Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0642920 | XP_003606369.2 | 96.902 | 936 | 17 | 1 | 1 | 924 | 1 | 936 | 0.0 | 1888 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0642920 | G7JND6 | 96.902 | 936 | 17 | 1 | 1 | 924 | 1 | 936 | 0.0 | 1888 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0642920 | -0.805126 | 1.551482e-49 | -8.615850e-47 |
| Msa0026420 | Msa0642920 | 0.807993 | 3.853677e-50 | -8.615850e-47 |
| Msa0027020 | Msa0642920 | -0.846342 | 2.307341e-59 | -8.615850e-47 |
| Msa0033190 | Msa0642920 | -0.803655 | 3.143051e-49 | -8.615850e-47 |
| Msa0037280 | Msa0642920 | 0.810507 | 1.113963e-50 | -8.615850e-47 |
| Msa0039890 | Msa0642920 | 0.867454 | 1.352637e-65 | -8.615850e-47 |
| Msa0042520 | Msa0642920 | -0.829099 | 6.220113e-55 | -8.615850e-47 |
| Msa0046020 | Msa0642920 | -0.815608 | 8.473125e-52 | -8.615850e-47 |
| Msa0052780 | Msa0642920 | 0.827711 | 1.345275e-54 | -8.615850e-47 |
| Msa0069150 | Msa0642920 | -0.804258 | 2.355173e-49 | -8.615850e-47 |
| Msa0074860 | Msa0642920 | -0.837096 | 6.358017e-57 | -8.615850e-47 |
| Msa0075990 | Msa0642920 | -0.808686 | 2.741258e-50 | -8.615850e-47 |
| Msa0079840 | Msa0642920 | -0.806059 | 9.885769e-50 | -8.615850e-47 |
| Msa0087550 | Msa0642920 | 0.890760 | 7.360160e-74 | -8.615850e-47 |
| Msa0093360 | Msa0642920 | -0.809874 | 1.524766e-50 | -8.615850e-47 |
| Msa0097570 | Msa0642920 | 0.822863 | 1.886241e-53 | -8.615850e-47 |
| Msa0603310 | Msa0642920 | 0.803823 | 2.899795e-49 | -8.615850e-47 |
| Msa0605150 | Msa0642920 | -0.803655 | 3.143232e-49 | -8.615850e-47 |
| Msa0606340 | Msa0642920 | -0.816160 | 6.381294e-52 | -8.615850e-47 |
| Msa0608720 | Msa0642920 | -0.801686 | 8.009064e-49 | -8.615850e-47 |
| Msa0614290 | Msa0642920 | 0.828551 | 8.441532e-55 | -8.615850e-47 |
| Msa0615070 | Msa0642920 | 0.824912 | 6.240508e-54 | -8.615850e-47 |
| Msa0616890 | Msa0642920 | -0.805432 | 1.338850e-49 | -8.615850e-47 |
| Msa0638810 | Msa0642920 | 0.811195 | 7.902945e-51 | -8.615850e-47 |
| Msa0638820 | Msa0642920 | 0.812647 | 3.815229e-51 | -8.615850e-47 |
| Msa0639530 | Msa0642920 | -0.813691 | 2.251931e-51 | -8.615850e-47 |
| Msa0642920 | Msa0644340 | 0.803694 | 3.084259e-49 | -8.615850e-47 |
| Msa0642920 | Msa0651130 | 0.804830 | 1.789511e-49 | -8.615850e-47 |
| Msa0642920 | Msa0657340 | 0.831015 | 2.120896e-55 | -8.615850e-47 |
| Msa0642920 | Msa0660650 | 0.815258 | 1.013854e-51 | -8.615850e-47 |
| Msa0642920 | Msa0661540 | -0.803242 | 3.827799e-49 | -8.615850e-47 |
| Msa0642920 | Msa0662210 | 0.812694 | 3.727264e-51 | -8.615850e-47 |
| Msa0642920 | Msa0667670 | -0.831345 | 1.760051e-55 | -8.615850e-47 |
| Msa0642920 | Msa0672980 | 0.800975 | 1.119911e-48 | -8.615850e-47 |
| Msa0642920 | Msa0690100 | -0.816415 | 5.596204e-52 | -8.615850e-47 |
| Msa0642920 | Msa0693140 | 0.816212 | 6.211292e-52 | -8.615850e-47 |
| Msa0642920 | Msa0693750 | 0.815518 | 8.873979e-52 | -8.615850e-47 |
| Msa0642920 | Msa0695250 | -0.828385 | 9.260821e-55 | -8.615850e-47 |
| Msa0642920 | Msa0697510 | 0.832276 | 1.036586e-55 | -8.615850e-47 |
| Msa0642920 | Msa0697520 | 0.815729 | 7.962787e-52 | -8.615850e-47 |
| Msa0642920 | Msa0698110 | 0.814545 | 1.458563e-51 | -8.615850e-47 |
| Msa0642920 | Msa0701430 | 0.809677 | 1.680985e-50 | -8.615850e-47 |
| Msa0642920 | Msa0713060 | 0.805500 | 1.295724e-49 | -8.615850e-47 |
| Msa0642920 | Msa0713570 | -0.813246 | 2.820729e-51 | -8.615850e-47 |
| Msa0642920 | Msa0744550 | 0.814067 | 1.860391e-51 | -8.615850e-47 |
| Msa0642920 | Msa0744560 | 0.809748 | 1.622905e-50 | -8.615850e-47 |
| Msa0642920 | Msa0744640 | 0.800287 | 1.547213e-48 | -8.615850e-47 |
| Msa0642920 | Msa0755550 | -0.810285 | 1.243863e-50 | -8.615850e-47 |
| Msa0642920 | Msa0788450 | -0.811002 | 8.702374e-51 | -8.615850e-47 |
| Msa0642920 | Msa0793130 | -0.814405 | 1.566995e-51 | -8.615850e-47 |
| Msa0642920 | Msa0793270 | 0.816766 | 4.669797e-52 | -8.615850e-47 |
| Msa0642920 | Msa0794900 | -0.807057 | 6.086744e-50 | -8.615850e-47 |
| Msa0642920 | Msa0795320 | 0.824774 | 6.725807e-54 | -8.615850e-47 |
| Msa0642920 | Msa0797180 | -0.800774 | 1.230879e-48 | -8.615850e-47 |
| Msa0642920 | Msa0816630 | 0.846760 | 1.774317e-59 | -8.615850e-47 |
| Msa0642920 | Msa0820130 | -0.810695 | 1.014180e-50 | -8.615850e-47 |
| Msa0642920 | Msa0825570 | -0.810745 | 9.894072e-51 | -8.615850e-47 |
| Msa0642920 | Msa0826450 | 0.801052 | 1.080192e-48 | -8.615850e-47 |
| Msa0642920 | Msa0826540 | -0.811371 | 7.240123e-51 | -8.615850e-47 |
| Msa0642920 | Msa0826820 | -0.811196 | 7.900242e-51 | -8.615850e-47 |
| Msa0642920 | Msa0829210 | -0.805125 | 1.552539e-49 | -8.615850e-47 |
| Msa0642920 | Msa0829250 | -0.810973 | 8.830563e-51 | -8.615850e-47 |
| Msa0642920 | Msa0835050 | -0.811998 | 5.288491e-51 | -8.615850e-47 |
| Msa0642920 | Msa0860630 | -0.800438 | 1.441033e-48 | -8.615850e-47 |
| Msa0642920 | Msa0863940 | 0.840915 | 6.521363e-58 | -8.615850e-47 |
| Msa0642920 | Msa0865500 | -0.801497 | 8.757743e-49 | -8.615850e-47 |
| Msa0642920 | Msa0865830 | 0.802575 | 5.256558e-49 | -8.615850e-47 |
| Msa0642920 | Msa0873910 | 0.812482 | 4.147537e-51 | -8.615850e-47 |
| Msa0642920 | Msa0888520 | -0.812148 | 4.903864e-51 | -8.615850e-47 |
| Msa0642920 | Msa0921790 | 0.820418 | 6.932227e-53 | -8.615850e-47 |
| Msa0642920 | Msa0945160 | -0.822525 | 2.261449e-53 | -8.615850e-47 |
| Msa0642920 | Msa0947550 | -0.801187 | 1.013490e-48 | -8.615850e-47 |
| Msa0642920 | Msa0958960 | -0.801801 | 7.584016e-49 | -8.615850e-47 |
| Msa0642920 | Msa0971780 | -0.801146 | 1.033151e-48 | -8.615850e-47 |
| Msa0642920 | Msa0975950 | 0.802976 | 4.345244e-49 | -8.615850e-47 |
| Msa0642920 | Msa0975960 | 0.814441 | 1.538183e-51 | -8.615850e-47 |
| Msa0642920 | Msa0984230 | -0.818934 | 1.512764e-52 | -8.615850e-47 |
| Msa0642920 | Msa0984290 | 0.821365 | 4.196226e-53 | -8.615850e-47 |
| Msa0642920 | Msa1002550 | -0.809418 | 1.911033e-50 | -8.615850e-47 |
| Msa0642920 | Msa1016580 | -0.807802 | 4.230977e-50 | -8.615850e-47 |
| Msa0642920 | Msa1026890 | 0.814781 | 1.293695e-51 | -8.615850e-47 |
| Msa0642920 | Msa1028660 | 0.811842 | 5.717934e-51 | -8.615850e-47 |
| Msa0642920 | Msa1030210 | 0.810213 | 1.289119e-50 | -8.615850e-47 |
| Msa0642920 | Msa1031190 | -0.800054 | 1.725493e-48 | -8.615850e-47 |
| Msa0642920 | Msa1031780 | 0.803550 | 3.303845e-49 | -8.615850e-47 |
| Msa0642920 | Msa1037360 | 0.803626 | 3.186927e-49 | -8.615850e-47 |
| Msa0642920 | Msa1041570 | -0.803904 | 2.790509e-49 | -8.615850e-47 |
| Msa0642920 | Msa1062060 | 0.800035 | 1.741031e-48 | -8.615850e-47 |
| Msa0642920 | Msa1064240 | 0.821055 | 4.948257e-53 | -8.615850e-47 |
| Msa0642920 | Msa1066770 | 0.809092 | 2.245074e-50 | -8.615850e-47 |
| Msa0642920 | Msa1067000 | 0.816308 | 5.913583e-52 | -8.615850e-47 |
| Msa0642920 | Msa1075090 | 0.817385 | 3.389228e-52 | -8.615850e-47 |
| Msa0642920 | Msa1080820 | 0.818841 | 1.587955e-52 | -8.615850e-47 |
| Msa0642920 | Msa1092770 | -0.811594 | 6.475647e-51 | -8.615850e-47 |
| Msa0642920 | Msa1102410 | -0.811166 | 8.021545e-51 | -8.615850e-47 |
| Msa0642920 | Msa1111860 | 0.832985 | 6.914554e-56 | -8.615850e-47 |
| Msa0642920 | Msa1112190 | 0.812055 | 5.138416e-51 | -8.615850e-47 |
| Msa0642920 | Msa1117770 | -0.819472 | 1.141025e-52 | -8.615850e-47 |
| Msa0642920 | Msa1118960 | 0.817711 | 2.861523e-52 | -8.615850e-47 |
| Msa0642920 | Msa1119420 | -0.800736 | 1.253198e-48 | -8.615850e-47 |
| Msa0642920 | Msa1121300 | 0.805228 | 1.477052e-49 | -8.615850e-47 |
| Msa0642920 | Msa1121720 | -0.833680 | 4.640948e-56 | -8.615850e-47 |
| Msa0642920 | Msa1130150 | -0.821546 | 3.812837e-53 | -8.615850e-47 |
| Msa0642920 | Msa1130850 | -0.812943 | 3.287835e-51 | -8.615850e-47 |
| Msa0642920 | Msa1130910 | -0.805641 | 1.210259e-49 | -8.615850e-47 |
| Msa0642920 | Msa1154240 | 0.835311 | 1.806175e-56 | -8.615850e-47 |
| Msa0642920 | Msa1156120 | -0.813317 | 2.720728e-51 | -8.615850e-47 |
| Msa0642920 | Msa1164230 | 0.801333 | 9.461452e-49 | -8.615850e-47 |
| Msa0642920 | Msa1166470 | -0.807279 | 5.462085e-50 | -8.615850e-47 |
| Msa0642920 | Msa1173150 | 0.822551 | 2.229918e-53 | -8.615850e-47 |
| Msa0642920 | Msa1174280 | 0.827963 | 1.170362e-54 | -8.615850e-47 |
| Msa0642920 | Msa1175340 | -0.805856 | 1.090515e-49 | -8.615850e-47 |
| Msa0642920 | Msa1177650 | 0.823050 | 1.706506e-53 | -8.615850e-47 |
| Msa0642920 | Msa1184100 | -0.813808 | 2.121919e-51 | -8.615850e-47 |
| Msa0642920 | Msa1185270 | 0.826531 | 2.577574e-54 | -8.615850e-47 |
| Msa0642920 | Msa1199870 | 0.803859 | 2.851107e-49 | -8.615850e-47 |
| Msa0642920 | Msa1202110 | 0.824333 | 8.545045e-54 | -8.615850e-47 |
| Msa0642920 | Msa1202470 | 0.804017 | 2.643344e-49 | -8.615850e-47 |
| Msa0642920 | Msa1203810 | 0.800797 | 1.217459e-48 | -8.615850e-47 |
| Msa0642920 | Msa1211610 | 0.818604 | 1.797296e-52 | -8.615850e-47 |
| Msa0642920 | Msa1212150 | -0.813616 | 2.339420e-51 | -8.615850e-47 |
| Msa0642920 | Msa1217260 | 0.862856 | 3.768566e-64 | -8.615850e-47 |
| Msa0642920 | Msa1221220 | 0.813533 | 2.439638e-51 | -8.615850e-47 |
| Msa0642920 | Msa1228260 | -0.829942 | 3.880417e-55 | -8.615850e-47 |
| Msa0642920 | Msa1235620 | -0.801694 | 7.977663e-49 | -8.615850e-47 |
| Msa0642920 | Msa1236120 | -0.824598 | 7.402881e-54 | -8.615850e-47 |
| Msa0642920 | Msa1236190 | -0.830986 | 2.156227e-55 | -8.615850e-47 |
| Msa0642920 | Msa1239190 | 0.815306 | 9.891585e-52 | -8.615850e-47 |
| Msa0642920 | Msa1239210 | 0.835729 | 1.416675e-56 | -8.615850e-47 |
| Msa0642920 | Msa1241770 | 0.819887 | 9.169829e-53 | -8.615850e-47 |
| Msa0642920 | Msa1252810 | 0.802612 | 5.164355e-49 | -8.615850e-47 |
| Msa0642920 | Msa1254870 | 0.825609 | 4.270543e-54 | -8.615850e-47 |
| Msa0642920 | Msa1254910 | 0.802714 | 4.920715e-49 | -8.615850e-47 |
| Msa0642920 | Msa1262540 | 0.842822 | 2.044186e-58 | -8.615850e-47 |
| Msa0642920 | Msa1271220 | -0.831320 | 1.784361e-55 | -8.615850e-47 |
| Msa0642920 | Msa1277270 | -0.816049 | 6.755892e-52 | -8.615850e-47 |
| Msa0642920 | Msa1279060 | 0.857543 | 1.519815e-62 | -8.615850e-47 |
| Msa0642920 | Msa1299480 | 0.815944 | 7.131537e-52 | -8.615850e-47 |
| Msa0642920 | Msa1302340 | 0.816948 | 4.248964e-52 | -8.615850e-47 |
| Msa0642920 | Msa1303620 | -0.813121 | 3.004543e-51 | -8.615850e-47 |
| Msa0642920 | Msa1303690 | -0.800411 | 1.459721e-48 | -8.615850e-47 |
| Msa0642920 | Msa1308430 | -0.831493 | 1.617750e-55 | -8.615850e-47 |
| Msa0642920 | Msa1315880 | -0.828086 | 1.092834e-54 | -8.615850e-47 |
| Msa0642920 | Msa1317740 | 0.810073 | 1.381438e-50 | -8.615850e-47 |
| Msa0642920 | Msa1328430 | 0.826339 | 2.864665e-54 | -8.615850e-47 |
| Msa0642920 | Msa1330400 | 0.803198 | 3.908461e-49 | -8.615850e-47 |
| Msa0642920 | Msa1340440 | 0.807703 | 4.441111e-50 | -8.615850e-47 |
| Msa0642920 | Msa1341710 | -0.822066 | 2.888982e-53 | -8.615850e-47 |
| Msa0642920 | Msa1341850 | -0.828644 | 8.015041e-55 | -8.615850e-47 |
| Msa0642920 | Msa1348180 | -0.801864 | 7.363316e-49 | -8.615850e-47 |
| Msa0642920 | Msa1349830 | 0.814921 | 1.204318e-51 | -8.615850e-47 |
| Msa0642920 | Msa1350590 | -0.841126 | 5.741883e-58 | -8.615850e-47 |
| Msa0642920 | Msa1356100 | -0.833536 | 5.041674e-56 | -8.615850e-47 |
| Msa0642920 | Msa1357570 | 0.830337 | 3.108219e-55 | -8.615850e-47 |
| Msa0642920 | Msa1371540 | -0.809975 | 1.450532e-50 | -8.615850e-47 |
| Msa0642920 | Msa1372460 | -0.832738 | 7.965437e-56 | -8.615850e-47 |
| Msa0642920 | Msa1373310 | -0.800969 | 1.123221e-48 | -8.615850e-47 |
| Msa0642920 | Msa1373420 | -0.816382 | 5.692598e-52 | -8.615850e-47 |
| Msa0642920 | Msa1377980 | -0.818763 | 1.654156e-52 | -8.615850e-47 |
| Msa0642920 | Msa1379020 | 0.814715 | 1.337705e-51 | -8.615850e-47 |
| Msa0642920 | Msa1386910 | -0.815031 | 1.138740e-51 | -8.615850e-47 |
| Msa0642920 | Msa1388690 | 0.829976 | 3.807369e-55 | -8.615850e-47 |
| Msa0642920 | Msa1395380 | -0.822676 | 2.085020e-53 | -8.615850e-47 |
| Msa0642920 | Msa1398120 | 0.812876 | 3.399951e-51 | -8.615850e-47 |
| Msa0642920 | Msa1398320 | 0.819194 | 1.319948e-52 | -8.615850e-47 |
| Msa0642920 | Msa1403690 | 0.824190 | 9.229080e-54 | -8.615850e-47 |
| Msa0642920 | Msa1408230 | -0.826677 | 2.378931e-54 | -8.615850e-47 |
| Msa0642920 | Msa1408280 | -0.820012 | 8.586719e-53 | -8.615850e-47 |
| Msa0642920 | Msa1410480 | -0.818151 | 2.276385e-52 | -8.615850e-47 |
| Msa0642920 | Msa1410500 | -0.824293 | 8.732112e-54 | -8.615850e-47 |
| Msa0642920 | Msa1411370 | 0.810163 | 1.321638e-50 | -8.615850e-47 |
| Msa0642920 | Msa1412410 | 0.813728 | 2.210402e-51 | -8.615850e-47 |
| Msa0642920 | Msa1415510 | -0.824899 | 6.283800e-54 | -8.615850e-47 |
| Msa0642920 | Msa1423560 | -0.810054 | 1.394526e-50 | -8.615850e-47 |
| Msa0642920 | Msa1424490 | -0.824012 | 1.016506e-53 | -8.615850e-47 |
| Msa0642920 | Msa1427860 | 0.817602 | 3.028489e-52 | -8.615850e-47 |
| Msa0642920 | Msa1434860 | -0.835336 | 1.780912e-56 | -8.615850e-47 |
| Msa0642920 | Msa1435320 | 0.833795 | 4.343859e-56 | -8.615850e-47 |
| Msa0642920 | Msa1439860 | 0.808080 | 3.691711e-50 | -8.615850e-47 |
| Msa0642920 | Msa1443400 | 0.833740 | 4.484186e-56 | -8.615850e-47 |
| Msa0642920 | Msa1444130 | -0.815626 | 8.395930e-52 | -8.615850e-47 |
| Msa0642920 | Msa1444690 | -0.816179 | 6.318816e-52 | -8.615850e-47 |
| Msa0642920 | Msa1448040 | 0.834077 | 3.692432e-56 | -8.615850e-47 |
| Msa0642920 | Msa1453600 | 0.800603 | 1.333711e-48 | -8.615850e-47 |
| Msa0642920 | Msa1454300 | -0.822438 | 2.368808e-53 | -8.615850e-47 |
| Msa0642920 | Msa1459680 | -0.806560 | 7.752605e-50 | -8.615850e-47 |
| Msa0642920 | Msa1459920 | 0.810163 | 1.321638e-50 | -8.615850e-47 |
| Msa0642920 | Msa1461840 | -0.818042 | 2.409187e-52 | -8.615850e-47 |
| Msa0642920 | Msa1465860 | 0.805006 | 1.644108e-49 | -8.615850e-47 |
| Msa0127220 | Msa0642920 | -0.803681 | 3.104775e-49 | -8.615850e-47 |
| Msa0127350 | Msa0642920 | -0.808624 | 2.826793e-50 | -8.615850e-47 |
| Msa0127910 | Msa0642920 | -0.814629 | 1.397755e-51 | -8.615850e-47 |
| Msa0129640 | Msa0642920 | 0.811901 | 5.551825e-51 | -8.615850e-47 |
| Msa0134270 | Msa0642920 | 0.892028 | 2.314503e-74 | -8.615850e-47 |
| Msa0141410 | Msa0642920 | 0.818758 | 1.658291e-52 | -8.615850e-47 |
| Msa0143640 | Msa0642920 | 0.818735 | 1.678464e-52 | -8.615850e-47 |
| Msa0150620 | Msa0642920 | 0.806772 | 6.992712e-50 | -8.615850e-47 |
| Msa0159240 | Msa0642920 | -0.823629 | 1.249961e-53 | -8.615850e-47 |
| Msa0167160 | Msa0642920 | -0.848458 | 6.052480e-60 | -8.615850e-47 |
| Msa0168770 | Msa0642920 | -0.812800 | 3.533338e-51 | -8.615850e-47 |
| Msa0172310 | Msa0642920 | -0.802395 | 5.725542e-49 | -8.615850e-47 |
| Msa0174100 | Msa0642920 | 0.802208 | 6.255562e-49 | -8.615850e-47 |
| Msa0180820 | Msa0642920 | 0.866244 | 3.286381e-65 | -8.615850e-47 |
| Msa0186240 | Msa0642920 | 0.806008 | 1.013549e-49 | -8.615850e-47 |
| Msa0195810 | Msa0642920 | -0.803238 | 3.834782e-49 | -8.615850e-47 |
| Msa0216150 | Msa0642920 | -0.800341 | 1.508571e-48 | -8.615850e-47 |
| Msa0224210 | Msa0642920 | 0.808479 | 3.035523e-50 | -8.615850e-47 |
| Msa0225280 | Msa0642920 | -0.822284 | 2.572440e-53 | -8.615850e-47 |
| Msa0232160 | Msa0642920 | -0.813447 | 2.547503e-51 | -8.615850e-47 |
| Msa0366810 | Msa0642920 | 0.811929 | 5.473539e-51 | -8.615850e-47 |
| Msa0368620 | Msa0642920 | 0.810737 | 9.931799e-51 | -8.615850e-47 |
| Msa0369990 | Msa0642920 | 0.805072 | 1.592380e-49 | -8.615850e-47 |
| Msa0378320 | Msa0642920 | 0.809879 | 1.520990e-50 | -8.615850e-47 |
| Msa0380470 | Msa0642920 | -0.801858 | 7.384664e-49 | -8.615850e-47 |
| Msa0382020 | Msa0642920 | -0.803172 | 3.957373e-49 | -8.615850e-47 |
| Msa0387630 | Msa0642920 | -0.801001 | 1.106304e-48 | -8.615850e-47 |
| Msa0389710 | Msa0642920 | 0.806081 | 9.781420e-50 | -8.615850e-47 |
| Msa0390590 | Msa0642920 | -0.815983 | 6.990080e-52 | -8.615850e-47 |
| Msa0390790 | Msa0642920 | 0.809323 | 2.002518e-50 | -8.615850e-47 |
| Msa0393100 | Msa0642920 | 0.817622 | 2.997865e-52 | -8.615850e-47 |
| Msa0402800 | Msa0642920 | 0.832299 | 1.023009e-55 | -8.615850e-47 |
| Msa0403740 | Msa0642920 | -0.801904 | 7.224149e-49 | -8.615850e-47 |
| Msa0405200 | Msa0642920 | 0.814324 | 1.632371e-51 | -8.615850e-47 |
| Msa0415760 | Msa0642920 | -0.822026 | 2.951425e-53 | -8.615850e-47 |
| Msa0417860 | Msa0642920 | 0.806764 | 7.020725e-50 | -8.615850e-47 |
| Msa0419150 | Msa0642920 | -0.815410 | 9.376085e-52 | -8.615850e-47 |
| Msa0427230 | Msa0642920 | -0.818562 | 1.837721e-52 | -8.615850e-47 |
| Msa0427310 | Msa0642920 | 0.809271 | 2.054887e-50 | -8.615850e-47 |
| Msa0427560 | Msa0642920 | 0.809917 | 1.492556e-50 | -8.615850e-47 |
| Msa0427660 | Msa0642920 | 0.804439 | 2.158875e-49 | -8.615850e-47 |
| Msa0428720 | Msa0642920 | -0.808354 | 3.228298e-50 | -8.615850e-47 |
| Msa0429840 | Msa0642920 | 0.817248 | 3.638950e-52 | -8.615850e-47 |
| Msa0431270 | Msa0642920 | -0.808932 | 2.428529e-50 | -8.615850e-47 |
| Msa0434830 | Msa0642920 | -0.805739 | 1.154170e-49 | -8.615850e-47 |
| Msa0437820 | Msa0642920 | -0.814189 | 1.748504e-51 | -8.615850e-47 |
| Msa0444770 | Msa0642920 | -0.802051 | 6.738581e-49 | -8.615850e-47 |
| Msa0449490 | Msa0642920 | 0.801865 | 7.358012e-49 | -8.615850e-47 |
| Msa0449500 | Msa0642920 | 0.812733 | 3.653395e-51 | -8.615850e-47 |
| Msa0449620 | Msa0642920 | 0.806831 | 6.793893e-50 | -8.615850e-47 |
| Msa0450920 | Msa0642920 | -0.803010 | 4.275063e-49 | -8.615850e-47 |
| Msa0457600 | Msa0642920 | -0.803153 | 3.993589e-49 | -8.615850e-47 |
| Msa0459150 | Msa0642920 | 0.806444 | 8.203768e-50 | -8.615850e-47 |
| Msa0460510 | Msa0642920 | -0.817340 | 3.469381e-52 | -8.615850e-47 |
| Msa0463030 | Msa0642920 | -0.803381 | 3.582408e-49 | -8.615850e-47 |
| Msa0464360 | Msa0642920 | 0.823665 | 1.225551e-53 | -8.615850e-47 |
| Msa0464980 | Msa0642920 | -0.815287 | 9.988869e-52 | -8.615850e-47 |
| Msa0473740 | Msa0642920 | -0.820437 | 6.863844e-53 | -8.615850e-47 |
| Msa0473810 | Msa0642920 | 0.818496 | 1.901807e-52 | -8.615850e-47 |
| Msa0476600 | Msa0642920 | -0.827681 | 1.367717e-54 | -8.615850e-47 |
| Msa0476890 | Msa0642920 | -0.806504 | 7.964430e-50 | -8.615850e-47 |
| Msa0478080 | Msa0642920 | 0.808291 | 3.328657e-50 | -8.615850e-47 |
| Msa0480260 | Msa0642920 | 0.804910 | 1.721355e-49 | -8.615850e-47 |
| Msa0480540 | Msa0642920 | 0.814836 | 1.257836e-51 | -8.615850e-47 |
| Msa0480550 | Msa0642920 | 0.810789 | 9.681445e-51 | -8.615850e-47 |
| Msa0240630 | Msa0642920 | -0.813401 | 2.607360e-51 | -8.615850e-47 |
| Msa0246140 | Msa0642920 | 0.830171 | 3.412880e-55 | -8.615850e-47 |
| Msa0254640 | Msa0642920 | 0.858666 | 7.042449e-63 | -8.615850e-47 |
| Msa0259770 | Msa0642920 | -0.811717 | 6.088733e-51 | -8.615850e-47 |
| Msa0261350 | Msa0642920 | -0.807295 | 5.418766e-50 | -8.615850e-47 |
| Msa0265480 | Msa0642920 | 0.815752 | 7.871363e-52 | -8.615850e-47 |
| Msa0266330 | Msa0642920 | -0.814340 | 1.619714e-51 | -8.615850e-47 |
| Msa0269710 | Msa0642920 | 0.807257 | 5.520982e-50 | -8.615850e-47 |
| Msa0284730 | Msa0642920 | 0.844128 | 9.159415e-59 | -8.615850e-47 |
| Msa0299130 | Msa0642920 | -0.802759 | 4.817474e-49 | -8.615850e-47 |
| Msa0306310 | Msa0642920 | 0.830901 | 2.261305e-55 | -8.615850e-47 |
| Msa0310270 | Msa0642920 | -0.837348 | 5.479618e-57 | -8.615850e-47 |
| Msa0319680 | Msa0642920 | 0.861365 | 1.079667e-63 | -8.615850e-47 |
| Msa0332360 | Msa0642920 | 0.832474 | 9.258969e-56 | -8.615850e-47 |
| Msa0340370 | Msa0642920 | 0.822577 | 2.198941e-53 | -8.615850e-47 |
| Msa0340700 | Msa0642920 | -0.810146 | 1.332697e-50 | -8.615850e-47 |
| Msa0341950 | Msa0642920 | -0.810073 | 1.381618e-50 | -8.615850e-47 |
| Msa0345050 | Msa0642920 | 0.809612 | 1.736457e-50 | -8.615850e-47 |
| Msa0345890 | Msa0642920 | 0.808559 | 2.918229e-50 | -8.615850e-47 |
| Msa0355630 | Msa0642920 | -0.802802 | 4.719232e-49 | -8.615850e-47 |
| Msa0358750 | Msa0642920 | -0.815138 | 1.078084e-51 | -8.615850e-47 |
| Msa0364030 | Msa0642920 | -0.801398 | 9.174456e-49 | -8.615850e-47 |
| Msa0488580 | Msa0642920 | 0.820500 | 6.637232e-53 | -8.615850e-47 |
| Msa0492330 | Msa0642920 | -0.814564 | 1.444845e-51 | -8.615850e-47 |
| Msa0497680 | Msa0642920 | 0.817218 | 3.695847e-52 | -8.615850e-47 |
| Msa0497690 | Msa0642920 | 0.801707 | 7.929879e-49 | -8.615850e-47 |
| Msa0497860 | Msa0642920 | 0.832803 | 7.675904e-56 | -8.615850e-47 |
| Msa0500580 | Msa0642920 | -0.803711 | 3.059904e-49 | -8.615850e-47 |
| Msa0500910 | Msa0642920 | 0.814196 | 1.742635e-51 | -8.615850e-47 |
| Msa0505640 | Msa0642920 | 0.822490 | 2.303206e-53 | -8.615850e-47 |
| Msa0506370 | Msa0642920 | 0.828569 | 8.357370e-55 | -8.615850e-47 |
| Msa0508160 | Msa0642920 | 0.829726 | 4.381352e-55 | -8.615850e-47 |
| Msa0517990 | Msa0642920 | 0.813298 | 2.747069e-51 | -8.615850e-47 |
| Msa0521260 | Msa0642920 | -0.810721 | 1.001479e-50 | -8.615850e-47 |
| Msa0522170 | Msa0642920 | 0.807285 | 5.447213e-50 | -8.615850e-47 |
| Msa0527210 | Msa0642920 | -0.800848 | 1.188836e-48 | -8.615850e-47 |
| Msa0532870 | Msa0642920 | -0.816067 | 6.694178e-52 | -8.615850e-47 |
| Msa0547060 | Msa0642920 | 0.953463 | 2.596603e-111 | -8.615850e-47 |
| Msa0550980 | Msa0642920 | -0.819470 | 1.141789e-52 | -8.615850e-47 |
| Msa0550990 | Msa0642920 | -0.807841 | 4.150371e-50 | -8.615850e-47 |
| Msa0557440 | Msa0642920 | -0.825168 | 5.428788e-54 | -8.615850e-47 |
| Msa0560280 | Msa0642920 | 0.835571 | 1.553348e-56 | -8.615850e-47 |
| Msa0562580 | Msa0642920 | 0.807527 | 4.838938e-50 | -8.615850e-47 |
| Msa0565180 | Msa0642920 | 0.831185 | 1.926164e-55 | -8.615850e-47 |
| Msa0565430 | Msa0642920 | -0.800696 | 1.276681e-48 | -8.615850e-47 |
| Msa0567190 | Msa0642920 | -0.806974 | 6.337258e-50 | -8.615850e-47 |
| Msa0572730 | Msa0642920 | -0.816290 | 5.968182e-52 | -8.615850e-47 |
| Msa0573950 | Msa0642920 | 0.828855 | 7.128180e-55 | -8.615850e-47 |
| Msa0580080 | Msa0642920 | 0.815255 | 1.015452e-51 | -8.615850e-47 |
| Msa0580840 | Msa0642920 | 0.824997 | 5.958198e-54 | -8.615850e-47 |
| Msa0580890 | Msa0642920 | -0.822798 | 1.953847e-53 | -8.615850e-47 |
| Msa0583270 | Msa0642920 | -0.827345 | 1.646629e-54 | -8.615850e-47 |
| Msa0601790 | Msa0642920 | 0.916527 | 1.599955e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0642920 | MtrunA17_Chr4g0028881 | 96.902 | 936 | 17 | 1 | 1 | 924 | 1 | 936 | 0.0 | 1888 |
| Msa0642920 | MtrunA17_Chr8g0345071 | 27.795 | 331 | 189 | 10 | 580 | 876 | 52 | 366 | 1.55e-29 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0642920 | AT5G60700.2 | 79.446 | 939 | 171 | 5 | 1 | 924 | 1 | 932 | 0.0 | 1545 |
| Msa0642920 | AT5G60700.1 | 84.581 | 668 | 91 | 1 | 269 | 924 | 1 | 668 | 0.0 | 1186 |
| Msa0642920 | AT5G12260.1 | 31.203 | 266 | 148 | 10 | 593 | 834 | 73 | 327 | 1.49e-27 | 119 |
Find 160 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTTGGTTTGGAAAATT+TGG | 0.065005 | 4_3:-45240649 | None:intergenic |
| CAACCATTTGTTCTTGATTT+AGG | 0.115469 | 4_3:-45240562 | None:intergenic |
| CCCCATGTTTCTTTGTCTTT+TGG | 0.116342 | 4_3:-45238691 | None:intergenic |
| AAAGAAAATGTTAGAGATTT+TGG | 0.128444 | 4_3:+45237186 | Msa0642920:CDS |
| TTGACAACTTCAACAATTCT+TGG | 0.227499 | 4_3:-45240361 | None:intergenic |
| TAAAACTCTCTCCAATGTTT+AGG | 0.235717 | 4_3:-45240484 | None:intergenic |
| CAATCAGGCTGTTTCTCTTA+AGG | 0.258718 | 4_3:+45240840 | Msa0642920:CDS |
| CTTCTGTGTCTAAAGTTCTT+TGG | 0.263805 | 4_3:+45239356 | Msa0642920:CDS |
| ATTGGTTATTGTTGTCTTCT+TGG | 0.269213 | 4_3:-45236673 | None:intergenic |
| TTAGGCGTTGGTTCAATTTC+CGG | 0.269528 | 4_3:+45239151 | Msa0642920:CDS |
| AGGGAGATGGAAGAGAGTTC+TGG | 0.270847 | 4_3:-45240331 | None:intergenic |
| TTAGTGAATTTACCCTGTTT+TGG | 0.274450 | 4_3:-45239994 | None:intergenic |
| TGTGGTTAAGCATAATAAAA+TGG | 0.289497 | 4_3:+45240723 | Msa0642920:CDS |
| CGGTTTAAGATCTTTGATTT+AGG | 0.293132 | 4_3:+45239133 | Msa0642920:CDS |
| AAAGTATAAGAATTCAGTTT+TGG | 0.307108 | 4_3:+45237228 | Msa0642920:CDS |
| GAATACACTGCTTGTATAAC+TGG | 0.310239 | 4_3:-45239193 | None:intergenic |
| AATCAGGCTGTTTCTCTTAA+GGG | 0.311927 | 4_3:+45240841 | Msa0642920:CDS |
| AGCTCTCAAATGGCCTCTTT+TGG | 0.312366 | 4_3:+45239096 | Msa0642920:CDS |
| CAACAATTCTTGGTGTGTAT+AGG | 0.312888 | 4_3:-45240351 | None:intergenic |
| CAAGTTTGGGTGCTTTCGTT+CGG | 0.315012 | 4_3:+45236998 | Msa0642920:CDS |
| TCACCAGTTGAGAAGGTAAA+AGG | 0.315759 | 4_3:-45237451 | None:intergenic |
| GAATTGTTGTGGCTTGAAAT+TGG | 0.317167 | 4_3:-45236691 | None:intergenic |
| TAGGCGTTGGTTCAATTTCC+GGG | 0.318547 | 4_3:+45239152 | Msa0642920:CDS |
| AACAATTCTTGGTGTGTATA+GGG | 0.318766 | 4_3:-45240350 | None:intergenic |
| CTCTTGAGGGACGCCTCGTT+TGG | 0.323081 | 4_3:-45237025 | None:intergenic |
| TTTGCAGACAGAAGCTGATT+TGG | 0.331055 | 4_3:+45237132 | Msa0642920:CDS |
| AAAACTCTCTCCAATGTTTA+GGG | 0.348787 | 4_3:-45240483 | None:intergenic |
| TTCATCAATTACCTTGTAGT+TGG | 0.366831 | 4_3:+45240446 | Msa0642920:CDS |
| TCATCAATTACCTTGTAGTT+GGG | 0.371809 | 4_3:+45240447 | Msa0642920:CDS |
| GGGAGATGGAAGAGAGTTCT+GGG | 0.371894 | 4_3:-45240330 | None:intergenic |
| AATTGTGTCGCATTCCATTT+CGG | 0.376037 | 4_3:-45240391 | None:intergenic |
| GACTTAAATTTCCTATAACT+TGG | 0.376357 | 4_3:-45237298 | None:intergenic |
| TTGATCCATAGGTAGTAATA+AGG | 0.377040 | 4_3:-45240265 | None:intergenic |
| CAAATGGTTGGCAAGCTTCA+TGG | 0.386635 | 4_3:+45240575 | Msa0642920:CDS |
| CTATCCATGTTGAAAGTGAT+TGG | 0.388496 | 4_3:-45240067 | None:intergenic |
| TGTGCAATTCTTGAGAAATC+TGG | 0.389282 | 4_3:-45236581 | None:intergenic |
| CTTGATTTAGGAATTTGAAC+CGG | 0.391501 | 4_3:-45240550 | None:intergenic |
| TCAACATCATAACCCAAAAC+AGG | 0.393205 | 4_3:+45239981 | Msa0642920:CDS |
| AACTAGTAGGTTCATTTGAA+TGG | 0.394328 | 4_3:+45240113 | Msa0642920:CDS |
| TGGACCTTTCAAATCCCATT+TGG | 0.397443 | 4_3:-45236873 | None:intergenic |
| GCTTCAGAAACTAATTCAAA+TGG | 0.399454 | 4_3:+45239307 | Msa0642920:CDS |
| GCTTTCCACGATTCTCTTGA+GGG | 0.406469 | 4_3:-45237038 | None:intergenic |
| TGATGAAGGTAAGGTGTGTT+TGG | 0.414604 | 4_3:-45240430 | None:intergenic |
| TTTATCAATAGTGATATCAT+AGG | 0.415176 | 4_3:-45237353 | None:intergenic |
| CCATCTTCAGATGACAACTT+TGG | 0.415502 | 4_3:+45240211 | Msa0642920:CDS |
| AATTCTTGAGAAATCTGGTT+TGG | 0.422536 | 4_3:-45236576 | None:intergenic |
| CGTTCTTTGCAAACCAAAAG+AGG | 0.427496 | 4_3:-45239109 | None:intergenic |
| TAAAGCTGCTGGTGCTAAGT+TGG | 0.428332 | 4_3:+45240867 | Msa0642920:CDS |
| TCCACAGTAATTACAACACT+TGG | 0.428866 | 4_3:-45239247 | None:intergenic |
| AGCAGTGTATTCTAGTTTGA+AGG | 0.435732 | 4_3:+45239204 | Msa0642920:CDS |
| TAATGAACATGAAATCCAAA+TGG | 0.437665 | 4_3:+45236858 | Msa0642920:CDS |
| GGCGAGAAGTGGAGATTCCT+TGG | 0.445610 | 4_3:+45236394 | Msa0642920:CDS |
| TCTCACCTTATTACTACCTA+TGG | 0.445983 | 4_3:+45240260 | Msa0642920:CDS |
| AATTTCATCTCCTAGATAGT+AGG | 0.446568 | 4_3:-45240044 | None:intergenic |
| TTGAAGTGTCTCACTTCCAA+TGG | 0.449324 | 4_3:-45236831 | None:intergenic |
| CTCACCAATGCCTACTATCT+AGG | 0.449528 | 4_3:+45240034 | Msa0642920:CDS |
| ACGGATAAGTTTCATAAGCT+CGG | 0.451724 | 4_3:+45237072 | Msa0642920:CDS |
| ATTGATATGATGTATTTAAG+AGG | 0.454107 | 4_3:+45240610 | Msa0642920:CDS |
| GAGAGACTTGAGGGTCATAA+TGG | 0.457607 | 4_3:-45240306 | None:intergenic |
| GATATTGCCATTTAGACAAA+AGG | 0.460055 | 4_3:+45237264 | Msa0642920:CDS |
| AAGTTTGGGTGCTTTCGTTC+GGG | 0.460856 | 4_3:+45236999 | Msa0642920:CDS |
| ATGATCACACCACACATTGT+AGG | 0.461395 | 4_3:+45236620 | Msa0642920:CDS |
| TTGGTTCTTAAATCAATTGA+AGG | 0.462460 | 4_3:-45236557 | None:intergenic |
| CACTATTGATAAAATTGTGC+AGG | 0.462476 | 4_3:+45237363 | Msa0642920:CDS |
| ATTCCTAAATCAAGAACAAA+TGG | 0.463502 | 4_3:+45240559 | Msa0642920:CDS |
| AAGCTGCAGCAGCTCTCAAA+TGG | 0.469839 | 4_3:+45239086 | Msa0642920:CDS |
| GTTGCTGTTGATCATCATAC+TGG | 0.470551 | 4_3:+45240928 | Msa0642920:CDS |
| AAATTTAAGTCTAAAGAAGC+TGG | 0.471279 | 4_3:+45237310 | Msa0642920:CDS |
| AAAGAGAGAGCTTTATGAAG+AGG | 0.472811 | 4_3:+45236787 | Msa0642920:CDS |
| TGTGAGAAAGGCTTTGAAGA+TGG | 0.472901 | 4_3:+45239285 | Msa0642920:CDS |
| AAAGCTGCTGGTGCTAAGTT+GGG | 0.474235 | 4_3:+45240868 | Msa0642920:CDS |
| ATGTTGAATGACTATGTTGC+TGG | 0.474502 | 4_3:+45236422 | Msa0642920:CDS |
| TGGTGGAAAGCACTTTCATC+TGG | 0.474973 | 4_3:+45238893 | Msa0642920:CDS |
| GTACTATGGAAGGTTTCAAA+TGG | 0.475657 | 4_3:+45237108 | Msa0642920:CDS |
| CTTCAAAAGTATAGAAATGC+AGG | 0.477205 | 4_3:+45238646 | Msa0642920:CDS |
| CGGATAAGTTTCATAAGCTC+GGG | 0.477643 | 4_3:+45237073 | Msa0642920:CDS |
| AGCACCCAAACTTGATGAAA+AGG | 0.479524 | 4_3:-45236989 | None:intergenic |
| GTGATATCATAGGCAGGATC+AGG | 0.479851 | 4_3:-45237343 | None:intergenic |
| GAGAAACAGCCTGATTGAAA+AGG | 0.480437 | 4_3:-45240834 | None:intergenic |
| AAGATCTTTGATTTAGGCGT+TGG | 0.481505 | 4_3:+45239139 | Msa0642920:CDS |
| GAAGGTAAGGTGTGTTTGGA+TGG | 0.481855 | 4_3:-45240426 | None:intergenic |
| TTGTCAAAGAAAGACCGAAA+TGG | 0.487112 | 4_3:+45240377 | Msa0642920:CDS |
| CTTCAGAAACTAATTCAAAT+GGG | 0.487507 | 4_3:+45239308 | Msa0642920:CDS |
| CTTAAGGGACTTAAAGCTGC+TGG | 0.489733 | 4_3:+45240856 | Msa0642920:CDS |
| GAAGCAACCATAAAACTAGT+AGG | 0.492724 | 4_3:+45240100 | Msa0642920:CDS |
| AATTTCCAAAACAAAACCAT+TGG | 0.494665 | 4_3:+45236815 | Msa0642920:CDS |
| CAAGGTAATTGATGAAGGTA+AGG | 0.495150 | 4_3:-45240439 | None:intergenic |
| ATCTGGCTACATAACACAAT+GGG | 0.497406 | 4_3:+45238910 | Msa0642920:CDS |
| GTTCTGGGAGAGAGACTTGA+GGG | 0.497749 | 4_3:-45240315 | None:intergenic |
| TGAGTGCATATTTGATCCAT+AGG | 0.502316 | 4_3:-45240276 | None:intergenic |
| AATGAACATGAAATCCAAAT+GGG | 0.502594 | 4_3:+45236859 | Msa0642920:CDS |
| TTCAAGTTCGCGATGATCAA+TGG | 0.502893 | 4_3:+45238873 | Msa0642920:CDS |
| CTGGTGAAGATTTGCACCTC+AGG | 0.503101 | 4_3:+45237467 | Msa0642920:CDS |
| CGAAATACGACGGCGAGAAG+TGG | 0.507540 | 4_3:+45236383 | Msa0642920:CDS |
| AGGTAGGGTTTGTTGAAGCA+AGG | 0.507568 | 4_3:-45236969 | None:intergenic |
| TGTGTCTAAAGTTCTTTGGA+TGG | 0.510078 | 4_3:+45239360 | Msa0642920:CDS |
| CCAAAGTTGTCATCTGAAGA+TGG | 0.511797 | 4_3:-45240211 | None:intergenic |
| CATCAATTACCTTGTAGTTG+GGG | 0.519801 | 4_3:+45240448 | Msa0642920:CDS |
| TCATTCTCACAAACAAGAGA+TGG | 0.521795 | 4_3:-45236713 | None:intergenic |
| TGCTGGTGCTAAGTTGGGAC+AGG | 0.530192 | 4_3:+45240873 | Msa0642920:CDS |
| AACTACAAGGTAATTGATGA+AGG | 0.532933 | 4_3:-45240444 | None:intergenic |
| ATCTCCTAGATAGTAGGCAT+TGG | 0.534319 | 4_3:-45240038 | None:intergenic |
| CTAAAATCATCCTTCAACAA+TGG | 0.535382 | 4_3:-45240757 | None:intergenic |
| AGCTTTCCACGATTCTCTTG+AGG | 0.537297 | 4_3:-45237039 | None:intergenic |
| GCAGTGTATTCTAGTTTGAA+GGG | 0.542949 | 4_3:+45239205 | Msa0642920:CDS |
| AAAGCATACATTGTTGTCCC+TGG | 0.547242 | 4_3:+45239040 | Msa0642920:CDS |
| TATGTGCACCTGGTTCCATA+TGG | 0.547518 | 4_3:-45240684 | None:intergenic |
| TATTGATGTTAATGTGAGAA+AGG | 0.547988 | 4_3:+45239273 | Msa0642920:CDS |
| GCTGCTGCAGCTTGTTCACA+AGG | 0.548041 | 4_3:-45239076 | None:intergenic |
| TTGATTTAGGAATTTGAACC+GGG | 0.548162 | 4_3:-45240549 | None:intergenic |
| TGGAAAGCTATAACGATTCA+CGG | 0.548641 | 4_3:+45237053 | Msa0642920:CDS |
| CAAATCTTCACCAGTTGAGA+AGG | 0.549226 | 4_3:-45237458 | None:intergenic |
| GATGGTAATCTTGAAGCTGA+AGG | 0.550276 | 4_3:-45240805 | None:intergenic |
| TCTCAAGAATTGCACAACAA+TGG | 0.551342 | 4_3:+45236588 | Msa0642920:CDS |
| TCTTGGTGTGTATAGGGAGA+TGG | 0.554912 | 4_3:-45240344 | None:intergenic |
| TTGCAGATTGGAATAAAATG+AGG | 0.555574 | 4_3:+45239951 | Msa0642920:intron |
| GTCATTCAACATTCCATCCA+AGG | 0.556417 | 4_3:-45236411 | None:intergenic |
| AACACTGCTCCCCAACTACA+AGG | 0.561032 | 4_3:-45240457 | None:intergenic |
| TTGATATGATGTATTTAAGA+GGG | 0.562184 | 4_3:+45240611 | Msa0642920:CDS |
| AACAAGAGATGGAATTGTTG+TGG | 0.564714 | 4_3:-45236702 | None:intergenic |
| TCCAAAAGACAAAGAAACAT+GGG | 0.566745 | 4_3:+45238690 | Msa0642920:CDS |
| AGAAGTGGAGATTCCTTGGA+TGG | 0.567533 | 4_3:+45236398 | Msa0642920:CDS |
| TAAGAGCAGTGAGTGAAAGT+TGG | 0.570309 | 4_3:+45240185 | Msa0642920:CDS |
| TCAATAGTGATATCATAGGC+AGG | 0.570472 | 4_3:-45237349 | None:intergenic |
| CTGCTCTTATGAGTCCACCT+TGG | 0.573990 | 4_3:-45240171 | None:intergenic |
| AAATCCAAATGGGATTTGAA+AGG | 0.575214 | 4_3:+45236869 | Msa0642920:CDS |
| GTTGATGATGATATGATACC+TGG | 0.577017 | 4_3:+45237163 | Msa0642920:CDS |
| TAATTCAAATGGGACTACAT+TGG | 0.578547 | 4_3:+45239318 | Msa0642920:CDS |
| CTAAATCAAGAACAAATGGT+TGG | 0.578613 | 4_3:+45240563 | Msa0642920:CDS |
| TTTGCACTAATATGTGCACC+TGG | 0.582857 | 4_3:-45240694 | None:intergenic |
| CCAAACTTGATGAAAAGGTA+GGG | 0.586043 | 4_3:-45236984 | None:intergenic |
| GCATACATTGTTGTCCCTGG+TGG | 0.587750 | 4_3:+45239043 | Msa0642920:CDS |
| TCAACTAACCATATGGAACC+AGG | 0.589500 | 4_3:+45240676 | Msa0642920:CDS |
| TTTATGTTTACATGAACATG+AGG | 0.594622 | 4_3:+45240503 | Msa0642920:CDS |
| CAAGGACAGAAATTTCCACC+AGG | 0.595546 | 4_3:-45239058 | None:intergenic |
| CCCAAACTTGATGAAAAGGT+AGG | 0.596316 | 4_3:-45236985 | None:intergenic |
| AATTCCAATCACTTTCAACA+TGG | 0.597469 | 4_3:+45240063 | Msa0642920:CDS |
| AGTTCTGGGAGAGAGACTTG+AGG | 0.603063 | 4_3:-45240316 | None:intergenic |
| TTCGTTCGGGAGTCCAAACG+AGG | 0.604649 | 4_3:+45237012 | Msa0642920:CDS |
| ATCCAAAAGACAAAGAAACA+TGG | 0.611454 | 4_3:+45238689 | Msa0642920:CDS |
| CAGAATCTTGAGCAGTGATG+AGG | 0.612938 | 4_3:-45240955 | None:intergenic |
| CCACAGTAATTACAACACTT+GGG | 0.613515 | 4_3:-45239246 | None:intergenic |
| TGATTGAAAAGGTTCAAAGA+TGG | 0.616471 | 4_3:-45240823 | None:intergenic |
| TGCCTCAGAGTTCGACACCC+CGG | 0.617245 | 4_3:-45239170 | None:intergenic |
| TATTAGTGCAAAAGATAATG+TGG | 0.620559 | 4_3:+45240705 | Msa0642920:CDS |
| GGTTCATTTGAATGGCCACA+TGG | 0.621803 | 4_3:+45240121 | Msa0642920:CDS |
| AGGCGTTGGTTCAATTTCCG+GGG | 0.624380 | 4_3:+45239153 | Msa0642920:CDS |
| CATCTGGCTACATAACACAA+TGG | 0.632893 | 4_3:+45238909 | Msa0642920:CDS |
| CAACATCATAACCCAAAACA+GGG | 0.633195 | 4_3:+45239982 | Msa0642920:CDS |
| AAGTTCGCGATGATCAATGG+TGG | 0.635116 | 4_3:+45238876 | Msa0642920:CDS |
| ACTTTAGACACAGAAGCCCT+AGG | 0.635342 | 4_3:-45239349 | None:intergenic |
| CTAAGAAGAAGAATCATCCA+AGG | 0.647301 | 4_3:+45240154 | Msa0642920:CDS |
| ACAGGGTAAATTCACTAACA+AGG | 0.650361 | 4_3:+45239999 | Msa0642920:CDS |
| TGATAATGTCCTACAATGTG+TGG | 0.652804 | 4_3:-45236629 | None:intergenic |
| GGCGTCCCTCAAGAGAATCG+TGG | 0.659434 | 4_3:+45237033 | Msa0642920:CDS |
| AGAAGAAGAATCATCCAAGG+TGG | 0.677908 | 4_3:+45240157 | Msa0642920:CDS |
| CCCAAGTGTTGTAATTACTG+TGG | 0.680116 | 4_3:+45239246 | Msa0642920:CDS |
| TTCCGGGGTGTCGAACTCTG+AGG | 0.689190 | 4_3:+45239168 | Msa0642920:CDS |
| CCAAAAGACAAAGAAACATG+GGG | 0.703653 | 4_3:+45238691 | Msa0642920:CDS |
| AAGGACAGAAATTTCCACCA+GGG | 0.730912 | 4_3:-45239057 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATAAAATAAAATTAT+GGG | - | chr4_3:45237623-45237642 | None:intergenic | 0.0% |
| !! | TATATAAAATAAAATTATGG+GGG | - | chr4_3:45237621-45237640 | None:intergenic | 10.0% |
| !!! | AGATTTTCTATATTAAAATA+AGG | - | chr4_3:45238071-45238090 | None:intergenic | 10.0% |
| !!! | AATGATATATAACTAAATTT+TGG | + | chr4_3:45239469-45239488 | Msa0642920:intron | 10.0% |
| !!! | ATGATATATAACTAAATTTT+GGG | + | chr4_3:45239470-45239489 | Msa0642920:intron | 10.0% |
| !!! | TATCATAATAAATTTTGAAT+TGG | + | chr4_3:45239767-45239786 | Msa0642920:intron | 10.0% |
| !! | TCATAAAATAAAATTGCATA+TGG | - | chr4_3:45237646-45237665 | None:intergenic | 15.0% |
| !!! | ACATAAATGACATTTTTTTT+TGG | - | chr4_3:45237690-45237709 | None:intergenic | 15.0% |
| !!! | TTTATTCAATTTTCATATGA+AGG | + | chr4_3:45238336-45238355 | Msa0642920:intron | 15.0% |
| !!! | TAATAATTTTTTACATGTGT+TGG | + | chr4_3:45238529-45238548 | Msa0642920:intron | 15.0% |
| !!! | AACATTTTTATTGTACTACA+TGG | + | chr4_3:45236532-45236551 | Msa0642920:CDS | 20.0% |
| !!! | ACATTTTTATTGTACTACAT+GGG | + | chr4_3:45236533-45236552 | Msa0642920:CDS | 20.0% |
| !!! | TTCAACAAAACATTGATTTT+CGG | - | chr4_3:45236911-45236930 | None:intergenic | 20.0% |
| !!! | AAAGAAAATGTTAGAGATTT+TGG | + | chr4_3:45237186-45237205 | Msa0642920:CDS | 20.0% |
| !!! | AAAGTATAAGAATTCAGTTT+TGG | + | chr4_3:45237228-45237247 | Msa0642920:CDS | 20.0% |
| !!! | AAGTATAAGAATTCAGTTTT+GGG | + | chr4_3:45237229-45237248 | Msa0642920:CDS | 20.0% |
| !!! | ATTTTACTTTTCCAAGTTAT+AGG | + | chr4_3:45237287-45237306 | Msa0642920:CDS | 20.0% |
| !! | TTTATCAATAGTGATATCAT+AGG | - | chr4_3:45237356-45237375 | None:intergenic | 20.0% |
| !! | TCAAAATAGTAAGTTTGTAT+CGG | - | chr4_3:45238009-45238028 | None:intergenic | 20.0% |
| !! | CACATGTAAAAAATTATTAC+TGG | - | chr4_3:45238528-45238547 | None:intergenic | 20.0% |
| !!! | NNNNNTTGTTTCTGATACAT+AGG | - | chr4_3:45238737-45238756 | None:intergenic | 20.0% |
| !! | AAAAAATAGACTTTCTTACT+AGG | - | chr4_3:45239409-45239428 | None:intergenic | 20.0% |
| !! | ATCATATAATGATCTAACAA+TGG | + | chr4_3:45239522-45239541 | Msa0642920:intron | 20.0% |
| !!! | TGTGTTTTAATTGGTTTAAT+CGG | - | chr4_3:45239692-45239711 | None:intergenic | 20.0% |
| !!! | CAATTAGATTGTGTTTTAAT+TGG | - | chr4_3:45239701-45239720 | None:intergenic | 20.0% |
| !! | AGGTTAAACTTTACTAAATA+TGG | - | chr4_3:45239876-45239895 | None:intergenic | 20.0% |
| !! | TATTTAGTAAAGTTTAACCT+AGG | + | chr4_3:45239876-45239895 | Msa0642920:intron | 20.0% |
| !! | ATTGATATGATGTATTTAAG+AGG | + | chr4_3:45240610-45240629 | Msa0642920:CDS | 20.0% |
| !! | TTGATATGATGTATTTAAGA+GGG | + | chr4_3:45240611-45240630 | Msa0642920:CDS | 20.0% |
| !! | TTGGTTCTTAAATCAATTGA+AGG | - | chr4_3:45236560-45236579 | None:intergenic | 25.0% |
| ! | AATTTCCAAAACAAAACCAT+TGG | + | chr4_3:45236815-45236834 | Msa0642920:CDS | 25.0% |
| ! | TAATGAACATGAAATCCAAA+TGG | + | chr4_3:45236858-45236877 | Msa0642920:CDS | 25.0% |
| ! | AATGAACATGAAATCCAAAT+GGG | + | chr4_3:45236859-45236878 | Msa0642920:CDS | 25.0% |
| !!! | AAAGTGTTTTTCTCTTGAAA+TGG | - | chr4_3:45236934-45236953 | None:intergenic | 25.0% |
| !! | GTAAAATCCTTTTGTCTAAA+TGG | - | chr4_3:45237274-45237293 | None:intergenic | 25.0% |
| ! | GACTTAAATTTCCTATAACT+TGG | - | chr4_3:45237301-45237320 | None:intergenic | 25.0% |
| ! | AAATTTAAGTCTAAAGAAGC+TGG | + | chr4_3:45237310-45237329 | Msa0642920:CDS | 25.0% |
| !!! | TTGATTTTCTTTCAAGTTCT+TGG | + | chr4_3:45237386-45237405 | Msa0642920:CDS | 25.0% |
| ! | TGACAAAAGGTCAAATATAA+AGG | + | chr4_3:45237712-45237731 | Msa0642920:intron | 25.0% |
| ! | GACAAAAGGTCAAATATAAA+GGG | + | chr4_3:45237713-45237732 | Msa0642920:intron | 25.0% |
| ! | TTTCACTACATTAAAGTAAG+TGG | - | chr4_3:45238114-45238133 | None:intergenic | 25.0% |
| ! | AAATAAGTCATTGTTTGACT+TGG | - | chr4_3:45238179-45238198 | None:intergenic | 25.0% |
| ! | AAGTCAAACAATGACTTATT+TGG | + | chr4_3:45238178-45238197 | Msa0642920:intron | 25.0% |
| ! | AAAAATTATTACTGGTGTCT+AGG | - | chr4_3:45238520-45238539 | None:intergenic | 25.0% |
| !!! | GATCTAAATTTTTCAAGAAG+TGG | - | chr4_3:45239007-45239026 | None:intergenic | 25.0% |
| ! | GAAAAATTTAGATCAACAGT+TGG | + | chr4_3:45239013-45239032 | Msa0642920:CDS | 25.0% |
| ! | TATTGATGTTAATGTGAGAA+AGG | + | chr4_3:45239273-45239292 | Msa0642920:CDS | 25.0% |
| ! | CTTCAGAAACTAATTCAAAT+GGG | + | chr4_3:45239308-45239327 | Msa0642920:CDS | 25.0% |
| !!! | TAAGTCAATGTTTTAAAGAC+CGG | + | chr4_3:45239547-45239566 | Msa0642920:intron | 25.0% |
| !!! | AAATGAACCTACTAGTTTTA+TGG | - | chr4_3:45240110-45240129 | None:intergenic | 25.0% |
| ! | TTTATGTTTACATGAACATG+AGG | + | chr4_3:45240503-45240522 | Msa0642920:CDS | 25.0% |
| ! | ATTCCTAAATCAAGAACAAA+TGG | + | chr4_3:45240559-45240578 | Msa0642920:CDS | 25.0% |
| !!! | AAGTTTTTCAACTAACCATA+TGG | + | chr4_3:45240669-45240688 | Msa0642920:CDS | 25.0% |
| ! | TATTAGTGCAAAAGATAATG+TGG | + | chr4_3:45240705-45240724 | Msa0642920:CDS | 25.0% |
| ! | TGTGGTTAAGCATAATAAAA+TGG | + | chr4_3:45240723-45240742 | Msa0642920:CDS | 25.0% |
| !!! | GCATAATAAAATGGATTTTG+AGG | + | chr4_3:45240732-45240751 | Msa0642920:CDS | 25.0% |
| !!! | TAATTTTTGAGGCTTGGTTT+TGG | - | chr4_3:45236453-45236472 | None:intergenic | 30.0% |
| AAAACCAAGCCTCAAAAATT+AGG | + | chr4_3:45236452-45236471 | Msa0642920:CDS | 30.0% | |
| !! | TTTGTTGTGCCTAATTTTTG+AGG | - | chr4_3:45236464-45236483 | None:intergenic | 30.0% |
| AATTCTTGAGAAATCTGGTT+TGG | - | chr4_3:45236579-45236598 | None:intergenic | 30.0% | |
| ATTGGTTATTGTTGTCTTCT+TGG | - | chr4_3:45236676-45236695 | None:intergenic | 30.0% | |
| AAATCCAAATGGGATTTGAA+AGG | + | chr4_3:45236869-45236888 | Msa0642920:CDS | 30.0% | |
| !! | ATTTTCGGTTTGTTTGGATT+TGG | - | chr4_3:45236896-45236915 | None:intergenic | 30.0% |
| !!! | ACATTGATTTTCGGTTTGTT+TGG | - | chr4_3:45236902-45236921 | None:intergenic | 30.0% |
| !! | GGTTACGATTTTAAGTACTA+TGG | + | chr4_3:45237094-45237113 | Msa0642920:CDS | 30.0% |
| !! | ACGATTTTAAGTACTATGGA+AGG | + | chr4_3:45237098-45237117 | Msa0642920:CDS | 30.0% |
| ! | ATCTCTAACATTTTCTTTCC+AGG | - | chr4_3:45237184-45237203 | None:intergenic | 30.0% |
| !!! | AATTCAGTTTTGGGAAGTAT+TGG | + | chr4_3:45237238-45237257 | Msa0642920:CDS | 30.0% |
| !!! | ATTCAGTTTTGGGAAGTATT+GGG | + | chr4_3:45237239-45237258 | Msa0642920:CDS | 30.0% |
| ! | GATATTGCCATTTAGACAAA+AGG | + | chr4_3:45237264-45237283 | Msa0642920:CDS | 30.0% |
| CACTATTGATAAAATTGTGC+AGG | + | chr4_3:45237363-45237382 | Msa0642920:CDS | 30.0% | |
| ! | GAGTTTGATTTATATGCCAT+AGG | + | chr4_3:45237582-45237601 | Msa0642920:intron | 30.0% |
| GTCATTTATGTAGTGACAAA+AGG | + | chr4_3:45237699-45237718 | Msa0642920:intron | 30.0% | |
| !! | CTTTGGAATTCTGATTTCAA+AGG | - | chr4_3:45238261-45238280 | None:intergenic | 30.0% |
| GTTTGTTTGATTGCAAATAG+AGG | - | chr4_3:45238379-45238398 | None:intergenic | 30.0% | |
| ! | CTTCAAAAGTATAGAAATGC+AGG | + | chr4_3:45238646-45238665 | Msa0642920:CDS | 30.0% |
| ATCCAAAAGACAAAGAAACA+TGG | + | chr4_3:45238689-45238708 | Msa0642920:CDS | 30.0% | |
| TCCAAAAGACAAAGAAACAT+GGG | + | chr4_3:45238690-45238709 | Msa0642920:CDS | 30.0% | |
| ! | CGGTTTAAGATCTTTGATTT+AGG | + | chr4_3:45239133-45239152 | Msa0642920:CDS | 30.0% |
| GCTTCAGAAACTAATTCAAA+TGG | + | chr4_3:45239307-45239326 | Msa0642920:CDS | 30.0% | |
| TAATTCAAATGGGACTACAT+TGG | + | chr4_3:45239318-45239337 | Msa0642920:CDS | 30.0% | |
| GTCTAACTCATCATGTATAT+AGG | + | chr4_3:45239496-45239515 | Msa0642920:intron | 30.0% | |
| !! | TTTTAAAGACCGGTTAAATC+AGG | + | chr4_3:45239557-45239576 | Msa0642920:intron | 30.0% |
| GATCAAACCAATTGACAAAT+TGG | - | chr4_3:45239589-45239608 | None:intergenic | 30.0% | |
| ! | TACAATTTTCTCTTGCAGAT+TGG | + | chr4_3:45239939-45239958 | Msa0642920:intron | 30.0% |
| TTGCAGATTGGAATAAAATG+AGG | + | chr4_3:45239951-45239970 | Msa0642920:intron | 30.0% | |
| ! | TAGTGAATTTACCCTGTTTT+GGG | - | chr4_3:45239996-45240015 | None:intergenic | 30.0% |
| ! | TTAGTGAATTTACCCTGTTT+TGG | - | chr4_3:45239997-45240016 | None:intergenic | 30.0% |
| AATTTCATCTCCTAGATAGT+AGG | - | chr4_3:45240047-45240066 | None:intergenic | 30.0% | |
| AATTCCAATCACTTTCAACA+TGG | + | chr4_3:45240063-45240082 | Msa0642920:CDS | 30.0% | |
| AACTAGTAGGTTCATTTGAA+TGG | + | chr4_3:45240113-45240132 | Msa0642920:CDS | 30.0% | |
| TTGATCCATAGGTAGTAATA+AGG | - | chr4_3:45240268-45240287 | None:intergenic | 30.0% | |
| ! | AACAATTCTTGGTGTGTATA+GGG | - | chr4_3:45240353-45240372 | None:intergenic | 30.0% |
| TTGACAACTTCAACAATTCT+TGG | - | chr4_3:45240364-45240383 | None:intergenic | 30.0% | |
| AACTACAAGGTAATTGATGA+AGG | - | chr4_3:45240447-45240466 | None:intergenic | 30.0% | |
| TTCATCAATTACCTTGTAGT+TGG | + | chr4_3:45240446-45240465 | Msa0642920:CDS | 30.0% | |
| TCATCAATTACCTTGTAGTT+GGG | + | chr4_3:45240447-45240466 | Msa0642920:CDS | 30.0% | |
| AAAACTCTCTCCAATGTTTA+GGG | - | chr4_3:45240486-45240505 | None:intergenic | 30.0% | |
| TAAAACTCTCTCCAATGTTT+AGG | - | chr4_3:45240487-45240506 | None:intergenic | 30.0% | |
| TTGATTTAGGAATTTGAACC+GGG | - | chr4_3:45240552-45240571 | None:intergenic | 30.0% | |
| CTTGATTTAGGAATTTGAAC+CGG | - | chr4_3:45240553-45240572 | None:intergenic | 30.0% | |
| CAACCATTTGTTCTTGATTT+AGG | - | chr4_3:45240565-45240584 | None:intergenic | 30.0% | |
| CTAAATCAAGAACAAATGGT+TGG | + | chr4_3:45240563-45240582 | Msa0642920:CDS | 30.0% | |
| CTAAAATCATCCTTCAACAA+TGG | - | chr4_3:45240760-45240779 | None:intergenic | 30.0% | |
| ! | CATTGTTGAAGGATGATTTT+AGG | + | chr4_3:45240758-45240777 | Msa0642920:CDS | 30.0% |
| !! | GATTTTAGGAATTTTTTGCC+TGG | + | chr4_3:45240772-45240791 | Msa0642920:CDS | 30.0% |
| TGATTGAAAAGGTTCAAAGA+TGG | - | chr4_3:45240826-45240845 | None:intergenic | 30.0% | |
| ! | ATCTTTGAACCTTTTCAATC+AGG | + | chr4_3:45240825-45240844 | Msa0642920:CDS | 30.0% |
| !! | GAGTTTTAGTCGAAATACGA+CGG | + | chr4_3:45236373-45236392 | Msa0642920:CDS | 35.0% |
| ATGTTGAATGACTATGTTGC+TGG | + | chr4_3:45236422-45236441 | Msa0642920:CDS | 35.0% | |
| TGTGCAATTCTTGAGAAATC+TGG | - | chr4_3:45236584-45236603 | None:intergenic | 35.0% | |
| TCTCAAGAATTGCACAACAA+TGG | + | chr4_3:45236588-45236607 | Msa0642920:CDS | 35.0% | |
| ! | TGATAATGTCCTACAATGTG+TGG | - | chr4_3:45236632-45236651 | None:intergenic | 35.0% |
| GAATTGTTGTGGCTTGAAAT+TGG | - | chr4_3:45236694-45236713 | None:intergenic | 35.0% | |
| AACAAGAGATGGAATTGTTG+TGG | - | chr4_3:45236705-45236724 | None:intergenic | 35.0% | |
| TCATTCTCACAAACAAGAGA+TGG | - | chr4_3:45236716-45236735 | None:intergenic | 35.0% | |
| ! | AAAGAGAGAGCTTTATGAAG+AGG | + | chr4_3:45236787-45236806 | Msa0642920:CDS | 35.0% |
| !!! | CACTTCCAATGGTTTTGTTT+TGG | - | chr4_3:45236823-45236842 | None:intergenic | 35.0% |
| CCAAACTTGATGAAAAGGTA+GGG | - | chr4_3:45236987-45237006 | None:intergenic | 35.0% | |
| ! | CCTACCTTTTCATCAAGTTT+GGG | + | chr4_3:45236985-45237004 | Msa0642920:CDS | 35.0% |
| TGGAAAGCTATAACGATTCA+CGG | + | chr4_3:45237053-45237072 | Msa0642920:CDS | 35.0% | |
| ACGGATAAGTTTCATAAGCT+CGG | + | chr4_3:45237072-45237091 | Msa0642920:CDS | 35.0% | |
| GTACTATGGAAGGTTTCAAA+TGG | + | chr4_3:45237108-45237127 | Msa0642920:CDS | 35.0% | |
| !! | GTTGATGATGATATGATACC+TGG | + | chr4_3:45237163-45237182 | Msa0642920:CDS | 35.0% |
| TCAATAGTGATATCATAGGC+AGG | - | chr4_3:45237352-45237371 | None:intergenic | 35.0% | |
| AGACAATATGATTGTACCTG+AGG | - | chr4_3:45237486-45237505 | None:intergenic | 35.0% | |
| !! | AAGTCATTGTTTGACTTGGA+TGG | - | chr4_3:45238175-45238194 | None:intergenic | 35.0% |
| ! | ACAAGTGTTTCTGAACCTAA+TGG | - | chr4_3:45238221-45238240 | None:intergenic | 35.0% |
| GACACTAGAGAAAAAGTCTT+TGG | - | chr4_3:45238278-45238297 | None:intergenic | 35.0% | |
| ! | TCTTTGTCTTTTGGATCTAC+TGG | - | chr4_3:45238685-45238704 | None:intergenic | 35.0% |
| CCAAAAGACAAAGAAACATG+GGG | + | chr4_3:45238691-45238710 | Msa0642920:CDS | 35.0% | |
| ATCTGGCTACATAACACAAT+GGG | + | chr4_3:45238910-45238929 | Msa0642920:CDS | 35.0% | |
| !!! | AGAGCGCATCTATTTTTTGA+GGG | - | chr4_3:45238946-45238965 | None:intergenic | 35.0% |
| !!! | AAGAGCGCATCTATTTTTTG+AGG | - | chr4_3:45238947-45238966 | None:intergenic | 35.0% |
| !!! | TTTTGGTTTGCAAAGAACGT+CGG | + | chr4_3:45239113-45239132 | Msa0642920:CDS | 35.0% |
| ! | AAGATCTTTGATTTAGGCGT+TGG | + | chr4_3:45239139-45239158 | Msa0642920:CDS | 35.0% |
| GAATACACTGCTTGTATAAC+TGG | - | chr4_3:45239196-45239215 | None:intergenic | 35.0% | |
| !! | AGCAGTGTATTCTAGTTTGA+AGG | + | chr4_3:45239204-45239223 | Msa0642920:CDS | 35.0% |
| !! | GCAGTGTATTCTAGTTTGAA+GGG | + | chr4_3:45239205-45239224 | Msa0642920:CDS | 35.0% |
| CCACAGTAATTACAACACTT+GGG | - | chr4_3:45239249-45239268 | None:intergenic | 35.0% | |
| TCCACAGTAATTACAACACT+TGG | - | chr4_3:45239250-45239269 | None:intergenic | 35.0% | |
| !!! | TACATTGGTTCTTTTGCCTA+GGG | + | chr4_3:45239333-45239352 | Msa0642920:CDS | 35.0% |
| ! | CTTCTGTGTCTAAAGTTCTT+TGG | + | chr4_3:45239356-45239375 | Msa0642920:CDS | 35.0% |
| ! | TGTGTCTAAAGTTCTTTGGA+TGG | + | chr4_3:45239360-45239379 | Msa0642920:CDS | 35.0% |
| GAACAAGCCAATTTGTCAAT+TGG | + | chr4_3:45239579-45239598 | Msa0642920:intron | 35.0% | |
| !! | TGAACCAACATTGGTTTAAC+CGG | - | chr4_3:45239657-45239676 | None:intergenic | 35.0% |
| ! | TGGTTTAATCGGTTTAATCG+TGG | - | chr4_3:45239681-45239700 | None:intergenic | 35.0% |
| ! | TCAAGATAGTGGTTAGAAGT+GGG | - | chr4_3:45239823-45239842 | None:intergenic | 35.0% |
| TAGTGATATGGTCAAGATAG+TGG | - | chr4_3:45239834-45239853 | None:intergenic | 35.0% | |
| ACTATCTTGACCATATCACT+AGG | + | chr4_3:45239833-45239852 | Msa0642920:intron | 35.0% | |
| TGTTAGAGATCCTAGTGATA+TGG | - | chr4_3:45239846-45239865 | None:intergenic | 35.0% | |
| AACTATTGTGCATTACTCCT+AGG | - | chr4_3:45239896-45239915 | None:intergenic | 35.0% | |
| TCAACATCATAACCCAAAAC+AGG | + | chr4_3:45239981-45240000 | Msa0642920:CDS | 35.0% | |
| CAACATCATAACCCAAAACA+GGG | + | chr4_3:45239982-45240001 | Msa0642920:CDS | 35.0% | |
| ACAGGGTAAATTCACTAACA+AGG | + | chr4_3:45239999-45240018 | Msa0642920:CDS | 35.0% | |
| CTATCCATGTTGAAAGTGAT+TGG | - | chr4_3:45240070-45240089 | None:intergenic | 35.0% | |
| GAAGCAACCATAAAACTAGT+AGG | + | chr4_3:45240100-45240119 | Msa0642920:CDS | 35.0% | |
| !! | CTTAGTGTTTTTGATCCATG+TGG | - | chr4_3:45240139-45240158 | None:intergenic | 35.0% |
| CTAAGAAGAAGAATCATCCA+AGG | + | chr4_3:45240154-45240173 | Msa0642920:CDS | 35.0% | |
| TCTCACCTTATTACTACCTA+TGG | + | chr4_3:45240260-45240279 | Msa0642920:CDS | 35.0% | |
| TGAGTGCATATTTGATCCAT+AGG | - | chr4_3:45240279-45240298 | None:intergenic | 35.0% | |
| ! | CAACAATTCTTGGTGTGTAT+AGG | - | chr4_3:45240354-45240373 | None:intergenic | 35.0% |
| TTGTCAAAGAAAGACCGAAA+TGG | + | chr4_3:45240377-45240396 | Msa0642920:CDS | 35.0% | |
| AATTGTGTCGCATTCCATTT+CGG | - | chr4_3:45240394-45240413 | None:intergenic | 35.0% | |
| CAAGGTAATTGATGAAGGTA+AGG | - | chr4_3:45240442-45240461 | None:intergenic | 35.0% | |
| CATCAATTACCTTGTAGTTG+GGG | + | chr4_3:45240448-45240467 | Msa0642920:CDS | 35.0% | |
| ! | CAGTGTTTTTCCCTAAACAT+TGG | + | chr4_3:45240473-45240492 | Msa0642920:CDS | 35.0% |
| TGAAGATGCTAAGAAAAACC+CGG | + | chr4_3:45240531-45240550 | Msa0642920:CDS | 35.0% | |
| !! | CTTGCTTGGTTTGGAAAATT+TGG | - | chr4_3:45240652-45240671 | None:intergenic | 35.0% |
| ! | GTTGAAAAACTTGCTTGGTT+TGG | - | chr4_3:45240661-45240680 | None:intergenic | 35.0% |
| ! | GGTTAGTTGAAAAACTTGCT+TGG | - | chr4_3:45240666-45240685 | None:intergenic | 35.0% |
| !! | AATCAGGCTGTTTCTCTTAA+GGG | + | chr4_3:45240841-45240860 | Msa0642920:CDS | 35.0% |
| GTCATTCAACATTCCATCCA+AGG | - | chr4_3:45236414-45236433 | None:intergenic | 40.0% | |
| !!! | TGTGCCTAATTTTTGAGGCT+TGG | - | chr4_3:45236459-45236478 | None:intergenic | 40.0% |
| ATGATCACACCACACATTGT+AGG | + | chr4_3:45236620-45236639 | Msa0642920:CDS | 40.0% | |
| ! | TTGAAGTGTCTCACTTCCAA+TGG | - | chr4_3:45236834-45236853 | None:intergenic | 40.0% |
| TGGACCTTTCAAATCCCATT+TGG | - | chr4_3:45236876-45236895 | None:intergenic | 40.0% | |
| ! | CCCTACCTTTTCATCAAGTT+TGG | + | chr4_3:45236984-45237003 | Msa0642920:CDS | 40.0% |
| CCCAAACTTGATGAAAAGGT+AGG | - | chr4_3:45236988-45237007 | None:intergenic | 40.0% | |
| AGCACCCAAACTTGATGAAA+AGG | - | chr4_3:45236992-45237011 | None:intergenic | 40.0% | |
| CGGATAAGTTTCATAAGCTC+GGG | + | chr4_3:45237073-45237092 | Msa0642920:CDS | 40.0% | |
| TTTGCAGACAGAAGCTGATT+TGG | + | chr4_3:45237132-45237151 | Msa0642920:CDS | 40.0% | |
| !! | AGATTTTGGCACATGTAGCT+GGG | + | chr4_3:45237200-45237219 | Msa0642920:CDS | 40.0% |
| ! | ACTCCTTTTACCTTCTCAAC+TGG | + | chr4_3:45237448-45237467 | Msa0642920:CDS | 40.0% |
| TCACCAGTTGAGAAGGTAAA+AGG | - | chr4_3:45237454-45237473 | None:intergenic | 40.0% | |
| CAAATCTTCACCAGTTGAGA+AGG | - | chr4_3:45237461-45237480 | None:intergenic | 40.0% | |
| AAATTATGGGGGTTCATGCA+TGG | - | chr4_3:45237610-45237629 | None:intergenic | 40.0% | |
| TGTCTGTGACAGGGTTTAAT+AGG | - | chr4_3:45238474-45238493 | None:intergenic | 40.0% | |
| TGTGAATGCAGTATCATGTC+CGG | - | chr4_3:45238497-45238516 | None:intergenic | 40.0% | |
| ! | TTTACATGTGTTGGTGCACT+AGG | + | chr4_3:45238538-45238557 | Msa0642920:intron | 40.0% |
| ! | TTACATGTGTTGGTGCACTA+GGG | + | chr4_3:45238539-45238558 | Msa0642920:intron | 40.0% |
| GGTTGAACGCTAAAACTTGT+CGG | + | chr4_3:45238560-45238579 | Msa0642920:intron | 40.0% | |
| ACACCAGAAACACATTCGAT+CGG | + | chr4_3:45238583-45238602 | Msa0642920:intron | 40.0% | |
| AATCCGATCGAATGTGTTTC+TGG | - | chr4_3:45238589-45238608 | None:intergenic | 40.0% | |
| ! | CCCCATGTTTCTTTGTCTTT+TGG | - | chr4_3:45238694-45238713 | None:intergenic | 40.0% |
| ! | TTCAAGTTCGCGATGATCAA+TGG | + | chr4_3:45238873-45238892 | Msa0642920:CDS | 40.0% |
| CATCTGGCTACATAACACAA+TGG | + | chr4_3:45238909-45238928 | Msa0642920:CDS | 40.0% | |
| AAAGCATACATTGTTGTCCC+TGG | + | chr4_3:45239040-45239059 | Msa0642920:CDS | 40.0% | |
| AAGGACAGAAATTTCCACCA+GGG | - | chr4_3:45239060-45239079 | None:intergenic | 40.0% | |
| CGTTCTTTGCAAACCAAAAG+AGG | - | chr4_3:45239112-45239131 | None:intergenic | 40.0% | |
| !! | TTAGGCGTTGGTTCAATTTC+CGG | + | chr4_3:45239151-45239170 | Msa0642920:CDS | 40.0% |
| ! | CCCAAGTGTTGTAATTACTG+TGG | + | chr4_3:45239246-45239265 | Msa0642920:CDS | 40.0% |
| !! | TGTGAGAAAGGCTTTGAAGA+TGG | + | chr4_3:45239285-45239304 | Msa0642920:CDS | 40.0% |
| !!! | CTACATTGGTTCTTTTGCCT+AGG | + | chr4_3:45239332-45239351 | Msa0642920:CDS | 40.0% |
| !! | TGGCTTGTTCCTGATTTAAC+CGG | - | chr4_3:45239569-45239588 | None:intergenic | 40.0% |
| !! | ACTCTAAAGTCCGGTTGAAA+CGG | + | chr4_3:45239615-45239634 | Msa0642920:intron | 40.0% |
| TGAACCGGTTAAACCAATGT+TGG | + | chr4_3:45239650-45239669 | Msa0642920:intron | 40.0% | |
| AATCGTGGTTGAACCAACAT+TGG | - | chr4_3:45239666-45239685 | None:intergenic | 40.0% | |
| ! | GTCAAGATAGTGGTTAGAAG+TGG | - | chr4_3:45239824-45239843 | None:intergenic | 40.0% |
| ATCTCCTAGATAGTAGGCAT+TGG | - | chr4_3:45240041-45240060 | None:intergenic | 40.0% | |
| AGAAGAAGAATCATCCAAGG+TGG | + | chr4_3:45240157-45240176 | Msa0642920:CDS | 40.0% | |
| TAAGAGCAGTGAGTGAAAGT+TGG | + | chr4_3:45240185-45240204 | Msa0642920:CDS | 40.0% | |
| CCAAAGTTGTCATCTGAAGA+TGG | - | chr4_3:45240214-45240233 | None:intergenic | 40.0% | |
| CCATCTTCAGATGACAACTT+TGG | + | chr4_3:45240211-45240230 | Msa0642920:CDS | 40.0% | |
| TGATGAAGGTAAGGTGTGTT+TGG | - | chr4_3:45240433-45240452 | None:intergenic | 40.0% | |
| TCAACTAACCATATGGAACC+AGG | + | chr4_3:45240676-45240695 | Msa0642920:CDS | 40.0% | |
| TTTGCACTAATATGTGCACC+TGG | - | chr4_3:45240697-45240716 | None:intergenic | 40.0% | |
| !!! | TTTTGAGGTGCCATTGTTGA+AGG | + | chr4_3:45240747-45240766 | Msa0642920:CDS | 40.0% |
| GATGGTAATCTTGAAGCTGA+AGG | - | chr4_3:45240808-45240827 | None:intergenic | 40.0% | |
| GAGAAACAGCCTGATTGAAA+AGG | - | chr4_3:45240837-45240856 | None:intergenic | 40.0% | |
| !! | CAATCAGGCTGTTTCTCTTA+AGG | + | chr4_3:45240840-45240859 | Msa0642920:CDS | 40.0% |
| ! | GTTGCTGTTGATCATCATAC+TGG | + | chr4_3:45240928-45240947 | Msa0642920:CDS | 40.0% |
| AGAAGTGGAGATTCCTTGGA+TGG | + | chr4_3:45236398-45236417 | Msa0642920:CDS | 45.0% | |
| !! | AGGTAGGGTTTGTTGAAGCA+AGG | - | chr4_3:45236972-45236991 | None:intergenic | 45.0% |
| CAAGTTTGGGTGCTTTCGTT+CGG | + | chr4_3:45236998-45237017 | Msa0642920:CDS | 45.0% | |
| AAGTTTGGGTGCTTTCGTTC+GGG | + | chr4_3:45236999-45237018 | Msa0642920:CDS | 45.0% | |
| GCTTTCCACGATTCTCTTGA+GGG | - | chr4_3:45237041-45237060 | None:intergenic | 45.0% | |
| AGCTTTCCACGATTCTCTTG+AGG | - | chr4_3:45237042-45237061 | None:intergenic | 45.0% | |
| !! | GAGATTTTGGCACATGTAGC+TGG | + | chr4_3:45237199-45237218 | Msa0642920:CDS | 45.0% |
| !!! | CAGTTTTGGGAAGTATTGGG+AGG | + | chr4_3:45237242-45237261 | Msa0642920:CDS | 45.0% |
| GTGATATCATAGGCAGGATC+AGG | - | chr4_3:45237346-45237365 | None:intergenic | 45.0% | |
| GTGCTCAACTAGTTGCCATT+AGG | + | chr4_3:45238203-45238222 | Msa0642920:intron | 45.0% | |
| TTAAACCCTGTCACAGACAC+CGG | + | chr4_3:45238475-45238494 | Msa0642920:intron | 45.0% | |
| AAGTTCGCGATGATCAATGG+TGG | + | chr4_3:45238876-45238895 | Msa0642920:CDS | 45.0% | |
| !! | TGGTGGAAAGCACTTTCATC+TGG | + | chr4_3:45238893-45238912 | Msa0642920:CDS | 45.0% |
| CAAGGACAGAAATTTCCACC+AGG | - | chr4_3:45239061-45239080 | None:intergenic | 45.0% | |
| ! | AGCTCTCAAATGGCCTCTTT+TGG | + | chr4_3:45239096-45239115 | Msa0642920:CDS | 45.0% |
| !! | TAGGCGTTGGTTCAATTTCC+GGG | + | chr4_3:45239152-45239171 | Msa0642920:CDS | 45.0% |
| ACTTTAGACACAGAAGCCCT+AGG | - | chr4_3:45239352-45239371 | None:intergenic | 45.0% | |
| !! | ATCCCGAGTACTCTAAAGTC+CGG | + | chr4_3:45239606-45239625 | Msa0642920:intron | 45.0% |
| !! | AACCGGACTTTAGAGTACTC+GGG | - | chr4_3:45239611-45239630 | None:intergenic | 45.0% |
| !! | CAACCGGACTTTAGAGTACT+CGG | - | chr4_3:45239612-45239631 | None:intergenic | 45.0% |
| CTTGTACAGTCCGTTTCAAC+CGG | - | chr4_3:45239628-45239647 | None:intergenic | 45.0% | |
| !! | GGGAGCATGAGCTTTCTTTT+GGG | - | chr4_3:45239803-45239822 | None:intergenic | 45.0% |
| !! | TGGGAGCATGAGCTTTCTTT+TGG | - | chr4_3:45239804-45239823 | None:intergenic | 45.0% |
| CTCACCAATGCCTACTATCT+AGG | + | chr4_3:45240034-45240053 | Msa0642920:CDS | 45.0% | |
| GGTTCATTTGAATGGCCACA+TGG | + | chr4_3:45240121-45240140 | Msa0642920:CDS | 45.0% | |
| GAGAGACTTGAGGGTCATAA+TGG | - | chr4_3:45240309-45240328 | None:intergenic | 45.0% | |
| ! | TCTTGGTGTGTATAGGGAGA+TGG | - | chr4_3:45240347-45240366 | None:intergenic | 45.0% |
| GAAGGTAAGGTGTGTTTGGA+TGG | - | chr4_3:45240429-45240448 | None:intergenic | 45.0% | |
| CAAATGGTTGGCAAGCTTCA+TGG | + | chr4_3:45240575-45240594 | Msa0642920:CDS | 45.0% | |
| TATGTGCACCTGGTTCCATA+TGG | - | chr4_3:45240687-45240706 | None:intergenic | 45.0% | |
| !!! | GCTGAAGGCATTTTCATTCC+AGG | - | chr4_3:45240793-45240812 | None:intergenic | 45.0% |
| CTTAAGGGACTTAAAGCTGC+TGG | + | chr4_3:45240856-45240875 | Msa0642920:CDS | 45.0% | |
| ! | TAAAGCTGCTGGTGCTAAGT+TGG | + | chr4_3:45240867-45240886 | Msa0642920:CDS | 45.0% |
| ! | AAAGCTGCTGGTGCTAAGTT+GGG | + | chr4_3:45240868-45240887 | Msa0642920:CDS | 45.0% |
| CAGAATCTTGAGCAGTGATG+AGG | - | chr4_3:45240958-45240977 | None:intergenic | 45.0% | |
| !! | AAAAAAATATTATCATAAAA+TGG | - | chr4_3:45237545-45237564 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTTAACAAAAAT+TGG | + | chr4_3:45237556-45237575 | Msa0642920:intron | 5.0% |
| !! | ATATATAAAATAAAATTATG+GGG | - | chr4_3:45237622-45237641 | None:intergenic | 5.0% |
| !! | GTATATATAAAATAAAATTA+TGG | - | chr4_3:45237624-45237643 | None:intergenic | 5.0% |
| CTGGTGAAGATTTGCACCTC+AGG | + | chr4_3:45237467-45237486 | Msa0642920:CDS | 50.0% | |
| GCATACATTGTTGTCCCTGG+TGG | + | chr4_3:45239043-45239062 | Msa0642920:CDS | 50.0% | |
| AAGCTGCAGCAGCTCTCAAA+TGG | + | chr4_3:45239086-45239105 | Msa0642920:CDS | 50.0% | |
| !! | AGGCGTTGGTTCAATTTCCG+GGG | + | chr4_3:45239153-45239172 | Msa0642920:CDS | 50.0% |
| !! | CGGTTGAAACGGACTGTACA+AGG | + | chr4_3:45239626-45239645 | Msa0642920:intron | 50.0% |
| CGGACTGTACAAGGTTGAAC+CGG | + | chr4_3:45239635-45239654 | Msa0642920:intron | 50.0% | |
| CTGCTCTTATGAGTCCACCT+TGG | - | chr4_3:45240174-45240193 | None:intergenic | 50.0% | |
| !! | GTTCTGGGAGAGAGACTTGA+GGG | - | chr4_3:45240318-45240337 | None:intergenic | 50.0% |
| !! | AGTTCTGGGAGAGAGACTTG+AGG | - | chr4_3:45240319-45240338 | None:intergenic | 50.0% |
| GGGAGATGGAAGAGAGTTCT+GGG | - | chr4_3:45240333-45240352 | None:intergenic | 50.0% | |
| AGGGAGATGGAAGAGAGTTC+TGG | - | chr4_3:45240334-45240353 | None:intergenic | 50.0% | |
| AACACTGCTCCCCAACTACA+AGG | - | chr4_3:45240460-45240479 | None:intergenic | 50.0% | |
| CGAAATACGACGGCGAGAAG+TGG | + | chr4_3:45236383-45236402 | Msa0642920:CDS | 55.0% | |
| GGCGAGAAGTGGAGATTCCT+TGG | + | chr4_3:45236394-45236413 | Msa0642920:CDS | 55.0% | |
| TTCGTTCGGGAGTCCAAACG+AGG | + | chr4_3:45237012-45237031 | Msa0642920:CDS | 55.0% | |
| GGGTTCATGCATGGCACCTA+TGG | - | chr4_3:45237601-45237620 | None:intergenic | 55.0% | |
| CATGTCCGGTGTCTGTGACA+GGG | - | chr4_3:45238483-45238502 | None:intergenic | 55.0% | |
| TCATGTCCGGTGTCTGTGAC+AGG | - | chr4_3:45238484-45238503 | None:intergenic | 55.0% | |
| ! | GCTGCTGCAGCTTGTTCACA+AGG | - | chr4_3:45239079-45239098 | None:intergenic | 55.0% |
| ! | TGCTGGTGCTAAGTTGGGAC+AGG | + | chr4_3:45240873-45240892 | Msa0642920:CDS | 55.0% |
| CTCTTGAGGGACGCCTCGTT+TGG | - | chr4_3:45237028-45237047 | None:intergenic | 60.0% | |
| GGCGTCCCTCAAGAGAATCG+TGG | + | chr4_3:45237033-45237052 | Msa0642920:CDS | 60.0% | |
| !! | TTCCGGGGTGTCGAACTCTG+AGG | + | chr4_3:45239168-45239187 | Msa0642920:CDS | 60.0% |
| TGCCTCAGAGTTCGACACCC+CGG | - | chr4_3:45239173-45239192 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 45236371 | 45240978 | 45236371 | ID=Msa0642920;Name=Msa0642920 |
| chr4_3 | mRNA | 45236371 | 45240978 | 45236371 | ID=Msa0642920-mRNA-1;Parent=Msa0642920;Name=Msa0642920-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|924 |
| chr4_3 | exon | 45236371 | 45237488 | 45236371 | ID=Msa0642920-mRNA-1:exon:10383;Parent=Msa0642920-mRNA-1 |
| chr4_3 | exon | 45238639 | 45238718 | 45238639 | ID=Msa0642920-mRNA-1:exon:10384;Parent=Msa0642920-mRNA-1 |
| chr4_3 | exon | 45238855 | 45239409 | 45238855 | ID=Msa0642920-mRNA-1:exon:10385;Parent=Msa0642920-mRNA-1 |
| chr4_3 | exon | 45239957 | 45240978 | 45239957 | ID=Msa0642920-mRNA-1:exon:10386;Parent=Msa0642920-mRNA-1 |
| chr4_3 | CDS | 45236371 | 45237488 | 45236371 | ID=Msa0642920-mRNA-1:cds;Parent=Msa0642920-mRNA-1 |
| chr4_3 | CDS | 45238639 | 45238718 | 45238639 | ID=Msa0642920-mRNA-1:cds;Parent=Msa0642920-mRNA-1 |
| chr4_3 | CDS | 45238855 | 45239409 | 45238855 | ID=Msa0642920-mRNA-1:cds;Parent=Msa0642920-mRNA-1 |
| chr4_3 | CDS | 45239957 | 45240978 | 45239957 | ID=Msa0642920-mRNA-1:cds;Parent=Msa0642920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
