 403 | 246 | 15 | 35 | 398 | 45 | 434 | 7.96e-19 | 88.2 |
Msa0651130 | AT5G49215.2 | 26.055 | 403 | 246 | 15 | 35 | 398 | 43 | 432 | 8.49e-19 | 88.2 |
Msa0651130 | AT3G16850.1 | 25.116 | 430 | 270 | 13 | 7 | 397 | 10 | 426 | 1.21e-18 | 87.8 |
Msa0651130 | AT5G41870.1 | 26.303 | 403 | 256 | 12 | 27 | 397 | 39 | 432 | 1.32e-18 | 87.8 |
Msa0651130 | AT4G33440.1 | 27.986 | 293 | 154 | 13 | 128 | 381 | 185 | 459 | 6.23e-16 | 79.7 |
Msa0651130 | AT4G23500.1 | 24.638 | 414 | 259 | 19 | 22 | 397 | 59 | 457 | 8.55e-16 | 79.3 |
Msa0651130 | AT3G06770.2 | 25.432 | 405 | 244 | 18 | 34 | 397 | 44 | 431 | 1.62e-12 | 69.3 |
Msa0651130 | AT3G06770.5 | 25.432 | 405 | 244 | 18 | 34 | 397 | 45 | 432 | 1.69e-12 | 68.9 |
Find 113 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCATCACCGGTTCGAATTT+TGG | 0.125064 | 4_3:-58477571 | None:intergenic |
CCCCTTGTGTATTTACATTT+TGG | 0.138592 | 4_3:-58477467 | None:intergenic |
CCGGGGCAGCCTTCGTTGTT+TGG | 0.192728 | 4_3:-58478004 | None:intergenic |
TTGTTACTTAAATTCCTTTA+CGG | 0.225568 | 4_3:+58476344 | Msa0651130:CDS |
CGTTGTTTGGGCAATAATTC+TGG | 0.240499 | 4_3:-58477991 | None:intergenic |
GTCGGTGTTTGGGCTGTTTC+CGG | 0.278257 | 4_3:-58477505 | None:intergenic |
CTTGGAACTGCAACATTTAG+TGG | 0.283715 | 4_3:+58476519 | Msa0651130:CDS |
GGTCAATTACAATTGGGTTT+TGG | 0.298931 | 4_3:-58477970 | None:intergenic |
CGGGGCAGCCTTCGTTGTTT+GGG | 0.304377 | 4_3:-58478003 | None:intergenic |
ATGTGGATGCCGTCGGTGTT+TGG | 0.333429 | 4_3:-58477516 | None:intergenic |
GCTATTTCCATAACCATTGA+TGG | 0.348650 | 4_3:+58476558 | Msa0651130:CDS |
TAATTCTGGTCAATTACAAT+TGG | 0.351868 | 4_3:-58477977 | None:intergenic |
GTGGACCGGGACATGGAATA+AGG | 0.352685 | 4_3:+58477646 | Msa0651130:CDS |
ACATTCACAGGAACTCAAAA+TGG | 0.357786 | 4_3:+58477866 | Msa0651130:CDS |
TGGTGACTTGGGAGGACATT+TGG | 0.366009 | 4_3:-58477539 | None:intergenic |
ATCCGCGGCGGTGTGCTTGA+TGG | 0.379802 | 4_3:+58476663 | Msa0651130:CDS |
CAAAGTGCCATCAATGGTTA+TGG | 0.385028 | 4_3:-58476565 | None:intergenic |
ATTTCTAAATGTATGGTCTA+AGG | 0.389157 | 4_3:+58476443 | Msa0651130:CDS |
CCACAAGGGAAATTCTTACT+TGG | 0.390390 | 4_3:+58476501 | Msa0651130:CDS |
CAGATGTTCCATGAATGTTT+TGG | 0.392328 | 4_3:-58478285 | None:intergenic |
TGTGGATGCCGTCGGTGTTT+GGG | 0.395535 | 4_3:-58477515 | None:intergenic |
CCATGCCGGTGGAGCTGCAT+TGG | 0.395607 | 4_3:+58478420 | Msa0651130:CDS |
TACATTTAGAAATGCCTTTG+TGG | 0.401933 | 4_3:-58476433 | None:intergenic |
TGGTGTTAGAATAAAGTCTT+GGG | 0.413293 | 4_3:+58477886 | Msa0651130:CDS |
GACAAAAGTAATTGCCCAAC+TGG | 0.419215 | 4_3:+58476720 | Msa0651130:CDS |
ACATACAATGTAATCAACTA+TGG | 0.426913 | 4_3:+58476384 | Msa0651130:CDS |
ACGTAAATTGCCGCCGGATA+AGG | 0.427718 | 4_3:-58476477 | None:intergenic |
AATTCTGGTCAATTACAATT+GGG | 0.433868 | 4_3:-58477976 | None:intergenic |
TCATCTAATTACCGTGTAAC+CGG | 0.434207 | 4_3:+58476594 | Msa0651130:CDS |
GGAGTTGAGGATGGTGACTT+GGG | 0.435300 | 4_3:-58477550 | None:intergenic |
CAAAGGCATTTCTAAATGTA+TGG | 0.435961 | 4_3:+58476436 | Msa0651130:CDS |
GTTAAAACGGTTACATTCAC+AGG | 0.436737 | 4_3:+58477854 | Msa0651130:CDS |
CAACGAAGGCTGCCCCGGTC+AGG | 0.438018 | 4_3:+58478009 | Msa0651130:CDS |
GGTGATGATTGTATCTCAAT+TGG | 0.439090 | 4_3:+58477585 | Msa0651130:CDS |
GGTGTCTATAAGCAACTCTC+TGG | 0.439366 | 4_3:-58478454 | None:intergenic |
GTAACATACCAAAACATTCA+TGG | 0.441891 | 4_3:+58478277 | Msa0651130:CDS |
CATTAACCATGATTGCATCT+TGG | 0.446209 | 4_3:-58477946 | None:intergenic |
TGTTGCAGTATTGGAAGCTT+GGG | 0.450951 | 4_3:+58477794 | Msa0651130:intron |
TTGTTGCAGTATTGGAAGCT+TGG | 0.451276 | 4_3:+58477793 | Msa0651130:intron |
TGGAGTTGAGGATGGTGACT+TGG | 0.452456 | 4_3:-58477551 | None:intergenic |
ATGGTGTTAGAATAAAGTCT+TGG | 0.456513 | 4_3:+58477885 | Msa0651130:CDS |
AAATTATTAAATCAGGCCTC+TGG | 0.458353 | 4_3:+58478238 | Msa0651130:intron |
CATAACCATTGATGGCACTT+TGG | 0.461412 | 4_3:+58476566 | Msa0651130:CDS |
TGAAGTTTCAGCATGTTGAC+GGG | 0.462893 | 4_3:+58476634 | Msa0651130:CDS |
GCCCTGGTACAAGTAATTTG+TGG | 0.471238 | 4_3:+58477607 | Msa0651130:CDS |
CCAAACAACGAAGGCTGCCC+CGG | 0.472065 | 4_3:+58478004 | Msa0651130:CDS |
TTGAAGTTTCAGCATGTTGA+CGG | 0.472330 | 4_3:+58476633 | Msa0651130:CDS |
CATGCCGGTGGAGCTGCATT+GGG | 0.477537 | 4_3:+58478421 | Msa0651130:CDS |
GTGATTATGATTAAGAGAAA+AGG | 0.478653 | 4_3:-58476315 | None:intergenic |
GGCATGTTCCTCGCCTTATC+CGG | 0.479418 | 4_3:+58476464 | Msa0651130:CDS |
TGAAAACATTGCATGTGGAC+CGG | 0.479846 | 4_3:+58477632 | Msa0651130:CDS |
ACTATTCATCGATGTCAAAC+CGG | 0.483988 | 4_3:-58477415 | None:intergenic |
GACATTACCGTGGCTCCAGT+TGG | 0.484371 | 4_3:-58476735 | None:intergenic |
AACCATTGATGGCACTTTGG+TGG | 0.486786 | 4_3:+58476569 | Msa0651130:CDS |
ACAAAATGTGACAGTTAAAA+CGG | 0.489424 | 4_3:+58477841 | Msa0651130:CDS |
CTCAACTCCAAAATTCGAAC+CGG | 0.494726 | 4_3:+58477564 | Msa0651130:CDS |
GGCATCCATTGAACGCTATG+TGG | 0.499118 | 4_3:-58477446 | None:intergenic |
ATGTTCCACATAGCGTTCAA+TGG | 0.499526 | 4_3:+58477441 | Msa0651130:CDS |
TGGACAAGGTACTGCCTTGT+GGG | 0.500715 | 4_3:+58476683 | Msa0651130:CDS |
GAAAACATTGCATGTGGACC+GGG | 0.509461 | 4_3:+58477633 | Msa0651130:CDS |
ATTGCATGTGGACCGGGACA+TGG | 0.516777 | 4_3:+58477639 | Msa0651130:CDS |
ATCCACAAATTACTTGTACC+AGG | 0.519856 | 4_3:-58477609 | None:intergenic |
ATGAAACCAATTACCTGACC+GGG | 0.524105 | 4_3:-58478022 | None:intergenic |
GACCTAGCAATGGATTTGTA+AGG | 0.526984 | 4_3:+58477912 | Msa0651130:CDS |
ACATTACCGTGGCTCCAGTT+GGG | 0.535346 | 4_3:-58476734 | None:intergenic |
TCATGGAACATCTGCAACAC+AGG | 0.537996 | 4_3:+58478294 | Msa0651130:CDS |
TGAACCCAATGCAGCTCCAC+CGG | 0.545576 | 4_3:-58478425 | None:intergenic |
AAATTCCTTTACGGCAAAAG+CGG | 0.545972 | 4_3:+58476353 | Msa0651130:CDS |
TATGAAACCAATTACCTGAC+CGG | 0.547446 | 4_3:-58478023 | None:intergenic |
TTCCTTACAAATCCATTGCT+AGG | 0.550177 | 4_3:-58477914 | None:intergenic |
AGCCACCAAAGTGCCATCAA+TGG | 0.553338 | 4_3:-58476571 | None:intergenic |
AAGAACCTTATTCCATGTCC+CGG | 0.555681 | 4_3:-58477651 | None:intergenic |
TTCATCTTTATTCCACTGCA+CGG | 0.559952 | 4_3:-58478349 | None:intergenic |
ACCACTCACTTTAATTCCAG+AGG | 0.562833 | 4_3:-58478254 | None:intergenic |
GGGGTAAATATCATAGCAGC+CGG | 0.565921 | 4_3:+58477486 | Msa0651130:CDS |
GGCGGTGTGCTTGATGGACA+AGG | 0.570853 | 4_3:+58476669 | Msa0651130:CDS |
GTTGACGGGGTTTCGATCCG+CGG | 0.574746 | 4_3:+58476648 | Msa0651130:CDS |
AACTATGGAGCCAAGCCAGA+TGG | 0.575309 | 4_3:+58476399 | Msa0651130:CDS |
CTTGGGAGGACATTTGGATG+TGG | 0.581823 | 4_3:-58477533 | None:intergenic |
TAATTGCCCAACTGGAGCCA+CGG | 0.594866 | 4_3:+58476728 | Msa0651130:CDS |
GATTGTATCTCAATTGGCCC+TGG | 0.595028 | 4_3:+58477591 | Msa0651130:CDS |
GTGCAGTGGAATAAAGATGA+AGG | 0.599831 | 4_3:+58478351 | Msa0651130:CDS |
ATGGACAAGGTACTGCCTTG+TGG | 0.600344 | 4_3:+58476682 | Msa0651130:CDS |
CCAATGCAGCTCCACCGGCA+TGG | 0.602835 | 4_3:-58478420 | None:intergenic |
TCCACAAATTACTTGTACCA+GGG | 0.607306 | 4_3:-58477608 | None:intergenic |
GCCTCTGGAATTAAAGTGAG+TGG | 0.609415 | 4_3:+58478253 | Msa0651130:CDS |
GCCAAAATGTAAATACACAA+GGG | 0.612929 | 4_3:+58477466 | Msa0651130:CDS |
GGATGGAAGTTAAATGAACC+AGG | 0.616130 | 4_3:+58477815 | Msa0651130:CDS |
TGGATTGAAAACATTGCATG+TGG | 0.620040 | 4_3:+58477627 | Msa0651130:CDS |
GGAAACAGCCCAAACACCGA+CGG | 0.621233 | 4_3:+58477507 | Msa0651130:CDS |
GAAGCATCATGTAACCATGC+CGG | 0.625133 | 4_3:+58478406 | Msa0651130:CDS |
AGTTCAAAGTATCCGTGCAG+TGG | 0.625693 | 4_3:+58478337 | Msa0651130:CDS |
CCAAGTAAGAATTTCCCTTG+TGG | 0.626504 | 4_3:-58476501 | None:intergenic |
AATTGAGATACAATCATCAC+CGG | 0.627312 | 4_3:-58477583 | None:intergenic |
GCAGTATTGGAAGCTTGGGA+TGG | 0.632087 | 4_3:+58477798 | Msa0651130:intron |
ATGTTCCTCGCCTTATCCGG+CGG | 0.639177 | 4_3:+58476467 | Msa0651130:CDS |
GCATCATGTAACCATGCCGG+TGG | 0.640438 | 4_3:+58478409 | Msa0651130:CDS |
CCAAAATGTAAATACACAAG+GGG | 0.642210 | 4_3:+58477467 | Msa0651130:CDS |
TCTTGGGGTAGACCTAGCAA+TGG | 0.646022 | 4_3:+58477902 | Msa0651130:CDS |
TGTGGTACGTAAATTGCCGC+CGG | 0.646318 | 4_3:-58476483 | None:intergenic |
TGCCAAAATGTAAATACACA+AGG | 0.651621 | 4_3:+58477465 | Msa0651130:CDS |
CATTTGGATGTGGATGCCGT+CGG | 0.658243 | 4_3:-58477523 | None:intergenic |
GACGGGGTTTCGATCCGCGG+CGG | 0.663495 | 4_3:+58476651 | Msa0651130:CDS |
GAAGTTTCAGCATGTTGACG+GGG | 0.664703 | 4_3:+58476635 | Msa0651130:CDS |
AATTGCCGCCGGATAAGGCG+AGG | 0.666819 | 4_3:-58476472 | None:intergenic |
GTCCATCAAGCACACCGCCG+CGG | 0.670643 | 4_3:-58476665 | None:intergenic |
AATTATTGCCCAAACAACGA+AGG | 0.671027 | 4_3:+58477995 | Msa0651130:CDS |
GTTGAGGATGGTGACTTGGG+AGG | 0.672905 | 4_3:-58477547 | None:intergenic |
GCGGCAATTTACGTACCACA+AGG | 0.682523 | 4_3:+58476486 | Msa0651130:CDS |
TGGTAAAACTGATTCCACAA+AGG | 0.694530 | 4_3:+58476419 | Msa0651130:CDS |
GGTGTTAGAATAAAGTCTTG+GGG | 0.707177 | 4_3:+58477887 | Msa0651130:CDS |
CGGCAATTTACGTACCACAA+GGG | 0.730607 | 4_3:+58476487 | Msa0651130:CDS |
TGAAACCAATTACCTGACCG+GGG | 0.733003 | 4_3:-58478021 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAATATGTCAATAAT+TGG | + | chr4_3:58477003-58477022 | Msa0651130:intron | 10.0% |
!!! | TTTTATAATGAGAATAATAA+TGG | + | chr4_3:58477758-58477777 | Msa0651130:intron | 10.0% |
!! | AAAAATAATATGTCAATAAT+TGG | + | chr4_3:58477003-58477022 | Msa0651130:intron | 10.0% |
!!! | TTTTATAATGAGAATAATAA+TGG | + | chr4_3:58477758-58477777 | Msa0651130:intron | 10.0% |
!! | AATTAAAGATTAATAAAACC+AGG | - | chr4_3:58476818-58476837 | None:intergenic | 15.0% |
!!! | TTTTGAGTTTAATTATTTAG+TGG | + | chr4_3:58476875-58476894 | Msa0651130:intron | 15.0% |
!!! | TTTGAGTTTAATTATTTAGT+GGG | + | chr4_3:58476876-58476895 | Msa0651130:intron | 15.0% |
!! | AAATGTTATATACAAATAAG+TGG | + | chr4_3:58477126-58477145 | Msa0651130:intron | 15.0% |
!!! | TTTATTTTATTGAAGAAAAG+AGG | + | chr4_3:58477313-58477332 | Msa0651130:intron | 15.0% |
!!! | TGGTTAATTTTTTTTTTCTA+TGG | + | chr4_3:58477345-58477364 | Msa0651130:intron | 15.0% |
!!! | TTAATTTTTTTTTTCTATGG+TGG | + | chr4_3:58477348-58477367 | Msa0651130:intron | 15.0% |
!! | TCAAAAAATATTATGATTAC+CGG | + | chr4_3:58477396-58477415 | Msa0651130:CDS | 15.0% |
!! | TAAGATAATACTTTCTTAAA+AGG | - | chr4_3:58477709-58477728 | None:intergenic | 15.0% |
!! | AATTAAAGATTAATAAAACC+AGG | - | chr4_3:58476818-58476837 | None:intergenic | 15.0% |
!!! | TTTTGAGTTTAATTATTTAG+TGG | + | chr4_3:58476875-58476894 | Msa0651130:intron | 15.0% |
!!! | TTTGAGTTTAATTATTTAGT+GGG | + | chr4_3:58476876-58476895 | Msa0651130:intron | 15.0% |
!! | AAATGTTATATACAAATAAG+TGG | + | chr4_3:58477126-58477145 | Msa0651130:intron | 15.0% |
!!! | TTTATTTTATTGAAGAAAAG+AGG | + | chr4_3:58477313-58477332 | Msa0651130:intron | 15.0% |
!!! | TGGTTAATTTTTTTTTTCTA+TGG | + | chr4_3:58477345-58477364 | Msa0651130:intron | 15.0% |
!!! | TTAATTTTTTTTTTCTATGG+TGG | + | chr4_3:58477348-58477367 | Msa0651130:intron | 15.0% |
!! | TCAAAAAATATTATGATTAC+CGG | + | chr4_3:58477396-58477415 | Msa0651130:CDS | 15.0% |
!! | TAAGATAATACTTTCTTAAA+AGG | - | chr4_3:58477709-58477728 | None:intergenic | 15.0% |
!!! | TTGTTACTTAAATTCCTTTA+CGG | + | chr4_3:58476344-58476363 | Msa0651130:CDS | 20.0% |
!!! | AATCTTTAATTTGAACAAGT+TGG | + | chr4_3:58476827-58476846 | Msa0651130:intron | 20.0% |
!! | ATTGGTTATATTATTCTTTC+TGG | + | chr4_3:58477021-58477040 | Msa0651130:intron | 20.0% |
!! | ATCTGACTAAAAAATTTAAC+CGG | + | chr4_3:58478087-58478106 | Msa0651130:intron | 20.0% |
!! | GTTGTTGAAATTATTAAATC+AGG | + | chr4_3:58478231-58478250 | Msa0651130:intron | 20.0% |
!!! | TTGTTACTTAAATTCCTTTA+CGG | + | chr4_3:58476344-58476363 | Msa0651130:CDS | 20.0% |
!!! | AATCTTTAATTTGAACAAGT+TGG | + | chr4_3:58476827-58476846 | Msa0651130:intron | 20.0% |
!! | ATTGGTTATATTATTCTTTC+TGG | + | chr4_3:58477021-58477040 | Msa0651130:intron | 20.0% |
!! | ATCTGACTAAAAAATTTAAC+CGG | + | chr4_3:58478087-58478106 | Msa0651130:intron | 20.0% |
!! | GTTGTTGAAATTATTAAATC+AGG | + | chr4_3:58478231-58478250 | Msa0651130:intron | 20.0% |
! | GTGATTATGATTAAGAGAAA+AGG | - | chr4_3:58476318-58476337 | None:intergenic | 25.0% |
! | ACATACAATGTAATCAACTA+TGG | + | chr4_3:58476384-58476403 | Msa0651130:CDS | 25.0% |
! | ATTTCTAAATGTATGGTCTA+AGG | + | chr4_3:58476443-58476462 | Msa0651130:CDS | 25.0% |
! | TAAAACCAGGCAAATAAATA+AGG | - | chr4_3:58476805-58476824 | None:intergenic | 25.0% |
! | TTTAATTATTTAGTGGGAGT+AGG | + | chr4_3:58476882-58476901 | Msa0651130:intron | 25.0% |
! | ATACTTAATATTCAACTGCT+TGG | + | chr4_3:58476929-58476948 | Msa0651130:intron | 25.0% |
! | ATAGAATGATATACTAGTGT+AGG | + | chr4_3:58477150-58477169 | Msa0651130:intron | 25.0% |
! | TCACGTTCTATTGAAATTAT+TGG | + | chr4_3:58477211-58477230 | Msa0651130:intron | 25.0% |
!! | TTGAATATTTGTTGCAGTAT+TGG | + | chr4_3:58477785-58477804 | Msa0651130:intron | 25.0% |
! | ACAAAATGTGACAGTTAAAA+CGG | + | chr4_3:58477841-58477860 | Msa0651130:CDS | 25.0% |
! | AATTCTGGTCAATTACAATT+GGG | - | chr4_3:58477979-58477998 | None:intergenic | 25.0% |
! | TAATTCTGGTCAATTACAAT+TGG | - | chr4_3:58477980-58477999 | None:intergenic | 25.0% |
! | TTGGTTTCATAACATCTTAT+TGG | + | chr4_3:58478035-58478054 | Msa0651130:intron | 25.0% |
! | TCAAACAAAATTGATGTAAC+CGG | - | chr4_3:58478109-58478128 | None:intergenic | 25.0% |
! | GTGATTATGATTAAGAGAAA+AGG | - | chr4_3:58476318-58476337 | None:intergenic | 25.0% |
! | ACATACAATGTAATCAACTA+TGG | + | chr4_3:58476384-58476403 | Msa0651130:CDS | 25.0% |
! | ATTTCTAAATGTATGGTCTA+AGG | + | chr4_3:58476443-58476462 | Msa0651130:CDS | 25.0% |
! | TAAAACCAGGCAAATAAATA+AGG | - | chr4_3:58476805-58476824 | None:intergenic | 25.0% |
! | TTTAATTATTTAGTGGGAGT+AGG | + | chr4_3:58476882-58476901 | Msa0651130:intron | 25.0% |
! | ATACTTAATATTCAACTGCT+TGG | + | chr4_3:58476929-58476948 | Msa0651130:intron | 25.0% |
! | ATAGAATGATATACTAGTGT+AGG | + | chr4_3:58477150-58477169 | Msa0651130:intron | 25.0% |
! | TCACGTTCTATTGAAATTAT+TGG | + | chr4_3:58477211-58477230 | Msa0651130:intron | 25.0% |
!! | TTGAATATTTGTTGCAGTAT+TGG | + | chr4_3:58477785-58477804 | Msa0651130:intron | 25.0% |
! | ACAAAATGTGACAGTTAAAA+CGG | + | chr4_3:58477841-58477860 | Msa0651130:CDS | 25.0% |
! | AATTCTGGTCAATTACAATT+GGG | - | chr4_3:58477979-58477998 | None:intergenic | 25.0% |
! | TAATTCTGGTCAATTACAAT+TGG | - | chr4_3:58477980-58477999 | None:intergenic | 25.0% |
! | TTGGTTTCATAACATCTTAT+TGG | + | chr4_3:58478035-58478054 | Msa0651130:intron | 25.0% |
! | TCAAACAAAATTGATGTAAC+CGG | - | chr4_3:58478109-58478128 | None:intergenic | 25.0% |
TACATTTAGAAATGCCTTTG+TGG | - | chr4_3:58476436-58476455 | None:intergenic | 30.0% | |
!! | CAAAGGCATTTCTAAATGTA+TGG | + | chr4_3:58476436-58476455 | Msa0651130:CDS | 30.0% |
TAACCGGTAAAAATGGTAAT+TGG | + | chr4_3:58476610-58476629 | Msa0651130:CDS | 30.0% | |
!! | CAACCAATTACCATTTTTAC+CGG | - | chr4_3:58476616-58476635 | None:intergenic | 30.0% |
CTTGTGGGATTGTAAAAATT+CGG | + | chr4_3:58476698-58476717 | Msa0651130:CDS | 30.0% | |
! | TAGGCAATGATATAATGGAA+CGG | + | chr4_3:58476901-58476920 | Msa0651130:intron | 30.0% |
GTATATAGAAGTTGAAGCAT+TGG | + | chr4_3:58476962-58476981 | Msa0651130:intron | 30.0% | |
!! | ATTGGTTTGCGTAATATTGA+AGG | - | chr4_3:58477069-58477088 | None:intergenic | 30.0% |
TATGTCTGATCAATTCGAAT+TGG | - | chr4_3:58477087-58477106 | None:intergenic | 30.0% | |
TGCCAAAATGTAAATACACA+AGG | + | chr4_3:58477465-58477484 | Msa0651130:CDS | 30.0% | |
GCCAAAATGTAAATACACAA+GGG | + | chr4_3:58477466-58477485 | Msa0651130:CDS | 30.0% | |
CCAAAATGTAAATACACAAG+GGG | + | chr4_3:58477467-58477486 | Msa0651130:CDS | 30.0% | |
AATTGAGATACAATCATCAC+CGG | - | chr4_3:58477586-58477605 | None:intergenic | 30.0% | |
! | ATGGTGTTAGAATAAAGTCT+TGG | + | chr4_3:58477885-58477904 | Msa0651130:CDS | 30.0% |
! | TGGTGTTAGAATAAAGTCTT+GGG | + | chr4_3:58477886-58477905 | Msa0651130:CDS | 30.0% |
! | TACATCAACTTTGTTTGACT+GGG | - | chr4_3:58478068-58478087 | None:intergenic | 30.0% |
! | ATACATCAACTTTGTTTGAC+TGG | - | chr4_3:58478069-58478088 | None:intergenic | 30.0% |
AAATTATTAAATCAGGCCTC+TGG | + | chr4_3:58478238-58478257 | Msa0651130:intron | 30.0% | |
GTAACATACCAAAACATTCA+TGG | + | chr4_3:58478277-58478296 | Msa0651130:CDS | 30.0% | |
TACATTTAGAAATGCCTTTG+TGG | - | chr4_3:58476436-58476455 | None:intergenic | 30.0% | |
!! | CAAAGGCATTTCTAAATGTA+TGG | + | chr4_3:58476436-58476455 | Msa0651130:CDS | 30.0% |
TAACCGGTAAAAATGGTAAT+TGG | + | chr4_3:58476610-58476629 | Msa0651130:CDS | 30.0% | |
!! | CAACCAATTACCATTTTTAC+CGG | - | chr4_3:58476616-58476635 | None:intergenic | 30.0% |
CTTGTGGGATTGTAAAAATT+CGG | + | chr4_3:58476698-58476717 | Msa0651130:CDS | 30.0% | |
! | TAGGCAATGATATAATGGAA+CGG | + | chr4_3:58476901-58476920 | Msa0651130:intron | 30.0% |
GTATATAGAAGTTGAAGCAT+TGG | + | chr4_3:58476962-58476981 | Msa0651130:intron | 30.0% | |
!! | ATTGGTTTGCGTAATATTGA+AGG | - | chr4_3:58477069-58477088 | None:intergenic | 30.0% |
TATGTCTGATCAATTCGAAT+TGG | - | chr4_3:58477087-58477106 | None:intergenic | 30.0% | |
TGCCAAAATGTAAATACACA+AGG | + | chr4_3:58477465-58477484 | Msa0651130:CDS | 30.0% | |
GCCAAAATGTAAATACACAA+GGG | + | chr4_3:58477466-58477485 | Msa0651130:CDS | 30.0% | |
CCAAAATGTAAATACACAAG+GGG | + | chr4_3:58477467-58477486 | Msa0651130:CDS | 30.0% | |
AATTGAGATACAATCATCAC+CGG | - | chr4_3:58477586-58477605 | None:intergenic | 30.0% | |
! | ATGGTGTTAGAATAAAGTCT+TGG | + | chr4_3:58477885-58477904 | Msa0651130:CDS | 30.0% |
! | TGGTGTTAGAATAAAGTCTT+GGG | + | chr4_3:58477886-58477905 | Msa0651130:CDS | 30.0% |
! | TACATCAACTTTGTTTGACT+GGG | - | chr4_3:58478068-58478087 | None:intergenic | 30.0% |
! | ATACATCAACTTTGTTTGAC+TGG | - | chr4_3:58478069-58478088 | None:intergenic | 30.0% |
AAATTATTAAATCAGGCCTC+TGG | + | chr4_3:58478238-58478257 | Msa0651130:intron | 30.0% | |
GTAACATACCAAAACATTCA+TGG | + | chr4_3:58478277-58478296 | Msa0651130:CDS | 30.0% | |
AAATTCCTTTACGGCAAAAG+CGG | + | chr4_3:58476353-58476372 | Msa0651130:CDS | 35.0% | |
! | TGGTAAAACTGATTCCACAA+AGG | + | chr4_3:58476419-58476438 | Msa0651130:CDS | 35.0% |
! | GCTATTTCCATAACCATTGA+TGG | + | chr4_3:58476558-58476577 | Msa0651130:CDS | 35.0% |
TCATCTAATTACCGTGTAAC+CGG | + | chr4_3:58476594-58476613 | Msa0651130:CDS | 35.0% | |
!! | TACCATTTTTACCGGTTACA+CGG | - | chr4_3:58476608-58476627 | None:intergenic | 35.0% |
TTGAAGTTTCAGCATGTTGA+CGG | + | chr4_3:58476633-58476652 | Msa0651130:CDS | 35.0% | |
! | CGAATTTTTACAATCCCACA+AGG | - | chr4_3:58476700-58476719 | None:intergenic | 35.0% |
GAGATAATTAGACATTACCG+TGG | - | chr4_3:58476748-58476767 | None:intergenic | 35.0% | |
! | TTGCACCTTATTTATTTGCC+TGG | + | chr4_3:58476797-58476816 | Msa0651130:intron | 35.0% |
TCAGACATAAGAATCAGAAG+AGG | + | chr4_3:58477098-58477117 | Msa0651130:intron | 35.0% | |
GTACAAAGCAAAAAGCAACT+TGG | - | chr4_3:58477264-58477283 | None:intergenic | 35.0% | |
ACTATTCATCGATGTCAAAC+CGG | - | chr4_3:58477418-58477437 | None:intergenic | 35.0% | |
! | CCCCTTGTGTATTTACATTT+TGG | - | chr4_3:58477470-58477489 | None:intergenic | 35.0% |
GGTGATGATTGTATCTCAAT+TGG | + | chr4_3:58477585-58477604 | Msa0651130:CDS | 35.0% | |
TCCACAAATTACTTGTACCA+GGG | - | chr4_3:58477611-58477630 | None:intergenic | 35.0% | |
ATCCACAAATTACTTGTACC+AGG | - | chr4_3:58477612-58477631 | None:intergenic | 35.0% | |
TGGATTGAAAACATTGCATG+TGG | + | chr4_3:58477627-58477646 | Msa0651130:CDS | 35.0% | |
GTTAAAACGGTTACATTCAC+AGG | + | chr4_3:58477854-58477873 | Msa0651130:CDS | 35.0% | |
ACATTCACAGGAACTCAAAA+TGG | + | chr4_3:58477866-58477885 | Msa0651130:CDS | 35.0% | |
GGTGTTAGAATAAAGTCTTG+GGG | + | chr4_3:58477887-58477906 | Msa0651130:CDS | 35.0% | |
TTCCTTACAAATCCATTGCT+AGG | - | chr4_3:58477917-58477936 | None:intergenic | 35.0% | |
! | CTTTTTCCAAGATGCAATCA+TGG | + | chr4_3:58477940-58477959 | Msa0651130:CDS | 35.0% |
CATTAACCATGATTGCATCT+TGG | - | chr4_3:58477949-58477968 | None:intergenic | 35.0% | |
! | GGTCAATTACAATTGGGTTT+TGG | - | chr4_3:58477973-58477992 | None:intergenic | 35.0% |
AATTATTGCCCAAACAACGA+AGG | + | chr4_3:58477995-58478014 | Msa0651130:CDS | 35.0% | |
TATGAAACCAATTACCTGAC+CGG | - | chr4_3:58478026-58478045 | None:intergenic | 35.0% | |
! | CAGATGTTCCATGAATGTTT+TGG | - | chr4_3:58478288-58478307 | None:intergenic | 35.0% |
TTCATCTTTATTCCACTGCA+CGG | - | chr4_3:58478352-58478371 | None:intergenic | 35.0% | |
AAATTCCTTTACGGCAAAAG+CGG | + | chr4_3:58476353-58476372 | Msa0651130:CDS | 35.0% | |
! | TGGTAAAACTGATTCCACAA+AGG | + | chr4_3:58476419-58476438 | Msa0651130:CDS | 35.0% |
! | GCTATTTCCATAACCATTGA+TGG | + | chr4_3:58476558-58476577 | Msa0651130:CDS | 35.0% |
TCATCTAATTACCGTGTAAC+CGG | + | chr4_3:58476594-58476613 | Msa0651130:CDS | 35.0% | |
!! | TACCATTTTTACCGGTTACA+CGG | - | chr4_3:58476608-58476627 | None:intergenic | 35.0% |
TTGAAGTTTCAGCATGTTGA+CGG | + | chr4_3:58476633-58476652 | Msa0651130:CDS | 35.0% | |
! | CGAATTTTTACAATCCCACA+AGG | - | chr4_3:58476700-58476719 | None:intergenic | 35.0% |
GAGATAATTAGACATTACCG+TGG | - | chr4_3:58476748-58476767 | None:intergenic | 35.0% | |
! | TTGCACCTTATTTATTTGCC+TGG | + | chr4_3:58476797-58476816 | Msa0651130:intron | 35.0% |
TCAGACATAAGAATCAGAAG+AGG | + | chr4_3:58477098-58477117 | Msa0651130:intron | 35.0% | |
GTACAAAGCAAAAAGCAACT+TGG | - | chr4_3:58477264-58477283 | None:intergenic | 35.0% | |
ACTATTCATCGATGTCAAAC+CGG | - | chr4_3:58477418-58477437 | None:intergenic | 35.0% | |
! | CCCCTTGTGTATTTACATTT+TGG | - | chr4_3:58477470-58477489 | None:intergenic | 35.0% |
GGTGATGATTGTATCTCAAT+TGG | + | chr4_3:58477585-58477604 | Msa0651130:CDS | 35.0% | |
TCCACAAATTACTTGTACCA+GGG | - | chr4_3:58477611-58477630 | None:intergenic | 35.0% | |
ATCCACAAATTACTTGTACC+AGG | - | chr4_3:58477612-58477631 | None:intergenic | 35.0% | |
TGGATTGAAAACATTGCATG+TGG | + | chr4_3:58477627-58477646 | Msa0651130:CDS | 35.0% | |
GTTAAAACGGTTACATTCAC+AGG | + | chr4_3:58477854-58477873 | Msa0651130:CDS | 35.0% | |
ACATTCACAGGAACTCAAAA+TGG | + | chr4_3:58477866-58477885 | Msa0651130:CDS | 35.0% | |
GGTGTTAGAATAAAGTCTTG+GGG | + | chr4_3:58477887-58477906 | Msa0651130:CDS | 35.0% | |
TTCCTTACAAATCCATTGCT+AGG | - | chr4_3:58477917-58477936 | None:intergenic | 35.0% | |
! | CTTTTTCCAAGATGCAATCA+TGG | + | chr4_3:58477940-58477959 | Msa0651130:CDS | 35.0% |
CATTAACCATGATTGCATCT+TGG | - | chr4_3:58477949-58477968 | None:intergenic | 35.0% | |
! | GGTCAATTACAATTGGGTTT+TGG | - | chr4_3:58477973-58477992 | None:intergenic | 35.0% |
AATTATTGCCCAAACAACGA+AGG | + | chr4_3:58477995-58478014 | Msa0651130:CDS | 35.0% | |
TATGAAACCAATTACCTGAC+CGG | - | chr4_3:58478026-58478045 | None:intergenic | 35.0% | |
! | CAGATGTTCCATGAATGTTT+TGG | - | chr4_3:58478288-58478307 | None:intergenic | 35.0% |
TTCATCTTTATTCCACTGCA+CGG | - | chr4_3:58478352-58478371 | None:intergenic | 35.0% | |
! | ATCAGTTTTACCATCTGGCT+TGG | - | chr4_3:58476412-58476431 | None:intergenic | 40.0% |
! | GTGGAATCAGTTTTACCATC+TGG | - | chr4_3:58476417-58476436 | None:intergenic | 40.0% |
CCAAGTAAGAATTTCCCTTG+TGG | - | chr4_3:58476504-58476523 | None:intergenic | 40.0% | |
CCACAAGGGAAATTCTTACT+TGG | + | chr4_3:58476501-58476520 | Msa0651130:CDS | 40.0% | |
CTTGGAACTGCAACATTTAG+TGG | + | chr4_3:58476519-58476538 | Msa0651130:CDS | 40.0% | |
! | CAAAGTGCCATCAATGGTTA+TGG | - | chr4_3:58476568-58476587 | None:intergenic | 40.0% |
! | CATAACCATTGATGGCACTT+TGG | + | chr4_3:58476566-58476585 | Msa0651130:CDS | 40.0% |
TACCGTGTAACCGGTAAAAA+TGG | + | chr4_3:58476603-58476622 | Msa0651130:CDS | 40.0% | |
TGAAGTTTCAGCATGTTGAC+GGG | + | chr4_3:58476634-58476653 | Msa0651130:CDS | 40.0% | |
GACAAAAGTAATTGCCCAAC+TGG | + | chr4_3:58476720-58476739 | Msa0651130:CDS | 40.0% | |
! | GAACAAGTTGGAGTTAACTC+AGG | + | chr4_3:58476839-58476858 | Msa0651130:intron | 40.0% |
GGGAGTAGGCAATGATATAA+TGG | + | chr4_3:58476896-58476915 | Msa0651130:intron | 40.0% | |
!! | AAGAAAAGAGGTGTTGACAG+TGG | + | chr4_3:58477325-58477344 | Msa0651130:intron | 40.0% |
ATGTTCCACATAGCGTTCAA+TGG | + | chr4_3:58477441-58477460 | Msa0651130:CDS | 40.0% | |
!!! | TCGAATTTTGGAGTTGAGGA+TGG | - | chr4_3:58477562-58477581 | None:intergenic | 40.0% |
CTCAACTCCAAAATTCGAAC+CGG | + | chr4_3:58477564-58477583 | Msa0651130:CDS | 40.0% | |
!!! | ATCATCACCGGTTCGAATTT+TGG | - | chr4_3:58477574-58477593 | None:intergenic | 40.0% |
TGAAAACATTGCATGTGGAC+CGG | + | chr4_3:58477632-58477651 | Msa0651130:CDS | 40.0% | |
AAGAACCTTATTCCATGTCC+CGG | - | chr4_3:58477654-58477673 | None:intergenic | 40.0% | |
! | TTGTTGCAGTATTGGAAGCT+TGG | + | chr4_3:58477793-58477812 | Msa0651130:intron | 40.0% |
! | TGTTGCAGTATTGGAAGCTT+GGG | + | chr4_3:58477794-58477813 | Msa0651130:intron | 40.0% |
GGATGGAAGTTAAATGAACC+AGG | + | chr4_3:58477815-58477834 | Msa0651130:CDS | 40.0% | |
! | ACTGTCACATTTTGTACTCC+TGG | - | chr4_3:58477836-58477855 | None:intergenic | 40.0% |
! | GACCTAGCAATGGATTTGTA+AGG | + | chr4_3:58477912-58477931 | Msa0651130:CDS | 40.0% |
CGTTGTTTGGGCAATAATTC+TGG | - | chr4_3:58477994-58478013 | None:intergenic | 40.0% | |
ATGAAACCAATTACCTGACC+GGG | - | chr4_3:58478025-58478044 | None:intergenic | 40.0% | |
! | AACTTTGTTTGACTGGGATG+AGG | - | chr4_3:58478062-58478081 | None:intergenic | 40.0% |
ACCACTCACTTTAATTCCAG+AGG | - | chr4_3:58478257-58478276 | None:intergenic | 40.0% | |
GTGCAGTGGAATAAAGATGA+AGG | + | chr4_3:58478351-58478370 | Msa0651130:CDS | 40.0% | |
! | ATCAGTTTTACCATCTGGCT+TGG | - | chr4_3:58476412-58476431 | None:intergenic | 40.0% |
! | GTGGAATCAGTTTTACCATC+TGG | - | chr4_3:58476417-58476436 | None:intergenic | 40.0% |
CCAAGTAAGAATTTCCCTTG+TGG | - | chr4_3:58476504-58476523 | None:intergenic | 40.0% | |
CCACAAGGGAAATTCTTACT+TGG | + | chr4_3:58476501-58476520 | Msa0651130:CDS | 40.0% | |
CTTGGAACTGCAACATTTAG+TGG | + | chr4_3:58476519-58476538 | Msa0651130:CDS | 40.0% | |
! | CAAAGTGCCATCAATGGTTA+TGG | - | chr4_3:58476568-58476587 | None:intergenic | 40.0% |
! | CATAACCATTGATGGCACTT+TGG | + | chr4_3:58476566-58476585 | Msa0651130:CDS | 40.0% |
TACCGTGTAACCGGTAAAAA+TGG | + | chr4_3:58476603-58476622 | Msa0651130:CDS | 40.0% | |
TGAAGTTTCAGCATGTTGAC+GGG | + | chr4_3:58476634-58476653 | Msa0651130:CDS | 40.0% | |
GACAAAAGTAATTGCCCAAC+TGG | + | chr4_3:58476720-58476739 | Msa0651130:CDS | 40.0% | |
! | GAACAAGTTGGAGTTAACTC+AGG | + | chr4_3:58476839-58476858 | Msa0651130:intron | 40.0% |
GGGAGTAGGCAATGATATAA+TGG | + | chr4_3:58476896-58476915 | Msa0651130:intron | 40.0% | |
!! | AAGAAAAGAGGTGTTGACAG+TGG | + | chr4_3:58477325-58477344 | Msa0651130:intron | 40.0% |
ATGTTCCACATAGCGTTCAA+TGG | + | chr4_3:58477441-58477460 | Msa0651130:CDS | 40.0% | |
!!! | TCGAATTTTGGAGTTGAGGA+TGG | - | chr4_3:58477562-58477581 | None:intergenic | 40.0% |
CTCAACTCCAAAATTCGAAC+CGG | + | chr4_3:58477564-58477583 | Msa0651130:CDS | 40.0% | |
!!! | ATCATCACCGGTTCGAATTT+TGG | - | chr4_3:58477574-58477593 | None:intergenic | 40.0% |
TGAAAACATTGCATGTGGAC+CGG | + | chr4_3:58477632-58477651 | Msa0651130:CDS | 40.0% | |
AAGAACCTTATTCCATGTCC+CGG | - | chr4_3:58477654-58477673 | None:intergenic | 40.0% | |
! | TTGTTGCAGTATTGGAAGCT+TGG | + | chr4_3:58477793-58477812 | Msa0651130:intron | 40.0% |
! | TGTTGCAGTATTGGAAGCTT+GGG | + | chr4_3:58477794-58477813 | Msa0651130:intron | 40.0% |
GGATGGAAGTTAAATGAACC+AGG | + | chr4_3:58477815-58477834 | Msa0651130:CDS | 40.0% | |
! | ACTGTCACATTTTGTACTCC+TGG | - | chr4_3:58477836-58477855 | None:intergenic | 40.0% |
! | GACCTAGCAATGGATTTGTA+AGG | + | chr4_3:58477912-58477931 | Msa0651130:CDS | 40.0% |
CGTTGTTTGGGCAATAATTC+TGG | - | chr4_3:58477994-58478013 | None:intergenic | 40.0% | |
ATGAAACCAATTACCTGACC+GGG | - | chr4_3:58478025-58478044 | None:intergenic | 40.0% | |
! | AACTTTGTTTGACTGGGATG+AGG | - | chr4_3:58478062-58478081 | None:intergenic | 40.0% |
ACCACTCACTTTAATTCCAG+AGG | - | chr4_3:58478257-58478276 | None:intergenic | 40.0% | |
GTGCAGTGGAATAAAGATGA+AGG | + | chr4_3:58478351-58478370 | Msa0651130:CDS | 40.0% | |
CGGCAATTTACGTACCACAA+GGG | + | chr4_3:58476487-58476506 | Msa0651130:CDS | 45.0% | |
! | AACCATTGATGGCACTTTGG+TGG | + | chr4_3:58476569-58476588 | Msa0651130:CDS | 45.0% |
GAAGTTTCAGCATGTTGACG+GGG | + | chr4_3:58476635-58476654 | Msa0651130:CDS | 45.0% | |
TCAACTGCTTGGTCTAGTTG+CGG | + | chr4_3:58476940-58476959 | Msa0651130:intron | 45.0% | |
GGGGTAAATATCATAGCAGC+CGG | + | chr4_3:58477486-58477505 | Msa0651130:CDS | 45.0% | |
!!! | CGGTTCGAATTTTGGAGTTG+AGG | - | chr4_3:58477566-58477585 | None:intergenic | 45.0% |
GATTGTATCTCAATTGGCCC+TGG | + | chr4_3:58477591-58477610 | Msa0651130:CDS | 45.0% | |
GCCCTGGTACAAGTAATTTG+TGG | + | chr4_3:58477607-58477626 | Msa0651130:CDS | 45.0% | |
GAAAACATTGCATGTGGACC+GGG | + | chr4_3:58477633-58477652 | Msa0651130:CDS | 45.0% | |
TGAAACCAATTACCTGACCG+GGG | - | chr4_3:58478024-58478043 | None:intergenic | 45.0% | |
!! | GCCTCTGGAATTAAAGTGAG+TGG | + | chr4_3:58478253-58478272 | Msa0651130:CDS | 45.0% |
TCATGGAACATCTGCAACAC+AGG | + | chr4_3:58478294-58478313 | Msa0651130:CDS | 45.0% | |
! | AGTTCAAAGTATCCGTGCAG+TGG | + | chr4_3:58478337-58478356 | Msa0651130:CDS | 45.0% |
! | GAAGCATCATGTAACCATGC+CGG | + | chr4_3:58478406-58478425 | Msa0651130:CDS | 45.0% |
CGGCAATTTACGTACCACAA+GGG | + | chr4_3:58476487-58476506 | Msa0651130:CDS | 45.0% | |
! | AACCATTGATGGCACTTTGG+TGG | + | chr4_3:58476569-58476588 | Msa0651130:CDS | 45.0% |
GAAGTTTCAGCATGTTGACG+GGG | + | chr4_3:58476635-58476654 | Msa0651130:CDS | 45.0% | |
TCAACTGCTTGGTCTAGTTG+CGG | + | chr4_3:58476940-58476959 | Msa0651130:intron | 45.0% | |
GGGGTAAATATCATAGCAGC+CGG | + | chr4_3:58477486-58477505 | Msa0651130:CDS | 45.0% | |
!!! | CGGTTCGAATTTTGGAGTTG+AGG | - | chr4_3:58477566-58477585 | None:intergenic | 45.0% |
GATTGTATCTCAATTGGCCC+TGG | + | chr4_3:58477591-58477610 | Msa0651130:CDS | 45.0% | |
GCCCTGGTACAAGTAATTTG+TGG | + | chr4_3:58477607-58477626 | Msa0651130:CDS | 45.0% | |
GAAAACATTGCATGTGGACC+GGG | + | chr4_3:58477633-58477652 | Msa0651130:CDS | 45.0% | |
TGAAACCAATTACCTGACCG+GGG | - | chr4_3:58478024-58478043 | None:intergenic | 45.0% | |
!! | GCCTCTGGAATTAAAGTGAG+TGG | + | chr4_3:58478253-58478272 | Msa0651130:CDS | 45.0% |
TCATGGAACATCTGCAACAC+AGG | + | chr4_3:58478294-58478313 | Msa0651130:CDS | 45.0% | |
! | AGTTCAAAGTATCCGTGCAG+TGG | + | chr4_3:58478337-58478356 | Msa0651130:CDS | 45.0% |
! | GAAGCATCATGTAACCATGC+CGG | + | chr4_3:58478406-58478425 | Msa0651130:CDS | 45.0% |
AACTATGGAGCCAAGCCAGA+TGG | + | chr4_3:58476399-58476418 | Msa0651130:CDS | 50.0% | |
ACGTAAATTGCCGCCGGATA+AGG | - | chr4_3:58476480-58476499 | None:intergenic | 50.0% | |
TGTGGTACGTAAATTGCCGC+CGG | - | chr4_3:58476486-58476505 | None:intergenic | 50.0% | |
GCGGCAATTTACGTACCACA+AGG | + | chr4_3:58476486-58476505 | Msa0651130:CDS | 50.0% | |
! | AGCCACCAAAGTGCCATCAA+TGG | - | chr4_3:58476574-58476593 | None:intergenic | 50.0% |
!! | ATGGACAAGGTACTGCCTTG+TGG | + | chr4_3:58476682-58476701 | Msa0651130:CDS | 50.0% |
!! | TGGACAAGGTACTGCCTTGT+GGG | + | chr4_3:58476683-58476702 | Msa0651130:CDS | 50.0% |
TAATTGCCCAACTGGAGCCA+CGG | + | chr4_3:58476728-58476747 | Msa0651130:CDS | 50.0% | |
ACATTACCGTGGCTCCAGTT+GGG | - | chr4_3:58476737-58476756 | None:intergenic | 50.0% | |
! | CTATGGTGGTTTTCAGACGC+TGG | + | chr4_3:58477362-58477381 | Msa0651130:intron | 50.0% |
GGCATCCATTGAACGCTATG+TGG | - | chr4_3:58477449-58477468 | None:intergenic | 50.0% | |
CATTTGGATGTGGATGCCGT+CGG | - | chr4_3:58477526-58477545 | None:intergenic | 50.0% | |
CTTGGGAGGACATTTGGATG+TGG | - | chr4_3:58477536-58477555 | None:intergenic | 50.0% | |
! | TGGTGACTTGGGAGGACATT+TGG | - | chr4_3:58477542-58477561 | None:intergenic | 50.0% |
GGAGTTGAGGATGGTGACTT+GGG | - | chr4_3:58477553-58477572 | None:intergenic | 50.0% | |
TGGAGTTGAGGATGGTGACT+TGG | - | chr4_3:58477554-58477573 | None:intergenic | 50.0% | |
! | GCAGTATTGGAAGCTTGGGA+TGG | + | chr4_3:58477798-58477817 | Msa0651130:intron | 50.0% |
TCTTGGGGTAGACCTAGCAA+TGG | + | chr4_3:58477902-58477921 | Msa0651130:CDS | 50.0% | |
AACTATGGAGCCAAGCCAGA+TGG | + | chr4_3:58476399-58476418 | Msa0651130:CDS | 50.0% | |
ACGTAAATTGCCGCCGGATA+AGG | - | chr4_3:58476480-58476499 | None:intergenic | 50.0% | |
TGTGGTACGTAAATTGCCGC+CGG | - | chr4_3:58476486-58476505 | None:intergenic | 50.0% | |
GCGGCAATTTACGTACCACA+AGG | + | chr4_3:58476486-58476505 | Msa0651130:CDS | 50.0% | |
! | AGCCACCAAAGTGCCATCAA+TGG | - | chr4_3:58476574-58476593 | None:intergenic | 50.0% |
!! | ATGGACAAGGTACTGCCTTG+TGG | + | chr4_3:58476682-58476701 | Msa0651130:CDS | 50.0% |
!! | TGGACAAGGTACTGCCTTGT+GGG | + | chr4_3:58476683-58476702 | Msa0651130:CDS | 50.0% |
TAATTGCCCAACTGGAGCCA+CGG | + | chr4_3:58476728-58476747 | Msa0651130:CDS | 50.0% | |
ACATTACCGTGGCTCCAGTT+GGG | - | chr4_3:58476737-58476756 | None:intergenic | 50.0% | |
! | CTATGGTGGTTTTCAGACGC+TGG | + | chr4_3:58477362-58477381 | Msa0651130:intron | 50.0% |
GGCATCCATTGAACGCTATG+TGG | - | chr4_3:58477449-58477468 | None:intergenic | 50.0% | |
CATTTGGATGTGGATGCCGT+CGG | - | chr4_3:58477526-58477545 | None:intergenic | 50.0% | |
CTTGGGAGGACATTTGGATG+TGG | - | chr4_3:58477536-58477555 | None:intergenic | 50.0% | |
! | TGGTGACTTGGGAGGACATT+TGG | - | chr4_3:58477542-58477561 | None:intergenic | 50.0% |
GGAGTTGAGGATGGTGACTT+GGG | - | chr4_3:58477553-58477572 | None:intergenic | 50.0% | |
TGGAGTTGAGGATGGTGACT+TGG | - | chr4_3:58477554-58477573 | None:intergenic | 50.0% | |
! | GCAGTATTGGAAGCTTGGGA+TGG | + | chr4_3:58477798-58477817 | Msa0651130:intron | 50.0% |
TCTTGGGGTAGACCTAGCAA+TGG | + | chr4_3:58477902-58477921 | Msa0651130:CDS | 50.0% | |
GGCATGTTCCTCGCCTTATC+CGG | + | chr4_3:58476464-58476483 | Msa0651130:CDS | 55.0% | |
ATGTTCCTCGCCTTATCCGG+CGG | + | chr4_3:58476467-58476486 | Msa0651130:CDS | 55.0% | |
GACATTACCGTGGCTCCAGT+TGG | - | chr4_3:58476738-58476757 | None:intergenic | 55.0% | |
! | GTCGGTGTTTGGGCTGTTTC+CGG | - | chr4_3:58477508-58477527 | None:intergenic | 55.0% |
GGAAACAGCCCAAACACCGA+CGG | + | chr4_3:58477507-58477526 | Msa0651130:CDS | 55.0% | |
! | TGTGGATGCCGTCGGTGTTT+GGG | - | chr4_3:58477518-58477537 | None:intergenic | 55.0% |
! | ATGTGGATGCCGTCGGTGTT+TGG | - | chr4_3:58477519-58477538 | None:intergenic | 55.0% |
! | GTTGAGGATGGTGACTTGGG+AGG | - | chr4_3:58477550-58477569 | None:intergenic | 55.0% |
ATTGCATGTGGACCGGGACA+TGG | + | chr4_3:58477639-58477658 | Msa0651130:CDS | 55.0% | |
GTGGACCGGGACATGGAATA+AGG | + | chr4_3:58477646-58477665 | Msa0651130:CDS | 55.0% | |
GCATCATGTAACCATGCCGG+TGG | + | chr4_3:58478409-58478428 | Msa0651130:CDS | 55.0% | |
TGAACCCAATGCAGCTCCAC+CGG | - | chr4_3:58478428-58478447 | None:intergenic | 55.0% | |
GGCATGTTCCTCGCCTTATC+CGG | + | chr4_3:58476464-58476483 | Msa0651130:CDS | 55.0% | |
ATGTTCCTCGCCTTATCCGG+CGG | + | chr4_3:58476467-58476486 | Msa0651130:CDS | 55.0% | |
GACATTACCGTGGCTCCAGT+TGG | - | chr4_3:58476738-58476757 | None:intergenic | 55.0% | |
! | GTCGGTGTTTGGGCTGTTTC+CGG | - | chr4_3:58477508-58477527 | None:intergenic | 55.0% |
GGAAACAGCCCAAACACCGA+CGG | + | chr4_3:58477507-58477526 | Msa0651130:CDS | 55.0% | |
! | TGTGGATGCCGTCGGTGTTT+GGG | - | chr4_3:58477518-58477537 | None:intergenic | 55.0% |
! | ATGTGGATGCCGTCGGTGTT+TGG | - | chr4_3:58477519-58477538 | None:intergenic | 55.0% |
! | GTTGAGGATGGTGACTTGGG+AGG | - | chr4_3:58477550-58477569 | None:intergenic | 55.0% |
ATTGCATGTGGACCGGGACA+TGG | + | chr4_3:58477639-58477658 | Msa0651130:CDS | 55.0% | |
GTGGACCGGGACATGGAATA+AGG | + | chr4_3:58477646-58477665 | Msa0651130:CDS | 55.0% | |
GCATCATGTAACCATGCCGG+TGG | + | chr4_3:58478409-58478428 | Msa0651130:CDS | 55.0% | |
TGAACCCAATGCAGCTCCAC+CGG | - | chr4_3:58478428-58478447 | None:intergenic | 55.0% | |
!!! | CGACGCCGCTTTTGCCGTAA+AGG | - | chr4_3:58476361-58476380 | None:intergenic | 60.0% |
AATTGCCGCCGGATAAGGCG+AGG | - | chr4_3:58476475-58476494 | None:intergenic | 60.0% | |
GTTGACGGGGTTTCGATCCG+CGG | + | chr4_3:58476648-58476667 | Msa0651130:CDS | 60.0% | |
! | GGCGGTGTGCTTGATGGACA+AGG | + | chr4_3:58476669-58476688 | Msa0651130:CDS | 60.0% |
CGGGGCAGCCTTCGTTGTTT+GGG | - | chr4_3:58478006-58478025 | None:intergenic | 60.0% | |
CCAAACAACGAAGGCTGCCC+CGG | + | chr4_3:58478004-58478023 | Msa0651130:CDS | 60.0% | |
CATGCCGGTGGAGCTGCATT+GGG | + | chr4_3:58478421-58478440 | Msa0651130:CDS | 60.0% | |
!!! | CGACGCCGCTTTTGCCGTAA+AGG | - | chr4_3:58476361-58476380 | None:intergenic | 60.0% |
AATTGCCGCCGGATAAGGCG+AGG | - | chr4_3:58476475-58476494 | None:intergenic | 60.0% | |
GTTGACGGGGTTTCGATCCG+CGG | + | chr4_3:58476648-58476667 | Msa0651130:CDS | 60.0% | |
! | GGCGGTGTGCTTGATGGACA+AGG | + | chr4_3:58476669-58476688 | Msa0651130:CDS | 60.0% |
CGGGGCAGCCTTCGTTGTTT+GGG | - | chr4_3:58478006-58478025 | None:intergenic | 60.0% | |
CCAAACAACGAAGGCTGCCC+CGG | + | chr4_3:58478004-58478023 | Msa0651130:CDS | 60.0% | |
CATGCCGGTGGAGCTGCATT+GGG | + | chr4_3:58478421-58478440 | Msa0651130:CDS | 60.0% | |
ATCCGCGGCGGTGTGCTTGA+TGG | + | chr4_3:58476663-58476682 | Msa0651130:CDS | 65.0% | |
GTCCATCAAGCACACCGCCG+CGG | - | chr4_3:58476668-58476687 | None:intergenic | 65.0% | |
CCGGGGCAGCCTTCGTTGTT+TGG | - | chr4_3:58478007-58478026 | None:intergenic | 65.0% | |
GGCTGCCCCGGTCAGGTAAT+TGG | + | chr4_3:58478016-58478035 | Msa0651130:intron | 65.0% | |
CCAATGCAGCTCCACCGGCA+TGG | - | chr4_3:58478423-58478442 | None:intergenic | 65.0% | |
CCATGCCGGTGGAGCTGCAT+TGG | + | chr4_3:58478420-58478439 | Msa0651130:CDS | 65.0% | |
ATCCGCGGCGGTGTGCTTGA+TGG | + | chr4_3:58476663-58476682 | Msa0651130:CDS | 65.0% | |
GTCCATCAAGCACACCGCCG+CGG | - | chr4_3:58476668-58476687 | None:intergenic | 65.0% | |
CCGGGGCAGCCTTCGTTGTT+TGG | - | chr4_3:58478007-58478026 | None:intergenic | 65.0% | |
GGCTGCCCCGGTCAGGTAAT+TGG | + | chr4_3:58478016-58478035 | Msa0651130:intron | 65.0% | |
CCAATGCAGCTCCACCGGCA+TGG | - | chr4_3:58478423-58478442 | None:intergenic | 65.0% | |
CCATGCCGGTGGAGCTGCAT+TGG | + | chr4_3:58478420-58478439 | Msa0651130:CDS | 65.0% | |
GACGGGGTTTCGATCCGCGG+CGG | + | chr4_3:58476651-58476670 | Msa0651130:CDS | 70.0% | |
CAACGAAGGCTGCCCCGGTC+AGG | + | chr4_3:58478009-58478028 | Msa0651130:CDS | 70.0% | |
GACGGGGTTTCGATCCGCGG+CGG | + | chr4_3:58476651-58476670 | Msa0651130:CDS | 70.0% | |
CAACGAAGGCTGCCCCGGTC+AGG | + | chr4_3:58478009-58478028 | Msa0651130:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 58476291 | 58478471 | 58476291 | ID=Msa0651130;Name=Msa0651130 |
chr4_3 | mRNA | 58476291 | 58478471 | 58476291 | ID=Msa0651130-mRNA-1;Parent=Msa0651130;Name=Msa0651130-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|0.33|0|1|1|1|4|0|398 |
chr4_3 | exon | 58476291 | 58476749 | 58476291 | ID=Msa0651130-mRNA-1:exon:15460;Parent=Msa0651130-mRNA-1 |
chr4_3 | exon | 58477378 | 58477667 | 58477378 | ID=Msa0651130-mRNA-1:exon:15461;Parent=Msa0651130-mRNA-1 |
chr4_3 | exon | 58477802 | 58478030 | 58477802 | ID=Msa0651130-mRNA-1:exon:15462;Parent=Msa0651130-mRNA-1 |
chr4_3 | exon | 58478253 | 58478471 | 58478253 | ID=Msa0651130-mRNA-1:exon:15463;Parent=Msa0651130-mRNA-1 |
chr4_3 | CDS | 58476291 | 58476749 | 58476291 | ID=Msa0651130-mRNA-1:cds;Parent=Msa0651130-mRNA-1 |
chr4_3 | CDS | 58477378 | 58477667 | 58477378 | ID=Msa0651130-mRNA-1:cds;Parent=Msa0651130-mRNA-1 |
chr4_3 | CDS | 58477802 | 58478030 | 58477802 | ID=Msa0651130-mRNA-1:cds;Parent=Msa0651130-mRNA-1 |
chr4_3 | CDS | 58478253 | 58478471 | 58478253 | ID=Msa0651130-mRNA-1:cds;Parent=Msa0651130-mRNA-1 |
Gene Sequence |
Protein sequence |