AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0594050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 287 sgRNAs with CRISPR-Local

Find 608 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGTTTCAATTTAGATTT+TGG 0.133418 4_2:+21087832 Msa0594050:three_prime_UTR
TACATCCTGCTATTATTATT+TGG 0.167699 4_2:-21087855 None:intergenic
CAACTCTTGATCTGTAATTC+TGG 0.172835 4_2:-21087369 None:intergenic
TTACCCTCTGTTGGAGAATT+TGG 0.188202 4_2:+21086994 Msa0594050:three_prime_UTR
AACGGTTACCGGAGAGAAAA+TGG 0.205781 4_2:-21083968 None:intergenic
GCATACCCCTCACATTTAAT+TGG 0.234093 4_2:-21086873 None:intergenic
TGACTTTAGAGTAATGTAAA+AGG 0.237204 4_2:-21092177 None:intergenic
TGAACGGAGGAGAAGAAGTT+AGG 0.266525 4_2:-21084003 None:intergenic
GCGGCGAGTTGCGGTGGTTT+TGG 0.267735 4_2:-21084060 None:intergenic
AAGAAAAGAACTCGAAATAT+TGG 0.272591 4_2:+21088881 Msa0594050:three_prime_UTR
AAAATTACAGGAGGTTTGTT+TGG 0.274922 4_2:+21092231 Msa0594050:three_prime_UTR
GGACGTGTATGGAGAACTTT+TGG 0.278484 4_2:+21089771 Msa0594050:three_prime_UTR
TCAAGTGAAACTTCCTATTC+TGG 0.278901 4_2:+21088662 Msa0594050:three_prime_UTR
CCAACAGAGGGTAAAACTTC+TGG 0.283471 4_2:-21086985 None:intergenic
TTCAAGAAAGTGAATTGTTT+TGG 0.283494 4_2:-21092131 None:intergenic
GAGGCCTTGCTATACGTATC+TGG 0.288912 4_2:-21087302 None:intergenic
ATTACTTCAGCACATGCTTT+TGG 0.292122 4_2:-21087629 None:intergenic
CCTATATTAAGTGGTTATTC+TGG 0.299020 4_2:+21088701 Msa0594050:three_prime_UTR
TGCGTAAGCTATAAAATTAC+AGG 0.302650 4_2:+21092219 Msa0594050:three_prime_UTR
CAAACCTCACAATGTTGATT+TGG 0.320944 4_2:+21086939 Msa0594050:three_prime_UTR
ATCAGTTGCTTCCGCGATAT+TGG 0.327434 4_2:+21087345 Msa0594050:three_prime_UTR
ATTCAGGAGCCTCCTGTGTT+TGG 0.329853 4_2:+21089490 Msa0594050:intron
TGTGGAATTGAAGTTGAAAA+TGG 0.332556 4_2:+21084260 Msa0594050:CDS
CAACTGCAAGCTGGCGATAC+TGG 0.336996 4_2:+21087916 Msa0594050:three_prime_UTR
TCTTGCCCACTATTCTCTTC+AGG 0.340208 4_2:-21092102 None:intergenic
ATAGGCGGCGGTGGTGGTGG+CGG 0.340365 4_2:-21084082 None:intergenic
TGCCCTTCCCACTTGGTGGC+TGG 0.342375 4_2:-21091559 None:intergenic
ACAACACTTGGCTTAACTTC+TGG 0.343319 4_2:-21088995 None:intergenic
CCCTGAGGGGAAACTTATAA+TGG 0.343393 4_2:+21088498 Msa0594050:three_prime_UTR
AGAGTTGGCCTAGGAGGTTT+AGG 0.345670 4_2:-21087243 None:intergenic
TTCCCTTGGATTCAATTCAT+TGG 0.348370 4_2:-21089904 None:intergenic
GTTCCGGTCACAGTTGGTTA+TGG 0.348632 4_2:-21084107 None:intergenic
CACTGGAGCTGAAACTTACT+TGG 0.350730 4_2:+21088942 Msa0594050:three_prime_UTR
AATGAAAAGCCTAATGAATC+TGG 0.351647 4_2:+21086800 Msa0594050:three_prime_UTR
ACTTTCTAGAGAGCGCATTT+AGG 0.352085 4_2:-21088760 None:intergenic
TCAAGAGTTGCAGCAAATAT+CGG 0.354064 4_2:+21087382 Msa0594050:three_prime_UTR
CGACATTTAACTCCAGTTGA+TGG 0.354939 4_2:+21091749 Msa0594050:three_prime_UTR
CGGAACTTCCCTCAAACTTC+TGG 0.357724 4_2:+21084124 Msa0594050:CDS
TTTGCTGTTCCAGATTCATT+AGG 0.360782 4_2:-21086809 None:intergenic
TTACTTGAATCTAATTCATT+TGG 0.362360 4_2:-21091793 None:intergenic
TTGTCTTCCCTCACTCTCAT+TGG 0.362735 4_2:-21092031 None:intergenic
ATGTGAGGGGTATGCAAGTT+GGG 0.375012 4_2:+21086881 Msa0594050:three_prime_UTR
TCCCTTGGATTCAATTCATT+GGG 0.378007 4_2:-21089903 None:intergenic
AGGACATTATGAAAGGGATT+TGG 0.378577 4_2:-21087150 None:intergenic
TTAGCAAATGCTGCGGTACT+TGG 0.380392 4_2:+21091446 Msa0594050:three_prime_UTR
GTCTACTTCTGATTCATCCT+TGG 0.381182 4_2:-21091717 None:intergenic
AGGCCCTCAGGTTGAGAGAT+AGG 0.381204 4_2:-21087774 None:intergenic
AAATTACAGGAGGTTTGTTT+GGG 0.383291 4_2:+21092232 Msa0594050:three_prime_UTR
CAGAAGTTTGAGGGAAGTTC+CGG 0.386153 4_2:-21084123 None:intergenic
ATTACCTGTGCAAGTACTTC+AGG 0.390989 4_2:+21086300 Msa0594050:three_prime_UTR
ATATTTGTGGTACGATCTAC+TGG 0.393389 4_2:+21089523 Msa0594050:three_prime_UTR
TGGCCTTCTTCAGTCTCAAA+AGG 0.396098 4_2:+21088721 Msa0594050:three_prime_UTR
GCTCTGGATCGTGAATCTTC+TGG 0.398177 4_2:+21091413 Msa0594050:three_prime_UTR
ACTTACTTGGGAAGAGGCTC+AGG 0.399619 4_2:+21088955 Msa0594050:three_prime_UTR
GTCATCATGCTCAGAGTGTT+TGG 0.401168 4_2:-21091895 None:intergenic
GGCGGCGGTGGTGGTGGCGG+CGG 0.401662 4_2:-21084079 None:intergenic
GAGATAGGCGGCGGTGGTGG+TGG 0.402402 4_2:-21084085 None:intergenic
GGAAACTTATAATGGGGTTC+AGG 0.403096 4_2:+21088506 Msa0594050:three_prime_UTR
GAACGGAGGAGAAGAAGTTA+GGG 0.405947 4_2:-21084002 None:intergenic
TCACAGTTGGTTATGGAGAT+AGG 0.408387 4_2:-21084100 None:intergenic
CCAGAATAACCACTTAATAT+AGG 0.414414 4_2:-21088701 None:intergenic
TCTGGTTTGATTTCTCTAGA+AGG 0.414545 4_2:-21086967 None:intergenic
ACTCTATCTCCAGGCTTAGA+AGG 0.416607 4_2:+21087261 Msa0594050:three_prime_UTR
TGAATTGAATCCAAGGGAAC+TGG 0.417947 4_2:+21089908 Msa0594050:three_prime_UTR
TCATTCTCCGAACCATCAAC+TGG 0.418732 4_2:-21091761 None:intergenic
AGAAAAGAACTCGAAATATT+GGG 0.421447 4_2:+21088882 Msa0594050:three_prime_UTR
GGTGACGTTAGCTTTGATTC+CGG 0.422066 4_2:+21084145 Msa0594050:CDS
TATAGCTATTATATGTATAG+TGG 0.423994 4_2:-21092297 None:intergenic
TGCTTCTGCAGTTCATGAAC+AGG 0.426089 4_2:+21092071 Msa0594050:three_prime_UTR
CTTGAATTGCCAACCGGATC+GGG 0.426831 4_2:+21091855 Msa0594050:three_prime_UTR
GGGAATTATGCAGAAAATGA+TGG 0.428592 4_2:+21086901 Msa0594050:three_prime_UTR
TCTCCATACACGTCCACTTA+GGG 0.429073 4_2:-21089763 None:intergenic
AACTCTTGATCTGTAATTCT+GGG 0.432750 4_2:-21087368 None:intergenic
GGCAAGCCAGAGGCCAGCTC+TGG 0.433133 4_2:+21091397 Msa0594050:three_prime_UTR
AATGTCACCTCCACTTCTAT+TGG 0.433907 4_2:+21087197 Msa0594050:three_prime_UTR
GCTTGCATGTCTTCCCGATC+CGG 0.434187 4_2:-21091868 None:intergenic
ATGTTCCATGCAAAAGAATC+TGG 0.435693 4_2:+21086089 Msa0594050:three_prime_UTR
CCTGTGTTTCCTTCTAAGCC+TGG 0.440594 4_2:-21087270 None:intergenic
AAGCATCAGCCACTTGGTCT+TGG 0.442263 4_2:-21091816 None:intergenic
ATTCTCATAAACACCAGAAT+AGG 0.444115 4_2:-21088675 None:intergenic
TTCACTTGAATGAGAACCAT+TGG 0.445941 4_2:-21088648 None:intergenic
TAATGTCCTTGTTGATGAAA+GGG 0.448219 4_2:+21087164 Msa0594050:three_prime_UTR
CACGATCCAGAGCTGGCCTC+TGG 0.448625 4_2:-21091403 None:intergenic
TTCTTCTCAGGAACCAGCAC+AGG 0.450915 4_2:-21088863 None:intergenic
CCCATTATAAGTTTCCCCTC+AGG 0.451841 4_2:-21088499 None:intergenic
GACTTTAGAGTAATGTAAAA+GGG 0.452325 4_2:-21092176 None:intergenic
ATTCCTTCCCGTCCTTCGGC+AGG 0.452578 4_2:-21087324 None:intergenic
AAAATGATGGGATGAGGTAC+TGG 0.452920 4_2:+21086914 Msa0594050:three_prime_UTR
TGCTGGTCGAATTGGTCGCT+TGG 0.454425 4_2:+21087601 Msa0594050:three_prime_UTR
AATGTGAGGGGTATGCAAGT+TGG 0.455328 4_2:+21086880 Msa0594050:three_prime_UTR
TTTAACTCCAGTTGATGGTT+CGG 0.456293 4_2:+21091754 Msa0594050:three_prime_UTR
ATGGAGATAGGCGGCGGTGG+TGG 0.456401 4_2:-21084088 None:intergenic
AAGGCCTCCTGCCGAAGGAC+GGG 0.456975 4_2:+21087317 Msa0594050:three_prime_UTR
AAAAGATTATCCAGTTCCCT+TGG 0.457180 4_2:-21089918 None:intergenic
CAACAAGACACCCTCGTCAT+AGG 0.457379 4_2:+21091510 Msa0594050:three_prime_UTR
CAATTTCATCGTGAGTCAAA+TGG 0.458649 4_2:+21087033 Msa0594050:three_prime_UTR
ACTGATTCCTTCCCGTCCTT+CGG 0.462205 4_2:-21087328 None:intergenic
ATAATGTCCTTGTTGATGAA+AGG 0.463710 4_2:+21087163 Msa0594050:three_prime_UTR
CCTTGCAAGCATCAGCCACT+TGG 0.463936 4_2:-21091822 None:intergenic
GGCCTTCTTCAGTCTCAAAA+GGG 0.464157 4_2:+21088722 Msa0594050:three_prime_UTR
TGGAAAGAAGAGTATATTTG+TGG 0.465676 4_2:+21089510 Msa0594050:three_prime_UTR
TGTTGCATGAACGTTGTTTG+TGG 0.466630 4_2:+21084291 Msa0594050:CDS
CAGTTGCATAGACTGAATAC+AGG 0.468777 4_2:-21087899 None:intergenic
CCTGAGGGGAAACTTATAAT+GGG 0.471341 4_2:+21088499 Msa0594050:three_prime_UTR
GAGAATATACCTATATTAAG+TGG 0.472374 4_2:+21088692 Msa0594050:three_prime_UTR
AACAAATTCTGCTTCAGTAC+AGG 0.472669 4_2:+21088534 Msa0594050:three_prime_UTR
TGTTTGCCCTTCCCACTTGG+TGG 0.481303 4_2:-21091563 None:intergenic
GCAAGTGATGCTGGTCGAAT+TGG 0.484028 4_2:+21087593 Msa0594050:three_prime_UTR
CAAGAGTTGCAGCAAATATC+GGG 0.484696 4_2:+21087383 Msa0594050:three_prime_UTR
GGAGATGATGCAAGTGACTC+TGG 0.485895 4_2:+21091467 Msa0594050:three_prime_UTR
CCAAGTGGCTGATGCTTGCA+AGG 0.486061 4_2:+21091822 Msa0594050:three_prime_UTR
CCTCACAATGTTGATTTGGA+TGG 0.486454 4_2:+21086943 Msa0594050:three_prime_UTR
AGACACCCTCGTCATAGGCC+TGG 0.487047 4_2:+21091515 Msa0594050:three_prime_UTR
GACAGTCCTGAAGAGAATAG+TGG 0.489705 4_2:+21092096 Msa0594050:three_prime_UTR
TAGCCAGAGATATGCACTGC+TGG 0.491104 4_2:-21086849 None:intergenic
CGATTCGGTGGCGGAAAGGT+TGG 0.493342 4_2:+21084325 Msa0594050:CDS
TATTGATAGCGAGGATGCAC+TGG 0.493835 4_2:+21088925 Msa0594050:three_prime_UTR
GTGGAACCTCTACGTCGATT+CGG 0.494921 4_2:+21084310 Msa0594050:CDS
TTCCCAGCAGTGCATATCTC+TGG 0.498864 4_2:+21086846 Msa0594050:three_prime_UTR
TTTGGCCAAATAATAATAGC+AGG 0.500753 4_2:+21087850 Msa0594050:three_prime_UTR
ATCAACAAGGACATTATGAA+AGG 0.502025 4_2:-21087157 None:intergenic
GAGACATACCTGAAGCAAAA+TGG 0.503082 4_2:+21091946 Msa0594050:three_prime_UTR
GTGAGTCAAATGGTTCATCT+AGG 0.506203 4_2:+21087043 Msa0594050:three_prime_UTR
GGCTAACCAATTAAATGTGA+GGG 0.506229 4_2:+21086867 Msa0594050:three_prime_UTR
CGGAGGAGAAGAAGTTAGGG+AGG 0.506566 4_2:-21083999 None:intergenic
TCACTTGAATGAGAACCATT+GGG 0.509159 4_2:-21088647 None:intergenic
GTTGTCTTTACCACCTGTGC+TGG 0.513012 4_2:+21088850 Msa0594050:three_prime_UTR
CAAGGCCTCCTGCCGAAGGA+CGG 0.513301 4_2:+21087316 Msa0594050:three_prime_UTR
CCTTCCCGTCCTTCGGCAGG+AGG 0.513659 4_2:-21087321 None:intergenic
GTGGTGGCGGCGGCGAGTTG+CGG 0.513671 4_2:-21084069 None:intergenic
TGCTTCAGGTATGTCTCCAA+CGG 0.513673 4_2:-21091940 None:intergenic
GCTTCAGGTATGTCTCCAAC+GGG 0.514701 4_2:-21091939 None:intergenic
CAGTCTATGCAACTGCAAGC+TGG 0.514895 4_2:+21087907 Msa0594050:three_prime_UTR
CCTGGAGATAGAGTTGGCCT+AGG 0.516685 4_2:-21087252 None:intergenic
TGCAGTAACATTTAGCCGTA+TGG 0.517779 4_2:+21088474 Msa0594050:intron
ACTTGAATTGCCAACCGGAT+CGG 0.518323 4_2:+21091854 Msa0594050:three_prime_UTR
AAATTCAGCTTCAAATGTGC+AGG 0.519112 4_2:+21091999 Msa0594050:three_prime_UTR
TCTCCATAACCAACTGTGAC+CGG 0.520011 4_2:+21084104 Msa0594050:CDS
TTCTAGAGAGCGCATTTAGG+TGG 0.520190 4_2:-21088757 None:intergenic
CCCTCCTATCTCTCAACCTG+AGG 0.521917 4_2:+21087770 Msa0594050:three_prime_UTR
TAAATGCGCTCTCTAGAAAG+TGG 0.523105 4_2:+21088762 Msa0594050:three_prime_UTR
TTGTGTTTGCCCTTCCCACT+TGG 0.523559 4_2:-21091566 None:intergenic
ATTAGACTTGAATTGCCAAC+CGG 0.524003 4_2:+21091849 Msa0594050:three_prime_UTR
GTGGCGGCGGCGAGTTGCGG+TGG 0.525255 4_2:-21084066 None:intergenic
GCAAGATATATATGAATCAC+TGG 0.525449 4_2:+21087089 Msa0594050:three_prime_UTR
CTAACGTCACCAGAAGTTTG+AGG 0.527835 4_2:-21084133 None:intergenic
ACGGTTACCGGAGAGAAAAT+GGG 0.527913 4_2:-21083967 None:intergenic
CCGATCTATGTGATAAGTGC+GGG 0.529734 4_2:+21084370 Msa0594050:three_prime_UTR
ATGTAGAAATGCCTGAAAGC+AGG 0.533071 4_2:+21088816 Msa0594050:three_prime_UTR
AGGCCTTGCTATACGTATCT+GGG 0.533919 4_2:-21087301 None:intergenic
TTCAACTCCTTGCCTCACAC+TGG 0.534815 4_2:-21092350 None:intergenic
TCCTCGATCATGACAACACT+TGG 0.535986 4_2:-21089007 None:intergenic
GAGTGAGGGAAGACAAAATG+AGG 0.539623 4_2:+21092038 Msa0594050:three_prime_UTR
CTCCCAATGAATTGAATCCA+AGG 0.539749 4_2:+21089901 Msa0594050:three_prime_UTR
ACATAGATCGGCAAATTCAC+CGG 0.541892 4_2:-21084358 None:intergenic
TCAACAAGGACATTATGAAA+GGG 0.542098 4_2:-21087156 None:intergenic
TAACGTCACCAGAAGTTTGA+GGG 0.542956 4_2:-21084132 None:intergenic
ATGCTTAGTGCAAGTGATGC+TGG 0.543355 4_2:+21087584 Msa0594050:three_prime_UTR
CCTAGGCCAACTCTATCTCC+AGG 0.543621 4_2:+21087252 Msa0594050:three_prime_UTR
TTCTCCATACACGTCCACTT+AGG 0.543699 4_2:-21089764 None:intergenic
CAGTTGGTGCTGACATGGAT+TGG 0.544785 4_2:+21088789 Msa0594050:three_prime_UTR
GAAGATTCACGATCCAGAGC+TGG 0.546355 4_2:-21091410 None:intergenic
AAAGAAGAGAAAGAAGAGAG+AGG 0.547257 4_2:-21083874 None:intergenic
GAAGAAAGAAAGAGAAGGTG+AGG 0.550740 4_2:-21083945 None:intergenic
ATACGCAAAGGAAGGCCCTC+AGG 0.550975 4_2:-21087786 None:intergenic
GTTATGGAGATAGGCGGCGG+TGG 0.554715 4_2:-21084091 None:intergenic
ATTTGGCAAAGGAGCGGTAA+GGG 0.556170 4_2:-21087133 None:intergenic
AGCACCCAGGCCTATGACGA+GGG 0.556180 4_2:-21091520 None:intergenic
GATGATTATACTTCAAGACT+TGG 0.556252 4_2:-21083823 None:intergenic
GACACCCTCGTCATAGGCCT+GGG 0.556520 4_2:+21091516 Msa0594050:three_prime_UTR
CCATTATAAGTTTCCCCTCA+GGG 0.557442 4_2:-21088498 None:intergenic
AAGTCCTGAAGTACTTGCAC+AGG 0.558364 4_2:-21086304 None:intergenic
ATGATGCAAGTGACTCTGGC+AGG 0.558412 4_2:+21091471 Msa0594050:three_prime_UTR
GAACTCAGTTGGTGCTGACA+TGG 0.559385 4_2:+21088784 Msa0594050:three_prime_UTR
AAGATGTGAAAGGAAAAGAA+TGG 0.562266 4_2:+21087811 Msa0594050:three_prime_UTR
TTTCCGTCTAATATGCCCAA+TGG 0.563491 4_2:+21088632 Msa0594050:three_prime_UTR
GATCGGGAAGACATGCAAGC+TGG 0.563741 4_2:+21091871 Msa0594050:three_prime_UTR
GTTTCCCCTCAGGGTCCATA+CGG 0.563865 4_2:-21088489 None:intergenic
CTTGGCTTAACTTCTGGAGG+TGG 0.565044 4_2:-21088989 None:intergenic
CAAGAAACAAAGACAAGCAT+CGG 0.565134 4_2:+21091376 Msa0594050:three_prime_UTR
CCCGCACTTATCACATAGAT+CGG 0.565675 4_2:-21084370 None:intergenic
GCTGAAACTTACTTGGGAAG+AGG 0.565759 4_2:+21088949 Msa0594050:three_prime_UTR
ATGTATTAATATATTACCAC+TGG 0.566468 4_2:-21092389 None:intergenic
TATCCAGCCACCAAGTGGGA+AGG 0.566881 4_2:+21091556 Msa0594050:three_prime_UTR
TTCAAAGAGTGGCACAATGG+TGG 0.567209 4_2:-21087559 None:intergenic
AAAGGTTGGATTCTTCGATC+CGG 0.567319 4_2:+21084339 Msa0594050:CDS
AGCCAGAGATATGCACTGCT+GGG 0.567325 4_2:-21086848 None:intergenic
ATGCAGAAAATGATGGGATG+AGG 0.568840 4_2:+21086908 Msa0594050:three_prime_UTR
ATCCAGCCACCAAGTGGGAA+GGG 0.569945 4_2:+21091557 Msa0594050:three_prime_UTR
TTCTCAGGAACCAGCACAGG+TGG 0.570575 4_2:-21088860 None:intergenic
CCTCCTATCTCTCAACCTGA+GGG 0.572708 4_2:+21087771 Msa0594050:three_prime_UTR
ACGTCGATTCGGTGGCGGAA+AGG 0.573751 4_2:+21084321 Msa0594050:CDS
GCGTGGAGAGAGAGTTTGAA+CGG 0.574446 4_2:-21084019 None:intergenic
ACTTATAATGGGGTTCAGGA+AGG 0.575522 4_2:+21088510 Msa0594050:three_prime_UTR
CCTCTACGTCGATTCGGTGG+CGG 0.575763 4_2:+21084316 Msa0594050:CDS
AGGGAAGTTCCGGTCACAGT+TGG 0.576253 4_2:-21084113 None:intergenic
GATTTGGCAAAGGAGCGGTA+AGG 0.576714 4_2:-21087134 None:intergenic
TGTCTTGTTGTGGTCAACAC+TGG 0.577354 4_2:-21091497 None:intergenic
TCTAGAAAGTGGAACTCAGT+TGG 0.578317 4_2:+21088773 Msa0594050:three_prime_UTR
GGAGATAGAGTTGGCCTAGG+AGG 0.578335 4_2:-21087249 None:intergenic
TCTAGAGAGCGCATTTAGGT+GGG 0.579194 4_2:-21088756 None:intergenic
TCCATGCAAAAGAATCTGGT+TGG 0.579415 4_2:+21086093 Msa0594050:three_prime_UTR
GGAATTATGCAGAAAATGAT+GGG 0.581193 4_2:+21086902 Msa0594050:three_prime_UTR
GCATGTCTTCCCGATCCGGT+TGG 0.581547 4_2:-21091864 None:intergenic
CCTCAGGTTGAGAGATAGGA+GGG 0.582109 4_2:-21087770 None:intergenic
TCTAAGCCTGGAGATAGAGT+TGG 0.583408 4_2:-21087258 None:intergenic
TCAAATGGTTCATCTAGGAC+TGG 0.583729 4_2:+21087048 Msa0594050:three_prime_UTR
GATCTAGACGCCAATAGAAG+TGG 0.585121 4_2:-21087207 None:intergenic
TATCTGCAGCGTCTCCATTG+TGG 0.587990 4_2:+21086222 Msa0594050:intron
ATAGCAAGGCCTCCTGCCGA+AGG 0.591462 4_2:+21087312 Msa0594050:three_prime_UTR
AATGGGAAGAAAGAAAGAGA+AGG 0.592521 4_2:-21083950 None:intergenic
ATACTCTTCTTTCCAAACAC+AGG 0.593392 4_2:-21089502 None:intergenic
GTCTGTATCCAGCCACCAAG+TGG 0.593579 4_2:+21091551 Msa0594050:three_prime_UTR
CCTCCTGCCGAAGGACGGGA+AGG 0.593899 4_2:+21087321 Msa0594050:three_prime_UTR
ATGACGAGGGTGTCTTGTTG+TGG 0.595378 4_2:-21091507 None:intergenic
CAGACATTACACGTGCATGT+AGG 0.595381 4_2:-21091590 None:intergenic
ACACTTGGCTTAACTTCTGG+AGG 0.596735 4_2:-21088992 None:intergenic
TTATGAAAGGGATTTGGCAA+AGG 0.597001 4_2:-21087144 None:intergenic
CCCTCAGGTTGAGAGATAGG+AGG 0.598922 4_2:-21087771 None:intergenic
GCTTCCAAATTCTCCAACAG+AGG 0.599653 4_2:-21086998 None:intergenic
ACAGTCCTGAAGAGAATAGT+GGG 0.601508 4_2:+21092097 Msa0594050:three_prime_UTR
TTCACATCTTGGATACGCAA+AGG 0.602051 4_2:-21087798 None:intergenic
TCCCAATGAATTGAATCCAA+GGG 0.602257 4_2:+21089902 Msa0594050:three_prime_UTR
TGGCTGGATACAGACAATAC+AGG 0.604446 4_2:-21091543 None:intergenic
TGGTTCGGAGAATGAAGCAA+GGG 0.604933 4_2:+21091769 Msa0594050:three_prime_UTR
GAGGTTGCTTATTGATAGCG+AGG 0.605174 4_2:+21088916 Msa0594050:three_prime_UTR
GAACCATTGGGCATATTAGA+CGG 0.606117 4_2:-21088635 None:intergenic
CATCTTGGATACGCAAAGGA+AGG 0.606572 4_2:-21087794 None:intergenic
CTCTTCTTTCCAAACACAGG+AGG 0.606920 4_2:-21089499 None:intergenic
ACTAAGCATCTTTCAAAGAG+TGG 0.607224 4_2:-21087570 None:intergenic
CCATCCAAATCAACATTGTG+AGG 0.607409 4_2:-21086943 None:intergenic
TGGCTAACCAATTAAATGTG+AGG 0.608102 4_2:+21086866 Msa0594050:three_prime_UTR
TGAAGAAGCAAATCTCCCGT+TGG 0.612037 4_2:+21091924 Msa0594050:three_prime_UTR
TTGGTTATGGAGATAGGCGG+CGG 0.612324 4_2:-21084094 None:intergenic
CTCCATACACGTCCACTTAG+GGG 0.615994 4_2:-21089762 None:intergenic
TTGCGTATCCAAGATGTGAA+AGG 0.616182 4_2:+21087801 Msa0594050:three_prime_UTR
TCCATACACGTCCACTTAGG+GGG 0.618210 4_2:-21089761 None:intergenic
AGAGTGTACTTCATGTGGCA+AGG 0.623087 4_2:+21086118 Msa0594050:three_prime_UTR
TTTGTTCCCTTTCATCAACA+AGG 0.624287 4_2:-21087170 None:intergenic
GAGCACCCAGGCCTATGACG+AGG 0.624956 4_2:-21091521 None:intergenic
CTTCCAAATTCTCCAACAGA+GGG 0.627135 4_2:-21086997 None:intergenic
ACAGACAACCAATGAGAGTG+AGG 0.631032 4_2:+21092023 Msa0594050:three_prime_UTR
TTCAAGTAACCAAGACCAAG+TGG 0.631930 4_2:+21091807 Msa0594050:three_prime_UTR
TTAGGTTGTACACCAGTGTG+AGG 0.632561 4_2:+21092338 Msa0594050:three_prime_UTR
TTGTACACCAGTGTGAGGCA+AGG 0.633191 4_2:+21092343 Msa0594050:three_prime_UTR
GTAAGCTATAAAATTACAGG+AGG 0.633774 4_2:+21092222 Msa0594050:three_prime_UTR
GCCGATCTATGTGATAAGTG+CGG 0.642160 4_2:+21084369 Msa0594050:three_prime_UTR
GACAAGCATCGGCAAGCCAG+AGG 0.642701 4_2:+21091387 Msa0594050:three_prime_UTR
CTAGACGCCAATAGAAGTGG+AGG 0.644014 4_2:-21087204 None:intergenic
CAGCTTGAAATACTTGACAC+TGG 0.646808 4_2:+21086264 Msa0594050:three_prime_UTR
GTAAAGCATCTTCTTGCCAG+TGG 0.647210 4_2:+21092373 Msa0594050:three_prime_UTR
TTGAAGCAACACATCCACAA+TGG 0.648024 4_2:-21086236 None:intergenic
GTAATTCTGGGCCAATATCG+CGG 0.648517 4_2:-21087356 None:intergenic
TATTTGTGGTACGATCTACT+GGG 0.648538 4_2:+21089524 Msa0594050:three_prime_UTR
TCTGTATCCAGCCACCAAGT+GGG 0.649632 4_2:+21091552 Msa0594050:three_prime_UTR
CCGCCACCGAATCGACGTAG+AGG 0.651077 4_2:-21084316 None:intergenic
ATGGTTCGGAGAATGAAGCA+AGG 0.651558 4_2:+21091768 Msa0594050:three_prime_UTR
GCCAAGTGTTGTCATGATCG+AGG 0.651574 4_2:+21089006 Msa0594050:three_prime_UTR
AGTTGCATAGACTGAATACA+GGG 0.651610 4_2:-21087898 None:intergenic
CAAGTGGCTGATGCTTGCAA+GGG 0.654005 4_2:+21091823 Msa0594050:three_prime_UTR
TCTTTCAAAGAGTGGCACAA+TGG 0.656778 4_2:-21087562 None:intergenic
ACTGGAGCTGAAACTTACTT+GGG 0.656896 4_2:+21088943 Msa0594050:three_prime_UTR
TTTCCCAGATACGTATAGCA+AGG 0.657040 4_2:+21087298 Msa0594050:three_prime_UTR
AACTGGAGTTAAATGTCGAG+AGG 0.658373 4_2:-21091744 None:intergenic
CTTAGAAGGAAACACAGGCA+TGG 0.658844 4_2:+21087275 Msa0594050:three_prime_UTR
CCAGGCTTAGAAGGAAACAC+AGG 0.660663 4_2:+21087270 Msa0594050:three_prime_UTR
GCTAACCAATTAAATGTGAG+GGG 0.663001 4_2:+21086868 Msa0594050:three_prime_UTR
ACCACAGGATAAGTGAGCAG+TGG 0.664291 4_2:+21089684 Msa0594050:intron
GAACCTCTACGTCGATTCGG+TGG 0.665625 4_2:+21084313 Msa0594050:CDS
CTGAGGGGAAACTTATAATG+GGG 0.667153 4_2:+21088500 Msa0594050:three_prime_UTR
TCAGCAATCATGGAGGACCA+AGG 0.667770 4_2:+21091700 Msa0594050:three_prime_UTR
TCTGCATGACAGTTAAACGC+CGG 0.670607 4_2:+21091609 Msa0594050:three_prime_UTR
TTTAGCCGTATGGACCCTGA+GGG 0.672269 4_2:+21088484 Msa0594050:three_prime_UTR
AAAGGGATTTGGCAAAGGAG+CGG 0.674141 4_2:-21087139 None:intergenic
TGGAGAGAGAGTTTGAACGG+AGG 0.676398 4_2:-21084016 None:intergenic
TTTGCATTTGTGTTGCAGCG+TGG 0.677898 4_2:-21084036 None:intergenic
CAGACAACCAATGAGAGTGA+GGG 0.686644 4_2:+21092024 Msa0594050:three_prime_UTR
GGTTCGGAGAATGAAGCAAG+GGG 0.686782 4_2:+21091770 Msa0594050:three_prime_UTR
ATTTAGCCGTATGGACCCTG+AGG 0.687200 4_2:+21088483 Msa0594050:three_prime_UTR
CAGTTGGTTATGGAGATAGG+CGG 0.694158 4_2:-21084097 None:intergenic
TGATGCTTTAGCAAATGCTG+CGG 0.695273 4_2:+21091439 Msa0594050:three_prime_UTR
TTGCATAGACTGAATACAGG+GGG 0.707100 4_2:-21087896 None:intergenic
TGGAGAGAGTGTACTTCATG+TGG 0.711681 4_2:+21086113 Msa0594050:three_prime_UTR
CAGACAATACAGGAGCACCC+AGG 0.725333 4_2:-21091533 None:intergenic
CTTGAAATACTTGACACTGG+TGG 0.733966 4_2:+21086267 Msa0594050:three_prime_UTR
TTAGCCGTATGGACCCTGAG+GGG 0.752430 4_2:+21088485 Msa0594050:three_prime_UTR
GTTGCATAGACTGAATACAG+GGG 0.770443 4_2:-21087897 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTAAATTTTAATTT+TGG + chr4_2:21090171-21090190 Msa0594050:intron 0.0%
!!! TTTTTTGTTAATTTGAATTT+GGG + chr4_2:21084608-21084627 Msa0594050:intron 10.0%
!! TCAAAAATAAAATAAAATTG+AGG + chr4_2:21084645-21084664 Msa0594050:intron 10.0%
!!! TTTTTTATTTTTTGAAAACT+CGG - chr4_2:21085258-21085277 None:intergenic 10.0%
!!! GAATTTATGATTTTTTTTTT+TGG + chr4_2:21086444-21086463 Msa0594050:intron 10.0%
!! TTCTTTAAATTGTTAATTAT+AGG + chr4_2:21087429-21087448 Msa0594050:intron 10.0%
!! AGAAAAAAAATATTATATAG+AGG - chr4_2:21088164-21088183 None:intergenic 10.0%
!!! AAAATTTAGTTCAATATTTT+TGG - chr4_2:21088278-21088297 None:intergenic 10.0%
!!! TTATTTGATACATTTTTTTT+TGG + chr4_2:21088389-21088408 Msa0594050:intron 10.0%
!! TAAAATTTAAATAAAAGACT+GGG - chr4_2:21090167-21090186 None:intergenic 10.0%
!! TTAAAATTTAAATAAAAGAC+TGG - chr4_2:21090168-21090187 None:intergenic 10.0%
!!! TTATTTTACAGATTTTTTTT+AGG + chr4_2:21092462-21092481 Msa0594050:three_prime_UTR 10.0%
!!! GTTTTTTGTTAATTTGAATT+TGG + chr4_2:21084607-21084626 Msa0594050:intron 15.0%
!!! TTTTTGTTAATTTGAATTTG+GGG + chr4_2:21084609-21084628 Msa0594050:intron 15.0%
!!! ATAGTTTAAAACGTTATTTT+TGG + chr4_2:21084875-21084894 Msa0594050:intron 15.0%
!!! TATCAGCAATAATTATATTT+TGG - chr4_2:21084973-21084992 None:intergenic 15.0%
!!! GAGTTTTCAAAAAATAAAAA+AGG + chr4_2:21085257-21085276 Msa0594050:intron 15.0%
!!! CATATAATTATTTTTTTAGG+TGG - chr4_2:21085431-21085450 None:intergenic 15.0%
!! CACCTAAAAAAATAATTATA+TGG + chr4_2:21085429-21085448 Msa0594050:intron 15.0%
!! AAATCATATATATAACAAAC+AGG - chr4_2:21085455-21085474 None:intergenic 15.0%
!!! ATATATATGATTTTGAAGTT+TGG + chr4_2:21085462-21085481 Msa0594050:intron 15.0%
!!! ATTTTTTACTTATTTGAAGT+TGG + chr4_2:21085975-21085994 Msa0594050:intron 15.0%
!!! TTTTTTACTTATTTGAAGTT+GGG + chr4_2:21085976-21085995 Msa0594050:intron 15.0%
!!! ATTTCAATAGTCTTTTAATT+TGG + chr4_2:21089650-21089669 Msa0594050:intron 15.0%
!! AAAATTTAAATAAAAGACTG+GGG - chr4_2:21090166-21090185 None:intergenic 15.0%
!!! TTTTTTGTATCTCTTTAAAA+GGG + chr4_2:21090363-21090382 Msa0594050:intron 15.0%
!! TTTAGTTATATGTTTGAATT+AGG + chr4_2:21090431-21090450 Msa0594050:intron 15.0%
!!! ATAAATTTTTCAACAATAGA+TGG - chr4_2:21090559-21090578 None:intergenic 15.0%
!!! TTTAAAATTATTCAATGCAA+CGG - chr4_2:21090907-21090926 None:intergenic 15.0%
!! AATTATCAAACAAATTAACA+TGG + chr4_2:21091047-21091066 Msa0594050:intron 15.0%
!!! TGATTTGATTTGAAATTGTA+CGG + chr4_2:21084455-21084474 Msa0594050:intron 20.0%
!!! TGTTTGTTAAATTGAATTTG+AGG + chr4_2:21084548-21084567 Msa0594050:intron 20.0%
!! AAATAAAATGTATGTAGTTG+CGG + chr4_2:21084825-21084844 Msa0594050:intron 20.0%
!!! CAATTTCTTTTTCCATTTTT+TGG - chr4_2:21085018-21085037 None:intergenic 20.0%
!! AAAAAAGCTGGATAATTATA+TGG + chr4_2:21085399-21085418 Msa0594050:intron 20.0%
!!! GGCCATATAATTATTTTTTT+AGG - chr4_2:21085434-21085453 None:intergenic 20.0%
!! ATTTACATCTATACTAATCA+TGG - chr4_2:21085955-21085974 None:intergenic 20.0%
!! CATTAAAATACAAAAGTTGT+GGG - chr4_2:21086170-21086189 None:intergenic 20.0%
!! TCATTAAAATACAAAAGTTG+TGG - chr4_2:21086171-21086190 None:intergenic 20.0%
!!! TTTTGTATTTTAATGAGCTA+TGG + chr4_2:21086175-21086194 Msa0594050:intron 20.0%
!! GGTTATTTATATATGTAACA+AGG - chr4_2:21086350-21086369 None:intergenic 20.0%
!! AAATAGATGAAATATCGTTT+CGG + chr4_2:21086391-21086410 Msa0594050:intron 20.0%
!! AAATCATAAATTCTGATCTT+GGG - chr4_2:21086437-21086456 None:intergenic 20.0%
!! AAAATCATAAATTCTGATCT+TGG - chr4_2:21086438-21086457 None:intergenic 20.0%
!!! ATCTTGTTTCATTATGTAAT+TGG + chr4_2:21086523-21086542 Msa0594050:intron 20.0%
!!! ATACAAAATAACCCAATTTT+GGG - chr4_2:21086712-21086731 None:intergenic 20.0%
!!! AATACAAAATAACCCAATTT+TGG - chr4_2:21086713-21086732 None:intergenic 20.0%
!! TAAAGAACTAATTACAAAGT+TGG - chr4_2:21087416-21087435 None:intergenic 20.0%
!! AATATATGGGTAAATACAAA+AGG - chr4_2:21087675-21087694 None:intergenic 20.0%
!!! ATTTTTTCAGTTCTAAGAAA+TGG - chr4_2:21087728-21087747 None:intergenic 20.0%
!! TTCTTAGAACTGAAAAAATA+TGG + chr4_2:21087729-21087748 Msa0594050:intron 20.0%
!!! ACTAAATTTTCTTGTGTTTT+TGG + chr4_2:21088288-21088307 Msa0594050:intron 20.0%
!!! CTAAATTTTCTTGTGTTTTT+GGG + chr4_2:21088289-21088308 Msa0594050:intron 20.0%
!!! TAAATTTTCTTGTGTTTTTG+GGG + chr4_2:21088290-21088309 Msa0594050:intron 20.0%
!! TATTAAATTACCTATTAAGC+AGG + chr4_2:21088604-21088623 Msa0594050:intron 20.0%
!! AAAATATAAGTTCTATGACA+TGG + chr4_2:21089267-21089286 Msa0594050:intron 20.0%
!!! TGCATCTTTTATATTTTCTA+TGG + chr4_2:21089579-21089598 Msa0594050:intron 20.0%
!! CAATAAATACTACTAGTAAA+TGG + chr4_2:21090016-21090035 Msa0594050:intron 20.0%
!!! TTTAGTAATAGATTTTCTCA+GGG + chr4_2:21090237-21090256 Msa0594050:intron 20.0%
!!! CTTTTAAAGAGATACAAAAA+AGG - chr4_2:21090364-21090383 None:intergenic 20.0%
!!! CTTTTTTGTATCTCTTTAAA+AGG + chr4_2:21090362-21090381 Msa0594050:intron 20.0%
!! AAAAAGTCAATTATTTCAAG+TGG - chr4_2:21090663-21090682 None:intergenic 20.0%
!! TTAAAATTATTCAATGCAAC+GGG - chr4_2:21090906-21090925 None:intergenic 20.0%
!! TAAACTACCATTGATATTAA+AGG - chr4_2:21091019-21091038 None:intergenic 20.0%
!! TATCAATATTAAGTAGATTC+AGG + chr4_2:21091071-21091090 Msa0594050:intron 20.0%
!! TTCAAAACATATAATTTGAG+AGG - chr4_2:21091209-21091228 None:intergenic 20.0%
!!! TGATGGATATAAATGTTTTA+GGG - chr4_2:21091341-21091360 None:intergenic 20.0%
!!! ATGATGGATATAAATGTTTT+AGG - chr4_2:21091342-21091361 None:intergenic 20.0%
!!! AACATTTATATCCATCATTT+TGG + chr4_2:21091344-21091363 Msa0594050:intron 20.0%
!! TTACTTGAATCTAATTCATT+TGG - chr4_2:21091796-21091815 None:intergenic 20.0%
!! TATAGCTATTATATGTATAG+TGG - chr4_2:21092300-21092319 None:intergenic 20.0%
!! ATGTATTAATATATTACCAC+TGG - chr4_2:21092392-21092411 None:intergenic 20.0%
!! GACAATTTCGATTTTGAATT+CGG + chr4_2:21084171-21084190 Msa0594050:intron 25.0%
!!! TGAGTTGATTCAAATTGTTA+GGG + chr4_2:21084203-21084222 Msa0594050:intron 25.0%
! GAATTGTTGTGAATTTATGA+AGG + chr4_2:21084236-21084255 Msa0594050:intron 25.0%
!! CAGTGGATATTTGAATTTTT+AGG + chr4_2:21084484-21084503 Msa0594050:intron 25.0%
! ATAACAACAAAACGACAAAA+CGG - chr4_2:21084749-21084768 None:intergenic 25.0%
!!! TGTTGTTGATTCTTTATAGT+TGG + chr4_2:21084768-21084787 Msa0594050:intron 25.0%
! TGATAAATACTAAGTAGCAT+AGG + chr4_2:21084988-21085007 Msa0594050:intron 25.0%
!!! ATTATTTTTTTAGGTGGAAC+AGG - chr4_2:21085425-21085444 None:intergenic 25.0%
! TTGGTATGTAAATTATTGAC+TGG + chr4_2:21086542-21086561 Msa0594050:intron 25.0%
! ATAGTTAGACTTCAAAAATG+AGG - chr4_2:21086684-21086703 None:intergenic 25.0%
! TAACTATATCTTCCCAAAAT+TGG + chr4_2:21086697-21086716 Msa0594050:intron 25.0%
! AACTATATCTTCCCAAAATT+GGG + chr4_2:21086698-21086717 Msa0594050:intron 25.0%
!! AAGTTATCATTGCCAATTTT+GGG - chr4_2:21086766-21086785 None:intergenic 25.0%
!! GGATGTTTCAATTTAGATTT+TGG + chr4_2:21087832-21087851 Msa0594050:three_prime_UTR 25.0%
! TACATCCTGCTATTATTATT+TGG - chr4_2:21087858-21087877 None:intergenic 25.0%
!!! AAATTGCCCATTTTAAGAAT+TGG + chr4_2:21087969-21087988 Msa0594050:intron 25.0%
! AAGGTTCCAATTCTTAAAAT+GGG - chr4_2:21087978-21087997 None:intergenic 25.0%
! AAACACATACAGAAAAAAGA+AGG - chr4_2:21087997-21088016 None:intergenic 25.0%
! GAGAATATACCTATATTAAG+TGG + chr4_2:21088692-21088711 Msa0594050:three_prime_UTR 25.0%
! AAGAAAAGAACTCGAAATAT+TGG + chr4_2:21088881-21088900 Msa0594050:three_prime_UTR 25.0%
! AGAAAAGAACTCGAAATATT+GGG + chr4_2:21088882-21088901 Msa0594050:three_prime_UTR 25.0%
!! TATAGTTTAACTTTGACGTA+TGG + chr4_2:21089446-21089465 Msa0594050:intron 25.0%
!! AAGGTCTTACTAAAAAGTTT+TGG - chr4_2:21089842-21089861 None:intergenic 25.0%
!!! AATCTTTTGAGAATGAACAA+TGG + chr4_2:21089933-21089952 Msa0594050:three_prime_UTR 25.0%
!!! TTCTGAGAGAATTTTTCAAT+TGG + chr4_2:21090080-21090099 Msa0594050:intron 25.0%
!! CTTTAGTAATAGATTTTCTC+AGG + chr4_2:21090236-21090255 Msa0594050:intron 25.0%
! AAATGTGTAAATTAGATGAG+AGG - chr4_2:21090414-21090433 None:intergenic 25.0%
! TAATGCATTACAATATCTCT+AGG - chr4_2:21090948-21090967 None:intergenic 25.0%
! AAATGTTAAAGTGAACACAT+TGG - chr4_2:21090972-21090991 None:intergenic 25.0%
! AATATTAAGTAGATTCAGGA+CGG + chr4_2:21091075-21091094 Msa0594050:intron 25.0%
!!! AACAAAGTTTGTTTTAACCA+CGG + chr4_2:21091166-21091185 Msa0594050:intron 25.0%
! TGAATTCTATTCCAAAATGA+TGG - chr4_2:21091358-21091377 None:intergenic 25.0%
!! TTCAAGAAAGTGAATTGTTT+TGG - chr4_2:21092134-21092153 None:intergenic 25.0%
! AAAAGGGAAAAAATGAAGAT+TGG - chr4_2:21092163-21092182 None:intergenic 25.0%
!!! GACTTTAGAGTAATGTAAAA+GGG - chr4_2:21092179-21092198 None:intergenic 25.0%
!!! TGACTTTAGAGTAATGTAAA+AGG - chr4_2:21092180-21092199 None:intergenic 25.0%
GATGATTATACTTCAAGACT+TGG - chr4_2:21083826-21083845 None:intergenic 30.0%
!! GATTTTGAATTCGGTGAATT+TGG + chr4_2:21084180-21084199 Msa0594050:intron 30.0%
!! GTGAGTTGATTCAAATTGTT+AGG + chr4_2:21084202-21084221 Msa0594050:intron 30.0%
TTGTGAATTTATGAAGGTTG+TGG + chr4_2:21084242-21084261 Msa0594050:intron 30.0%
TGTGGAATTGAAGTTGAAAA+TGG + chr4_2:21084260-21084279 Msa0594050:CDS 30.0%
TAACAACAAAACGACAAAAC+GGG - chr4_2:21084748-21084767 None:intergenic 30.0%
AGCATAGGATTTCCAAAAAA+TGG + chr4_2:21085003-21085022 Msa0594050:intron 30.0%
TATGTCTACATCAAAAAAGC+TGG + chr4_2:21085387-21085406 Msa0594050:intron 30.0%
CTGCAGATAATAGAACAAAT+AGG - chr4_2:21086211-21086230 None:intergenic 30.0%
TATTTCATCTATTTCCAGAG+AGG - chr4_2:21086385-21086404 None:intergenic 30.0%
AATGTATGATGATAGATAGC+AGG + chr4_2:21086473-21086492 Msa0594050:intron 30.0%
!!! GTTGTTGCTTTTTGCTTATA+TGG + chr4_2:21086642-21086661 Msa0594050:intron 30.0%
! CAAGTTATCATTGCCAATTT+TGG - chr4_2:21086767-21086786 None:intergenic 30.0%
AATGAAAAGCCTAATGAATC+TGG + chr4_2:21086800-21086819 Msa0594050:three_prime_UTR 30.0%
GGAATTATGCAGAAAATGAT+GGG + chr4_2:21086902-21086921 Msa0594050:three_prime_UTR 30.0%
GCAAGATATATATGAATCAC+TGG + chr4_2:21087089-21087108 Msa0594050:three_prime_UTR 30.0%
TCAACAAGGACATTATGAAA+GGG - chr4_2:21087159-21087178 None:intergenic 30.0%
ATCAACAAGGACATTATGAA+AGG - chr4_2:21087160-21087179 None:intergenic 30.0%
! ATAATGTCCTTGTTGATGAA+AGG + chr4_2:21087163-21087182 Msa0594050:three_prime_UTR 30.0%
! TAATGTCCTTGTTGATGAAA+GGG + chr4_2:21087164-21087183 Msa0594050:three_prime_UTR 30.0%
AACTCTTGATCTGTAATTCT+GGG - chr4_2:21087371-21087390 None:intergenic 30.0%
CATTTCCTTACCATGATTTA+TGG + chr4_2:21087521-21087540 Msa0594050:intron 30.0%
CATAACCATAAATCATGGTA+AGG - chr4_2:21087529-21087548 None:intergenic 30.0%
GTGAACATAACCATAAATCA+TGG - chr4_2:21087534-21087553 None:intergenic 30.0%
! ATTCTTTTCCTTTCACATCT+TGG - chr4_2:21087812-21087831 None:intergenic 30.0%
AAGATGTGAAAGGAAAAGAA+TGG + chr4_2:21087811-21087830 Msa0594050:three_prime_UTR 30.0%
TTTGGCCAAATAATAATAGC+AGG + chr4_2:21087850-21087869 Msa0594050:three_prime_UTR 30.0%
GAAGGTTCCAATTCTTAAAA+TGG - chr4_2:21087979-21087998 None:intergenic 30.0%
GCTGCAATATAAGCTAAATT+TGG + chr4_2:21088021-21088040 Msa0594050:intron 30.0%
!! GTTTGCTATATGAGCTAAAA+TGG - chr4_2:21088566-21088585 None:intergenic 30.0%
ATTCTCATAAACACCAGAAT+AGG - chr4_2:21088678-21088697 None:intergenic 30.0%
CCAGAATAACCACTTAATAT+AGG - chr4_2:21088704-21088723 None:intergenic 30.0%
CCTATATTAAGTGGTTATTC+TGG + chr4_2:21088701-21088720 Msa0594050:three_prime_UTR 30.0%
ATATTGGGTCAAAAAGTAAG+AGG + chr4_2:21088897-21088916 Msa0594050:three_prime_UTR 30.0%
TTCTGATATTTAGATTCACC+AGG - chr4_2:21089246-21089265 None:intergenic 30.0%
AAAATTTGCAACTCCAATAC+TGG - chr4_2:21089331-21089350 None:intergenic 30.0%
GAACTTACTTCTATTCATTC+AGG + chr4_2:21089474-21089493 Msa0594050:intron 30.0%
! TGGAAAGAAGAGTATATTTG+TGG + chr4_2:21089510-21089529 Msa0594050:three_prime_UTR 30.0%
TTTCAATTGGCAGTAACAAA+TGG + chr4_2:21090093-21090112 Msa0594050:intron 30.0%
! TTTTGCAATATGTCTGCTTA+TGG + chr4_2:21090116-21090135 Msa0594050:intron 30.0%
TTTGCAATATGTCTGCTTAT+GGG + chr4_2:21090117-21090136 Msa0594050:intron 30.0%
CATCTGATCCAAATTTAAGA+GGG - chr4_2:21090294-21090313 None:intergenic 30.0%
TAAGACTGTTAGTATGTACT+AGG - chr4_2:21090617-21090636 None:intergenic 30.0%
! AAGTCAATTATTTCAAGTGG+AGG - chr4_2:21090660-21090679 None:intergenic 30.0%
TAACAAAAGCAACAACGATA+TGG - chr4_2:21090723-21090742 None:intergenic 30.0%
ATGGGTAAGTATATGAGAAT+CGG - chr4_2:21090819-21090838 None:intergenic 30.0%
AAAGGAGCAACTAAATCAAT+CGG - chr4_2:21091001-21091020 None:intergenic 30.0%
AGTTGCTCCTTTAATATCAA+TGG + chr4_2:21091009-21091028 Msa0594050:intron 30.0%
ATATTAAGTAGATTCAGGAC+GGG + chr4_2:21091076-21091095 Msa0594050:intron 30.0%
AACTGATCATTTCAAAACAC+GGG - chr4_2:21091142-21091161 None:intergenic 30.0%
CAACTGATCATTTCAAAACA+CGG - chr4_2:21091143-21091162 None:intergenic 30.0%
!!! ACAAAGTTTGTTTTAACCAC+GGG + chr4_2:21091167-21091186 Msa0594050:intron 30.0%
! ATATAATTTGAGAGGTACAC+AGG - chr4_2:21091201-21091220 None:intergenic 30.0%
TTGATCATGCAGCATAATTT+GGG - chr4_2:21091253-21091272 None:intergenic 30.0%
TGCGTAAGCTATAAAATTAC+AGG + chr4_2:21092219-21092238 Msa0594050:three_prime_UTR 30.0%
GTAAGCTATAAAATTACAGG+AGG + chr4_2:21092222-21092241 Msa0594050:three_prime_UTR 30.0%
! AAAATTACAGGAGGTTTGTT+TGG + chr4_2:21092231-21092250 Msa0594050:three_prime_UTR 30.0%
! AAATTACAGGAGGTTTGTTT+GGG + chr4_2:21092232-21092251 Msa0594050:three_prime_UTR 30.0%
AAAGAAGAGAAAGAAGAGAG+AGG - chr4_2:21083877-21083896 None:intergenic 35.0%
AATGGGAAGAAAGAAAGAGA+AGG - chr4_2:21083953-21083972 None:intergenic 35.0%
AGGAAATGAAAAACGGTTAC+CGG - chr4_2:21083982-21084001 None:intergenic 35.0%
GTTAGGGAGGAAATGAAAAA+CGG - chr4_2:21083989-21084008 None:intergenic 35.0%
CAAAATCGAAATTGTCGTAC+CGG - chr4_2:21084167-21084186 None:intergenic 35.0%
AAATTGTACGGATCAAACAG+TGG + chr4_2:21084467-21084486 Msa0594050:intron 35.0%
!! AACGGGTTAAGACAACAAAA+CGG - chr4_2:21084731-21084750 None:intergenic 35.0%
AAACGCCAGATATTGTTTGT+AGG + chr4_2:21085061-21085080 Msa0594050:intron 35.0%
TTAGGCCTACAAACAATATC+TGG - chr4_2:21085069-21085088 None:intergenic 35.0%
TAGATATTGTCTGTTGTGCT+AGG - chr4_2:21085283-21085302 None:intergenic 35.0%
! AGTTAGCTGAACATTTTCTG+TGG + chr4_2:21085302-21085321 Msa0594050:intron 35.0%
CTGAAAACTCACACTTAAAG+AGG - chr4_2:21085353-21085372 None:intergenic 35.0%
AGTTTGGAAAGAGCTTTCTT+TGG + chr4_2:21085478-21085497 Msa0594050:intron 35.0%
AGTCACTAGTCAGTAATTGT+AGG + chr4_2:21085786-21085805 Msa0594050:intron 35.0%
GTCACTAGTCAGTAATTGTA+GGG + chr4_2:21085787-21085806 Msa0594050:intron 35.0%
TCAGTAATTGTAGGGAATCT+CGG + chr4_2:21085795-21085814 Msa0594050:intron 35.0%
CAAGCTCAGAGTGAAAATAT+AGG + chr4_2:21085855-21085874 Msa0594050:intron 35.0%
!! TAGAGCATGAAGCTATTTCT+TGG - chr4_2:21086006-21086025 None:intergenic 35.0%
ATGTTCCATGCAAAAGAATC+TGG + chr4_2:21086089-21086108 Msa0594050:three_prime_UTR 35.0%
AAGTTGTGGGTAAAGAAAAG+TGG - chr4_2:21086157-21086176 None:intergenic 35.0%
CCAGAGAGGTAAATCATAAA+TGG - chr4_2:21086371-21086390 None:intergenic 35.0%
CCATTTATGATTTACCTCTC+TGG + chr4_2:21086368-21086387 Msa0594050:intron 35.0%
CAATCGTGCTTTCCATATAT+AGG + chr4_2:21086617-21086636 Msa0594050:intron 35.0%
AAGCAACAACCTCCTATATA+TGG - chr4_2:21086632-21086651 None:intergenic 35.0%
TAACTGTATCCTCCCAAAAT+TGG + chr4_2:21086751-21086770 Msa0594050:intron 35.0%
! TTATCATTGCCAATTTTGGG+AGG - chr4_2:21086763-21086782 None:intergenic 35.0%
!! TTTGCTGTTCCAGATTCATT+AGG - chr4_2:21086812-21086831 None:intergenic 35.0%
TGGCTAACCAATTAAATGTG+AGG + chr4_2:21086866-21086885 Msa0594050:three_prime_UTR 35.0%
GGCTAACCAATTAAATGTGA+GGG + chr4_2:21086867-21086886 Msa0594050:three_prime_UTR 35.0%
GCTAACCAATTAAATGTGAG+GGG + chr4_2:21086868-21086887 Msa0594050:three_prime_UTR 35.0%
GGGAATTATGCAGAAAATGA+TGG + chr4_2:21086901-21086920 Msa0594050:three_prime_UTR 35.0%
! CAAACCTCACAATGTTGATT+TGG + chr4_2:21086939-21086958 Msa0594050:three_prime_UTR 35.0%
! TCTGGTTTGATTTCTCTAGA+AGG - chr4_2:21086970-21086989 None:intergenic 35.0%
CAATTTCATCGTGAGTCAAA+TGG + chr4_2:21087033-21087052 Msa0594050:three_prime_UTR 35.0%
TTATGAAAGGGATTTGGCAA+AGG - chr4_2:21087147-21087166 None:intergenic 35.0%
AGGACATTATGAAAGGGATT+TGG - chr4_2:21087153-21087172 None:intergenic 35.0%
TTTGTTCCCTTTCATCAACA+AGG - chr4_2:21087173-21087192 None:intergenic 35.0%
! ATCTTTTACCTAAACCTCCT+AGG + chr4_2:21087235-21087254 Msa0594050:three_prime_UTR 35.0%
CAACTCTTGATCTGTAATTC+TGG - chr4_2:21087372-21087391 None:intergenic 35.0%
TCAAGAGTTGCAGCAAATAT+CGG + chr4_2:21087382-21087401 Msa0594050:three_prime_UTR 35.0%
ACTAAGCATCTTTCAAAGAG+TGG - chr4_2:21087573-21087592 None:intergenic 35.0%
! ATTACTTCAGCACATGCTTT+TGG - chr4_2:21087632-21087651 None:intergenic 35.0%
GAAAAAATATGGCATTGTGC+AGG + chr4_2:21087740-21087759 Msa0594050:intron 35.0%
!!! CAGGATGTATGTTTTAGAGA+GGG + chr4_2:21087869-21087888 Msa0594050:three_prime_UTR 35.0%
!!! AGGATGTATGTTTTAGAGAG+GGG + chr4_2:21087870-21087889 Msa0594050:three_prime_UTR 35.0%
AGTTGCATAGACTGAATACA+GGG - chr4_2:21087901-21087920 None:intergenic 35.0%
! ATTTGTTAGCATATTGAGCC+AGG - chr4_2:21088112-21088131 None:intergenic 35.0%
!!! TTTTCTTGTGTTTTTGGGGA+TGG + chr4_2:21088294-21088313 Msa0594050:intron 35.0%
!!! TTTCTTGTGTTTTTGGGGAT+GGG + chr4_2:21088295-21088314 Msa0594050:intron 35.0%
AACAAATTCTGCTTCAGTAC+AGG + chr4_2:21088534-21088553 Msa0594050:three_prime_UTR 35.0%
GGAAAAGTTTCCTGCTTAAT+AGG - chr4_2:21088617-21088636 None:intergenic 35.0%
TCACTTGAATGAGAACCATT+GGG - chr4_2:21088650-21088669 None:intergenic 35.0%
TTCACTTGAATGAGAACCAT+TGG - chr4_2:21088651-21088670 None:intergenic 35.0%
TCAAGTGAAACTTCCTATTC+TGG + chr4_2:21088662-21088681 Msa0594050:three_prime_UTR 35.0%
!!! TTTCGAGTTCTTTTCTTCTC+AGG - chr4_2:21088878-21088897 None:intergenic 35.0%
ATACTCTTCTTTCCAAACAC+AGG - chr4_2:21089505-21089524 None:intergenic 35.0%
ATATTTGTGGTACGATCTAC+TGG + chr4_2:21089523-21089542 Msa0594050:three_prime_UTR 35.0%
TATTTGTGGTACGATCTACT+GGG + chr4_2:21089524-21089543 Msa0594050:three_prime_UTR 35.0%
AGTGTGATAGTTGCCAAAAA+TGG + chr4_2:21089711-21089730 Msa0594050:three_prime_UTR 35.0%
TCCCAATGAATTGAATCCAA+GGG + chr4_2:21089902-21089921 Msa0594050:three_prime_UTR 35.0%
TCCCTTGGATTCAATTCATT+GGG - chr4_2:21089906-21089925 None:intergenic 35.0%
TTCCCTTGGATTCAATTCAT+TGG - chr4_2:21089907-21089926 None:intergenic 35.0%
AAAAGATTATCCAGTTCCCT+TGG - chr4_2:21089921-21089940 None:intergenic 35.0%
! GTAACTATAAAAGCATAGCG+TGG - chr4_2:21089989-21090008 None:intergenic 35.0%
GTTGACATTACACTAAAGCT+AGG + chr4_2:21090054-21090073 Msa0594050:intron 35.0%
GCATCTGATCCAAATTTAAG+AGG - chr4_2:21090295-21090314 None:intergenic 35.0%
CAGAAAGTAAACATATGCAC+AGG + chr4_2:21090488-21090507 Msa0594050:intron 35.0%
AAGTAAACATATGCACAGGA+TGG + chr4_2:21090492-21090511 Msa0594050:intron 35.0%
CCATCACATTCTTGTCATAT+TGG - chr4_2:21090690-21090709 None:intergenic 35.0%
CCAATATGACAAGAATGTGA+TGG + chr4_2:21090687-21090706 Msa0594050:intron 35.0%
TGGGTAAGTATATGAGAATC+GGG - chr4_2:21090818-21090837 None:intergenic 35.0%
TCATTTCAAAACACGGGTAT+GGG - chr4_2:21091136-21091155 None:intergenic 35.0%
ATCATTTCAAAACACGGGTA+TGG - chr4_2:21091137-21091156 None:intergenic 35.0%
!!! CGTGTTTTGAAATGATCAGT+TGG + chr4_2:21091141-21091160 Msa0594050:intron 35.0%
CTTGATCATGCAGCATAATT+TGG - chr4_2:21091254-21091273 None:intergenic 35.0%
CAAATTATGCTGCATGATCA+AGG + chr4_2:21091252-21091271 Msa0594050:intron 35.0%
CAAGAAACAAAGACAAGCAT+CGG + chr4_2:21091376-21091395 Msa0594050:three_prime_UTR 35.0%
! CTTTTTCTTTCGCATCATCA+GGG - chr4_2:21091642-21091661 None:intergenic 35.0%
CTCAGAAAAATCAGCAATCA+TGG + chr4_2:21091690-21091709 Msa0594050:three_prime_UTR 35.0%
AGAAAAATCAGCAATCATGG+AGG + chr4_2:21091693-21091712 Msa0594050:three_prime_UTR 35.0%
!! TTTAACTCCAGTTGATGGTT+CGG + chr4_2:21091754-21091773 Msa0594050:three_prime_UTR 35.0%
ATTAGACTTGAATTGCCAAC+CGG + chr4_2:21091849-21091868 Msa0594050:three_prime_UTR 35.0%
! TAGAAAGACCATTTTGCTTC+AGG - chr4_2:21091957-21091976 None:intergenic 35.0%
AAATTCAGCTTCAAATGTGC+AGG + chr4_2:21091999-21092018 Msa0594050:three_prime_UTR 35.0%
TAGTGGAAAAATTCGCAGTT+AGG - chr4_2:21092283-21092302 None:intergenic 35.0%
! AATGCTGAAGCTTGTGTTTT+AGG + chr4_2:21092320-21092339 Msa0594050:three_prime_UTR 35.0%
GAAGAAAGAAAGAGAAGGTG+AGG - chr4_2:21083948-21083967 None:intergenic 40.0%
! CTTTCTTCCCATTTTCTCTC+CGG + chr4_2:21083960-21083979 Msa0594050:five_prime_UTR 40.0%
TCACAGTTGGTTATGGAGAT+AGG - chr4_2:21084103-21084122 None:intergenic 40.0%
TAACGTCACCAGAAGTTTGA+GGG - chr4_2:21084135-21084154 None:intergenic 40.0%
TGTTGCATGAACGTTGTTTG+TGG + chr4_2:21084291-21084310 Msa0594050:CDS 40.0%
AAAGGTTGGATTCTTCGATC+CGG + chr4_2:21084339-21084358 Msa0594050:CDS 40.0%
ACATAGATCGGCAAATTCAC+CGG - chr4_2:21084361-21084380 None:intergenic 40.0%
ATGTATGTAGTTGCGGTTGT+TGG + chr4_2:21084832-21084851 Msa0594050:intron 40.0%
!!! CATAGGAGTGTGCTTTTTCA+AGG + chr4_2:21085119-21085138 Msa0594050:intron 40.0%
ATTGTCCATAAGCAAAGCTC+TGG - chr4_2:21085191-21085210 None:intergenic 40.0%
AGAGCTTTGCTTATGGACAA+TGG + chr4_2:21085190-21085209 Msa0594050:intron 40.0%
GAGCTTTGCTTATGGACAAT+GGG + chr4_2:21085191-21085210 Msa0594050:intron 40.0%
TATGGACAATGGGATTCGAT+TGG + chr4_2:21085201-21085220 Msa0594050:intron 40.0%
ATGAACCGTCAGATCATGAT+CGG - chr4_2:21085675-21085694 None:intergenic 40.0%
TCATGCTCTAACTCTTACTC+TGG + chr4_2:21086016-21086035 Msa0594050:intron 40.0%
TCCATGCAAAAGAATCTGGT+TGG + chr4_2:21086093-21086112 Msa0594050:three_prime_UTR 40.0%
! TCCAACCAGATTCTTTTGCA+TGG - chr4_2:21086097-21086116 None:intergenic 40.0%
TTGAAGCAACACATCCACAA+TGG - chr4_2:21086239-21086258 None:intergenic 40.0%
CAGCTTGAAATACTTGACAC+TGG + chr4_2:21086264-21086283 Msa0594050:three_prime_UTR 40.0%
CTTGAAATACTTGACACTGG+TGG + chr4_2:21086267-21086286 Msa0594050:three_prime_UTR 40.0%
ATTACCTGTGCAAGTACTTC+AGG + chr4_2:21086300-21086319 Msa0594050:three_prime_UTR 40.0%
TCGTGCTTTCCATATATAGG+AGG + chr4_2:21086620-21086639 Msa0594050:intron 40.0%
GCATACCCCTCACATTTAAT+TGG - chr4_2:21086876-21086895 None:intergenic 40.0%
! ATGCAGAAAATGATGGGATG+AGG + chr4_2:21086908-21086927 Msa0594050:three_prime_UTR 40.0%
! AAAATGATGGGATGAGGTAC+TGG + chr4_2:21086914-21086933 Msa0594050:three_prime_UTR 40.0%
CCATCCAAATCAACATTGTG+AGG - chr4_2:21086946-21086965 None:intergenic 40.0%
!! CCTCACAATGTTGATTTGGA+TGG + chr4_2:21086943-21086962 Msa0594050:three_prime_UTR 40.0%
TTACCCTCTGTTGGAGAATT+TGG + chr4_2:21086994-21087013 Msa0594050:three_prime_UTR 40.0%
CTTCCAAATTCTCCAACAGA+GGG - chr4_2:21087000-21087019 None:intergenic 40.0%
GTGAGTCAAATGGTTCATCT+AGG + chr4_2:21087043-21087062 Msa0594050:three_prime_UTR 40.0%
! TCAAATGGTTCATCTAGGAC+TGG + chr4_2:21087048-21087067 Msa0594050:three_prime_UTR 40.0%
AATGTCACCTCCACTTCTAT+TGG + chr4_2:21087197-21087216 Msa0594050:three_prime_UTR 40.0%
TTTCCCAGATACGTATAGCA+AGG + chr4_2:21087298-21087317 Msa0594050:three_prime_UTR 40.0%
CAAGAGTTGCAGCAAATATC+GGG + chr4_2:21087383-21087402 Msa0594050:three_prime_UTR 40.0%
TCTTTCAAAGAGTGGCACAA+TGG - chr4_2:21087565-21087584 None:intergenic 40.0%
TTCACATCTTGGATACGCAA+AGG - chr4_2:21087801-21087820 None:intergenic 40.0%
TTGCGTATCCAAGATGTGAA+AGG + chr4_2:21087801-21087820 Msa0594050:three_prime_UTR 40.0%
!!! GCAGGATGTATGTTTTAGAG+AGG + chr4_2:21087868-21087887 Msa0594050:three_prime_UTR 40.0%
TTGCATAGACTGAATACAGG+GGG - chr4_2:21087899-21087918 None:intergenic 40.0%
GTTGCATAGACTGAATACAG+GGG - chr4_2:21087900-21087919 None:intergenic 40.0%
CAGTTGCATAGACTGAATAC+AGG - chr4_2:21087902-21087921 None:intergenic 40.0%
TCAGAATCTTTGCAAGTTCC+TGG + chr4_2:21088091-21088110 Msa0594050:intron 40.0%
TGCAGTAACATTTAGCCGTA+TGG + chr4_2:21088474-21088493 Msa0594050:intron 40.0%
CCATTATAAGTTTCCCCTCA+GGG - chr4_2:21088501-21088520 None:intergenic 40.0%
CCTGAGGGGAAACTTATAAT+GGG + chr4_2:21088499-21088518 Msa0594050:three_prime_UTR 40.0%
CTGAGGGGAAACTTATAATG+GGG + chr4_2:21088500-21088519 Msa0594050:three_prime_UTR 40.0%
! GGAAACTTATAATGGGGTTC+AGG + chr4_2:21088506-21088525 Msa0594050:three_prime_UTR 40.0%
! ACTTATAATGGGGTTCAGGA+AGG + chr4_2:21088510-21088529 Msa0594050:three_prime_UTR 40.0%
TTTCCGTCTAATATGCCCAA+TGG + chr4_2:21088632-21088651 Msa0594050:three_prime_UTR 40.0%
GAACCATTGGGCATATTAGA+CGG - chr4_2:21088638-21088657 None:intergenic 40.0%
!!! AACCCTTTTGAGACTGAAGA+AGG - chr4_2:21088727-21088746 None:intergenic 40.0%
! ACTTTCTAGAGAGCGCATTT+AGG - chr4_2:21088763-21088782 None:intergenic 40.0%
! TAAATGCGCTCTCTAGAAAG+TGG + chr4_2:21088762-21088781 Msa0594050:three_prime_UTR 40.0%
TCTAGAAAGTGGAACTCAGT+TGG + chr4_2:21088773-21088792 Msa0594050:three_prime_UTR 40.0%
ATGTAGAAATGCCTGAAAGC+AGG + chr4_2:21088816-21088835 Msa0594050:three_prime_UTR 40.0%
! ACATCTCTTTTCCTGCTTTC+AGG - chr4_2:21088830-21088849 None:intergenic 40.0%
ACTGGAGCTGAAACTTACTT+GGG + chr4_2:21088943-21088962 Msa0594050:three_prime_UTR 40.0%
ACAACACTTGGCTTAACTTC+TGG - chr4_2:21088998-21089017 None:intergenic 40.0%
TACATGCATGCATGATAGAG+AGG + chr4_2:21089110-21089129 Msa0594050:intron 40.0%
ACATGCATGCATGATAGAGA+GGG + chr4_2:21089111-21089130 Msa0594050:intron 40.0%
ATAGAGAGGGGCGAAAATTA+TGG + chr4_2:21089124-21089143 Msa0594050:intron 40.0%
! TATCCAAAGCTTTTCAGTCC+TGG + chr4_2:21089225-21089244 Msa0594050:intron 40.0%
AAGTTAATCACTGCTACGTG+TGG - chr4_2:21089384-21089403 None:intergenic 40.0%
TTGGAGTATGATTGTACCAC+AGG + chr4_2:21089669-21089688 Msa0594050:intron 40.0%
GTGATAGTTGCCAAAAATGG+CGG + chr4_2:21089714-21089733 Msa0594050:three_prime_UTR 40.0%
ATGTACTTATTCCCCCTAAG+TGG + chr4_2:21089750-21089769 Msa0594050:three_prime_UTR 40.0%
! GACGTGTATGGAGAACTTTT+GGG + chr4_2:21089772-21089791 Msa0594050:three_prime_UTR 40.0%
!!! AGAACTTTTGGGATCAAAGC+AGG + chr4_2:21089783-21089802 Msa0594050:three_prime_UTR 40.0%
CTCCCAATGAATTGAATCCA+AGG + chr4_2:21089901-21089920 Msa0594050:three_prime_UTR 40.0%
TGAATTGAATCCAAGGGAAC+TGG + chr4_2:21089908-21089927 Msa0594050:three_prime_UTR 40.0%
TGATAGATTGGGGTTCCAAA+TGG + chr4_2:21090264-21090283 Msa0594050:intron 40.0%
GATAGATTGGGGTTCCAAAT+GGG + chr4_2:21090265-21090284 Msa0594050:intron 40.0%
ATTTAAGAGGGAAGCCCATT+TGG - chr4_2:21090282-21090301 None:intergenic 40.0%
ATGGGCTTCCCTCTTAAATT+TGG + chr4_2:21090283-21090302 Msa0594050:intron 40.0%
! GAGAGGCTTTTGCATTATTC+AGG - chr4_2:21090397-21090416 None:intergenic 40.0%
GAATTTGTACACCAACCGTA+CGG - chr4_2:21090469-21090488 None:intergenic 40.0%
AATTCTCATCCCCTTGGTAT+GGG - chr4_2:21090849-21090868 None:intergenic 40.0%
AAATTCTCATCCCCTTGGTA+TGG - chr4_2:21090850-21090869 None:intergenic 40.0%
!!! GTTTGTTTTAACCACGGGTA+TGG + chr4_2:21091172-21091191 Msa0594050:intron 40.0%
! GCAGCATAATTTGGGATCAT+GGG - chr4_2:21091245-21091264 None:intergenic 40.0%
! TGCAGCATAATTTGGGATCA+TGG - chr4_2:21091246-21091265 None:intergenic 40.0%
TTATGCTGCATGATCAAGGA+TGG + chr4_2:21091256-21091275 Msa0594050:intron 40.0%
TGATGCTTTAGCAAATGCTG+CGG + chr4_2:21091439-21091458 Msa0594050:three_prime_UTR 40.0%
!!! GCATCATCAGGGTTTTAAAC+CGG - chr4_2:21091631-21091650 None:intergenic 40.0%
!! GCTTTTTCTTTCGCATCATC+AGG - chr4_2:21091643-21091662 None:intergenic 40.0%
GTCTACTTCTGATTCATCCT+TGG - chr4_2:21091720-21091739 None:intergenic 40.0%
AACTGGAGTTAAATGTCGAG+AGG - chr4_2:21091747-21091766 None:intergenic 40.0%
CGACATTTAACTCCAGTTGA+TGG + chr4_2:21091749-21091768 Msa0594050:three_prime_UTR 40.0%
TTCAAGTAACCAAGACCAAG+TGG + chr4_2:21091807-21091826 Msa0594050:three_prime_UTR 40.0%
GAGACATACCTGAAGCAAAA+TGG + chr4_2:21091946-21091965 Msa0594050:three_prime_UTR 40.0%
ACAGTCCTGAAGAGAATAGT+GGG + chr4_2:21092097-21092116 Msa0594050:three_prime_UTR 40.0%
GGGAAAAAATGAAGATTGGC+AGG - chr4_2:21092159-21092178 None:intergenic 40.0%
ACGGTTACCGGAGAGAAAAT+GGG - chr4_2:21083970-21083989 None:intergenic 45.0%
AACGGTTACCGGAGAGAAAA+TGG - chr4_2:21083971-21083990 None:intergenic 45.0%
GAACGGAGGAGAAGAAGTTA+GGG - chr4_2:21084005-21084024 None:intergenic 45.0%
TGAACGGAGGAGAAGAAGTT+AGG - chr4_2:21084006-21084025 None:intergenic 45.0%
TTTGCATTTGTGTTGCAGCG+TGG - chr4_2:21084039-21084058 None:intergenic 45.0%
CAGTTGGTTATGGAGATAGG+CGG - chr4_2:21084100-21084119 None:intergenic 45.0%
TCTCCATAACCAACTGTGAC+CGG + chr4_2:21084104-21084123 Msa0594050:CDS 45.0%
CAGAAGTTTGAGGGAAGTTC+CGG - chr4_2:21084126-21084145 None:intergenic 45.0%
CTAACGTCACCAGAAGTTTG+AGG - chr4_2:21084136-21084155 None:intergenic 45.0%
!! GGTGACGTTAGCTTTGATTC+CGG + chr4_2:21084145-21084164 Msa0594050:CDS 45.0%
GCCGATCTATGTGATAAGTG+CGG + chr4_2:21084369-21084388 Msa0594050:three_prime_UTR 45.0%
CCCGCACTTATCACATAGAT+CGG - chr4_2:21084373-21084392 None:intergenic 45.0%
CCGATCTATGTGATAAGTGC+GGG + chr4_2:21084370-21084389 Msa0594050:three_prime_UTR 45.0%
GGGTTAAGACAACAAAACGG+TGG - chr4_2:21084728-21084747 None:intergenic 45.0%
! TGCGGTTGTTGGTAAGATTG+TGG + chr4_2:21084843-21084862 Msa0594050:intron 45.0%
! TGTTGGTAAGATTGTGGCTG+CGG + chr4_2:21084849-21084868 Msa0594050:intron 45.0%
!! ACCACTAGCTCTGTTGAGTT+AGG - chr4_2:21085087-21085106 None:intergenic 45.0%
!! ATGGACTAGCCCATCGAAAT+TGG - chr4_2:21085168-21085187 None:intergenic 45.0%
TCCATCCAGAGCTTTGCTTA+TGG + chr4_2:21085183-21085202 Msa0594050:intron 45.0%
!! TCCATAAGCAAAGCTCTGGA+TGG - chr4_2:21085187-21085206 None:intergenic 45.0%
ATTGGACCCCTCAGATTAGT+CGG + chr4_2:21085219-21085238 Msa0594050:intron 45.0%
CTAAGACCGACTAATCTGAG+GGG - chr4_2:21085228-21085247 None:intergenic 45.0%
CCTAAGACCGACTAATCTGA+GGG - chr4_2:21085229-21085248 None:intergenic 45.0%
! TCAGATTAGTCGGTCTTAGG+CGG + chr4_2:21085229-21085248 Msa0594050:intron 45.0%
! ACATTTTCTGTGGTTACCCC+AGG + chr4_2:21085312-21085331 Msa0594050:intron 45.0%
ACACTTAAAGAGGAGATCCC+AGG - chr4_2:21085343-21085362 None:intergenic 45.0%
ACCATCCGATCATGATCTGA+CGG + chr4_2:21085667-21085686 Msa0594050:intron 45.0%
TCACAAGACTCGTGGGTATA+AGG - chr4_2:21085822-21085841 None:intergenic 45.0%
AACCATGTCACAAGACTCGT+GGG - chr4_2:21085829-21085848 None:intergenic 45.0%
AAACCATGTCACAAGACTCG+TGG - chr4_2:21085830-21085849 None:intergenic 45.0%
! TGGAGAGAGTGTACTTCATG+TGG + chr4_2:21086113-21086132 Msa0594050:three_prime_UTR 45.0%
AGAGTGTACTTCATGTGGCA+AGG + chr4_2:21086118-21086137 Msa0594050:three_prime_UTR 45.0%
! AAGTCCTGAAGTACTTGCAC+AGG - chr4_2:21086307-21086326 None:intergenic 45.0%
ACAAGGTGAAGTGAGCTTAC+AGG - chr4_2:21086333-21086352 None:intergenic 45.0%
! AATGTGAGGGGTATGCAAGT+TGG + chr4_2:21086880-21086899 Msa0594050:three_prime_UTR 45.0%
! ATGTGAGGGGTATGCAAGTT+GGG + chr4_2:21086881-21086900 Msa0594050:three_prime_UTR 45.0%
CCAACAGAGGGTAAAACTTC+TGG - chr4_2:21086988-21087007 None:intergenic 45.0%
! CCAGAAGTTTTACCCTCTGT+TGG + chr4_2:21086985-21087004 Msa0594050:three_prime_UTR 45.0%
GCTTCCAAATTCTCCAACAG+AGG - chr4_2:21087001-21087020 None:intergenic 45.0%
ATTTGGCAAAGGAGCGGTAA+GGG - chr4_2:21087136-21087155 None:intergenic 45.0%
AAAGGGATTTGGCAAAGGAG+CGG - chr4_2:21087142-21087161 None:intergenic 45.0%
GATCTAGACGCCAATAGAAG+TGG - chr4_2:21087210-21087229 None:intergenic 45.0%
TCTAAGCCTGGAGATAGAGT+TGG - chr4_2:21087261-21087280 None:intergenic 45.0%
ACTCTATCTCCAGGCTTAGA+AGG + chr4_2:21087261-21087280 Msa0594050:three_prime_UTR 45.0%
CTTAGAAGGAAACACAGGCA+TGG + chr4_2:21087275-21087294 Msa0594050:three_prime_UTR 45.0%
! AGGCCTTGCTATACGTATCT+GGG - chr4_2:21087304-21087323 None:intergenic 45.0%
ATCAGTTGCTTCCGCGATAT+TGG + chr4_2:21087345-21087364 Msa0594050:three_prime_UTR 45.0%
GTAATTCTGGGCCAATATCG+CGG - chr4_2:21087359-21087378 None:intergenic 45.0%
TTCAAAGAGTGGCACAATGG+TGG - chr4_2:21087562-21087581 None:intergenic 45.0%
ATGCTTAGTGCAAGTGATGC+TGG + chr4_2:21087584-21087603 Msa0594050:three_prime_UTR 45.0%
CATCTTGGATACGCAAAGGA+AGG - chr4_2:21087797-21087816 None:intergenic 45.0%
CCCTGAGGGGAAACTTATAA+TGG + chr4_2:21088498-21088517 Msa0594050:three_prime_UTR 45.0%
CCCATTATAAGTTTCCCCTC+AGG - chr4_2:21088502-21088521 None:intergenic 45.0%
TGGCCTTCTTCAGTCTCAAA+AGG + chr4_2:21088721-21088740 Msa0594050:three_prime_UTR 45.0%
GGCCTTCTTCAGTCTCAAAA+GGG + chr4_2:21088722-21088741 Msa0594050:three_prime_UTR 45.0%
! TCTAGAGAGCGCATTTAGGT+GGG - chr4_2:21088759-21088778 None:intergenic 45.0%
! TTCTAGAGAGCGCATTTAGG+TGG - chr4_2:21088760-21088779 None:intergenic 45.0%
!! GAGGTTGCTTATTGATAGCG+AGG + chr4_2:21088916-21088935 Msa0594050:three_prime_UTR 45.0%
!! TATTGATAGCGAGGATGCAC+TGG + chr4_2:21088925-21088944 Msa0594050:three_prime_UTR 45.0%
CACTGGAGCTGAAACTTACT+TGG + chr4_2:21088942-21088961 Msa0594050:three_prime_UTR 45.0%
GCTGAAACTTACTTGGGAAG+AGG + chr4_2:21088949-21088968 Msa0594050:three_prime_UTR 45.0%
ACACTTGGCTTAACTTCTGG+AGG - chr4_2:21088995-21089014 None:intergenic 45.0%
TCCTCGATCATGACAACACT+TGG - chr4_2:21089010-21089029 None:intergenic 45.0%
CATGCATGCATGATAGAGAG+GGG + chr4_2:21089112-21089131 Msa0594050:intron 45.0%
TCACCAGGACTGAAAAGCTT+TGG - chr4_2:21089231-21089250 None:intergenic 45.0%
GACATGGACTTTACCTGCAT+TGG + chr4_2:21089283-21089302 Msa0594050:intron 45.0%
! GCGTATTGATAGACCAATGC+AGG - chr4_2:21089299-21089318 None:intergenic 45.0%
CTCTTCTTTCCAAACACAGG+AGG - chr4_2:21089502-21089521 None:intergenic 45.0%
! CCAAAAATGGCGGAAGTTAC+CGG + chr4_2:21089724-21089743 Msa0594050:three_prime_UTR 45.0%
GGGGGAATAAGTACATCAAC+CGG - chr4_2:21089746-21089765 None:intergenic 45.0%
TCTCCATACACGTCCACTTA+GGG - chr4_2:21089766-21089785 None:intergenic 45.0%
TTCTCCATACACGTCCACTT+AGG - chr4_2:21089767-21089786 None:intergenic 45.0%
! GGACGTGTATGGAGAACTTT+TGG + chr4_2:21089771-21089790 Msa0594050:three_prime_UTR 45.0%
GATCAAAGCAGGTGAGTAGA+AGG + chr4_2:21089794-21089813 Msa0594050:intron 45.0%
ACAGCATCGCATAAGCACAA+AGG - chr4_2:21089861-21089880 None:intergenic 45.0%
TCTCAGGGACACTGATAGAT+TGG + chr4_2:21090252-21090271 Msa0594050:intron 45.0%
CTCAGGGACACTGATAGATT+GGG + chr4_2:21090253-21090272 Msa0594050:intron 45.0%
TCAGGGACACTGATAGATTG+GGG + chr4_2:21090254-21090273 Msa0594050:intron 45.0%
AGGAGAATTGACAGTCCGTA+CGG + chr4_2:21090451-21090470 Msa0594050:intron 45.0%
TGTGTACCTAGCATGGCAAT+GGG + chr4_2:21090773-21090792 Msa0594050:intron 45.0%
CTTGGTATGGGTAGGGTAAT+GGG - chr4_2:21090837-21090856 None:intergenic 45.0%
CATTACCCTACCCATACCAA+GGG + chr4_2:21090836-21090855 Msa0594050:intron 45.0%
ATTACCCTACCCATACCAAG+GGG + chr4_2:21090837-21090856 Msa0594050:intron 45.0%
GGTTCAAATTCTCATCCCCT+TGG - chr4_2:21090855-21090874 None:intergenic 45.0%
! AAGTAGATTCAGGACGGGTT+TGG + chr4_2:21091081-21091100 Msa0594050:intron 45.0%
! AGTAGATTCAGGACGGGTTT+GGG + chr4_2:21091082-21091101 Msa0594050:intron 45.0%
GGTATGGGACGGGTATATAT+AGG - chr4_2:21091121-21091140 None:intergenic 45.0%
TTCAAAACACGGGTATGGGA+CGG - chr4_2:21091132-21091151 None:intergenic 45.0%
TTAGCAAATGCTGCGGTACT+TGG + chr4_2:21091446-21091465 Msa0594050:three_prime_UTR 45.0%
! TGTCTTGTTGTGGTCAACAC+TGG - chr4_2:21091500-21091519 None:intergenic 45.0%
TGGCTGGATACAGACAATAC+AGG - chr4_2:21091546-21091565 None:intergenic 45.0%
CAGACATTACACGTGCATGT+AGG - chr4_2:21091593-21091612 None:intergenic 45.0%
TCTGCATGACAGTTAAACGC+CGG + chr4_2:21091609-21091628 Msa0594050:three_prime_UTR 45.0%
TCATTCTCCGAACCATCAAC+TGG - chr4_2:21091764-21091783 None:intergenic 45.0%
! ATGGTTCGGAGAATGAAGCA+AGG + chr4_2:21091768-21091787 Msa0594050:three_prime_UTR 45.0%
! TGGTTCGGAGAATGAAGCAA+GGG + chr4_2:21091769-21091788 Msa0594050:three_prime_UTR 45.0%
ACTTGAATTGCCAACCGGAT+CGG + chr4_2:21091854-21091873 Msa0594050:three_prime_UTR 45.0%
! GTCATCATGCTCAGAGTGTT+TGG - chr4_2:21091898-21091917 None:intergenic 45.0%
TGAAGAAGCAAATCTCCCGT+TGG + chr4_2:21091924-21091943 Msa0594050:three_prime_UTR 45.0%
TGCTTCAGGTATGTCTCCAA+CGG - chr4_2:21091943-21091962 None:intergenic 45.0%
ACAGACAACCAATGAGAGTG+AGG + chr4_2:21092023-21092042 Msa0594050:three_prime_UTR 45.0%
CAGACAACCAATGAGAGTGA+GGG + chr4_2:21092024-21092043 Msa0594050:three_prime_UTR 45.0%
TTGTCTTCCCTCACTCTCAT+TGG - chr4_2:21092034-21092053 None:intergenic 45.0%
GAGTGAGGGAAGACAAAATG+AGG + chr4_2:21092038-21092057 Msa0594050:three_prime_UTR 45.0%
TGCTTCTGCAGTTCATGAAC+AGG + chr4_2:21092071-21092090 Msa0594050:three_prime_UTR 45.0%
GACAGTCCTGAAGAGAATAG+TGG + chr4_2:21092096-21092115 Msa0594050:three_prime_UTR 45.0%
TCTTGCCCACTATTCTCTTC+AGG - chr4_2:21092105-21092124 None:intergenic 45.0%
! TTAGGTTGTACACCAGTGTG+AGG + chr4_2:21092338-21092357 Msa0594050:three_prime_UTR 45.0%
! GTAAAGCATCTTCTTGCCAG+TGG + chr4_2:21092373-21092392 Msa0594050:three_prime_UTR 45.0%
!! TAAAAATAACTATAATATAT+GGG - chr4_2:21087688-21087707 None:intergenic 5.0%
!! ATAAAAATAACTATAATATA+TGG - chr4_2:21087689-21087708 None:intergenic 5.0%
!!! ATTATTTAGATTTTTTTTTT+TGG + chr4_2:21088046-21088065 Msa0594050:intron 5.0%
TGGAGAGAGAGTTTGAACGG+AGG - chr4_2:21084019-21084038 None:intergenic 50.0%
GCGTGGAGAGAGAGTTTGAA+CGG - chr4_2:21084022-21084041 None:intergenic 50.0%
TTGGTTATGGAGATAGGCGG+CGG - chr4_2:21084097-21084116 None:intergenic 50.0%
GTTCCGGTCACAGTTGGTTA+TGG - chr4_2:21084110-21084129 None:intergenic 50.0%
CGGAACTTCCCTCAAACTTC+TGG + chr4_2:21084124-21084143 Msa0594050:CDS 50.0%
! GTGGAACCTCTACGTCGATT+CGG + chr4_2:21084310-21084329 Msa0594050:CDS 50.0%
GCCTAACTCAACAGAGCTAG+TGG + chr4_2:21085083-21085102 Msa0594050:intron 50.0%
! GTGGTGATGACGTGAGACAT+AGG + chr4_2:21085102-21085121 Msa0594050:intron 50.0%
AGCCCATCGAAATTGGCACT+GGG - chr4_2:21085161-21085180 None:intergenic 50.0%
TAGCCCATCGAAATTGGCAC+TGG - chr4_2:21085162-21085181 None:intergenic 50.0%
! CCCTCAGATTAGTCGGTCTT+AGG + chr4_2:21085226-21085245 Msa0594050:intron 50.0%
GCCTAAGACCGACTAATCTG+AGG - chr4_2:21085230-21085249 None:intergenic 50.0%
TTTCTGTGGTTACCCCAGGT+CGG + chr4_2:21085316-21085335 Msa0594050:intron 50.0%
TGCATGCAATCAGTGACTGC+AGG - chr4_2:21085630-21085649 None:intergenic 50.0%
CATGCATTCACAGTGACTGC+AGG + chr4_2:21085644-21085663 Msa0594050:intron 50.0%
ACCGTCAGATCATGATCGGA+TGG - chr4_2:21085671-21085690 None:intergenic 50.0%
TGAACAGTCCGATCTCGATC+AGG + chr4_2:21085749-21085768 Msa0594050:intron 50.0%
! TACCCACGAGTCTTGTGACA+TGG + chr4_2:21085824-21085843 Msa0594050:intron 50.0%
TATCTGCAGCGTCTCCATTG+TGG + chr4_2:21086222-21086241 Msa0594050:intron 50.0%
TTCCCAGCAGTGCATATCTC+TGG + chr4_2:21086846-21086865 Msa0594050:three_prime_UTR 50.0%
AGCCAGAGATATGCACTGCT+GGG - chr4_2:21086851-21086870 None:intergenic 50.0%
TAGCCAGAGATATGCACTGC+TGG - chr4_2:21086852-21086871 None:intergenic 50.0%
GATTTGGCAAAGGAGCGGTA+AGG - chr4_2:21087137-21087156 None:intergenic 50.0%
CTAGACGCCAATAGAAGTGG+AGG - chr4_2:21087207-21087226 None:intergenic 50.0%
! AGAGTTGGCCTAGGAGGTTT+AGG - chr4_2:21087246-21087265 None:intergenic 50.0%
CCTGTGTTTCCTTCTAAGCC+TGG - chr4_2:21087273-21087292 None:intergenic 50.0%
CCAGGCTTAGAAGGAAACAC+AGG + chr4_2:21087270-21087289 Msa0594050:three_prime_UTR 50.0%
! GAGGCCTTGCTATACGTATC+TGG - chr4_2:21087305-21087324 None:intergenic 50.0%
! ACTGATTCCTTCCCGTCCTT+CGG - chr4_2:21087331-21087350 None:intergenic 50.0%
GCAAGTGATGCTGGTCGAAT+TGG + chr4_2:21087593-21087612 Msa0594050:three_prime_UTR 50.0%
!! CCTCAGGTTGAGAGATAGGA+GGG - chr4_2:21087773-21087792 None:intergenic 50.0%
CCTCCTATCTCTCAACCTGA+GGG + chr4_2:21087771-21087790 Msa0594050:three_prime_UTR 50.0%
CAGTCTATGCAACTGCAAGC+TGG + chr4_2:21087907-21087926 Msa0594050:three_prime_UTR 50.0%
ATTTAGCCGTATGGACCCTG+AGG + chr4_2:21088483-21088502 Msa0594050:three_prime_UTR 50.0%
TTTAGCCGTATGGACCCTGA+GGG + chr4_2:21088484-21088503 Msa0594050:three_prime_UTR 50.0%
!! GAACTCAGTTGGTGCTGACA+TGG + chr4_2:21088784-21088803 Msa0594050:three_prime_UTR 50.0%
!! CAGTTGGTGCTGACATGGAT+TGG + chr4_2:21088789-21088808 Msa0594050:three_prime_UTR 50.0%
GTTGTCTTTACCACCTGTGC+TGG + chr4_2:21088850-21088869 Msa0594050:three_prime_UTR 50.0%
TTCTTCTCAGGAACCAGCAC+AGG - chr4_2:21088866-21088885 None:intergenic 50.0%
ACTTACTTGGGAAGAGGCTC+AGG + chr4_2:21088955-21088974 Msa0594050:three_prime_UTR 50.0%
! CTTGGCTTAACTTCTGGAGG+TGG - chr4_2:21088992-21089011 None:intergenic 50.0%
! GCCAAGTGTTGTCATGATCG+AGG + chr4_2:21089006-21089025 Msa0594050:three_prime_UTR 50.0%
ATTCAGGAGCCTCCTGTGTT+TGG + chr4_2:21089490-21089509 Msa0594050:intron 50.0%
ACCACAGGATAAGTGAGCAG+TGG + chr4_2:21089684-21089703 Msa0594050:intron 50.0%
TCCACTGCTCACTTATCCTG+TGG - chr4_2:21089688-21089707 None:intergenic 50.0%
!! CCGGTAACTTCCGCCATTTT+TGG - chr4_2:21089727-21089746 None:intergenic 50.0%
TCCATACACGTCCACTTAGG+GGG - chr4_2:21089764-21089783 None:intergenic 50.0%
CTCCATACACGTCCACTTAG+GGG - chr4_2:21089765-21089784 None:intergenic 50.0%
GAATTGACAGTCCGTACGGT+TGG + chr4_2:21090455-21090474 Msa0594050:intron 50.0%
GCTAACCTGTGTACCTAGCA+TGG + chr4_2:21090766-21090785 Msa0594050:intron 50.0%
CATTGCCATGCTAGGTACAC+AGG - chr4_2:21090774-21090793 None:intergenic 50.0%
CTGTGTACCTAGCATGGCAA+TGG + chr4_2:21090772-21090791 Msa0594050:intron 50.0%
ACCTAGCATGGCAATGGGTA+CGG + chr4_2:21090778-21090797 Msa0594050:intron 50.0%
CCTTGGTATGGGTAGGGTAA+TGG - chr4_2:21090838-21090857 None:intergenic 50.0%
CCATTACCCTACCCATACCA+AGG + chr4_2:21090835-21090854 Msa0594050:intron 50.0%
TCATCCCCTTGGTATGGGTA+GGG - chr4_2:21090844-21090863 None:intergenic 50.0%
ATGATACCCGAACCCATCAC+GGG - chr4_2:21090883-21090902 None:intergenic 50.0%
GATGATACCCGAACCCATCA+CGG - chr4_2:21090884-21090903 None:intergenic 50.0%
TCAAAACACGGGTATGGGAC+GGG - chr4_2:21091131-21091150 None:intergenic 50.0%
GAAGATTCACGATCCAGAGC+TGG - chr4_2:21091413-21091432 None:intergenic 50.0%
! GCTCTGGATCGTGAATCTTC+TGG + chr4_2:21091413-21091432 Msa0594050:three_prime_UTR 50.0%
GGAGATGATGCAAGTGACTC+TGG + chr4_2:21091467-21091486 Msa0594050:three_prime_UTR 50.0%
ATGATGCAAGTGACTCTGGC+AGG + chr4_2:21091471-21091490 Msa0594050:three_prime_UTR 50.0%
!! ATGACGAGGGTGTCTTGTTG+TGG - chr4_2:21091510-21091529 None:intergenic 50.0%
CAACAAGACACCCTCGTCAT+AGG + chr4_2:21091510-21091529 Msa0594050:three_prime_UTR 50.0%
TCTGTATCCAGCCACCAAGT+GGG + chr4_2:21091552-21091571 Msa0594050:three_prime_UTR 50.0%
TTGTGTTTGCCCTTCCCACT+TGG - chr4_2:21091569-21091588 None:intergenic 50.0%
TCAGCAATCATGGAGGACCA+AGG + chr4_2:21091700-21091719 Msa0594050:three_prime_UTR 50.0%
GGTTCGGAGAATGAAGCAAG+GGG + chr4_2:21091770-21091789 Msa0594050:three_prime_UTR 50.0%
AAGCATCAGCCACTTGGTCT+TGG - chr4_2:21091819-21091838 None:intergenic 50.0%
CAAGTGGCTGATGCTTGCAA+GGG + chr4_2:21091823-21091842 Msa0594050:three_prime_UTR 50.0%
CTTGAATTGCCAACCGGATC+GGG + chr4_2:21091855-21091874 Msa0594050:three_prime_UTR 50.0%
GCTTCAGGTATGTCTCCAAC+GGG - chr4_2:21091942-21091961 None:intergenic 50.0%
TTGTACACCAGTGTGAGGCA+AGG + chr4_2:21092343-21092362 Msa0594050:three_prime_UTR 50.0%
TTCAACTCCTTGCCTCACAC+TGG - chr4_2:21092353-21092372 None:intergenic 50.0%
CGGAGGAGAAGAAGTTAGGG+AGG - chr4_2:21084002-21084021 None:intergenic 55.0%
AGGGAAGTTCCGGTCACAGT+TGG - chr4_2:21084116-21084135 None:intergenic 55.0%
!! GAACCTCTACGTCGATTCGG+TGG + chr4_2:21084313-21084332 Msa0594050:CDS 55.0%
TCCCCCAGTGCCAATTTCGA+TGG + chr4_2:21085155-21085174 Msa0594050:intron 55.0%
! CCCATCGAAATTGGCACTGG+GGG - chr4_2:21085159-21085178 None:intergenic 55.0%
CCCCCAGTGCCAATTTCGAT+GGG + chr4_2:21085156-21085175 Msa0594050:intron 55.0%
GCCCATCGAAATTGGCACTG+GGG - chr4_2:21085160-21085179 None:intergenic 55.0%
CGTGACTGCCTGATCGAGAT+CGG - chr4_2:21085760-21085779 None:intergenic 55.0%
! GGAGATAGAGTTGGCCTAGG+AGG - chr4_2:21087252-21087271 None:intergenic 55.0%
! CCTGGAGATAGAGTTGGCCT+AGG - chr4_2:21087255-21087274 None:intergenic 55.0%
CCTAGGCCAACTCTATCTCC+AGG + chr4_2:21087252-21087271 Msa0594050:three_prime_UTR 55.0%
TGCTGGTCGAATTGGTCGCT+TGG + chr4_2:21087601-21087620 Msa0594050:three_prime_UTR 55.0%
CCCTCCTATCTCTCAACCTG+AGG + chr4_2:21087770-21087789 Msa0594050:three_prime_UTR 55.0%
!! CCCTCAGGTTGAGAGATAGG+AGG - chr4_2:21087774-21087793 None:intergenic 55.0%
!! AGGCCCTCAGGTTGAGAGAT+AGG - chr4_2:21087777-21087796 None:intergenic 55.0%
ATACGCAAAGGAAGGCCCTC+AGG - chr4_2:21087789-21087808 None:intergenic 55.0%
CAACTGCAAGCTGGCGATAC+TGG + chr4_2:21087916-21087935 Msa0594050:three_prime_UTR 55.0%
TTAGCCGTATGGACCCTGAG+GGG + chr4_2:21088485-21088504 Msa0594050:three_prime_UTR 55.0%
GTTTCCCCTCAGGGTCCATA+CGG - chr4_2:21088492-21088511 None:intergenic 55.0%
TTCTCAGGAACCAGCACAGG+TGG - chr4_2:21088863-21088882 None:intergenic 55.0%
TCCCCCTAAGTGGACGTGTA+TGG + chr4_2:21089760-21089779 Msa0594050:three_prime_UTR 55.0%
GCTTATGCGATGCTGTCAGC+AGG + chr4_2:21089865-21089884 Msa0594050:intron 55.0%
CCTAGCATGGCAATGGGTAC+GGG + chr4_2:21090779-21090798 Msa0594050:intron 55.0%
CTCATCCCCTTGGTATGGGT+AGG - chr4_2:21090845-21090864 None:intergenic 55.0%
TTTGAACCCCATCCCCGTGA+TGG + chr4_2:21090867-21090886 Msa0594050:intron 55.0%
TTGAACCCCATCCCCGTGAT+GGG + chr4_2:21090868-21090887 Msa0594050:intron 55.0%
TGATACCCGAACCCATCACG+GGG - chr4_2:21090882-21090901 None:intergenic 55.0%
! AGATTCAGGACGGGTTTGGG+TGG + chr4_2:21091085-21091104 Msa0594050:intron 55.0%
! GATTCAGGACGGGTTTGGGT+GGG + chr4_2:21091086-21091105 Msa0594050:intron 55.0%
TACACAGGTCACCATACCCG+TGG - chr4_2:21091186-21091205 None:intergenic 55.0%
!! CAGACAATACAGGAGCACCC+AGG - chr4_2:21091536-21091555 None:intergenic 55.0%
GTCTGTATCCAGCCACCAAG+TGG + chr4_2:21091551-21091570 Msa0594050:three_prime_UTR 55.0%
TATCCAGCCACCAAGTGGGA+AGG + chr4_2:21091556-21091575 Msa0594050:three_prime_UTR 55.0%
ATCCAGCCACCAAGTGGGAA+GGG + chr4_2:21091557-21091576 Msa0594050:three_prime_UTR 55.0%
TGTTTGCCCTTCCCACTTGG+TGG - chr4_2:21091566-21091585 None:intergenic 55.0%
CCTTGCAAGCATCAGCCACT+TGG - chr4_2:21091825-21091844 None:intergenic 55.0%
CCAAGTGGCTGATGCTTGCA+AGG + chr4_2:21091822-21091841 Msa0594050:three_prime_UTR 55.0%
GCTTGCATGTCTTCCCGATC+CGG - chr4_2:21091871-21091890 None:intergenic 55.0%
GATCGGGAAGACATGCAAGC+TGG + chr4_2:21091871-21091890 Msa0594050:three_prime_UTR 55.0%
GTTATGGAGATAGGCGGCGG+TGG - chr4_2:21084094-21084113 None:intergenic 60.0%
!! CCTCTACGTCGATTCGGTGG+CGG + chr4_2:21084316-21084335 Msa0594050:CDS 60.0%
!! ACGTCGATTCGGTGGCGGAA+AGG + chr4_2:21084321-21084340 Msa0594050:CDS 60.0%
!! CGATTCGGTGGCGGAAAGGT+TGG + chr4_2:21084325-21084344 Msa0594050:CDS 60.0%
ATAGCAAGGCCTCCTGCCGA+AGG + chr4_2:21087312-21087331 Msa0594050:three_prime_UTR 60.0%
ATTCCTTCCCGTCCTTCGGC+AGG - chr4_2:21087327-21087346 None:intergenic 60.0%
CCCGTACCCATTGCCATGCT+AGG - chr4_2:21090782-21090801 None:intergenic 60.0%
!! GACAAGCATCGGCAAGCCAG+AGG + chr4_2:21091387-21091406 Msa0594050:three_prime_UTR 60.0%
AGACACCCTCGTCATAGGCC+TGG + chr4_2:21091515-21091534 Msa0594050:three_prime_UTR 60.0%
GACACCCTCGTCATAGGCCT+GGG + chr4_2:21091516-21091535 Msa0594050:three_prime_UTR 60.0%
AGCACCCAGGCCTATGACGA+GGG - chr4_2:21091523-21091542 None:intergenic 60.0%
GCATGTCTTCCCGATCCGGT+TGG - chr4_2:21091867-21091886 None:intergenic 60.0%
! GCGGCGAGTTGCGGTGGTTT+TGG - chr4_2:21084063-21084082 None:intergenic 65.0%
ATGGAGATAGGCGGCGGTGG+TGG - chr4_2:21084091-21084110 None:intergenic 65.0%
CCGCCACCGAATCGACGTAG+AGG - chr4_2:21084319-21084338 None:intergenic 65.0%
TGGTTACCCCAGGTCGGACC+TGG + chr4_2:21085322-21085341 Msa0594050:intron 65.0%
GGTTACCCCAGGTCGGACCT+GGG + chr4_2:21085323-21085342 Msa0594050:intron 65.0%
GAGATCCCAGGTCCGACCTG+GGG - chr4_2:21085331-21085350 None:intergenic 65.0%
GGAGATCCCAGGTCCGACCT+GGG - chr4_2:21085332-21085351 None:intergenic 65.0%
AGGAGATCCCAGGTCCGACC+TGG - chr4_2:21085333-21085352 None:intergenic 65.0%
CAAGGCCTCCTGCCGAAGGA+CGG + chr4_2:21087316-21087335 Msa0594050:three_prime_UTR 65.0%
AAGGCCTCCTGCCGAAGGAC+GGG + chr4_2:21087317-21087336 Msa0594050:three_prime_UTR 65.0%
CCGAACCCATCACGGGGATG+GGG - chr4_2:21090876-21090895 None:intergenic 65.0%
!! CCCCATCCCCGTGATGGGTT+CGG + chr4_2:21090873-21090892 Msa0594050:intron 65.0%
CCCGAACCCATCACGGGGAT+GGG - chr4_2:21090877-21090896 None:intergenic 65.0%
!! CCCATCCCCGTGATGGGTTC+GGG + chr4_2:21090874-21090893 Msa0594050:intron 65.0%
ACCCGAACCCATCACGGGGA+TGG - chr4_2:21090878-21090897 None:intergenic 65.0%
! CACGATCCAGAGCTGGCCTC+TGG - chr4_2:21091406-21091425 None:intergenic 65.0%
GAGCACCCAGGCCTATGACG+AGG - chr4_2:21091524-21091543 None:intergenic 65.0%
! TGCCCTTCCCACTTGGTGGC+TGG - chr4_2:21091562-21091581 None:intergenic 65.0%
!! ATAGGCGGCGGTGGTGGTGG+CGG - chr4_2:21084085-21084104 None:intergenic 70.0%
! GAGATAGGCGGCGGTGGTGG+TGG - chr4_2:21084088-21084107 None:intergenic 70.0%
CCTTCCCGTCCTTCGGCAGG+AGG - chr4_2:21087324-21087343 None:intergenic 70.0%
CCTCCTGCCGAAGGACGGGA+AGG + chr4_2:21087321-21087340 Msa0594050:three_prime_UTR 70.0%
GGCAAGCCAGAGGCCAGCTC+TGG + chr4_2:21091397-21091416 Msa0594050:three_prime_UTR 70.0%
!! GTGGTGGCGGCGGCGAGTTG+CGG - chr4_2:21084072-21084091 None:intergenic 75.0%
! GTGGCGGCGGCGAGTTGCGG+TGG - chr4_2:21084069-21084088 None:intergenic 80.0%
!!! GGCGGCGGTGGTGGTGGCGG+CGG - chr4_2:21084082-21084101 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 21083822 21092538 21083822 ID=Msa0594050;Name=Msa0594050
chr4_2 mRNA 21083822 21092538 21083822 ID=Msa0594050-mRNA-1;Parent=Msa0594050;Name=Msa0594050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=230|1|1|1|0.66|0.76|13|3005|73
chr4_2 exon 21083822 21084166 21083822 ID=Msa0594050-mRNA-1:exon:5906;Parent=Msa0594050-mRNA-1
chr4_2 exon 21084258 21084391 21084258 ID=Msa0594050-mRNA-1:exon:5907;Parent=Msa0594050-mRNA-1
chr4_2 exon 21086058 21086139 21086058 ID=Msa0594050-mRNA-1:exon:5908;Parent=Msa0594050-mRNA-1
chr4_2 exon 21086231 21086332 21086231 ID=Msa0594050-mRNA-1:exon:5909;Parent=Msa0594050-mRNA-1
chr4_2 exon 21086791 21087408 21086791 ID=Msa0594050-mRNA-1:exon:5910;Parent=Msa0594050-mRNA-1
chr4_2 exon 21087549 21087646 21087549 ID=Msa0594050-mRNA-1:exon:5911;Parent=Msa0594050-mRNA-1
chr4_2 exon 21087762 21087937 21087762 ID=Msa0594050-mRNA-1:exon:5912;Parent=Msa0594050-mRNA-1
chr4_2 exon 21088479 21088555 21088479 ID=Msa0594050-mRNA-1:exon:5913;Parent=Msa0594050-mRNA-1
chr4_2 exon 21088626 21089051 21088626 ID=Msa0594050-mRNA-1:exon:5914;Parent=Msa0594050-mRNA-1
chr4_2 exon 21089496 21089545 21089496 ID=Msa0594050-mRNA-1:exon:5915;Parent=Msa0594050-mRNA-1
chr4_2 exon 21089691 21089804 21089691 ID=Msa0594050-mRNA-1:exon:5916;Parent=Msa0594050-mRNA-1
chr4_2 exon 21089887 21089954 21089887 ID=Msa0594050-mRNA-1:exon:5917;Parent=Msa0594050-mRNA-1
chr4_2 exon 21091372 21092538 21091372 ID=Msa0594050-mRNA-1:exon:5918;Parent=Msa0594050-mRNA-1
chr4_2 five_prime_UTR 21083822 21084051 21083822 ID=Msa0594050-mRNA-1:five_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 CDS 21084052 21084166 21084052 ID=Msa0594050-mRNA-1:cds;Parent=Msa0594050-mRNA-1
chr4_2 CDS 21084258 21084364 21084258 ID=Msa0594050-mRNA-1:cds;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21084365 21084391 21084365 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21086058 21086139 21086058 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21086231 21086332 21086231 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21086791 21087408 21086791 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21087549 21087646 21087549 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21087762 21087937 21087762 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21088479 21088555 21088479 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21088626 21089051 21088626 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21089496 21089545 21089496 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21089691 21089804 21089691 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21089887 21089954 21089887 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
chr4_2 three_prime_UTR 21091372 21092538 21091372 ID=Msa0594050-mRNA-1:three_prime_utr;Parent=Msa0594050-mRNA-1
Gene Sequence

>Msa0594050

ATGCAAATCCAAAACCACCGCAACTCGCCGCCGCCACCACCACCGCCGCCTATCTCCATAACCAACTGTGACCGGAACTTCCCTCAAACTTCTGGTGACGTTAGCTTTGATTCCGGTTGTGGAATTGAAGTTGAAAATGGAGTCAAAGTGTTGCATGAACGTTGTTTGTGGAACCTCTACGTCGATTCGGTGGCGGAAAGGTTGGATTCTTCGATCCGGTGA
Protein sequence

>Msa0594050

MQIQNHRNSPPPPPPPPISITNCDRNFPQTSGDVSFDSGCGIEVENGVKVLHERCLWNLYVDSVAERLDSSIR*