Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547060 | XP_024638377.1 | 95.890 | 949 | 28 | 1 | 26 | 963 | 2 | 950 | 0.0 | 1894 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547060 | G7JND6 | 96.047 | 936 | 26 | 1 | 39 | 963 | 1 | 936 | 0.0 | 1869 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa0547060 | 0.804762 | 1.848849e-49 | -8.615850e-47 |
| Msa0004180 | Msa0547060 | -0.804325 | 2.280747e-49 | -8.615850e-47 |
| Msa0026420 | Msa0547060 | 0.822740 | 2.015464e-53 | -8.615850e-47 |
| Msa0027020 | Msa0547060 | -0.842594 | 2.351221e-58 | -8.615850e-47 |
| Msa0033190 | Msa0547060 | -0.811906 | 5.537343e-51 | -8.615850e-47 |
| Msa0033970 | Msa0547060 | 0.815695 | 8.105159e-52 | -8.615850e-47 |
| Msa0037280 | Msa0547060 | 0.822156 | 2.754496e-53 | -8.615850e-47 |
| Msa0037720 | Msa0547060 | 0.803044 | 4.206356e-49 | -8.615850e-47 |
| Msa0039890 | Msa0547060 | 0.880751 | 4.238950e-70 | -8.615850e-47 |
| Msa0042520 | Msa0547060 | -0.809079 | 2.259598e-50 | -8.615850e-47 |
| Msa0046020 | Msa0547060 | -0.803498 | 3.387685e-49 | -8.615850e-47 |
| Msa0051480 | Msa0547060 | 0.805066 | 1.597388e-49 | -8.615850e-47 |
| Msa0052780 | Msa0547060 | 0.821094 | 4.847632e-53 | -8.615850e-47 |
| Msa0069150 | Msa0547060 | -0.816909 | 4.336307e-52 | -8.615850e-47 |
| Msa0074860 | Msa0547060 | -0.837330 | 5.540288e-57 | -8.615850e-47 |
| Msa0079840 | Msa0547060 | -0.813108 | 3.024268e-51 | -8.615850e-47 |
| Msa0082290 | Msa0547060 | 0.801045 | 1.083817e-48 | -8.615850e-47 |
| Msa0087550 | Msa0547060 | 0.904437 | 1.228521e-79 | -8.615850e-47 |
| Msa0093360 | Msa0547060 | -0.805908 | 1.063676e-49 | -8.615850e-47 |
| Msa0097570 | Msa0547060 | 0.815632 | 8.371082e-52 | -8.615850e-47 |
| Msa0127910 | Msa0547060 | -0.806974 | 6.338605e-50 | -8.615850e-47 |
| Msa0128030 | Msa0547060 | 0.817951 | 2.526432e-52 | -8.615850e-47 |
| Msa0129640 | Msa0547060 | 0.827939 | 1.185662e-54 | -8.615850e-47 |
| Msa0134270 | Msa0547060 | 0.899305 | 2.259649e-77 | -8.615850e-47 |
| Msa0138340 | Msa0547060 | -0.818007 | 2.453483e-52 | -8.615850e-47 |
| Msa0141410 | Msa0547060 | 0.813564 | 2.400792e-51 | -8.615850e-47 |
| Msa0143640 | Msa0547060 | 0.830447 | 2.921282e-55 | -8.615850e-47 |
| Msa0146200 | Msa0547060 | 0.803567 | 3.277728e-49 | -8.615850e-47 |
| Msa0147960 | Msa0547060 | -0.818508 | 1.890228e-52 | -8.615850e-47 |
| Msa0150620 | Msa0547060 | 0.821913 | 3.136201e-53 | -8.615850e-47 |
| Msa0158270 | Msa0547060 | 0.814502 | 1.491477e-51 | -8.615850e-47 |
| Msa0159240 | Msa0547060 | -0.823797 | 1.141414e-53 | -8.615850e-47 |
| Msa0167160 | Msa0547060 | -0.842138 | 3.104915e-58 | -8.615850e-47 |
| Msa0180820 | Msa0547060 | 0.876751 | 1.088493e-68 | -8.615850e-47 |
| Msa0186240 | Msa0547060 | 0.813805 | 2.124787e-51 | -8.615850e-47 |
| Msa0216150 | Msa0547060 | -0.806635 | 7.475933e-50 | -8.615850e-47 |
| Msa0224210 | Msa0547060 | 0.823977 | 1.035874e-53 | -8.615850e-47 |
| Msa0225080 | Msa0547060 | -0.801527 | 8.633584e-49 | -8.615850e-47 |
| Msa0225280 | Msa0547060 | -0.817874 | 2.629373e-52 | -8.615850e-47 |
| Msa0232160 | Msa0547060 | -0.815768 | 7.807331e-52 | -8.615850e-47 |
| Msa0238140 | Msa0547060 | 0.804309 | 2.298415e-49 | -8.615850e-47 |
| Msa0366810 | Msa0547060 | 0.801005 | 1.104026e-48 | -8.615850e-47 |
| Msa0368620 | Msa0547060 | 0.840748 | 7.211480e-58 | -8.615850e-47 |
| Msa0369990 | Msa0547060 | 0.821305 | 4.333711e-53 | -8.615850e-47 |
| Msa0378320 | Msa0547060 | 0.814555 | 1.451606e-51 | -8.615850e-47 |
| Msa0382020 | Msa0547060 | -0.809529 | 1.808660e-50 | -8.615850e-47 |
| Msa0389710 | Msa0547060 | 0.838213 | 3.285942e-57 | -8.615850e-47 |
| Msa0390590 | Msa0547060 | -0.808567 | 2.906422e-50 | -8.615850e-47 |
| Msa0390790 | Msa0547060 | 0.826136 | 3.201279e-54 | -8.615850e-47 |
| Msa0393100 | Msa0547060 | 0.823257 | 1.526376e-53 | -8.615850e-47 |
| Msa0402800 | Msa0547060 | 0.829372 | 5.342395e-55 | -8.615850e-47 |
| Msa0403740 | Msa0547060 | -0.805096 | 1.574268e-49 | -8.615850e-47 |
| Msa0405200 | Msa0547060 | 0.823125 | 1.638875e-53 | -8.615850e-47 |
| Msa0415760 | Msa0547060 | -0.819443 | 1.158137e-52 | -8.615850e-47 |
| Msa0416040 | Msa0547060 | 0.817293 | 3.554904e-52 | -8.615850e-47 |
| Msa0419150 | Msa0547060 | -0.804967 | 1.675021e-49 | -8.615850e-47 |
| Msa0427230 | Msa0547060 | -0.815012 | 1.149340e-51 | -8.615850e-47 |
| Msa0427560 | Msa0547060 | 0.839646 | 1.399028e-57 | -8.615850e-47 |
| Msa0427660 | Msa0547060 | 0.816088 | 6.623082e-52 | -8.615850e-47 |
| Msa0428720 | Msa0547060 | -0.807419 | 5.101178e-50 | -8.615850e-47 |
| Msa0431270 | Msa0547060 | -0.805205 | 1.493536e-49 | -8.615850e-47 |
| Msa0432490 | Msa0547060 | -0.801644 | 8.167769e-49 | -8.615850e-47 |
| Msa0434830 | Msa0547060 | -0.804522 | 2.075004e-49 | -8.615850e-47 |
| Msa0437820 | Msa0547060 | -0.804353 | 2.250254e-49 | -8.615850e-47 |
| Msa0438070 | Msa0547060 | 0.801929 | 7.140402e-49 | -8.615850e-47 |
| Msa0449490 | Msa0547060 | 0.803641 | 3.163459e-49 | -8.615850e-47 |
| Msa0449500 | Msa0547060 | 0.826198 | 3.094287e-54 | -8.615850e-47 |
| Msa0449620 | Msa0547060 | 0.812832 | 3.477006e-51 | -8.615850e-47 |
| Msa0450920 | Msa0547060 | -0.808610 | 2.846686e-50 | -8.615850e-47 |
| Msa0456450 | Msa0547060 | -0.803408 | 3.535792e-49 | -8.615850e-47 |
| Msa0459150 | Msa0547060 | 0.805034 | 1.621794e-49 | -8.615850e-47 |
| Msa0460510 | Msa0547060 | -0.811803 | 5.831362e-51 | -8.615850e-47 |
| Msa0463030 | Msa0547060 | -0.800975 | 1.119645e-48 | -8.615850e-47 |
| Msa0464360 | Msa0547060 | 0.816784 | 4.626017e-52 | -8.615850e-47 |
| Msa0464980 | Msa0547060 | -0.806540 | 7.828058e-50 | -8.615850e-47 |
| Msa0473740 | Msa0547060 | -0.816006 | 6.908708e-52 | -8.615850e-47 |
| Msa0476600 | Msa0547060 | -0.812395 | 4.332373e-51 | -8.615850e-47 |
| Msa0478080 | Msa0547060 | 0.825177 | 5.404165e-54 | -8.615850e-47 |
| Msa0480260 | Msa0547060 | 0.834539 | 2.827807e-56 | -8.615850e-47 |
| Msa0480530 | Msa0547060 | 0.823993 | 1.026722e-53 | -8.615850e-47 |
| Msa0480540 | Msa0547060 | 0.830744 | 2.472137e-55 | -8.615850e-47 |
| Msa0480550 | Msa0547060 | 0.830742 | 2.474420e-55 | -8.615850e-47 |
| Msa0481770 | Msa0547060 | 0.815702 | 8.073288e-52 | -8.615850e-47 |
| Msa0240630 | Msa0547060 | -0.810139 | 1.337273e-50 | -8.615850e-47 |
| Msa0246140 | Msa0547060 | 0.842603 | 2.338159e-58 | -8.615850e-47 |
| Msa0254640 | Msa0547060 | 0.876453 | 1.380220e-68 | -8.615850e-47 |
| Msa0259770 | Msa0547060 | -0.808197 | 3.485453e-50 | -8.615850e-47 |
| Msa0265480 | Msa0547060 | 0.822679 | 2.082548e-53 | -8.615850e-47 |
| Msa0266330 | Msa0547060 | -0.810213 | 1.288899e-50 | -8.615850e-47 |
| Msa0267700 | Msa0547060 | 0.808659 | 2.777954e-50 | -8.615850e-47 |
| Msa0269710 | Msa0547060 | 0.824555 | 7.575830e-54 | -8.615850e-47 |
| Msa0275730 | Msa0547060 | 0.801399 | 9.171003e-49 | -8.615850e-47 |
| Msa0284730 | Msa0547060 | 0.860802 | 1.601905e-63 | -8.615850e-47 |
| Msa0306310 | Msa0547060 | 0.828152 | 1.053591e-54 | -8.615850e-47 |
| Msa0310270 | Msa0547060 | -0.831758 | 1.392502e-55 | -8.615850e-47 |
| Msa0319680 | Msa0547060 | 0.867250 | 1.572186e-65 | -8.615850e-47 |
| Msa0332360 | Msa0547060 | 0.833040 | 6.699876e-56 | -8.615850e-47 |
| Msa0340370 | Msa0547060 | 0.828625 | 8.103888e-55 | -8.615850e-47 |
| Msa0341950 | Msa0547060 | -0.806938 | 6.450201e-50 | -8.615850e-47 |
| Msa0345050 | Msa0547060 | 0.808107 | 3.644207e-50 | -8.615850e-47 |
| Msa0345890 | Msa0547060 | 0.817377 | 3.402831e-52 | -8.615850e-47 |
| Msa0355630 | Msa0547060 | -0.803710 | 3.060786e-49 | -8.615850e-47 |
| Msa0358750 | Msa0547060 | -0.814206 | 1.733540e-51 | -8.615850e-47 |
| Msa0364030 | Msa0547060 | -0.804634 | 1.966080e-49 | -8.615850e-47 |
| Msa0488580 | Msa0547060 | 0.820622 | 6.224175e-53 | -8.615850e-47 |
| Msa0492330 | Msa0547060 | -0.804297 | 2.311860e-49 | -8.615850e-47 |
| Msa0497680 | Msa0547060 | 0.831153 | 1.961114e-55 | -8.615850e-47 |
| Msa0497690 | Msa0547060 | 0.801437 | 9.007791e-49 | -8.615850e-47 |
| Msa0497860 | Msa0547060 | 0.824804 | 6.619234e-54 | -8.615850e-47 |
| Msa0498250 | Msa0547060 | -0.800991 | 1.111584e-48 | -8.615850e-47 |
| Msa0500580 | Msa0547060 | -0.803277 | 3.764430e-49 | -8.615850e-47 |
| Msa0500910 | Msa0547060 | 0.801282 | 9.690486e-49 | -8.615850e-47 |
| Msa0505640 | Msa0547060 | 0.810086 | 1.373032e-50 | -8.615850e-47 |
| Msa0506370 | Msa0547060 | 0.838752 | 2.385699e-57 | -8.615850e-47 |
| Msa0508160 | Msa0547060 | 0.853475 | 2.331677e-61 | -8.615850e-47 |
| Msa0510870 | Msa0547060 | 0.814031 | 1.894605e-51 | -8.615850e-47 |
| Msa0518190 | Msa0547060 | 0.831801 | 1.358684e-55 | -8.615850e-47 |
| Msa0518490 | Msa0547060 | 0.808412 | 3.136907e-50 | -8.615850e-47 |
| Msa0521260 | Msa0547060 | -0.804934 | 1.701975e-49 | -8.615850e-47 |
| Msa0522170 | Msa0547060 | 0.814627 | 1.399137e-51 | -8.615850e-47 |
| Msa0527210 | Msa0547060 | -0.821300 | 4.344403e-53 | -8.615850e-47 |
| Msa0531050 | Msa0547060 | 0.816238 | 6.130271e-52 | -8.615850e-47 |
| Msa0532870 | Msa0547060 | -0.806571 | 7.712096e-50 | -8.615850e-47 |
| Msa0538050 | Msa0547060 | -0.804645 | 1.956087e-49 | -8.615850e-47 |
| Msa0547060 | Msa0550980 | -0.816886 | 4.388248e-52 | -8.615850e-47 |
| Msa0547060 | Msa0557440 | -0.815339 | 9.726494e-52 | -8.615850e-47 |
| Msa0547060 | Msa0560280 | 0.851743 | 7.276175e-61 | -8.615850e-47 |
| Msa0547060 | Msa0565180 | 0.837487 | 5.049797e-57 | -8.615850e-47 |
| Msa0547060 | Msa0567190 | -0.815760 | 7.835653e-52 | -8.615850e-47 |
| Msa0547060 | Msa0572730 | -0.817552 | 3.108923e-52 | -8.615850e-47 |
| Msa0547060 | Msa0573950 | 0.829940 | 3.885108e-55 | -8.615850e-47 |
| Msa0547060 | Msa0580840 | 0.837977 | 3.779409e-57 | -8.615850e-47 |
| Msa0547060 | Msa0580890 | -0.818725 | 1.687110e-52 | -8.615850e-47 |
| Msa0547060 | Msa0583270 | -0.814582 | 1.431815e-51 | -8.615850e-47 |
| Msa0547060 | Msa0585720 | -0.806155 | 9.437250e-50 | -8.615850e-47 |
| Msa0547060 | Msa0597370 | -0.805800 | 1.120475e-49 | -8.615850e-47 |
| Msa0547060 | Msa0601790 | 0.910986 | 1.012805e-82 | -8.615850e-47 |
| Msa0547060 | Msa0605150 | -0.801958 | 7.043941e-49 | -8.615850e-47 |
| Msa0547060 | Msa0606340 | -0.809521 | 1.816344e-50 | -8.615850e-47 |
| Msa0547060 | Msa0614290 | 0.846746 | 1.789178e-59 | -8.615850e-47 |
| Msa0547060 | Msa0615070 | 0.819313 | 1.240274e-52 | -8.615850e-47 |
| Msa0547060 | Msa0616890 | -0.802744 | 4.851074e-49 | -8.615850e-47 |
| Msa0547060 | Msa0628880 | 0.807401 | 5.145854e-50 | -8.615850e-47 |
| Msa0547060 | Msa0638810 | 0.822048 | 2.918044e-53 | -8.615850e-47 |
| Msa0547060 | Msa0638820 | 0.827375 | 1.619492e-54 | -8.615850e-47 |
| Msa0547060 | Msa0639530 | -0.825378 | 4.844297e-54 | -8.615850e-47 |
| Msa0547060 | Msa0642920 | 0.953463 | 2.596603e-111 | -8.615850e-47 |
| Msa0547060 | Msa0645480 | 0.801689 | 7.996413e-49 | -8.615850e-47 |
| Msa0547060 | Msa0651130 | 0.811116 | 8.224471e-51 | -8.615850e-47 |
| Msa0547060 | Msa0657340 | 0.831770 | 1.382677e-55 | -8.615850e-47 |
| Msa0547060 | Msa0660650 | 0.846554 | 2.019674e-59 | -8.615850e-47 |
| Msa0547060 | Msa0661540 | -0.800126 | 1.668420e-48 | -8.615850e-47 |
| Msa0547060 | Msa0663580 | -0.801467 | 8.882165e-49 | -8.615850e-47 |
| Msa0547060 | Msa0663690 | -0.800748 | 1.246234e-48 | -8.615850e-47 |
| Msa0547060 | Msa0667670 | -0.823030 | 1.724393e-53 | -8.615850e-47 |
| Msa0547060 | Msa0672950 | 0.806405 | 8.357717e-50 | -8.615850e-47 |
| Msa0547060 | Msa0672980 | 0.810894 | 9.187278e-51 | -8.615850e-47 |
| Msa0547060 | Msa0690100 | -0.810880 | 9.250546e-51 | -8.615850e-47 |
| Msa0547060 | Msa0693750 | 0.800846 | 1.190095e-48 | -8.615850e-47 |
| Msa0547060 | Msa0695140 | 0.810619 | 1.053512e-50 | -8.615850e-47 |
| Msa0547060 | Msa0695250 | -0.818656 | 1.749214e-52 | -8.615850e-47 |
| Msa0547060 | Msa0697510 | 0.841389 | 4.893823e-58 | -8.615850e-47 |
| Msa0547060 | Msa0697520 | 0.828180 | 1.037238e-54 | -8.615850e-47 |
| Msa0547060 | Msa0698110 | 0.818334 | 2.069900e-52 | -8.615850e-47 |
| Msa0547060 | Msa0701430 | 0.815826 | 7.578103e-52 | -8.615850e-47 |
| Msa0547060 | Msa0704790 | -0.800286 | 1.547664e-48 | -8.615850e-47 |
| Msa0547060 | Msa0713060 | 0.805860 | 1.088539e-49 | -8.615850e-47 |
| Msa0547060 | Msa0713570 | -0.808822 | 2.564111e-50 | -8.615850e-47 |
| Msa0547060 | Msa0727230 | 0.811922 | 5.494792e-51 | -8.615850e-47 |
| Msa0547060 | Msa0744540 | 0.822380 | 2.443623e-53 | -8.615850e-47 |
| Msa0547060 | Msa0744550 | 0.830201 | 3.356507e-55 | -8.615850e-47 |
| Msa0547060 | Msa0744560 | 0.829197 | 5.889437e-55 | -8.615850e-47 |
| Msa0547060 | Msa0755550 | -0.805634 | 1.214339e-49 | -8.615850e-47 |
| Msa0547060 | Msa0758880 | -0.800548 | 1.368735e-48 | -8.615850e-47 |
| Msa0547060 | Msa0793130 | -0.802594 | 5.208741e-49 | -8.615850e-47 |
| Msa0547060 | Msa0793270 | 0.813613 | 2.343023e-51 | -8.615850e-47 |
| Msa0547060 | Msa0794900 | -0.805931 | 1.051880e-49 | -8.615850e-47 |
| Msa0547060 | Msa0795320 | 0.842088 | 3.200466e-58 | -8.615850e-47 |
| Msa0547060 | Msa0797180 | -0.803439 | 3.484220e-49 | -8.615850e-47 |
| Msa0547060 | Msa0816630 | 0.852045 | 5.972162e-61 | -8.615850e-47 |
| Msa0547060 | Msa0826360 | 0.802215 | 6.235322e-49 | -8.615850e-47 |
| Msa0547060 | Msa0826370 | 0.804391 | 2.209045e-49 | -8.615850e-47 |
| Msa0547060 | Msa0826380 | 0.809206 | 2.121446e-50 | -8.615850e-47 |
| Msa0547060 | Msa0826450 | 0.819239 | 1.288889e-52 | -8.615850e-47 |
| Msa0547060 | Msa0826820 | -0.809970 | 1.454153e-50 | -8.615850e-47 |
| Msa0547060 | Msa0829250 | -0.803529 | 3.338372e-49 | -8.615850e-47 |
| Msa0547060 | Msa0835050 | -0.808910 | 2.454980e-50 | -8.615850e-47 |
| Msa0547060 | Msa0858170 | 0.809106 | 2.229095e-50 | -8.615850e-47 |
| Msa0547060 | Msa0863940 | 0.847793 | 9.233381e-60 | -8.615850e-47 |
| Msa0547060 | Msa0865500 | -0.801205 | 1.005169e-48 | -8.615850e-47 |
| Msa0547060 | Msa0865810 | 0.820843 | 5.535588e-53 | -8.615850e-47 |
| Msa0547060 | Msa0865820 | 0.806753 | 7.057947e-50 | -8.615850e-47 |
| Msa0547060 | Msa0865830 | 0.816612 | 5.054853e-52 | -8.615850e-47 |
| Msa0547060 | Msa0867470 | 0.805396 | 1.362460e-49 | -8.615850e-47 |
| Msa0547060 | Msa0873910 | 0.818154 | 2.273026e-52 | -8.615850e-47 |
| Msa0547060 | Msa0874750 | 0.816294 | 5.954639e-52 | -8.615850e-47 |
| Msa0547060 | Msa0888520 | -0.803054 | 4.186503e-49 | -8.615850e-47 |
| Msa0547060 | Msa0906680 | 0.817490 | 3.209108e-52 | -8.615850e-47 |
| Msa0547060 | Msa0921790 | 0.814148 | 1.785097e-51 | -8.615850e-47 |
| Msa0547060 | Msa0945160 | -0.812349 | 4.433325e-51 | -8.615850e-47 |
| Msa0547060 | Msa0975950 | 0.813634 | 2.317304e-51 | -8.615850e-47 |
| Msa0547060 | Msa0975960 | 0.827345 | 1.647182e-54 | -8.615850e-47 |
| Msa0547060 | Msa0984230 | -0.815181 | 1.054244e-51 | -8.615850e-47 |
| Msa0547060 | Msa0984290 | 0.800936 | 1.140760e-48 | -8.615850e-47 |
| Msa0547060 | Msa1002550 | -0.802222 | 6.215253e-49 | -8.615850e-47 |
| Msa0547060 | Msa1026080 | 0.802477 | 5.507358e-49 | -8.615850e-47 |
| Msa0547060 | Msa1026890 | 0.810428 | 1.158326e-50 | -8.615850e-47 |
| Msa0547060 | Msa1028660 | 0.827529 | 1.487926e-54 | -8.615850e-47 |
| Msa0547060 | Msa1030210 | 0.805779 | 1.131883e-49 | -8.615850e-47 |
| Msa0547060 | Msa1031780 | 0.818414 | 1.984849e-52 | -8.615850e-47 |
| Msa0547060 | Msa1035050 | 0.800581 | 1.347800e-48 | -8.615850e-47 |
| Msa0547060 | Msa1037360 | 0.816449 | 5.498162e-52 | -8.615850e-47 |
| Msa0547060 | Msa1041250 | 0.805484 | 1.305517e-49 | -8.615850e-47 |
| Msa0547060 | Msa1041720 | 0.801079 | 1.066330e-48 | -8.615850e-47 |
| Msa0547060 | Msa1056590 | -0.821119 | 4.783727e-53 | -8.615850e-47 |
| Msa0547060 | Msa1062060 | 0.815628 | 8.388709e-52 | -8.615850e-47 |
| Msa0547060 | Msa1064240 | 0.813409 | 2.597665e-51 | -8.615850e-47 |
| Msa0547060 | Msa1066770 | 0.805332 | 1.405007e-49 | -8.615850e-47 |
| Msa0547060 | Msa1067000 | 0.812531 | 4.045962e-51 | -8.615850e-47 |
| Msa0547060 | Msa1068380 | 0.800747 | 1.246502e-48 | -8.615850e-47 |
| Msa0547060 | Msa1075090 | 0.818229 | 2.186102e-52 | -8.615850e-47 |
| Msa0547060 | Msa1080820 | 0.816524 | 5.290424e-52 | -8.615850e-47 |
| Msa0547060 | Msa1081520 | -0.800511 | 1.392392e-48 | -8.615850e-47 |
| Msa0547060 | Msa1088000 | -0.801630 | 8.224685e-49 | -8.615850e-47 |
| Msa0547060 | Msa1092770 | -0.818108 | 2.327693e-52 | -8.615850e-47 |
| Msa0547060 | Msa1102410 | -0.804802 | 1.813327e-49 | -8.615850e-47 |
| Msa0547060 | Msa1111860 | 0.826034 | 3.384663e-54 | -8.615850e-47 |
| Msa0547060 | Msa1112190 | 0.807174 | 5.750896e-50 | -8.615850e-47 |
| Msa0547060 | Msa1114680 | 0.805732 | 1.157844e-49 | -8.615850e-47 |
| Msa0547060 | Msa1117770 | -0.818052 | 2.396945e-52 | -8.615850e-47 |
| Msa0547060 | Msa1118960 | 0.813900 | 2.025448e-51 | -8.615850e-47 |
| Msa0547060 | Msa1121300 | 0.808723 | 2.692704e-50 | -8.615850e-47 |
| Msa0547060 | Msa1121720 | -0.827727 | 1.333210e-54 | -8.615850e-47 |
| Msa0547060 | Msa1123000 | 0.807268 | 5.492343e-50 | -8.615850e-47 |
| Msa0547060 | Msa1130150 | -0.813324 | 2.711077e-51 | -8.615850e-47 |
| Msa0547060 | Msa1130850 | -0.819997 | 8.654372e-53 | -8.615850e-47 |
| Msa0547060 | Msa1130910 | -0.810024 | 1.415909e-50 | -8.615850e-47 |
| Msa0547060 | Msa1150750 | 0.804715 | 1.891061e-49 | -8.615850e-47 |
| Msa0547060 | Msa1154240 | 0.826316 | 2.900925e-54 | -8.615850e-47 |
| Msa0547060 | Msa1156120 | -0.805457 | 1.322484e-49 | -8.615850e-47 |
| Msa0547060 | Msa1157200 | 0.808724 | 2.690148e-50 | -8.615850e-47 |
| Msa0547060 | Msa1164230 | 0.824310 | 8.651817e-54 | -8.615850e-47 |
| Msa0547060 | Msa1165670 | 0.804555 | 2.042342e-49 | -8.615850e-47 |
| Msa0547060 | Msa1173150 | 0.817493 | 3.204843e-52 | -8.615850e-47 |
| Msa0547060 | Msa1174280 | 0.834157 | 3.525599e-56 | -8.615850e-47 |
| Msa0547060 | Msa1177650 | 0.819671 | 1.027332e-52 | -8.615850e-47 |
| Msa0547060 | Msa1184100 | -0.816960 | 4.223049e-52 | -8.615850e-47 |
| Msa0547060 | Msa1185270 | 0.837157 | 6.133951e-57 | -8.615850e-47 |
| Msa0547060 | Msa1199870 | 0.821039 | 4.989900e-53 | -8.615850e-47 |
| Msa0547060 | Msa1202110 | 0.831648 | 1.481615e-55 | -8.615850e-47 |
| Msa0547060 | Msa1202470 | 0.810903 | 9.144929e-51 | -8.615850e-47 |
| Msa0547060 | Msa1211610 | 0.821727 | 3.461634e-53 | -8.615850e-47 |
| Msa0547060 | Msa1212150 | -0.807267 | 5.494698e-50 | -8.615850e-47 |
| Msa0547060 | Msa1217260 | 0.859910 | 2.982447e-63 | -8.615850e-47 |
| Msa0547060 | Msa1221220 | 0.818739 | 1.675116e-52 | -8.615850e-47 |
| Msa0547060 | Msa1223560 | 0.805565 | 1.255623e-49 | -8.615850e-47 |
| Msa0547060 | Msa1228260 | -0.827805 | 1.276839e-54 | -8.615850e-47 |
| Msa0547060 | Msa1236120 | -0.813912 | 2.012497e-51 | -8.615850e-47 |
| Msa0547060 | Msa1236190 | -0.823026 | 1.728736e-53 | -8.615850e-47 |
| Msa0547060 | Msa1239190 | 0.820089 | 8.244157e-53 | -8.615850e-47 |
| Msa0547060 | Msa1239210 | 0.840251 | 9.733160e-58 | -8.615850e-47 |
| Msa0547060 | Msa1241770 | 0.851467 | 8.706605e-61 | -8.615850e-47 |
| Msa0547060 | Msa1252810 | 0.803370 | 3.601682e-49 | -8.615850e-47 |
| Msa0547060 | Msa1254870 | 0.833280 | 5.837875e-56 | -8.615850e-47 |
| Msa0547060 | Msa1254910 | 0.809028 | 2.316580e-50 | -8.615850e-47 |
| Msa0547060 | Msa1262540 | 0.850844 | 1.305856e-60 | -8.615850e-47 |
| Msa0547060 | Msa1263500 | 0.801828 | 7.489909e-49 | -8.615850e-47 |
| Msa0547060 | Msa1271220 | -0.829620 | 4.648452e-55 | -8.615850e-47 |
| Msa0547060 | Msa1277270 | -0.810246 | 1.267779e-50 | -8.615850e-47 |
| Msa0547060 | Msa1279060 | 0.852083 | 5.824596e-61 | -8.615850e-47 |
| Msa0547060 | Msa1280530 | 0.812977 | 3.231543e-51 | -8.615850e-47 |
| Msa0547060 | Msa1295200 | 0.804757 | 1.853007e-49 | -8.615850e-47 |
| Msa0547060 | Msa1298830 | 0.803568 | 3.275620e-49 | -8.615850e-47 |
| Msa0547060 | Msa1299480 | 0.822190 | 2.704798e-53 | -8.615850e-47 |
| Msa0547060 | Msa1302340 | 0.826822 | 2.196742e-54 | -8.615850e-47 |
| Msa0547060 | Msa1303620 | -0.806097 | 9.704385e-50 | -8.615850e-47 |
| Msa0547060 | Msa1308430 | -0.828801 | 7.344210e-55 | -8.615850e-47 |
| Msa0547060 | Msa1315880 | -0.823338 | 1.461987e-53 | -8.615850e-47 |
| Msa0547060 | Msa1317740 | 0.814026 | 1.899769e-51 | -8.615850e-47 |
| Msa0547060 | Msa1328430 | 0.832905 | 7.238790e-56 | -8.615850e-47 |
| Msa0547060 | Msa1330400 | 0.819147 | 1.352661e-52 | -8.615850e-47 |
| Msa0547060 | Msa1340440 | 0.821577 | 3.749609e-53 | -8.615850e-47 |
| Msa0547060 | Msa1341710 | -0.818033 | 2.420996e-52 | -8.615850e-47 |
| Msa0547060 | Msa1341850 | -0.821393 | 4.134568e-53 | -8.615850e-47 |
| Msa0547060 | Msa1342360 | -0.803946 | 2.734578e-49 | -8.615850e-47 |
| Msa0547060 | Msa1348180 | -0.802876 | 4.556359e-49 | -8.615850e-47 |
| Msa0547060 | Msa1349830 | 0.830759 | 2.450734e-55 | -8.615850e-47 |
| Msa0547060 | Msa1350590 | -0.837989 | 3.753274e-57 | -8.615850e-47 |
| Msa0547060 | Msa1356100 | -0.827946 | 1.181078e-54 | -8.615850e-47 |
| Msa0547060 | Msa1357570 | 0.822019 | 2.963526e-53 | -8.615850e-47 |
| Msa0547060 | Msa1366480 | 0.820984 | 5.136985e-53 | -8.615850e-47 |
| Msa0547060 | Msa1371540 | -0.827425 | 1.575427e-54 | -8.615850e-47 |
| Msa0547060 | Msa1372460 | -0.829421 | 5.198032e-55 | -8.615850e-47 |
| Msa0547060 | Msa1373310 | -0.800740 | 1.250966e-48 | -8.615850e-47 |
| Msa0547060 | Msa1373420 | -0.805255 | 1.458022e-49 | -8.615850e-47 |
| Msa0547060 | Msa1375890 | 0.834581 | 2.759540e-56 | -8.615850e-47 |
| Msa0547060 | Msa1377050 | 0.801897 | 7.249292e-49 | -8.615850e-47 |
| Msa0547060 | Msa1377980 | -0.824502 | 7.795436e-54 | -8.615850e-47 |
| Msa0547060 | Msa1379020 | 0.801822 | 7.510905e-49 | -8.615850e-47 |
| Msa0547060 | Msa1386910 | -0.807947 | 3.941427e-50 | -8.615850e-47 |
| Msa0547060 | Msa1387610 | 0.815917 | 7.229345e-52 | -8.615850e-47 |
| Msa0547060 | Msa1388690 | 0.803510 | 3.368078e-49 | -8.615850e-47 |
| Msa0547060 | Msa1395380 | -0.824525 | 7.698712e-54 | -8.615850e-47 |
| Msa0547060 | Msa1398120 | 0.833593 | 4.877905e-56 | -8.615850e-47 |
| Msa0547060 | Msa1398320 | 0.812235 | 4.693955e-51 | -8.615850e-47 |
| Msa0547060 | Msa1401110 | 0.818948 | 1.501909e-52 | -8.615850e-47 |
| Msa0547060 | Msa1408230 | -0.820476 | 6.722816e-53 | -8.615850e-47 |
| Msa0547060 | Msa1408280 | -0.824666 | 7.132865e-54 | -8.615850e-47 |
| Msa0547060 | Msa1410480 | -0.804288 | 2.321813e-49 | -8.615850e-47 |
| Msa0547060 | Msa1410500 | -0.815535 | 8.798161e-52 | -8.615850e-47 |
| Msa0547060 | Msa1411370 | 0.809312 | 2.013529e-50 | -8.615850e-47 |
| Msa0547060 | Msa1412410 | 0.825528 | 4.461982e-54 | -8.615850e-47 |
| Msa0547060 | Msa1413150 | 0.804421 | 2.178380e-49 | -8.615850e-47 |
| Msa0547060 | Msa1415510 | -0.816336 | 5.829164e-52 | -8.615850e-47 |
| Msa0547060 | Msa1423560 | -0.801815 | 7.535630e-49 | -8.615850e-47 |
| Msa0547060 | Msa1424490 | -0.819725 | 9.987992e-53 | -8.615850e-47 |
| Msa0547060 | Msa1427860 | 0.832256 | 1.048687e-55 | -8.615850e-47 |
| Msa0547060 | Msa1429470 | 0.803805 | 2.925241e-49 | -8.615850e-47 |
| Msa0547060 | Msa1434860 | -0.830197 | 3.362400e-55 | -8.615850e-47 |
| Msa0547060 | Msa1435320 | 0.827351 | 1.641148e-54 | -8.615850e-47 |
| Msa0547060 | Msa1439860 | 0.807802 | 4.230980e-50 | -8.615850e-47 |
| Msa0547060 | Msa1443400 | 0.826901 | 2.103070e-54 | -8.615850e-47 |
| Msa0547060 | Msa1444130 | -0.807341 | 5.299212e-50 | -8.615850e-47 |
| Msa0547060 | Msa1444690 | -0.809980 | 1.446791e-50 | -8.615850e-47 |
| Msa0547060 | Msa1448040 | 0.827214 | 1.770054e-54 | -8.615850e-47 |
| Msa0547060 | Msa1449470 | 0.812234 | 4.697596e-51 | -8.615850e-47 |
| Msa0547060 | Msa1452800 | -0.802545 | 5.331781e-49 | -8.615850e-47 |
| Msa0547060 | Msa1453600 | 0.819981 | 8.730560e-53 | -8.615850e-47 |
| Msa0547060 | Msa1453890 | 0.825597 | 4.298348e-54 | -8.615850e-47 |
| Msa0547060 | Msa1454300 | -0.822919 | 1.830588e-53 | -8.615850e-47 |
| Msa0547060 | Msa1459680 | -0.812258 | 4.640526e-51 | -8.615850e-47 |
| Msa0547060 | Msa1459920 | 0.815643 | 8.321920e-52 | -8.615850e-47 |
| Msa0547060 | Msa1461840 | -0.813662 | 2.285284e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547060 | MtrunA17_Chr4g0028881 | 96.047 | 936 | 26 | 1 | 39 | 963 | 1 | 936 | 0.0 | 1869 |
| Msa0547060 | MtrunA17_Chr8g0345071 | 27.795 | 331 | 189 | 10 | 619 | 915 | 52 | 366 | 1.01e-29 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547060 | AT5G60700.2 | 79.786 | 935 | 176 | 5 | 39 | 963 | 1 | 932 | 0.0 | 1547 |
| Msa0547060 | AT5G60700.1 | 86.228 | 668 | 92 | 0 | 296 | 963 | 1 | 668 | 0.0 | 1217 |
| Msa0547060 | AT5G12260.1 | 31.203 | 266 | 148 | 10 | 632 | 873 | 73 | 327 | 1.23e-27 | 120 |
Find 167 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTTGGTTTGGAAAATT+TGG | 0.065005 | 4_1:-39777710 | None:intergenic |
| CAACCATTTGTTCTTGATTT+AGG | 0.115469 | 4_1:-39777623 | None:intergenic |
| CCCCATGTTTCTTTGTCTTT+TGG | 0.116342 | 4_1:-39775956 | None:intergenic |
| AAAGAAAATGTTAGAGATTT+TGG | 0.128444 | 4_1:+39774451 | Msa0547060:CDS |
| CTTCTGTGTCTAAAGTTATT+TGG | 0.177954 | 4_1:+39776521 | Msa0547060:CDS |
| ATTGGTTATTGTTGTCTTCT+TGG | 0.218400 | 4_1:-39773939 | None:intergenic |
| TTGACAACTTCAACAATTCT+TGG | 0.227499 | 4_1:-39777422 | None:intergenic |
| TAAAACTCTCTCCAATGTTT+AGG | 0.235717 | 4_1:-39777545 | None:intergenic |
| TTAGGCGTTGGTTCAATTTC+CGG | 0.269528 | 4_1:+39776316 | Msa0547060:CDS |
| AGGGAGATGGAAGAGAGTTC+TGG | 0.270847 | 4_1:-39777392 | None:intergenic |
| TTAGTGAATTTACCCTGTTT+TGG | 0.274450 | 4_1:-39777055 | None:intergenic |
| CAATCAAGCTGTTTCTCTTA+AGG | 0.280030 | 4_1:+39777901 | Msa0547060:CDS |
| TGTGGTTAAGCATAATAAAA+TGG | 0.289497 | 4_1:+39777784 | Msa0547060:CDS |
| CGGTTTAAGATCTTTGATTT+AGG | 0.293132 | 4_1:+39776298 | Msa0547060:CDS |
| CTAAAACTCATGTTACAAAT+TGG | 0.299622 | 4_1:-39773625 | None:intergenic |
| AAAGTATAAGAATTCAGTTT+TGG | 0.307108 | 4_1:+39774493 | Msa0547060:CDS |
| GAATACACTGCTTGTATAAC+TGG | 0.310239 | 4_1:-39776358 | None:intergenic |
| AGCTCTCAAATGGCCTCTTT+TGG | 0.312366 | 4_1:+39776261 | Msa0547060:CDS |
| CAACAATTCTTGGTGTGTAT+AGG | 0.312888 | 4_1:-39777412 | None:intergenic |
| ACTAGTCCACCTAAGGGATT+TGG | 0.313893 | 4_1:-39771111 | None:intergenic |
| CAAGTTTGGGTGCTTTCGTT+CGG | 0.315012 | 4_1:+39774263 | Msa0547060:CDS |
| TCACCAGTTGAGAAGGTAAA+AGG | 0.315759 | 4_1:-39774716 | None:intergenic |
| TAGGCGTTGGTTCAATTTCC+GGG | 0.318547 | 4_1:+39776317 | Msa0547060:CDS |
| AACAATTCTTGGTGTGTATA+GGG | 0.318766 | 4_1:-39777411 | None:intergenic |
| AATCAAGCTGTTTCTCTTAA+GGG | 0.319362 | 4_1:+39777902 | Msa0547060:CDS |
| CTCTTGAGGGACGCCTCGTT+TGG | 0.323081 | 4_1:-39774290 | None:intergenic |
| TTTGCAGACAGAAGCTGATT+TGG | 0.331055 | 4_1:+39774397 | Msa0547060:CDS |
| AAAACTCTCTCCAATGTTTA+GGG | 0.348787 | 4_1:-39777544 | None:intergenic |
| TTCATCAATTACCTTGTAGT+TGG | 0.366831 | 4_1:+39777507 | Msa0547060:CDS |
| TCATCAATTACCTTGTAGTT+GGG | 0.371809 | 4_1:+39777508 | Msa0547060:CDS |
| GGGAGATGGAAGAGAGTTCT+GGG | 0.371894 | 4_1:-39777391 | None:intergenic |
| AATTGTGTCGCATTCCATTT+CGG | 0.376037 | 4_1:-39777452 | None:intergenic |
| GACTTAAATTTCCTATAACT+TGG | 0.376357 | 4_1:-39774563 | None:intergenic |
| TTGATCCATAGGTAGTAATA+AGG | 0.377040 | 4_1:-39777326 | None:intergenic |
| CAAATGGTTGGCAAGCTTCA+TGG | 0.386635 | 4_1:+39777636 | Msa0547060:CDS |
| CTATCCATGTTGAAAGTGAT+TGG | 0.388496 | 4_1:-39777128 | None:intergenic |
| TGTGCAATTCTTGAGAAATC+TGG | 0.389282 | 4_1:-39773847 | None:intergenic |
| CTTGATTTAGGAATTTGAAC+CGG | 0.391501 | 4_1:-39777611 | None:intergenic |
| TCAACATCATAACCCAAAAC+AGG | 0.393205 | 4_1:+39777042 | Msa0547060:CDS |
| AACTAGTAGGTTCATTTGAA+TGG | 0.394328 | 4_1:+39777174 | Msa0547060:CDS |
| TGGACCTTTCAAATCCCATT+TGG | 0.397443 | 4_1:-39774138 | None:intergenic |
| GCTTCAGAAACTAATTCAAA+TGG | 0.399454 | 4_1:+39776472 | Msa0547060:CDS |
| TACTGTTGTTTCTGATACAT+AGG | 0.399588 | 4_1:-39775999 | None:intergenic |
| GCTTTCCACGATTCTCTTGA+GGG | 0.406469 | 4_1:-39774303 | None:intergenic |
| TGATGAAGGTAAGGTGTGTT+TGG | 0.414604 | 4_1:-39777491 | None:intergenic |
| TTTATCAATAGTGATATCAT+AGG | 0.415176 | 4_1:-39774618 | None:intergenic |
| CCATCTTCAGATGACAACTT+TGG | 0.415502 | 4_1:+39777272 | Msa0547060:CDS |
| GAGAAACAGCTTGATTGAAA+AGG | 0.419242 | 4_1:-39777895 | None:intergenic |
| AATTCTTGAGAAATCTGGTT+TGG | 0.422536 | 4_1:-39773842 | None:intergenic |
| CGTTCTTTGCAAACCAAAAG+AGG | 0.427496 | 4_1:-39776274 | None:intergenic |
| TAAAGCTGCTGGTGCTAAGT+TGG | 0.428332 | 4_1:+39777928 | Msa0547060:CDS |
| TCCACAGTAATTACAACACT+TGG | 0.428866 | 4_1:-39776412 | None:intergenic |
| GGAATTGTTGTGGCTTGAAT+TGG | 0.430386 | 4_1:-39773957 | None:intergenic |
| CTAGTCCACCTAAGGGATTT+GGG | 0.431320 | 4_1:-39771110 | None:intergenic |
| AGCAGTGTATTCTAGTTTGA+AGG | 0.435732 | 4_1:+39776369 | Msa0547060:CDS |
| TAATGAACATGAAATCCAAA+TGG | 0.437665 | 4_1:+39774123 | Msa0547060:CDS |
| GGCGAGAAGTGGAGATTCCT+TGG | 0.445610 | 4_1:+39773660 | Msa0547060:CDS |
| TCTCACCTTATTACTACCTA+TGG | 0.445983 | 4_1:+39777321 | Msa0547060:CDS |
| AATTTCATCTCCTAGATAGT+AGG | 0.446568 | 4_1:-39777105 | None:intergenic |
| TTGAAGTGTCTCACTTCCAA+TGG | 0.449324 | 4_1:-39774096 | None:intergenic |
| CTCACCAATGCCTACTATCT+AGG | 0.449528 | 4_1:+39777095 | Msa0547060:CDS |
| ACGGATAAGTTTCATAAGCT+CGG | 0.451724 | 4_1:+39774337 | Msa0547060:CDS |
| ATTGATATGATGTATTTAAG+AGG | 0.454107 | 4_1:+39777671 | Msa0547060:CDS |
| GAGAGACTTGAGGGTCATAA+TGG | 0.457607 | 4_1:-39777367 | None:intergenic |
| GATATTGCCATTTAGACAAA+AGG | 0.460055 | 4_1:+39774529 | Msa0547060:CDS |
| AAGTTTGGGTGCTTTCGTTC+GGG | 0.460856 | 4_1:+39774264 | Msa0547060:CDS |
| ATGATCACACCACACATTGT+AGG | 0.461395 | 4_1:+39773886 | Msa0547060:CDS |
| TTGGTTCTTAAATCAATTGA+AGG | 0.462460 | 4_1:-39773823 | None:intergenic |
| CACTATTGATAAAATTGTGC+AGG | 0.462476 | 4_1:+39774628 | Msa0547060:CDS |
| ATTCCTAAATCAAGAACAAA+TGG | 0.463502 | 4_1:+39777620 | Msa0547060:CDS |
| AAGCTGCAGCAGCTCTCAAA+TGG | 0.469839 | 4_1:+39776251 | Msa0547060:CDS |
| GTTGCTGTTGATCATCATAC+TGG | 0.470551 | 4_1:+39777989 | Msa0547060:CDS |
| AAATTTAAGTCTAAAGAAGC+TGG | 0.471279 | 4_1:+39774575 | Msa0547060:CDS |
| AAAGAGAGAGCTTTATGAAG+AGG | 0.472811 | 4_1:+39774052 | Msa0547060:CDS |
| TGTGAGAAAGGCTTTGAAGA+TGG | 0.472901 | 4_1:+39776450 | Msa0547060:CDS |
| AAAGCTGCTGGTGCTAAGTT+GGG | 0.474235 | 4_1:+39777929 | Msa0547060:CDS |
| ATGTTGAATGACTATGTTGC+TGG | 0.474502 | 4_1:+39773688 | Msa0547060:CDS |
| TGGTGGAAAGCACTTTCATC+TGG | 0.474973 | 4_1:+39776058 | Msa0547060:CDS |
| GTACTATGGAAGGTTTCAAA+TGG | 0.475657 | 4_1:+39774373 | Msa0547060:CDS |
| CTTCAAAAGTATAGAAATGC+AGG | 0.477205 | 4_1:+39775911 | Msa0547060:CDS |
| CGGATAAGTTTCATAAGCTC+GGG | 0.477643 | 4_1:+39774338 | Msa0547060:CDS |
| AGCACCCAAACTTGATGAAA+AGG | 0.479524 | 4_1:-39774254 | None:intergenic |
| GTGATATCATAGGCAGGATC+AGG | 0.479851 | 4_1:-39774608 | None:intergenic |
| AAGATCTTTGATTTAGGCGT+TGG | 0.481505 | 4_1:+39776304 | Msa0547060:CDS |
| GAAGGTAAGGTGTGTTTGGA+TGG | 0.481855 | 4_1:-39777487 | None:intergenic |
| TTGTCAAAGAAAGACCGAAA+TGG | 0.487112 | 4_1:+39777438 | Msa0547060:CDS |
| CTTCAGAAACTAATTCAAAT+GGG | 0.487507 | 4_1:+39776473 | Msa0547060:CDS |
| CTTAAGGGACTTAAAGCTGC+TGG | 0.489733 | 4_1:+39777917 | Msa0547060:CDS |
| GAAGCAACCATAAAACTAGT+AGG | 0.492724 | 4_1:+39777161 | Msa0547060:CDS |
| AATTTCCAAAACAAAACCAT+TGG | 0.494665 | 4_1:+39774080 | Msa0547060:CDS |
| CAAGGTAATTGATGAAGGTA+AGG | 0.495150 | 4_1:-39777500 | None:intergenic |
| ATCTGGCTACATAACACAAT+GGG | 0.497406 | 4_1:+39776075 | Msa0547060:CDS |
| GTTCTGGGAGAGAGACTTGA+GGG | 0.497749 | 4_1:-39777376 | None:intergenic |
| TGAGTGCATATTTGATCCAT+AGG | 0.502316 | 4_1:-39777337 | None:intergenic |
| AATGAACATGAAATCCAAAT+GGG | 0.502594 | 4_1:+39774124 | Msa0547060:CDS |
| TTCAAGTTCGCGATGATCAA+TGG | 0.502893 | 4_1:+39776038 | Msa0547060:CDS |
| CTGGTGAAGATTTGCACCTC+AGG | 0.503101 | 4_1:+39774732 | Msa0547060:CDS |
| TGTGTCTAAAGTTATTTGGA+TGG | 0.507245 | 4_1:+39776525 | Msa0547060:CDS |
| CGAAATACGACGGCGAGAAG+TGG | 0.507540 | 4_1:+39773649 | Msa0547060:CDS |
| AGGTAGGGTTTGTTGAAGCA+AGG | 0.507568 | 4_1:-39774234 | None:intergenic |
| CCAAAGTTGTCATCTGAAGA+TGG | 0.511797 | 4_1:-39777272 | None:intergenic |
| TTATAGTTCCCAAATCCCTT+AGG | 0.515241 | 4_1:+39771102 | Msa0547060:CDS |
| CATCAATTACCTTGTAGTTG+GGG | 0.519801 | 4_1:+39777509 | Msa0547060:CDS |
| TCATTCTCACAAACAAGAGA+TGG | 0.521795 | 4_1:-39773978 | None:intergenic |
| CTTTGAGAGCTCTGACTCAA+GGG | 0.528861 | 4_1:-39771078 | None:intergenic |
| TGCTGGTGCTAAGTTGGGAC+AGG | 0.530192 | 4_1:+39777934 | Msa0547060:CDS |
| AACTACAAGGTAATTGATGA+AGG | 0.532933 | 4_1:-39777505 | None:intergenic |
| ATCTCCTAGATAGTAGGCAT+TGG | 0.534319 | 4_1:-39777099 | None:intergenic |
| CTAAAATCATCCTTCAACAA+TGG | 0.535382 | 4_1:-39777818 | None:intergenic |
| AGCTTTCCACGATTCTCTTG+AGG | 0.537297 | 4_1:-39774304 | None:intergenic |
| TCTTTGAGAGCTCTGACTCA+AGG | 0.542690 | 4_1:-39771079 | None:intergenic |
| GCAGTGTATTCTAGTTTGAA+GGG | 0.542949 | 4_1:+39776370 | Msa0547060:CDS |
| AAAGCATACATTGTTGTCCC+TGG | 0.547242 | 4_1:+39776205 | Msa0547060:CDS |
| TATGTGCACCTGGTTCCATA+TGG | 0.547518 | 4_1:-39777745 | None:intergenic |
| TATTGATGTTAATGTGAGAA+AGG | 0.547988 | 4_1:+39776438 | Msa0547060:CDS |
| GCTGCTGCAGCTTGTTCACA+AGG | 0.548041 | 4_1:-39776241 | None:intergenic |
| TTGATTTAGGAATTTGAACC+GGG | 0.548162 | 4_1:-39777610 | None:intergenic |
| TGGAAAGCTATAACGATTCA+CGG | 0.548641 | 4_1:+39774318 | Msa0547060:CDS |
| CAAATCTTCACCAGTTGAGA+AGG | 0.549226 | 4_1:-39774723 | None:intergenic |
| GATGGTAATCTTGAAGCTGA+AGG | 0.550276 | 4_1:-39777866 | None:intergenic |
| TCTCAAGAATTGCACAACAA+TGG | 0.551342 | 4_1:+39773854 | Msa0547060:CDS |
| TCTTGGTGTGTATAGGGAGA+TGG | 0.554912 | 4_1:-39777405 | None:intergenic |
| GTCATTCAACATTCCATCCA+AGG | 0.556417 | 4_1:-39773677 | None:intergenic |
| AACACTGCTCCCCAACTACA+AGG | 0.561032 | 4_1:-39777518 | None:intergenic |
| TTGATATGATGTATTTAAGA+GGG | 0.562184 | 4_1:+39777672 | Msa0547060:CDS |
| AACAAGAGATGGAATTGTTG+TGG | 0.564714 | 4_1:-39773967 | None:intergenic |
| TCCAAAAGACAAAGAAACAT+GGG | 0.566745 | 4_1:+39775955 | Msa0547060:CDS |
| TGATTGAAAAGGTTCAAAGA+TGG | 0.566992 | 4_1:-39777884 | None:intergenic |
| AGAAGTGGAGATTCCTTGGA+TGG | 0.567533 | 4_1:+39773664 | Msa0547060:CDS |
| TAAGAGCAGTGAGTGAAAGT+TGG | 0.570309 | 4_1:+39777246 | Msa0547060:CDS |
| TCAATAGTGATATCATAGGC+AGG | 0.570472 | 4_1:-39774614 | None:intergenic |
| CTGCTCTTATGAGTCCACCT+TGG | 0.573990 | 4_1:-39777232 | None:intergenic |
| AAATCCAAATGGGATTTGAA+AGG | 0.575214 | 4_1:+39774134 | Msa0547060:CDS |
| GTTGATGATGATATGATACC+TGG | 0.577017 | 4_1:+39774428 | Msa0547060:CDS |
| TAATTCAAATGGGACTACAT+TGG | 0.578547 | 4_1:+39776483 | Msa0547060:CDS |
| CTAAATCAAGAACAAATGGT+TGG | 0.578613 | 4_1:+39777624 | Msa0547060:CDS |
| TTTGCACTAATATGTGCACC+TGG | 0.582857 | 4_1:-39777755 | None:intergenic |
| CCAAACTTGATGAAAAGGTA+GGG | 0.586043 | 4_1:-39774249 | None:intergenic |
| GCATACATTGTTGTCCCTGG+TGG | 0.587750 | 4_1:+39776208 | Msa0547060:CDS |
| TCAACTAACCATATGGAACC+AGG | 0.589500 | 4_1:+39777737 | Msa0547060:CDS |
| TTTATGTTTACATGAACATG+AGG | 0.594622 | 4_1:+39777564 | Msa0547060:CDS |
| CAAGGACAGAAATTTCCACC+AGG | 0.595546 | 4_1:-39776223 | None:intergenic |
| CCCAAACTTGATGAAAAGGT+AGG | 0.596316 | 4_1:-39774250 | None:intergenic |
| AATTCCAATCACTTTCAACA+TGG | 0.597469 | 4_1:+39777124 | Msa0547060:CDS |
| AGTTCTGGGAGAGAGACTTG+AGG | 0.603063 | 4_1:-39777377 | None:intergenic |
| TTCGTTCGGGAGTCCAAACG+AGG | 0.604649 | 4_1:+39774277 | Msa0547060:CDS |
| ATCCAAAAGACAAAGAAACA+TGG | 0.611454 | 4_1:+39775954 | Msa0547060:CDS |
| CAGAATCTTGAGCAGTGATG+AGG | 0.612938 | 4_1:-39778016 | None:intergenic |
| CCACAGTAATTACAACACTT+GGG | 0.613515 | 4_1:-39776411 | None:intergenic |
| TGCCTCAGAGTTCGACACCC+CGG | 0.617245 | 4_1:-39776335 | None:intergenic |
| TATTAGTGCAAAAGATAATG+TGG | 0.620559 | 4_1:+39777766 | Msa0547060:CDS |
| GGTTCATTTGAATGGCCACA+TGG | 0.621803 | 4_1:+39777182 | Msa0547060:CDS |
| AGGCGTTGGTTCAATTTCCG+GGG | 0.624380 | 4_1:+39776318 | Msa0547060:CDS |
| CATCTGGCTACATAACACAA+TGG | 0.632893 | 4_1:+39776074 | Msa0547060:CDS |
| CAACATCATAACCCAAAACA+GGG | 0.633195 | 4_1:+39777043 | Msa0547060:CDS |
| AAGTTCGCGATGATCAATGG+TGG | 0.635116 | 4_1:+39776041 | Msa0547060:CDS |
| ACTTTAGACACAGAAGCCCT+AGG | 0.637156 | 4_1:-39776514 | None:intergenic |
| TGACTCAAGGGATTGATCAG+AGG | 0.638706 | 4_1:-39771066 | None:intergenic |
| CTAAGAAGAAGAATCATCCA+AGG | 0.647301 | 4_1:+39777215 | Msa0547060:CDS |
| ACAGGGTAAATTCACTAACA+AGG | 0.650361 | 4_1:+39777060 | Msa0547060:CDS |
| TGATAATGTCCTACAATGTG+TGG | 0.652804 | 4_1:-39773895 | None:intergenic |
| GGCGTCCCTCAAGAGAATCG+TGG | 0.659434 | 4_1:+39774298 | Msa0547060:CDS |
| AGAAGAAGAATCATCCAAGG+TGG | 0.677908 | 4_1:+39777218 | Msa0547060:CDS |
| CCCAAGTGTTGTAATTACTG+TGG | 0.680116 | 4_1:+39776411 | Msa0547060:CDS |
| TTCCGGGGTGTCGAACTCTG+AGG | 0.689190 | 4_1:+39776333 | Msa0547060:CDS |
| CCAAAAGACAAAGAAACATG+GGG | 0.703653 | 4_1:+39775956 | Msa0547060:CDS |
| AAGGACAGAAATTTCCACCA+GGG | 0.730912 | 4_1:-39776222 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTATTTTTTAAAT+CGG | - | chr4_1:39772203-39772222 | None:intergenic | 0.0% |
| !! | TATATATAAAATAAAATTAT+GGG | - | chr4_1:39774888-39774907 | None:intergenic | 0.0% |
| !!! | TTTTAACTTTTTCATTAAAT+GGG | - | chr4_1:39771658-39771677 | None:intergenic | 10.0% |
| !!! | ATTTTAACTTTTTCATTAAA+TGG | - | chr4_1:39771659-39771678 | None:intergenic | 10.0% |
| !! | CAATATAATAATGAAATTAT+TGG | + | chr4_1:39773051-39773070 | Msa0547060:intron | 10.0% |
| !! | TTATATTATATATATACAAG+TGG | - | chr4_1:39773263-39773282 | None:intergenic | 10.0% |
| !!! | TCTATTTTTTTTTTTTTTTC+AGG | + | chr4_1:39773575-39773594 | Msa0547060:intron | 10.0% |
| !! | TATATAAAATAAAATTATGG+GGG | - | chr4_1:39774886-39774905 | None:intergenic | 10.0% |
| !!! | AGATTTTCTATATTAAAATA+AGG | - | chr4_1:39775336-39775355 | None:intergenic | 10.0% |
| !!! | AATGATATATAACTAAATTT+TGG | + | chr4_1:39776634-39776653 | Msa0547060:intron | 10.0% |
| !! | AAAAATTCATTACATACATA+AGG | + | chr4_1:39771456-39771475 | Msa0547060:intron | 15.0% |
| !!! | TTTAACTTTTTCATTAAATG+GGG | - | chr4_1:39771657-39771676 | None:intergenic | 15.0% |
| !! | CTAAAAAAATATGTAATGAT+AGG | + | chr4_1:39771904-39771923 | Msa0547060:intron | 15.0% |
| !! | AAAATGAAGTATATAGTATA+TGG | - | chr4_1:39772675-39772694 | None:intergenic | 15.0% |
| !!! | AATAATGAAATTATTGGTTA+AGG | + | chr4_1:39773057-39773076 | Msa0547060:intron | 15.0% |
| !!! | CAATAATATAAAGAATTTTG+AGG | + | chr4_1:39773471-39773490 | Msa0547060:intron | 15.0% |
| !!! | TTTTTTTTTTTTCAGGATAA+AGG | + | chr4_1:39773582-39773601 | Msa0547060:intron | 15.0% |
| !! | TCATAAAATAAAATTGCATA+TGG | - | chr4_1:39774911-39774930 | None:intergenic | 15.0% |
| !!! | ACATAAATGACATTTTTTTT+TGG | - | chr4_1:39774955-39774974 | None:intergenic | 15.0% |
| !!! | TTTATTCAATTTTCATATGA+AGG | + | chr4_1:39775601-39775620 | Msa0547060:intron | 15.0% |
| !!! | TAATAATTTTTTACATGTGT+TGG | + | chr4_1:39775794-39775813 | Msa0547060:intron | 15.0% |
| !! | AACTTATTTCAAAGATTGAA+TGG | - | chr4_1:39771259-39771278 | None:intergenic | 20.0% |
| !!! | TTTTATTCAGTGTAATTTGT+GGG | - | chr4_1:39771305-39771324 | None:intergenic | 20.0% |
| !!! | AATGAATTTTTCTTCGAATT+TGG | - | chr4_1:39771447-39771466 | None:intergenic | 20.0% |
| !! | AAAATGTGTTCCATTTATAT+AGG | + | chr4_1:39771576-39771595 | Msa0547060:intron | 20.0% |
| !! | ATTTATATAGGTAAGGTTAT+GGG | + | chr4_1:39771588-39771607 | Msa0547060:intron | 20.0% |
| !!! | ATTTTAAACAACCTAAAATG+AGG | - | chr4_1:39771849-39771868 | None:intergenic | 20.0% |
| !!! | CTATTTTCCTCTTATTAATT+TGG | - | chr4_1:39772359-39772378 | None:intergenic | 20.0% |
| !! | ATCATGACTAATTAATATCT+AGG | + | chr4_1:39772428-39772447 | Msa0547060:intron | 20.0% |
| !!! | GTAGCAAACATTTTTTTTAA+TGG | - | chr4_1:39772604-39772623 | None:intergenic | 20.0% |
| !! | TTTGTTACAAACAGTATATA+TGG | - | chr4_1:39772733-39772752 | None:intergenic | 20.0% |
| !! | TATATTGTTCCTTGTAATTT+AGG | + | chr4_1:39772767-39772786 | Msa0547060:intron | 20.0% |
| !! | TTAATGAAACCTAAATTACA+AGG | - | chr4_1:39772779-39772798 | None:intergenic | 20.0% |
| !!! | AATTTAGGTTTCATTAATTG+TGG | + | chr4_1:39772782-39772801 | Msa0547060:intron | 20.0% |
| !! | ATACGTACATTAATGAATAT+AGG | - | chr4_1:39772918-39772937 | None:intergenic | 20.0% |
| !!! | AAAAGAAAAGCATGATTTAA+GGG | - | chr4_1:39773007-39773026 | None:intergenic | 20.0% |
| !!! | ATCAAATTTGGCTTTTAATA+TGG | + | chr4_1:39773152-39773171 | Msa0547060:intron | 20.0% |
| !!! | CTTTTAATATGGTATCTTAT+GGG | + | chr4_1:39773163-39773182 | Msa0547060:intron | 20.0% |
| !! | AGATGAATATAGAAAACTAA+AGG | - | chr4_1:39773332-39773351 | None:intergenic | 20.0% |
| !! | AGATTAGTGATTGAAAAATT+TGG | + | chr4_1:39773379-39773398 | Msa0547060:intron | 20.0% |
| !! | ATAGACAAAGTTAGTTAATT+AGG | - | chr4_1:39773560-39773579 | None:intergenic | 20.0% |
| !!! | AACATTTTTATTGTACTACA+TGG | + | chr4_1:39773798-39773817 | Msa0547060:CDS | 20.0% |
| !!! | ACATTTTTATTGTACTACAT+GGG | + | chr4_1:39773799-39773818 | Msa0547060:CDS | 20.0% |
| !!! | TTCAACAAAACATTGATTTT+CGG | - | chr4_1:39774176-39774195 | None:intergenic | 20.0% |
| !!! | AAAGAAAATGTTAGAGATTT+TGG | + | chr4_1:39774451-39774470 | Msa0547060:CDS | 20.0% |
| !!! | AAAGTATAAGAATTCAGTTT+TGG | + | chr4_1:39774493-39774512 | Msa0547060:CDS | 20.0% |
| !!! | AAGTATAAGAATTCAGTTTT+GGG | + | chr4_1:39774494-39774513 | Msa0547060:CDS | 20.0% |
| !!! | ATTTTACTTTTCCAAGTTAT+AGG | + | chr4_1:39774552-39774571 | Msa0547060:CDS | 20.0% |
| !! | TTTATCAATAGTGATATCAT+AGG | - | chr4_1:39774621-39774640 | None:intergenic | 20.0% |
| !! | TCAAAATAGTAAGTTTGTAT+CGG | - | chr4_1:39775274-39775293 | None:intergenic | 20.0% |
| !! | CACATGTAAAAAATTATTAC+TGG | - | chr4_1:39775793-39775812 | None:intergenic | 20.0% |
| !! | AAAAAATAGACTTTCTTACT+TGG | - | chr4_1:39776574-39776593 | None:intergenic | 20.0% |
| !! | ATCATATAATGATCTAACAA+TGG | + | chr4_1:39776670-39776689 | Msa0547060:intron | 20.0% |
| !!! | GTATGAGATTATGTTTTAAT+CGG | - | chr4_1:39776886-39776905 | None:intergenic | 20.0% |
| !! | ATTGATATGATGTATTTAAG+AGG | + | chr4_1:39777671-39777690 | Msa0547060:CDS | 20.0% |
| !! | TTGATATGATGTATTTAAGA+GGG | + | chr4_1:39777672-39777691 | Msa0547060:CDS | 20.0% |
| ! | GATGGTTTAATTGTGATAAT+AGG | - | chr4_1:39771165-39771184 | None:intergenic | 25.0% |
| !!! | GTTTTATTCAGTGTAATTTG+TGG | - | chr4_1:39771306-39771325 | None:intergenic | 25.0% |
| ! | TTTATCTGTTTGAATCATGT+AGG | - | chr4_1:39771362-39771381 | None:intergenic | 25.0% |
| !! | AGGATCAACTATTAGTTTAA+TGG | + | chr4_1:39771476-39771495 | Msa0547060:intron | 25.0% |
| !!! | TCTAAAAGTGCATTTTTTAG+CGG | - | chr4_1:39771529-39771548 | None:intergenic | 25.0% |
| ! | TAGAAAAGGGTTATGAAATT+TGG | - | chr4_1:39771555-39771574 | None:intergenic | 25.0% |
| !!! | GGAACACATTTTTTAGAAAA+GGG | - | chr4_1:39771568-39771587 | None:intergenic | 25.0% |
| !!! | TGGAACACATTTTTTAGAAA+AGG | - | chr4_1:39771569-39771588 | None:intergenic | 25.0% |
| ! | CATAACCTTACCTATATAAA+TGG | - | chr4_1:39771589-39771608 | None:intergenic | 25.0% |
| ! | CATTTATATAGGTAAGGTTA+TGG | + | chr4_1:39771587-39771606 | Msa0547060:intron | 25.0% |
| !!! | TTCAATCATTGTCATTTTAG+CGG | + | chr4_1:39771804-39771823 | Msa0547060:intron | 25.0% |
| ! | AGATATGATATTCCATTGAA+AGG | - | chr4_1:39772123-39772142 | None:intergenic | 25.0% |
| ! | ATGGAATATCATATCTATAG+AGG | + | chr4_1:39772127-39772146 | Msa0547060:intron | 25.0% |
| ! | TGATGGCTAAAAAATAGATA+TGG | - | chr4_1:39772236-39772255 | None:intergenic | 25.0% |
| ! | AAACTGACCAAATTAATAAG+AGG | + | chr4_1:39772349-39772368 | Msa0547060:intron | 25.0% |
| ! | TGAAAAATGACTAATGTTCT+TGG | + | chr4_1:39772382-39772401 | Msa0547060:intron | 25.0% |
| ! | TCTTCCTTCAAAATTAATCA+AGG | + | chr4_1:39772640-39772659 | Msa0547060:intron | 25.0% |
| !! | TTGACCTTGATTAATTTTGA+AGG | - | chr4_1:39772647-39772666 | None:intergenic | 25.0% |
| !! | ATATATGCACCTATAGTTTT+AGG | + | chr4_1:39772815-39772834 | Msa0547060:intron | 25.0% |
| ! | TTTAAGGGAATTAAGTCAAA+AGG | - | chr4_1:39772992-39773011 | None:intergenic | 25.0% |
| !! | GAAAAGAAAAGCATGATTTA+AGG | - | chr4_1:39773008-39773027 | None:intergenic | 25.0% |
| ! | TTAAGGCTTAACTTATAGTT+TGG | + | chr4_1:39773074-39773093 | Msa0547060:intron | 25.0% |
| ! | TAAGGCTTAACTTATAGTTT+GGG | + | chr4_1:39773075-39773094 | Msa0547060:intron | 25.0% |
| ! | AAATTTGATGCCATAGAAAA+AGG | - | chr4_1:39773141-39773160 | None:intergenic | 25.0% |
| !! | TTTTTCTATGGCATCAAATT+TGG | + | chr4_1:39773140-39773159 | Msa0547060:intron | 25.0% |
| !! | GCTTTTAATATGGTATCTTA+TGG | + | chr4_1:39773162-39773181 | Msa0547060:intron | 25.0% |
| ! | ATATATACAAGTGGAAAAGT+AGG | - | chr4_1:39773254-39773273 | None:intergenic | 25.0% |
| ! | TCTTGAAATTTGAAGAGTAA+CGG | - | chr4_1:39773298-39773317 | None:intergenic | 25.0% |
| ! | AATATAGAAAACTAAAGGAG+AGG | - | chr4_1:39773327-39773346 | None:intergenic | 25.0% |
| ! | TTTCTATATTCATCTTCTAG+TGG | + | chr4_1:39773337-39773356 | Msa0547060:intron | 25.0% |
| ! | TACAATCACAAATTTGCAAA+AGG | - | chr4_1:39773424-39773443 | None:intergenic | 25.0% |
| ! | CAAATTTGTGATTGTAATCA+TGG | + | chr4_1:39773428-39773447 | Msa0547060:intron | 25.0% |
| !! | GTAATCATGGTTTAAAATTG+TGG | + | chr4_1:39773441-39773460 | Msa0547060:intron | 25.0% |
| ! | CTAAAACTCATGTTACAAAT+TGG | - | chr4_1:39773628-39773647 | None:intergenic | 25.0% |
| !! | TTGGTTCTTAAATCAATTGA+AGG | - | chr4_1:39773826-39773845 | None:intergenic | 25.0% |
| ! | AATTTCCAAAACAAAACCAT+TGG | + | chr4_1:39774080-39774099 | Msa0547060:CDS | 25.0% |
| ! | TAATGAACATGAAATCCAAA+TGG | + | chr4_1:39774123-39774142 | Msa0547060:CDS | 25.0% |
| ! | AATGAACATGAAATCCAAAT+GGG | + | chr4_1:39774124-39774143 | Msa0547060:CDS | 25.0% |
| !!! | AAAGTGTTTTTCTCTTGAAA+TGG | - | chr4_1:39774199-39774218 | None:intergenic | 25.0% |
| !! | GTAAAATCCTTTTGTCTAAA+TGG | - | chr4_1:39774539-39774558 | None:intergenic | 25.0% |
| ! | GACTTAAATTTCCTATAACT+TGG | - | chr4_1:39774566-39774585 | None:intergenic | 25.0% |
| ! | AAATTTAAGTCTAAAGAAGC+TGG | + | chr4_1:39774575-39774594 | Msa0547060:CDS | 25.0% |
| !!! | TTGATTTTCTTTCAAGTTCT+TGG | + | chr4_1:39774651-39774670 | Msa0547060:CDS | 25.0% |
| ! | TGACAAAAGGTCAAATATAA+AGG | + | chr4_1:39774977-39774996 | Msa0547060:intron | 25.0% |
| ! | GACAAAAGGTCAAATATAAA+GGG | + | chr4_1:39774978-39774997 | Msa0547060:intron | 25.0% |
| ! | TTTCACTACATTAAAGTAAG+TGG | - | chr4_1:39775379-39775398 | None:intergenic | 25.0% |
| ! | AAATAAGTCATTGTTTGACT+TGG | - | chr4_1:39775444-39775463 | None:intergenic | 25.0% |
| ! | AAGTCAAACAATGACTTATT+TGG | + | chr4_1:39775443-39775462 | Msa0547060:intron | 25.0% |
| ! | AAAAATTATTACTGGTGTCT+AGG | - | chr4_1:39775785-39775804 | None:intergenic | 25.0% |
| !!! | GATCTAAATTTTTCAAGAAG+TGG | - | chr4_1:39776172-39776191 | None:intergenic | 25.0% |
| ! | GAAAAATTTAGATCAACAGT+TGG | + | chr4_1:39776178-39776197 | Msa0547060:CDS | 25.0% |
| ! | TATTGATGTTAATGTGAGAA+AGG | + | chr4_1:39776438-39776457 | Msa0547060:CDS | 25.0% |
| ! | CTTCAGAAACTAATTCAAAT+GGG | + | chr4_1:39776473-39776492 | Msa0547060:CDS | 25.0% |
| !!! | AACTAAATTTTGGCTCATAT+AGG | + | chr4_1:39776644-39776663 | Msa0547060:intron | 25.0% |
| !!! | TAAGTCAATGTTTTAAAGAC+CGG | + | chr4_1:39776695-39776714 | Msa0547060:intron | 25.0% |
| !!! | AAATGAACCTACTAGTTTTA+TGG | - | chr4_1:39777171-39777190 | None:intergenic | 25.0% |
| ! | TTTATGTTTACATGAACATG+AGG | + | chr4_1:39777564-39777583 | Msa0547060:CDS | 25.0% |
| ! | ATTCCTAAATCAAGAACAAA+TGG | + | chr4_1:39777620-39777639 | Msa0547060:CDS | 25.0% |
| !!! | AAGTTTTTCAACTAACCATA+TGG | + | chr4_1:39777730-39777749 | Msa0547060:CDS | 25.0% |
| ! | TATTAGTGCAAAAGATAATG+TGG | + | chr4_1:39777766-39777785 | Msa0547060:CDS | 25.0% |
| ! | TGTGGTTAAGCATAATAAAA+TGG | + | chr4_1:39777784-39777803 | Msa0547060:CDS | 25.0% |
| !!! | GCATAATAAAATGGATTTTG+AGG | + | chr4_1:39777793-39777812 | Msa0547060:CDS | 25.0% |
| !! | TAGCTAAGTTGATAGTGATT+AGG | - | chr4_1:39771402-39771421 | None:intergenic | 30.0% |
| GTGTTCCATTTATATAGGTA+AGG | + | chr4_1:39771581-39771600 | Msa0547060:intron | 30.0% | |
| ATAATCGTGACACGATTATA+AGG | - | chr4_1:39771689-39771708 | None:intergenic | 30.0% | |
| TTATAATCGTGTCACGATTA+TGG | + | chr4_1:39771688-39771707 | Msa0547060:intron | 30.0% | |
| !!! | TGACACAATTTTTTTGGCAA+TGG | + | chr4_1:39771716-39771735 | Msa0547060:intron | 30.0% |
| ! | TGTCAATAAAGGTATGGTAT+TGG | - | chr4_1:39772478-39772497 | None:intergenic | 30.0% |
| TTAGACTGTCAATAAAGGTA+TGG | - | chr4_1:39772484-39772503 | None:intergenic | 30.0% | |
| GAAGTATATAGTATATGGTG+TGG | - | chr4_1:39772670-39772689 | None:intergenic | 30.0% | |
| CAAACACGAGAAAATAACAT+GGG | - | chr4_1:39772963-39772982 | None:intergenic | 30.0% | |
| ACAAACACGAGAAAATAACA+TGG | - | chr4_1:39772964-39772983 | None:intergenic | 30.0% | |
| AATTCTTGAGAAATCTGGTT+TGG | - | chr4_1:39773845-39773864 | None:intergenic | 30.0% | |
| ATTGGTTATTGTTGTCTTCT+TGG | - | chr4_1:39773942-39773961 | None:intergenic | 30.0% | |
| AAATCCAAATGGGATTTGAA+AGG | + | chr4_1:39774134-39774153 | Msa0547060:CDS | 30.0% | |
| !! | ATTTTCGGTTTGTTTGGATT+TGG | - | chr4_1:39774161-39774180 | None:intergenic | 30.0% |
| !!! | ACATTGATTTTCGGTTTGTT+TGG | - | chr4_1:39774167-39774186 | None:intergenic | 30.0% |
| !! | GGTTACGATTTTAAGTACTA+TGG | + | chr4_1:39774359-39774378 | Msa0547060:CDS | 30.0% |
| !! | ACGATTTTAAGTACTATGGA+AGG | + | chr4_1:39774363-39774382 | Msa0547060:CDS | 30.0% |
| ! | ATCTCTAACATTTTCTTTCC+AGG | - | chr4_1:39774449-39774468 | None:intergenic | 30.0% |
| !!! | AATTCAGTTTTGGGAAGTAT+TGG | + | chr4_1:39774503-39774522 | Msa0547060:CDS | 30.0% |
| !!! | ATTCAGTTTTGGGAAGTATT+GGG | + | chr4_1:39774504-39774523 | Msa0547060:CDS | 30.0% |
| ! | GATATTGCCATTTAGACAAA+AGG | + | chr4_1:39774529-39774548 | Msa0547060:CDS | 30.0% |
| CACTATTGATAAAATTGTGC+AGG | + | chr4_1:39774628-39774647 | Msa0547060:CDS | 30.0% | |
| ! | GAGTTTGATTTATATGCCAT+AGG | + | chr4_1:39774847-39774866 | Msa0547060:intron | 30.0% |
| GTCATTTATGTAGTGACAAA+AGG | + | chr4_1:39774964-39774983 | Msa0547060:intron | 30.0% | |
| !! | CTTTGGAATTCTGATTTCAA+AGG | - | chr4_1:39775526-39775545 | None:intergenic | 30.0% |
| GTTTGTTTGATTGCAAATAG+AGG | - | chr4_1:39775644-39775663 | None:intergenic | 30.0% | |
| ! | CTTCAAAAGTATAGAAATGC+AGG | + | chr4_1:39775911-39775930 | Msa0547060:CDS | 30.0% |
| ATCCAAAAGACAAAGAAACA+TGG | + | chr4_1:39775954-39775973 | Msa0547060:CDS | 30.0% | |
| TCCAAAAGACAAAGAAACAT+GGG | + | chr4_1:39775955-39775974 | Msa0547060:CDS | 30.0% | |
| !! | TACTGTTGTTTCTGATACAT+AGG | - | chr4_1:39776002-39776021 | None:intergenic | 30.0% |
| ! | CGGTTTAAGATCTTTGATTT+AGG | + | chr4_1:39776298-39776317 | Msa0547060:CDS | 30.0% |
| GCTTCAGAAACTAATTCAAA+TGG | + | chr4_1:39776472-39776491 | Msa0547060:CDS | 30.0% | |
| TAATTCAAATGGGACTACAT+TGG | + | chr4_1:39776483-39776502 | Msa0547060:CDS | 30.0% | |
| ! | CTTCTGTGTCTAAAGTTATT+TGG | + | chr4_1:39776521-39776540 | Msa0547060:CDS | 30.0% |
| ! | TGTGTCTAAAGTTATTTGGA+TGG | + | chr4_1:39776525-39776544 | Msa0547060:CDS | 30.0% |
| !! | TTTTAAAGACCGGTTAAATC+AGG | + | chr4_1:39776705-39776724 | Msa0547060:intron | 30.0% |
| GATCAAACCAATTGACAAAT+TGG | - | chr4_1:39776737-39776756 | None:intergenic | 30.0% | |
| AAATCATGGAAGTTTAACCT+AGG | + | chr4_1:39776937-39776956 | Msa0547060:intron | 30.0% | |
| ! | TACAATTTTCTCTTGCAGAT+TGG | + | chr4_1:39777000-39777019 | Msa0547060:intron | 30.0% |
| ! | TAGTGAATTTACCCTGTTTT+GGG | - | chr4_1:39777057-39777076 | None:intergenic | 30.0% |
| ! | TTAGTGAATTTACCCTGTTT+TGG | - | chr4_1:39777058-39777077 | None:intergenic | 30.0% |
| AATTTCATCTCCTAGATAGT+AGG | - | chr4_1:39777108-39777127 | None:intergenic | 30.0% | |
| AATTCCAATCACTTTCAACA+TGG | + | chr4_1:39777124-39777143 | Msa0547060:CDS | 30.0% | |
| AACTAGTAGGTTCATTTGAA+TGG | + | chr4_1:39777174-39777193 | Msa0547060:CDS | 30.0% | |
| TTGATCCATAGGTAGTAATA+AGG | - | chr4_1:39777329-39777348 | None:intergenic | 30.0% | |
| ! | AACAATTCTTGGTGTGTATA+GGG | - | chr4_1:39777414-39777433 | None:intergenic | 30.0% |
| TTGACAACTTCAACAATTCT+TGG | - | chr4_1:39777425-39777444 | None:intergenic | 30.0% | |
| AACTACAAGGTAATTGATGA+AGG | - | chr4_1:39777508-39777527 | None:intergenic | 30.0% | |
| TTCATCAATTACCTTGTAGT+TGG | + | chr4_1:39777507-39777526 | Msa0547060:CDS | 30.0% | |
| TCATCAATTACCTTGTAGTT+GGG | + | chr4_1:39777508-39777527 | Msa0547060:CDS | 30.0% | |
| AAAACTCTCTCCAATGTTTA+GGG | - | chr4_1:39777547-39777566 | None:intergenic | 30.0% | |
| TAAAACTCTCTCCAATGTTT+AGG | - | chr4_1:39777548-39777567 | None:intergenic | 30.0% | |
| TTGATTTAGGAATTTGAACC+GGG | - | chr4_1:39777613-39777632 | None:intergenic | 30.0% | |
| CTTGATTTAGGAATTTGAAC+CGG | - | chr4_1:39777614-39777633 | None:intergenic | 30.0% | |
| CAACCATTTGTTCTTGATTT+AGG | - | chr4_1:39777626-39777645 | None:intergenic | 30.0% | |
| CTAAATCAAGAACAAATGGT+TGG | + | chr4_1:39777624-39777643 | Msa0547060:CDS | 30.0% | |
| CTAAAATCATCCTTCAACAA+TGG | - | chr4_1:39777821-39777840 | None:intergenic | 30.0% | |
| ! | CATTGTTGAAGGATGATTTT+AGG | + | chr4_1:39777819-39777838 | Msa0547060:CDS | 30.0% |
| !! | GATTTTAGGAATTTTTTGCC+TGG | + | chr4_1:39777833-39777852 | Msa0547060:CDS | 30.0% |
| TGATTGAAAAGGTTCAAAGA+TGG | - | chr4_1:39777887-39777906 | None:intergenic | 30.0% | |
| !! | AATCAAGCTGTTTCTCTTAA+GGG | + | chr4_1:39777902-39777921 | Msa0547060:CDS | 30.0% |
| TTATAGTTCCCAAATCCCTT+AGG | + | chr4_1:39771102-39771121 | Msa0547060:CDS | 35.0% | |
| AAGAATACTAGTCCACCTAA+GGG | - | chr4_1:39771120-39771139 | None:intergenic | 35.0% | |
| AAAGAATACTAGTCCACCTA+AGG | - | chr4_1:39771121-39771140 | None:intergenic | 35.0% | |
| TAAACGAGTCAGTGTAAGAA+TGG | - | chr4_1:39771190-39771209 | None:intergenic | 35.0% | |
| !!! | TTGACGCTAGCTTTTAAACT+TGG | - | chr4_1:39771233-39771252 | None:intergenic | 35.0% |
| !! | AAGTTGATAGTGATTAGGTG+TGG | - | chr4_1:39771397-39771416 | None:intergenic | 35.0% |
| TTTAGCGGAAGATTGAAGAA+TGG | - | chr4_1:39771514-39771533 | None:intergenic | 35.0% | |
| !!! | GCATCGTGACACAATTTTTT+TGG | + | chr4_1:39771710-39771729 | Msa0547060:intron | 35.0% |
| !! | CATTTTAGCGGAAGATCTAA+AGG | + | chr4_1:39771816-39771835 | Msa0547060:intron | 35.0% |
| !! | AAGGTGCTTTTCCTCATTTT+AGG | + | chr4_1:39771835-39771854 | Msa0547060:intron | 35.0% |
| GACTTCTTGTCATAGGTAAA+AGG | - | chr4_1:39771976-39771995 | None:intergenic | 35.0% | |
| CTATCTAGACTTCTTGTCAT+AGG | - | chr4_1:39771983-39772002 | None:intergenic | 35.0% | |
| CATAAGACTGAAAGAAGTTG+GGG | - | chr4_1:39772061-39772080 | None:intergenic | 35.0% | |
| CCATAAGACTGAAAGAAGTT+GGG | - | chr4_1:39772062-39772081 | None:intergenic | 35.0% | |
| TCCATAAGACTGAAAGAAGT+TGG | - | chr4_1:39772063-39772082 | None:intergenic | 35.0% | |
| CATTGAAAGGAGATGAGAAT+TGG | - | chr4_1:39772110-39772129 | None:intergenic | 35.0% | |
| CAATTCTCATCTCCTTTCAA+TGG | + | chr4_1:39772108-39772127 | Msa0547060:intron | 35.0% | |
| ATAGTCAGTTTGCGTAACAT+CGG | - | chr4_1:39772175-39772194 | None:intergenic | 35.0% | |
| !! | AGAGAGTACTTACTTGTTGA+TGG | - | chr4_1:39772253-39772272 | None:intergenic | 35.0% |
| AGTAAGTACTCTCTCAATCA+TGG | + | chr4_1:39772259-39772278 | Msa0547060:intron | 35.0% | |
| !! | GTATGGTATTGGTGGAATAA+TGG | - | chr4_1:39772467-39772486 | None:intergenic | 35.0% |
| ! | CAATAAAGGTATGGTATTGG+TGG | - | chr4_1:39772475-39772494 | None:intergenic | 35.0% |
| GTTGCTTAGACTGTCAATAA+AGG | - | chr4_1:39772489-39772508 | None:intergenic | 35.0% | |
| GAGAGAATTCAAATGCATCT+TGG | - | chr4_1:39772511-39772530 | None:intergenic | 35.0% | |
| CACGAGATACCTAAAACTAT+AGG | - | chr4_1:39772827-39772846 | None:intergenic | 35.0% | |
| TTTGCTTCTTCAGCAAAACA+AGG | - | chr4_1:39772853-39772872 | None:intergenic | 35.0% | |
| !! | TTGTTTTGCTGAAGAAGCAA+AGG | + | chr4_1:39772852-39772871 | Msa0547060:intron | 35.0% |
| CCTTCACATATATTTCCCAT+TGG | - | chr4_1:39773190-39773209 | None:intergenic | 35.0% | |
| CCAATGGGAAATATATGTGA+AGG | + | chr4_1:39773187-39773206 | Msa0547060:intron | 35.0% | |
| TAGAAAACTAAAGGAGAGGA+TGG | - | chr4_1:39773323-39773342 | None:intergenic | 35.0% | |
| ! | GCAATCATGATCTGAAATTG+CGG | - | chr4_1:39773517-39773536 | None:intergenic | 35.0% |
| !! | GAGTTTTAGTCGAAATACGA+CGG | + | chr4_1:39773639-39773658 | Msa0547060:CDS | 35.0% |
| ATGTTGAATGACTATGTTGC+TGG | + | chr4_1:39773688-39773707 | Msa0547060:CDS | 35.0% | |
| !!! | TGATTTTTGAGGCTTGGTTT+TGG | - | chr4_1:39773719-39773738 | None:intergenic | 35.0% |
| AAAACCAAGCCTCAAAAATC+AGG | + | chr4_1:39773718-39773737 | Msa0547060:CDS | 35.0% | |
| !! | TTTGTTGTGCCTGATTTTTG+AGG | - | chr4_1:39773730-39773749 | None:intergenic | 35.0% |
| TGTGCAATTCTTGAGAAATC+TGG | - | chr4_1:39773850-39773869 | None:intergenic | 35.0% | |
| TCTCAAGAATTGCACAACAA+TGG | + | chr4_1:39773854-39773873 | Msa0547060:CDS | 35.0% | |
| ! | TGATAATGTCCTACAATGTG+TGG | - | chr4_1:39773898-39773917 | None:intergenic | 35.0% |
| AACAAGAGATGGAATTGTTG+TGG | - | chr4_1:39773970-39773989 | None:intergenic | 35.0% | |
| TCATTCTCACAAACAAGAGA+TGG | - | chr4_1:39773981-39774000 | None:intergenic | 35.0% | |
| ! | AAAGAGAGAGCTTTATGAAG+AGG | + | chr4_1:39774052-39774071 | Msa0547060:CDS | 35.0% |
| !!! | CACTTCCAATGGTTTTGTTT+TGG | - | chr4_1:39774088-39774107 | None:intergenic | 35.0% |
| CCAAACTTGATGAAAAGGTA+GGG | - | chr4_1:39774252-39774271 | None:intergenic | 35.0% | |
| ! | CCTACCTTTTCATCAAGTTT+GGG | + | chr4_1:39774250-39774269 | Msa0547060:CDS | 35.0% |
| TGGAAAGCTATAACGATTCA+CGG | + | chr4_1:39774318-39774337 | Msa0547060:CDS | 35.0% | |
| ACGGATAAGTTTCATAAGCT+CGG | + | chr4_1:39774337-39774356 | Msa0547060:CDS | 35.0% | |
| GTACTATGGAAGGTTTCAAA+TGG | + | chr4_1:39774373-39774392 | Msa0547060:CDS | 35.0% | |
| !! | GTTGATGATGATATGATACC+TGG | + | chr4_1:39774428-39774447 | Msa0547060:CDS | 35.0% |
| TCAATAGTGATATCATAGGC+AGG | - | chr4_1:39774617-39774636 | None:intergenic | 35.0% | |
| AGACAATATGATTGTACCTG+AGG | - | chr4_1:39774751-39774770 | None:intergenic | 35.0% | |
| !! | AAGTCATTGTTTGACTTGGA+TGG | - | chr4_1:39775440-39775459 | None:intergenic | 35.0% |
| ! | ACAAGTGTTTCTGAACCTAA+TGG | - | chr4_1:39775486-39775505 | None:intergenic | 35.0% |
| GACACTAGAGAAAAAGTCTT+TGG | - | chr4_1:39775543-39775562 | None:intergenic | 35.0% | |
| ! | TCTTTGTCTTTTGGATCTAC+TGG | - | chr4_1:39775950-39775969 | None:intergenic | 35.0% |
| CCAAAAGACAAAGAAACATG+GGG | + | chr4_1:39775956-39775975 | Msa0547060:CDS | 35.0% | |
| ATCTGGCTACATAACACAAT+GGG | + | chr4_1:39776075-39776094 | Msa0547060:CDS | 35.0% | |
| !!! | AGAGCGCATCTATTTTTTGA+GGG | - | chr4_1:39776111-39776130 | None:intergenic | 35.0% |
| !!! | AAGAGCGCATCTATTTTTTG+AGG | - | chr4_1:39776112-39776131 | None:intergenic | 35.0% |
| !!! | TTTTGGTTTGCAAAGAACGT+CGG | + | chr4_1:39776278-39776297 | Msa0547060:CDS | 35.0% |
| ! | AAGATCTTTGATTTAGGCGT+TGG | + | chr4_1:39776304-39776323 | Msa0547060:CDS | 35.0% |
| GAATACACTGCTTGTATAAC+TGG | - | chr4_1:39776361-39776380 | None:intergenic | 35.0% | |
| !! | AGCAGTGTATTCTAGTTTGA+AGG | + | chr4_1:39776369-39776388 | Msa0547060:CDS | 35.0% |
| !! | GCAGTGTATTCTAGTTTGAA+GGG | + | chr4_1:39776370-39776389 | Msa0547060:CDS | 35.0% |
| CCACAGTAATTACAACACTT+GGG | - | chr4_1:39776414-39776433 | None:intergenic | 35.0% | |
| TCCACAGTAATTACAACACT+TGG | - | chr4_1:39776415-39776434 | None:intergenic | 35.0% | |
| !!! | TACATTGGTTCTTTTGCCTA+GGG | + | chr4_1:39776498-39776517 | Msa0547060:CDS | 35.0% |
| GAACTAGCCAATTTGTCAAT+TGG | + | chr4_1:39776727-39776746 | Msa0547060:intron | 35.0% | |
| CGGTTTAATCTGTTTAATCG+TGG | - | chr4_1:39776866-39776885 | None:intergenic | 35.0% | |
| AGTCGTGATATTGAAGATAG+TGG | - | chr4_1:39776912-39776931 | None:intergenic | 35.0% | |
| ATCACGACTCTAACAAATCA+TGG | + | chr4_1:39776923-39776942 | Msa0547060:intron | 35.0% | |
| AACTATTGTGCATTACTCCT+AGG | - | chr4_1:39776957-39776976 | None:intergenic | 35.0% | |
| TCAACATCATAACCCAAAAC+AGG | + | chr4_1:39777042-39777061 | Msa0547060:CDS | 35.0% | |
| CAACATCATAACCCAAAACA+GGG | + | chr4_1:39777043-39777062 | Msa0547060:CDS | 35.0% | |
| ACAGGGTAAATTCACTAACA+AGG | + | chr4_1:39777060-39777079 | Msa0547060:CDS | 35.0% | |
| CTATCCATGTTGAAAGTGAT+TGG | - | chr4_1:39777131-39777150 | None:intergenic | 35.0% | |
| GAAGCAACCATAAAACTAGT+AGG | + | chr4_1:39777161-39777180 | Msa0547060:CDS | 35.0% | |
| !! | CTTAGTGTTTTTGATCCATG+TGG | - | chr4_1:39777200-39777219 | None:intergenic | 35.0% |
| CTAAGAAGAAGAATCATCCA+AGG | + | chr4_1:39777215-39777234 | Msa0547060:CDS | 35.0% | |
| TCTCACCTTATTACTACCTA+TGG | + | chr4_1:39777321-39777340 | Msa0547060:CDS | 35.0% | |
| TGAGTGCATATTTGATCCAT+AGG | - | chr4_1:39777340-39777359 | None:intergenic | 35.0% | |
| ! | CAACAATTCTTGGTGTGTAT+AGG | - | chr4_1:39777415-39777434 | None:intergenic | 35.0% |
| TTGTCAAAGAAAGACCGAAA+TGG | + | chr4_1:39777438-39777457 | Msa0547060:CDS | 35.0% | |
| AATTGTGTCGCATTCCATTT+CGG | - | chr4_1:39777455-39777474 | None:intergenic | 35.0% | |
| CAAGGTAATTGATGAAGGTA+AGG | - | chr4_1:39777503-39777522 | None:intergenic | 35.0% | |
| CATCAATTACCTTGTAGTTG+GGG | + | chr4_1:39777509-39777528 | Msa0547060:CDS | 35.0% | |
| ! | CAGTGTTTTTCCCTAAACAT+TGG | + | chr4_1:39777534-39777553 | Msa0547060:CDS | 35.0% |
| TGAAGATGCTAAGAAAAACC+CGG | + | chr4_1:39777592-39777611 | Msa0547060:CDS | 35.0% | |
| !! | CTTGCTTGGTTTGGAAAATT+TGG | - | chr4_1:39777713-39777732 | None:intergenic | 35.0% |
| ! | GTTGAAAAACTTGCTTGGTT+TGG | - | chr4_1:39777722-39777741 | None:intergenic | 35.0% |
| ! | GGTTAGTTGAAAAACTTGCT+TGG | - | chr4_1:39777727-39777746 | None:intergenic | 35.0% |
| GAGAAACAGCTTGATTGAAA+AGG | - | chr4_1:39777898-39777917 | None:intergenic | 35.0% | |
| !! | CAATCAAGCTGTTTCTCTTA+AGG | + | chr4_1:39777901-39777920 | Msa0547060:CDS | 35.0% |
| !! | GGTGGACTAGTATTCTTTGA+AGG | + | chr4_1:39771123-39771142 | Msa0547060:intron | 40.0% |
| GTCAGTGTAAGAATGGATGA+TGG | - | chr4_1:39771183-39771202 | None:intergenic | 40.0% | |
| AAGATTGAAGAATGGAGAGG+TGG | - | chr4_1:39771506-39771525 | None:intergenic | 40.0% | |
| ! | CAGAAATCGTGTCACGATTT+TGG | - | chr4_1:39771780-39771799 | None:intergenic | 40.0% |
| CCCAACTTCTTTCAGTCTTA+TGG | + | chr4_1:39772059-39772078 | Msa0547060:intron | 40.0% | |
| CCAGCTAGAAAGATAGAGAT+AGG | - | chr4_1:39772310-39772329 | None:intergenic | 40.0% | |
| ! | CCTATCTCTATCTTTCTAGC+TGG | + | chr4_1:39772307-39772326 | Msa0547060:intron | 40.0% |
| AATTAACCATGCAAGCCATG+AGG | + | chr4_1:39772542-39772561 | Msa0547060:intron | 40.0% | |
| GTTGATTGCCAAACTATAGC+GGG | - | chr4_1:39772582-39772601 | None:intergenic | 40.0% | |
| GGTTGATTGCCAAACTATAG+CGG | - | chr4_1:39772583-39772602 | None:intergenic | 40.0% | |
| CACGAGAAAATAACATGGGA+TGG | - | chr4_1:39772959-39772978 | None:intergenic | 40.0% | |
| ! | AAAAGGCAATGCTGCGTTTT+TGG | - | chr4_1:39773124-39773143 | None:intergenic | 40.0% |
| ATGGTATCTTATGGGTCCAA+TGG | + | chr4_1:39773171-39773190 | Msa0547060:intron | 40.0% | |
| TGGTATCTTATGGGTCCAAT+GGG | + | chr4_1:39773172-39773191 | Msa0547060:intron | 40.0% | |
| !!! | GAATTTTGAGGTCTCTGCAA+CGG | + | chr4_1:39773483-39773502 | Msa0547060:intron | 40.0% |
| TGCAATTAAGCCTGTATGAG+AGG | + | chr4_1:39773534-39773553 | Msa0547060:intron | 40.0% | |
| GTTAATTAGGCCTCTCATAC+AGG | - | chr4_1:39773547-39773566 | None:intergenic | 40.0% | |
| GTCATTCAACATTCCATCCA+AGG | - | chr4_1:39773680-39773699 | None:intergenic | 40.0% | |
| ATGATCACACCACACATTGT+AGG | + | chr4_1:39773886-39773905 | Msa0547060:CDS | 40.0% | |
| GGAATTGTTGTGGCTTGAAT+TGG | - | chr4_1:39773960-39773979 | None:intergenic | 40.0% | |
| ! | TTGAAGTGTCTCACTTCCAA+TGG | - | chr4_1:39774099-39774118 | None:intergenic | 40.0% |
| TGGACCTTTCAAATCCCATT+TGG | - | chr4_1:39774141-39774160 | None:intergenic | 40.0% | |
| ! | CCCTACCTTTTCATCAAGTT+TGG | + | chr4_1:39774249-39774268 | Msa0547060:CDS | 40.0% |
| CCCAAACTTGATGAAAAGGT+AGG | - | chr4_1:39774253-39774272 | None:intergenic | 40.0% | |
| AGCACCCAAACTTGATGAAA+AGG | - | chr4_1:39774257-39774276 | None:intergenic | 40.0% | |
| CGGATAAGTTTCATAAGCTC+GGG | + | chr4_1:39774338-39774357 | Msa0547060:CDS | 40.0% | |
| TTTGCAGACAGAAGCTGATT+TGG | + | chr4_1:39774397-39774416 | Msa0547060:CDS | 40.0% | |
| !! | AGATTTTGGCACATGTAGCT+GGG | + | chr4_1:39774465-39774484 | Msa0547060:CDS | 40.0% |
| ! | ACTCCTTTTACCTTCTCAAC+TGG | + | chr4_1:39774713-39774732 | Msa0547060:CDS | 40.0% |
| TCACCAGTTGAGAAGGTAAA+AGG | - | chr4_1:39774719-39774738 | None:intergenic | 40.0% | |
| CAAATCTTCACCAGTTGAGA+AGG | - | chr4_1:39774726-39774745 | None:intergenic | 40.0% | |
| AAATTATGGGGGTTCATGCA+TGG | - | chr4_1:39774875-39774894 | None:intergenic | 40.0% | |
| TGTCTGTGACAGGGTTTAAT+AGG | - | chr4_1:39775739-39775758 | None:intergenic | 40.0% | |
| TGTGAATGCAGTATCATGTC+CGG | - | chr4_1:39775762-39775781 | None:intergenic | 40.0% | |
| ! | TTTACATGTGTTGGTGCACT+AGG | + | chr4_1:39775803-39775822 | Msa0547060:intron | 40.0% |
| ! | TTACATGTGTTGGTGCACTA+GGG | + | chr4_1:39775804-39775823 | Msa0547060:intron | 40.0% |
| GGTTGAACGCTAAAACTTGT+CGG | + | chr4_1:39775825-39775844 | Msa0547060:intron | 40.0% | |
| ACACCAGAAACACATTCGAT+CGG | + | chr4_1:39775848-39775867 | Msa0547060:intron | 40.0% | |
| AATCCGATCGAATGTGTTTC+TGG | - | chr4_1:39775854-39775873 | None:intergenic | 40.0% | |
| ! | CCCCATGTTTCTTTGTCTTT+TGG | - | chr4_1:39775959-39775978 | None:intergenic | 40.0% |
| ! | TTCAAGTTCGCGATGATCAA+TGG | + | chr4_1:39776038-39776057 | Msa0547060:CDS | 40.0% |
| CATCTGGCTACATAACACAA+TGG | + | chr4_1:39776074-39776093 | Msa0547060:CDS | 40.0% | |
| AAAGCATACATTGTTGTCCC+TGG | + | chr4_1:39776205-39776224 | Msa0547060:CDS | 40.0% | |
| AAGGACAGAAATTTCCACCA+GGG | - | chr4_1:39776225-39776244 | None:intergenic | 40.0% | |
| CGTTCTTTGCAAACCAAAAG+AGG | - | chr4_1:39776277-39776296 | None:intergenic | 40.0% | |
| !! | TTAGGCGTTGGTTCAATTTC+CGG | + | chr4_1:39776316-39776335 | Msa0547060:CDS | 40.0% |
| ! | CCCAAGTGTTGTAATTACTG+TGG | + | chr4_1:39776411-39776430 | Msa0547060:CDS | 40.0% |
| !! | TGTGAGAAAGGCTTTGAAGA+TGG | + | chr4_1:39776450-39776469 | Msa0547060:CDS | 40.0% |
| !!! | CTACATTGGTTCTTTTGCCT+AGG | + | chr4_1:39776497-39776516 | Msa0547060:CDS | 40.0% |
| ! | TGGCTAGTTCCTGATTTAAC+CGG | - | chr4_1:39776717-39776736 | None:intergenic | 40.0% |
| ACTCTGCAGTCCAGTTAAAT+CGG | + | chr4_1:39776763-39776782 | Msa0547060:intron | 40.0% | |
| CTTGTTCAGTCCGATTTAAC+TGG | - | chr4_1:39776776-39776795 | None:intergenic | 40.0% | |
| CAGTTAAATCGGACTGAACA+AGG | + | chr4_1:39776774-39776793 | Msa0547060:intron | 40.0% | |
| GAACAAGGTTGAACTTGAAC+CGG | + | chr4_1:39776789-39776808 | Msa0547060:intron | 40.0% | |
| AACTTGAACCGGTTAAACCA+AGG | + | chr4_1:39776800-39776819 | Msa0547060:intron | 40.0% | |
| TGAACCAACCTTGGTTTAAC+CGG | - | chr4_1:39776811-39776830 | None:intergenic | 40.0% | |
| ! | TAAACCAAGGTTGGTTCAAC+TGG | + | chr4_1:39776813-39776832 | Msa0547060:intron | 40.0% |
| ATCTCCTAGATAGTAGGCAT+TGG | - | chr4_1:39777102-39777121 | None:intergenic | 40.0% | |
| AGAAGAAGAATCATCCAAGG+TGG | + | chr4_1:39777218-39777237 | Msa0547060:CDS | 40.0% | |
| TAAGAGCAGTGAGTGAAAGT+TGG | + | chr4_1:39777246-39777265 | Msa0547060:CDS | 40.0% | |
| CCAAAGTTGTCATCTGAAGA+TGG | - | chr4_1:39777275-39777294 | None:intergenic | 40.0% | |
| CCATCTTCAGATGACAACTT+TGG | + | chr4_1:39777272-39777291 | Msa0547060:CDS | 40.0% | |
| TGATGAAGGTAAGGTGTGTT+TGG | - | chr4_1:39777494-39777513 | None:intergenic | 40.0% | |
| TCAACTAACCATATGGAACC+AGG | + | chr4_1:39777737-39777756 | Msa0547060:CDS | 40.0% | |
| TTTGCACTAATATGTGCACC+TGG | - | chr4_1:39777758-39777777 | None:intergenic | 40.0% | |
| !!! | TTTTGAGGTGCCATTGTTGA+AGG | + | chr4_1:39777808-39777827 | Msa0547060:CDS | 40.0% |
| GATGGTAATCTTGAAGCTGA+AGG | - | chr4_1:39777869-39777888 | None:intergenic | 40.0% | |
| ! | GTTGCTGTTGATCATCATAC+TGG | + | chr4_1:39777989-39778008 | Msa0547060:CDS | 40.0% |
| TGACTCAAGGGATTGATCAG+AGG | - | chr4_1:39771069-39771088 | None:intergenic | 45.0% | |
| ! | CTTTGAGAGCTCTGACTCAA+GGG | - | chr4_1:39771081-39771100 | None:intergenic | 45.0% |
| ! | TCTTTGAGAGCTCTGACTCA+AGG | - | chr4_1:39771082-39771101 | None:intergenic | 45.0% |
| TAGTTCCCAAATCCCTTAGG+TGG | + | chr4_1:39771105-39771124 | Msa0547060:intron | 45.0% | |
| CTAGTCCACCTAAGGGATTT+GGG | - | chr4_1:39771113-39771132 | None:intergenic | 45.0% | |
| ACTAGTCCACCTAAGGGATT+TGG | - | chr4_1:39771114-39771133 | None:intergenic | 45.0% | |
| CGGAAGATTGAAGAATGGAG+AGG | - | chr4_1:39771509-39771528 | None:intergenic | 45.0% | |
| CAATGGCAAATGTGCTCATC+TGG | + | chr4_1:39771733-39771752 | Msa0547060:intron | 45.0% | |
| GTTTCCATTGACGTTGCAAG+TGG | - | chr4_1:39772333-39772352 | None:intergenic | 45.0% | |
| ! | AAGAAACCTCATGGCTTGCA+TGG | - | chr4_1:39772551-39772570 | None:intergenic | 45.0% |
| GTTCAACGCAAGAAACCTCA+TGG | - | chr4_1:39772560-39772579 | None:intergenic | 45.0% | |
| ! | CGCAGCATTGCCTTTTTCTA+TGG | + | chr4_1:39773128-39773147 | Msa0547060:intron | 45.0% |
| AGAAGTGGAGATTCCTTGGA+TGG | + | chr4_1:39773664-39773683 | Msa0547060:CDS | 45.0% | |
| !!! | TGTGCCTGATTTTTGAGGCT+TGG | - | chr4_1:39773725-39773744 | None:intergenic | 45.0% |
| !! | AGGTAGGGTTTGTTGAAGCA+AGG | - | chr4_1:39774237-39774256 | None:intergenic | 45.0% |
| CAAGTTTGGGTGCTTTCGTT+CGG | + | chr4_1:39774263-39774282 | Msa0547060:CDS | 45.0% | |
| AAGTTTGGGTGCTTTCGTTC+GGG | + | chr4_1:39774264-39774283 | Msa0547060:CDS | 45.0% | |
| GCTTTCCACGATTCTCTTGA+GGG | - | chr4_1:39774306-39774325 | None:intergenic | 45.0% | |
| AGCTTTCCACGATTCTCTTG+AGG | - | chr4_1:39774307-39774326 | None:intergenic | 45.0% | |
| !! | GAGATTTTGGCACATGTAGC+TGG | + | chr4_1:39774464-39774483 | Msa0547060:CDS | 45.0% |
| !!! | CAGTTTTGGGAAGTATTGGG+AGG | + | chr4_1:39774507-39774526 | Msa0547060:CDS | 45.0% |
| GTGATATCATAGGCAGGATC+AGG | - | chr4_1:39774611-39774630 | None:intergenic | 45.0% | |
| GTGCTCAACTAGTTGCCATT+AGG | + | chr4_1:39775468-39775487 | Msa0547060:intron | 45.0% | |
| TTAAACCCTGTCACAGACAC+CGG | + | chr4_1:39775740-39775759 | Msa0547060:intron | 45.0% | |
| AAGTTCGCGATGATCAATGG+TGG | + | chr4_1:39776041-39776060 | Msa0547060:CDS | 45.0% | |
| !! | TGGTGGAAAGCACTTTCATC+TGG | + | chr4_1:39776058-39776077 | Msa0547060:CDS | 45.0% |
| CAAGGACAGAAATTTCCACC+AGG | - | chr4_1:39776226-39776245 | None:intergenic | 45.0% | |
| ! | AGCTCTCAAATGGCCTCTTT+TGG | + | chr4_1:39776261-39776280 | Msa0547060:CDS | 45.0% |
| !! | TAGGCGTTGGTTCAATTTCC+GGG | + | chr4_1:39776317-39776336 | Msa0547060:CDS | 45.0% |
| ACTTTAGACACAGAAGCCCT+AGG | - | chr4_1:39776517-39776536 | None:intergenic | 45.0% | |
| ! | TAACTGGACTGCAGAGTACT+CGG | - | chr4_1:39776760-39776779 | None:intergenic | 45.0% |
| TGAACCGGTTAAACCAAGGT+TGG | + | chr4_1:39776804-39776823 | Msa0547060:intron | 45.0% | |
| GAAACCAGTTGAACCAACCT+TGG | - | chr4_1:39776820-39776839 | None:intergenic | 45.0% | |
| CTCACCAATGCCTACTATCT+AGG | + | chr4_1:39777095-39777114 | Msa0547060:CDS | 45.0% | |
| GGTTCATTTGAATGGCCACA+TGG | + | chr4_1:39777182-39777201 | Msa0547060:CDS | 45.0% | |
| GAGAGACTTGAGGGTCATAA+TGG | - | chr4_1:39777370-39777389 | None:intergenic | 45.0% | |
| ! | TCTTGGTGTGTATAGGGAGA+TGG | - | chr4_1:39777408-39777427 | None:intergenic | 45.0% |
| GAAGGTAAGGTGTGTTTGGA+TGG | - | chr4_1:39777490-39777509 | None:intergenic | 45.0% | |
| CAAATGGTTGGCAAGCTTCA+TGG | + | chr4_1:39777636-39777655 | Msa0547060:CDS | 45.0% | |
| TATGTGCACCTGGTTCCATA+TGG | - | chr4_1:39777748-39777767 | None:intergenic | 45.0% | |
| !!! | GCTGAAGGCATTTTCATTCC+AGG | - | chr4_1:39777854-39777873 | None:intergenic | 45.0% |
| CTTAAGGGACTTAAAGCTGC+TGG | + | chr4_1:39777917-39777936 | Msa0547060:CDS | 45.0% | |
| ! | TAAAGCTGCTGGTGCTAAGT+TGG | + | chr4_1:39777928-39777947 | Msa0547060:CDS | 45.0% |
| ! | AAAGCTGCTGGTGCTAAGTT+GGG | + | chr4_1:39777929-39777948 | Msa0547060:CDS | 45.0% |
| CAGAATCTTGAGCAGTGATG+AGG | - | chr4_1:39778019-39778038 | None:intergenic | 45.0% | |
| !!! | TTTATTTTATTTTTTAAATC+GGG | - | chr4_1:39772202-39772221 | None:intergenic | 5.0% |
| !! | TTGTATATATATAATATAAT+TGG | + | chr4_1:39773264-39773283 | Msa0547060:intron | 5.0% |
| !! | AAAAAAATATTATCATAAAA+TGG | - | chr4_1:39774810-39774829 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTTAACAAAAAT+TGG | + | chr4_1:39774821-39774840 | Msa0547060:intron | 5.0% |
| !! | ATATATAAAATAAAATTATG+GGG | - | chr4_1:39774887-39774906 | None:intergenic | 5.0% |
| !! | GTATATATAAAATAAAATTA+TGG | - | chr4_1:39774889-39774908 | None:intergenic | 5.0% |
| GCGTTGAACCCGCTATAGTT+TGG | + | chr4_1:39772571-39772590 | Msa0547060:intron | 50.0% | |
| CTGGTGAAGATTTGCACCTC+AGG | + | chr4_1:39774732-39774751 | Msa0547060:CDS | 50.0% | |
| GCATACATTGTTGTCCCTGG+TGG | + | chr4_1:39776208-39776227 | Msa0547060:CDS | 50.0% | |
| AAGCTGCAGCAGCTCTCAAA+TGG | + | chr4_1:39776251-39776270 | Msa0547060:CDS | 50.0% | |
| !! | AGGCGTTGGTTCAATTTCCG+GGG | + | chr4_1:39776318-39776337 | Msa0547060:CDS | 50.0% |
| ! | AACTGGACTGCAGAGTACTC+GGG | - | chr4_1:39776759-39776778 | None:intergenic | 50.0% |
| CTGCTCTTATGAGTCCACCT+TGG | - | chr4_1:39777235-39777254 | None:intergenic | 50.0% | |
| !! | GTTCTGGGAGAGAGACTTGA+GGG | - | chr4_1:39777379-39777398 | None:intergenic | 50.0% |
| !! | AGTTCTGGGAGAGAGACTTG+AGG | - | chr4_1:39777380-39777399 | None:intergenic | 50.0% |
| GGGAGATGGAAGAGAGTTCT+GGG | - | chr4_1:39777394-39777413 | None:intergenic | 50.0% | |
| AGGGAGATGGAAGAGAGTTC+TGG | - | chr4_1:39777395-39777414 | None:intergenic | 50.0% | |
| AACACTGCTCCCCAACTACA+AGG | - | chr4_1:39777521-39777540 | None:intergenic | 50.0% | |
| CGTCTCAGCAGCTCTTCTCA+TGG | + | chr4_1:39771940-39771959 | Msa0547060:intron | 55.0% | |
| CAGCAGCTCTTCTCATGGAG+AGG | + | chr4_1:39771945-39771964 | Msa0547060:intron | 55.0% | |
| CTGGCCACTTGCAACGTCAA+TGG | + | chr4_1:39772326-39772345 | Msa0547060:intron | 55.0% | |
| CGAAATACGACGGCGAGAAG+TGG | + | chr4_1:39773649-39773668 | Msa0547060:CDS | 55.0% | |
| GGCGAGAAGTGGAGATTCCT+TGG | + | chr4_1:39773660-39773679 | Msa0547060:CDS | 55.0% | |
| TTCGTTCGGGAGTCCAAACG+AGG | + | chr4_1:39774277-39774296 | Msa0547060:CDS | 55.0% | |
| GGGTTCATGCATGGCACCTA+TGG | - | chr4_1:39774866-39774885 | None:intergenic | 55.0% | |
| CATGTCCGGTGTCTGTGACA+GGG | - | chr4_1:39775748-39775767 | None:intergenic | 55.0% | |
| TCATGTCCGGTGTCTGTGAC+AGG | - | chr4_1:39775749-39775768 | None:intergenic | 55.0% | |
| ! | GCTGCTGCAGCTTGTTCACA+AGG | - | chr4_1:39776244-39776263 | None:intergenic | 55.0% |
| ! | TGCTGGTGCTAAGTTGGGAC+AGG | + | chr4_1:39777934-39777953 | Msa0547060:CDS | 55.0% |
| CTCTTGAGGGACGCCTCGTT+TGG | - | chr4_1:39774293-39774312 | None:intergenic | 60.0% | |
| GGCGTCCCTCAAGAGAATCG+TGG | + | chr4_1:39774298-39774317 | Msa0547060:CDS | 60.0% | |
| !! | TTCCGGGGTGTCGAACTCTG+AGG | + | chr4_1:39776333-39776352 | Msa0547060:CDS | 60.0% |
| TGCCTCAGAGTTCGACACCC+CGG | - | chr4_1:39776338-39776357 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 39771050 | 39778039 | 39771050 | ID=Msa0547060;Name=Msa0547060 |
| chr4_1 | mRNA | 39771050 | 39778039 | 39771050 | ID=Msa0547060-mRNA-1;Parent=Msa0547060;Name=Msa0547060-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|0.8|1|1|5|0|963 |
| chr4_1 | exon | 39771050 | 39771123 | 39771050 | ID=Msa0547060-mRNA-1:exon:10109;Parent=Msa0547060-mRNA-1 |
| chr4_1 | exon | 39773597 | 39773990 | 39773597 | ID=Msa0547060-mRNA-1:exon:10110;Parent=Msa0547060-mRNA-1 |
| chr4_1 | exon | 39774023 | 39774753 | 39774023 | ID=Msa0547060-mRNA-1:exon:10111;Parent=Msa0547060-mRNA-1 |
| chr4_1 | exon | 39775904 | 39776574 | 39775904 | ID=Msa0547060-mRNA-1:exon:10112;Parent=Msa0547060-mRNA-1 |
| chr4_1 | exon | 39777018 | 39778039 | 39777018 | ID=Msa0547060-mRNA-1:exon:10113;Parent=Msa0547060-mRNA-1 |
| chr4_1 | CDS | 39771050 | 39771123 | 39771050 | ID=Msa0547060-mRNA-1:cds;Parent=Msa0547060-mRNA-1 |
| chr4_1 | CDS | 39773597 | 39773990 | 39773597 | ID=Msa0547060-mRNA-1:cds;Parent=Msa0547060-mRNA-1 |
| chr4_1 | CDS | 39774023 | 39774753 | 39774023 | ID=Msa0547060-mRNA-1:cds;Parent=Msa0547060-mRNA-1 |
| chr4_1 | CDS | 39775904 | 39776574 | 39775904 | ID=Msa0547060-mRNA-1:cds;Parent=Msa0547060-mRNA-1 |
| chr4_1 | CDS | 39777018 | 39778039 | 39777018 | ID=Msa0547060-mRNA-1:cds;Parent=Msa0547060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
