AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0719880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0719880 MtrunA17_Chr5g0410171 65.341 704 116 10 1 578 32 733 0.0 851
Msa0719880 MtrunA17_Chr5g0410341 85.460 337 5 2 288 580 411 747 0.0 562
Msa0719880 MtrunA17_Chr5g0410341 87.540 313 15 4 1 289 30 342 0.0 556
Msa0719880 MtrunA17_Chr5g0410201 74.924 327 38 2 296 578 1 327 3.21e-168 481
Msa0719880 MtrunA17_Chr5g0410271 74.540 326 39 2 298 579 2 327 1.19e-165 474
Msa0719880 MtrunA17_Chr6g0457101 39.882 677 291 16 1 579 30 688 3.97e-140 422
Msa0719880 MtrunA17_Chr5g0410461 51.762 369 124 7 260 576 96 462 3.76e-108 332
Msa0719880 MtrunA17_Chr6g0456141 49.555 337 122 5 288 579 51 384 1.94e-100 310
Msa0719880 MtrunA17_Chr5g0410371 57.095 296 77 4 329 576 1 294 1.41e-99 304
Msa0719880 MtrunA17_Chr6g0456101 34.868 717 310 24 1 572 30 734 1.68e-99 318
Msa0719880 MtrunA17_Chr5g0410191 80.368 163 32 0 418 580 32 194 1.89e-84 261
Msa0719880 MtrunA17_Chr5g0410581 30.720 778 325 25 1 577 31 795 1.26e-78 264
Msa0719880 MtrunA17_Chr5g0410291 66.492 191 45 3 110 283 1 189 9.10e-78 244
Msa0719880 MtrunA17_Chr5g0410211 63.918 194 50 4 110 283 1 194 1.85e-71 228
Msa0719880 MtrunA17_Chr5g0410181 79.104 134 28 0 446 579 1 134 2.71e-68 217
Msa0719880 MtrunA17_Chr2g0297701 30.686 554 297 18 90 580 44 573 8.71e-58 203
Msa0719880 MtrunA17_Chr5g0443001 30.651 584 294 22 91 576 31 601 4.14e-55 196
Msa0719880 MtrunA17_Chr2g0297691 27.179 677 368 23 4 576 36 691 2.22e-49 182
Msa0719880 MtrunA17_Chr2g0297681 26.379 671 377 22 4 575 36 688 9.59e-47 174
Msa0719880 MtrunA17_Chr2g0297651 26.449 673 375 21 4 576 38 690 2.27e-46 173
Msa0719880 MtrunA17_Chr5g0410451 49.697 165 78 1 418 577 71 235 8.14e-46 161
Msa0719880 MtrunA17_Chr3g0100741 25.847 561 310 14 91 559 33 579 2.03e-44 166
Msa0719880 MtrunA17_Chr5g0410541 52.121 165 73 2 418 577 53 216 5.58e-44 156
Msa0719880 MtrunA17_Chr2g0297491 35.971 278 144 4 330 576 103 377 1.86e-43 159
Msa0719880 MtrunA17_Chr6g0456151 42.023 257 118 9 1 236 30 276 7.73e-43 155
Msa0719880 MtrunA17_Chr5g0410471 45.909 220 105 5 5 221 105 313 4.62e-41 151
Msa0719880 MtrunA17_Chr3g0100301 41.327 196 78 2 407 572 209 397 2.94e-39 148
Msa0719880 MtrunA17_Chr2g0297711 27.186 526 298 16 90 576 47 526 2.18e-38 148
Msa0719880 MtrunA17_Chr2g0297481 34.420 276 147 5 330 576 201 471 4.32e-38 147
Msa0719880 MtrunA17_Chr3g0096941 25.260 578 319 17 91 570 33 595 2.20e-37 146
Msa0719880 MtrunA17_Chr5g0410411 39.464 261 107 9 1 221 30 279 2.06e-36 139
Msa0719880 MtrunA17_Chr5g0410381 39.837 246 101 8 82 286 3 242 3.96e-36 135
Msa0719880 MtrunA17_Chr5g0410251 65.854 82 28 0 1 82 28 109 7.96e-33 121
Msa0719880 MtrunA17_Chr2g0286601 33.106 293 141 6 311 558 371 653 1.94e-30 126
Msa0719880 MtrunA17_Chr5g0410511 42.949 156 80 1 418 573 32 178 1.01e-29 116
Msa0719880 MtrunA17_Chr3g0098481 29.560 318 159 8 316 576 22 331 4.38e-29 118
Msa0719880 MtrunA17_Chr3g0102001 30.293 307 147 7 328 577 440 736 8.77e-27 115
Msa0719880 MtrunA17_Chr2g0286551 31.488 289 149 6 329 572 370 654 5.63e-25 109
Msa0719880 MtrunA17_Chr2g0286561 38.849 139 78 1 420 558 47 178 1.87e-24 101
Msa0719880 MtrunA17_Chr5g0410501 40.972 144 68 3 289 417 147 288 5.79e-24 102
Msa0719880 MtrunA17_Chr3g0098301 27.184 309 170 8 316 572 88 393 3.08e-22 99.4
Msa0719880 MtrunA17_Chr5g0410561 39.336 211 113 8 32 236 2 203 9.13e-22 94.0
Msa0719880 MtrunA17_Chr5g0439081 36.076 158 94 3 417 569 41 196 2.76e-21 92.8
Msa0719880 MtrunA17_Chr5g0410551 46.667 105 39 3 329 418 1 103 1.15e-20 87.8
Msa0719880 MtrunA17_Chr1g0211541 25.541 462 239 19 101 497 6 427 3.23e-20 94.4
Msa0719880 MtrunA17_Chr2g0284501 28.364 275 154 7 338 579 392 656 1.33e-19 92.8
Msa0719880 MtrunA17_Chr3g0098531 27.234 235 136 4 374 574 48 281 2.60e-19 89.0
Msa0719880 MtrunA17_Chr5g0439061 28.082 292 160 6 329 572 437 726 2.45e-18 89.0
Msa0719880 MtrunA17_Chr3g0100921 40.650 123 72 1 437 558 2 124 7.78e-18 80.5
Msa0719880 MtrunA17_Chr2g0284541 27.673 318 174 7 300 570 322 630 1.02e-17 87.0
Msa0719880 MtrunA17_Chr5g0410441 43.333 90 48 2 330 418 1 88 1.43e-17 78.6
Msa0719880 MtrunA17_Chr5g0439051 34.591 159 102 2 418 575 50 207 1.01e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0719880 AT3G18670.1 35.334 583 275 19 70 580 35 587 4.58e-96 305
Msa0719880 AT3G18670.2 33.280 628 282 19 70 580 35 642 2.68e-93 300
Msa0719880 AT5G04690.3 30.345 580 306 13 81 576 66 631 1.93e-64 223
Msa0719880 AT5G04690.1 31.194 561 306 15 81 576 66 611 5.56e-63 218
Msa0719880 AT5G04690.2 29.798 594 305 14 81 576 66 645 2.79e-62 217
Msa0719880 AT5G04700.1 29.202 589 302 14 90 576 80 655 1.09e-59 210
Msa0719880 AT5G04680.3 28.253 584 308 16 90 576 67 636 3.19e-52 189
Msa0719880 AT5G04680.4 28.020 596 308 16 90 576 67 650 1.35e-50 185
Msa0719880 AT5G04680.2 28.518 533 262 15 151 576 7 527 6.44e-47 173
Msa0719880 AT5G04730.1 29.050 537 277 16 138 576 58 588 8.55e-47 174
Msa0719880 AT5G04680.1 27.083 624 307 21 90 576 67 679 8.31e-46 172
Msa0719880 AT5G35810.1 34.520 281 145 5 337 580 57 335 1.92e-43 159
Msa0719880 AT3G54065.1 39.535 172 68 2 404 539 8 179 9.13e-33 126
Msa0719880 AT5G04700.2 25.063 399 216 11 90 418 80 465 2.60e-22 100
Msa0719880 AT3G54070.1 28.324 173 111 6 66 232 24 189 5.28e-12 66.6
Msa0719880 AT5G35830.1 30.000 160 101 4 78 232 73 226 9.11e-12 66.6

Find 141 sgRNAs with CRISPR-Local

Find 519 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCACTTGGCAGGATATTT+AGG 0.127030 5_1:+15516691 Msa0719880:CDS
CCAAAGAATTCAAGAGTTTA+AGG 0.157617 5_1:+15516414 Msa0719880:CDS
TTCACTTGCTATGCTCTTAA+AGG 0.220345 5_1:+15517699 Msa0719880:CDS
CCTTAAACTCTTGAATTCTT+TGG 0.238324 5_1:-15516414 None:intergenic
TAAAGAAGCCTGGAATAAAT+TGG 0.241875 5_1:+15509276 Msa0719880:CDS
ATACATGATGCAACTGTAAA+TGG 0.242921 5_1:+15516619 Msa0719880:CDS
TTAGAACGCGCACCAATTTC+AGG 0.251761 5_1:-15509148 None:intergenic
TACATACCTTGCTCAATATC+TGG 0.253912 5_1:-15509331 None:intergenic
CTTCGCTATATTCGTGTTTC+CGG 0.254247 5_1:-15514477 None:intergenic
AATATATTCCACATCCTCTA+TGG 0.260429 5_1:+15514316 Msa0719880:CDS
GTGACCTCTATTCCTGAAAT+TGG 0.292763 5_1:+15509136 Msa0719880:CDS
TGCACTTGGCAGGATATTTA+GGG 0.308043 5_1:+15516692 Msa0719880:CDS
TTTCCAAGTGGTAGTGGATA+TGG 0.311953 5_1:+15514910 Msa0719880:CDS
ACTTCGGTCCTTCTCTTCAT+TGG 0.319322 5_1:+15517559 Msa0719880:CDS
AATTGTATCCATCAGGAATA+AGG 0.321064 5_1:+15516332 Msa0719880:intron
CTTCACGTTGCGGTAGTTGC+TGG 0.322177 5_1:+15514350 Msa0719880:CDS
CTAAGACTGAATATGAGATT+TGG 0.338368 5_1:+15509167 Msa0719880:CDS
CGAGGAAATTGTGAAGAAAT+TGG 0.372095 5_1:+15514376 Msa0719880:CDS
ATGCAAACTCGTTTATTAAG+AGG 0.378242 5_1:+15514282 Msa0719880:CDS
AACAGGGATTTCACCATCAT+TGG 0.379563 5_1:-15514558 None:intergenic
TGTTCTTCTTGCTGCTGCTA+AGG 0.379583 5_1:+15514577 Msa0719880:CDS
TGGTGAAAGCTGGGGAGAAA+TGG 0.379583 5_1:+15517356 Msa0719880:CDS
AGTTGCACCCAATTTATTCC+AGG 0.399506 5_1:-15509284 None:intergenic
CACAAGGAGCTGGTGAAAGC+TGG 0.403742 5_1:+15517346 Msa0719880:intron
GCTGCAGCTTTCACTGTCCC+TGG 0.408383 5_1:+15517439 Msa0719880:CDS
TTAGCAGCAGCAAGAAGAAC+AGG 0.410668 5_1:-15514575 None:intergenic
TAGAAACCACAGAGAAGAAA+AGG 0.416389 5_1:-15517657 None:intergenic
TTCCAAGTGGTAGTGGATAT+GGG 0.416844 5_1:+15514911 Msa0719880:CDS
AAATGCCGTGTAGACGCATT+TGG 0.419337 5_1:+15516658 Msa0719880:CDS
AATTCCATGTTGCACTTGGC+AGG 0.419647 5_1:+15516682 Msa0719880:CDS
ATCAGAACTTAGAGAGGCTT+CGG 0.421195 5_1:+15516438 Msa0719880:CDS
CTAATATGAGTAAGATTCTC+TGG 0.424630 5_1:-15509238 None:intergenic
TCACTTGCTATGCTCTTAAA+GGG 0.427681 5_1:+15517700 Msa0719880:CDS
CATTGGTCTTCATAGATAAC+AGG 0.427879 5_1:-15514541 None:intergenic
ACCTTAGTGGCAATGACTTA+AGG 0.429666 5_1:-15517615 None:intergenic
AGATGCAAAGAGAAATTCTA+TGG 0.430747 5_1:+15516755 Msa0719880:CDS
TTCACGTTGCGGTAGTTGCT+GGG 0.432176 5_1:+15514351 Msa0719880:CDS
TCTCTTTGCATCTGCATAGC+AGG 0.438079 5_1:-15516745 None:intergenic
GAGATTTGGAACAGGAAGAA+TGG 0.441267 5_1:+15509181 Msa0719880:CDS
CCACAAATCACACTTTGAAT+CGG 0.443086 5_1:+15514843 Msa0719880:CDS
TCTGTGTTTCCAAGTGGTAG+TGG 0.443413 5_1:+15514904 Msa0719880:CDS
CTGAATATGAGATTTGGAAC+AGG 0.444534 5_1:+15509173 Msa0719880:CDS
GTTCTTCTTGCTGCTGCTAA+GGG 0.445513 5_1:+15514578 Msa0719880:CDS
GACGGAACTAGAACGATAAC+AGG 0.451356 5_1:-15517766 None:intergenic
CGATTCAAAGTGTGATTTGT+GGG 0.456154 5_1:-15514842 None:intergenic
TATAGCGAAGTGTATGACTA+TGG 0.458675 5_1:+15514490 Msa0719880:CDS
TCCTTAAGTCATTGCCACTA+AGG 0.460081 5_1:+15517614 Msa0719880:CDS
TCTTGTGGGACATGGTCTGT+GGG 0.464135 5_1:+15509108 Msa0719880:CDS
GTTTATAGATGCAATGAGAA+AGG 0.467103 5_1:+15516504 Msa0719880:CDS
TTGTGGGCAAGAGGCATTTG+AGG 0.467341 5_1:-15514826 None:intergenic
CTTGTTAGAAACTATCTTGT+GGG 0.467922 5_1:+15509094 None:intergenic
ATGCGTGCCAATGCGTATAA+TGG 0.471182 5_1:-15514877 None:intergenic
TGTGCAGCGATTTATATTGA+AGG 0.474499 5_1:-15514232 None:intergenic
AACGGCTCGTTATGCTGAAA+AGG 0.475542 5_1:+15517588 Msa0719880:CDS
TTCATATTGCTAAAGAAGCC+TGG 0.477292 5_1:+15509266 Msa0719880:CDS
AAAGAAGCCTGGAATAAATT+GGG 0.481257 5_1:+15509277 Msa0719880:CDS
ACAAGGAGCTGGTGAAAGCT+GGG 0.481894 5_1:+15517347 Msa0719880:intron
GGTGAAAGCTGGGGAGAAAT+GGG 0.482292 5_1:+15517357 Msa0719880:CDS
AGCTGGTTCATTTACTCTTG+TGG 0.482801 5_1:+15517390 Msa0719880:CDS
AGATTTGGAACAGGAAGAAT+GGG 0.485550 5_1:+15509182 Msa0719880:CDS
TCAGCTCAGCAACAAGAGCT+AGG 0.486371 5_1:-15514454 None:intergenic
CATAGCAAGTGAAGCACAGA+AGG 0.486804 5_1:-15517689 None:intergenic
ATCTTGTGGGACATGGTCTG+TGG 0.486835 5_1:+15509107 Msa0719880:CDS
GTGAAGAAATTGGTGAAGGA+AGG 0.488215 5_1:+15514386 Msa0719880:CDS
TTGCATCTGCATAGCAGGAC+CGG 0.495069 5_1:-15516740 None:intergenic
TTTCAGCATAACGAGCCGTT+AGG 0.495553 5_1:-15517585 None:intergenic
ATATATTCCACATCCTCTAT+GGG 0.496055 5_1:+15514317 Msa0719880:CDS
TTGTCTTGATTGTTTCCACC+AGG 0.496117 5_1:-15517457 None:intergenic
TTGTACACCGTTGGAAGACC+TGG 0.502955 5_1:+15514631 Msa0719880:CDS
TTTATAGATGCAATGAGAAA+GGG 0.503030 5_1:+15516505 Msa0719880:CDS
ATCATGTATGAGTTCGAAAA+CGG 0.503307 5_1:-15516605 None:intergenic
TGCGATAATTATCATCGGCC+AGG 0.509460 5_1:-15514649 None:intergenic
TGGCAATTCCATGTTGCACT+TGG 0.511014 5_1:+15516678 Msa0719880:CDS
TCTTTACCGTTGTACACCGT+TGG 0.515694 5_1:+15514622 Msa0719880:CDS
TCTGATCTTGATCGTAGATC+CGG 0.515841 5_1:+15516721 Msa0719880:CDS
CGCACCAATTTCAGGAATAG+AGG 0.521001 5_1:-15509140 None:intergenic
GCTCTTGTTGCTGAGCTGAC+CGG 0.526277 5_1:+15514458 Msa0719880:CDS
CCGATTCAAAGTGTGATTTG+TGG 0.526820 5_1:-15514843 None:intergenic
TGCAAACTCGTTTATTAAGA+GGG 0.527286 5_1:+15514283 Msa0719880:CDS
TGTGATGTCGTGCAAGAACA+AGG 0.535047 5_1:-15517488 None:intergenic
GAGGCATTTGAGGAAATCGT+TGG 0.537554 5_1:-15514816 None:intergenic
GGTCCTCCCCATAGAGGATG+TGG 0.539677 5_1:-15514324 None:intergenic
AAGAGAAATTCTATGGTTCA+AGG 0.541072 5_1:+15516762 Msa0719880:CDS
TGTGCAACCATTATACGCAT+TGG 0.543058 5_1:+15514870 Msa0719880:CDS
AGTGCGAAAAGTAACCTTAG+TGG 0.548121 5_1:-15517628 None:intergenic
ATGTTGCAAGCAGCAAAGCA+TGG 0.555262 5_1:+15516472 Msa0719880:CDS
AACCCATATCCACTACCACT+TGG 0.557493 5_1:-15514913 None:intergenic
AAGTGTGATTTGTGGGCAAG+AGG 0.558162 5_1:-15514835 None:intergenic
TCTTGTTAGAAACTATCTTG+TGG 0.559427 5_1:+15509093 None:intergenic
AGAAACTATCTTGTGGGACA+TGG 0.562860 5_1:+15509100 None:intergenic
AGAAACCACAGAGAAGAAAA+GGG 0.563826 5_1:-15517656 None:intergenic
TGTTGCAAGCAGCAAAGCAT+GGG 0.564523 5_1:+15516473 Msa0719880:CDS
GCTTTAATTTGCAGGTGTGG+TGG 0.564757 5_1:+15514199 Msa0719880:intron
ACTTGAAAATCTCAAGGAAG+AGG 0.567742 5_1:-15517798 None:intergenic
TAAGGAATCAGAACTTAGAG+AGG 0.568613 5_1:+15516432 Msa0719880:CDS
GCCGATGATAATTATCGCAA+TGG 0.574637 5_1:+15514653 Msa0719880:CDS
TGAAGAAATTGGTGAAGGAA+GGG 0.574748 5_1:+15514387 Msa0719880:CDS
CAGCTCAGCAACAAGAGCTA+GGG 0.580236 5_1:-15514453 None:intergenic
AAATGGGCAAAAGATACAGC+TGG 0.580445 5_1:+15517373 Msa0719880:CDS
AGGAAGAGGCGCAACTGTGA+CGG 0.582572 5_1:-15517784 None:intergenic
TTATCTATGAAGACCAATGA+TGG 0.582929 5_1:+15514545 Msa0719880:CDS
ACCTTGCTCAATATCTGGAT+CGG 0.583770 5_1:-15509326 None:intergenic
TGCGGTAGTTGCTGGGCACG+AGG 0.589759 5_1:+15514358 Msa0719880:CDS
TAAGAAAATAACACGGTCAG+AGG 0.590331 5_1:+15514517 Msa0719880:CDS
TCTCTTCATTGGAATCCTAA+CGG 0.591072 5_1:+15517570 Msa0719880:CDS
CTGTAGACTTGAAAATCTCA+AGG 0.594097 5_1:-15517804 None:intergenic
GCAGCTTTCACTGTCCCTGG+TGG 0.601445 5_1:+15517442 Msa0719880:CDS
AGTATATTGAGAGCGGTGAG+TGG 0.609550 5_1:+15514255 Msa0719880:CDS
ACCATTGCGATAATTATCAT+CGG 0.609954 5_1:-15514654 None:intergenic
TAGAACGATAACAGGAACAC+TGG 0.611619 5_1:-15517758 None:intergenic
AACTACCGCAACGTGAAGAA+CGG 0.612033 5_1:-15514345 None:intergenic
AATTGCCAAATGCGTCTACA+CGG 0.612652 5_1:-15516663 None:intergenic
TTAGGATTCCAATGAAGAGA+AGG 0.614556 5_1:-15517567 None:intergenic
ATGCCTTCTGTGTTTCCAAG+TGG 0.615562 5_1:+15514898 Msa0719880:CDS
TGCAACTGTAAATGGACGGA+AGG 0.618113 5_1:+15516627 Msa0719880:CDS
CTTGTGGGACATGGTCTGTG+GGG 0.619674 5_1:+15509109 Msa0719880:CDS
CTACCACTTGGAAACACAGA+AGG 0.622603 5_1:-15514901 None:intergenic
AAGAACGGTCCTCCCCATAG+AGG 0.622685 5_1:-15514330 None:intergenic
GCCGATCCAGATATTGAGCA+AGG 0.624425 5_1:+15509325 Msa0719880:CDS
AATTGTGAAGAAATTGGTGA+AGG 0.625256 5_1:+15514382 Msa0719880:CDS
ATATCCTGCCAAGTGCAACA+TGG 0.627952 5_1:-15516686 None:intergenic
GGTGGAAACAATCAAGACAA+TGG 0.629811 5_1:+15517460 Msa0719880:CDS
ATGATGCAACTGTAAATGGA+CGG 0.638038 5_1:+15516623 Msa0719880:CDS
CATATCATTCAACTAACATG+TGG 0.643061 5_1:+15509214 Msa0719880:CDS
CAAGGAGCTGGTGAAAGCTG+GGG 0.651622 5_1:+15517348 Msa0719880:intron
TGTCTTGATTGTTTCCACCA+GGG 0.652150 5_1:-15517456 None:intergenic
GAGGACCGTTCTTCACGTTG+CGG 0.655029 5_1:+15514340 Msa0719880:CDS
GTGATGTCGTGCAAGAACAA+GGG 0.659099 5_1:-15517487 None:intergenic
ATTCCACATCCTCTATGGGG+AGG 0.660094 5_1:+15514321 Msa0719880:CDS
TAGCAGCAGCAAGAAGAACA+GGG 0.665135 5_1:-15514574 None:intergenic
TTGGAACAGGAAGAATGGGA+AGG 0.668429 5_1:+15509186 Msa0719880:CDS
TATTTCAAGAGCTACACGGT+AGG 0.669157 5_1:-15516377 None:intergenic
GTGAAAATGAAAGACAATCG+AGG 0.669964 5_1:+15514422 Msa0719880:CDS
TCATCGGCCAGGTCTTCCAA+CGG 0.671668 5_1:-15514638 None:intergenic
CTACGATCAAGATCAGAGGA+AGG 0.678354 5_1:-15516715 None:intergenic
CTGCACAAGTATATTGAGAG+CGG 0.680709 5_1:+15514248 Msa0719880:CDS
GGATCTACGATCAAGATCAG+AGG 0.680818 5_1:-15516719 None:intergenic
TCAATATTTCAAGAGCTACA+CGG 0.684421 5_1:-15516381 None:intergenic
GGTCTTCCAACGGTGTACAA+CGG 0.687225 5_1:-15514628 None:intergenic
TATATTCCACATCCTCTATG+GGG 0.688060 5_1:+15514318 Msa0719880:CDS
TGGTATATAAGAAAATAACA+CGG 0.754492 5_1:+15514510 Msa0719880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTTAAATACTTATAATATT+AGG + chr5_1:15514113-15514132 Msa0719880:intron 10.0%
!! CTTAAATACTTATAATATTA+GGG + chr5_1:15514114-15514133 Msa0719880:intron 10.0%
!! ACTTTATAAAAGAAATTTAA+AGG + chr5_1:15515160-15515179 Msa0719880:intron 10.0%
!!! ATCTTTGTATTTTAATACAA+AGG + chr5_1:15509889-15509908 Msa0719880:intron 15.0%
!! TACTTATATAAAATTATGCA+CGG + chr5_1:15510565-15510584 Msa0719880:intron 15.0%
!!! GTGAGTTTTTTTTTTTTTTT+TGG - chr5_1:15510627-15510646 None:intergenic 15.0%
!!! ATACAATTACATAATTTTAG+TGG - chr5_1:15510950-15510969 None:intergenic 15.0%
!!! TATATCTAATATAATTTGCA+TGG + chr5_1:15511101-15511120 Msa0719880:intron 15.0%
!!! AAGTTAAAAAGAATTTTTCT+GGG - chr5_1:15513011-15513030 None:intergenic 15.0%
!!! AAAGTTAAAAAGAATTTTTC+TGG - chr5_1:15513012-15513031 None:intergenic 15.0%
!!! ATTTTAACTTTTGAAATATG+TGG + chr5_1:15513034-15513053 Msa0719880:intron 15.0%
!!! TTTTAACTTTTGAAATATGT+GGG + chr5_1:15513035-15513054 Msa0719880:intron 15.0%
!! TTATTAAACAGTAAAAGTTT+AGG + chr5_1:15513967-15513986 Msa0719880:intron 15.0%
!!! ATTCAAATGTACTTATTTTT+GGG - chr5_1:15514050-15514069 None:intergenic 15.0%
!!! TATTCAAATGTACTTATTTT+TGG - chr5_1:15514051-15514070 None:intergenic 15.0%
!! ATTTAAAGGTGATTTATAAA+AGG + chr5_1:15515174-15515193 Msa0719880:intron 15.0%
!! TTTAAAGGTGATTTATAAAA+GGG + chr5_1:15515175-15515194 Msa0719880:intron 15.0%
!!! CAAAAGTTTGTATTTTATAA+AGG - chr5_1:15515217-15515236 None:intergenic 15.0%
!! TACTTCCAATAATATATTAA+AGG + chr5_1:15515293-15515312 Msa0719880:intron 15.0%
!! AAACTCCTTTAATATATTAT+TGG - chr5_1:15515301-15515320 None:intergenic 15.0%
!! TAATTAATTAATCACAAAGA+GGG - chr5_1:15516293-15516312 None:intergenic 15.0%
!! TTAATTAATTAATCACAAAG+AGG - chr5_1:15516294-15516313 None:intergenic 15.0%
!!! AAAAACTAAATTTGAAATTC+TGG + chr5_1:15517051-15517070 Msa0719880:intron 15.0%
!! TACACATTAATCTATTCTTT+GGG + chr5_1:15509366-15509385 Msa0719880:intron 20.0%
!! AACTATGTCTAATATGTATA+GGG - chr5_1:15509408-15509427 None:intergenic 20.0%
!! AAACTATGTCTAATATGTAT+AGG - chr5_1:15509409-15509428 None:intergenic 20.0%
!! TAGTTTCTAAATGTATTGAA+AGG + chr5_1:15509423-15509442 Msa0719880:intron 20.0%
!!! AATTCATATGTTTGATTTCA+TGG + chr5_1:15509581-15509600 Msa0719880:intron 20.0%
!!! ATTCATATGTTTGATTTCAT+GGG + chr5_1:15509582-15509601 Msa0719880:intron 20.0%
!!! ACACTTTATTTATTATCAAG+TGG - chr5_1:15509652-15509671 None:intergenic 20.0%
!!! CAATAAGGAAAGATTTTTAA+AGG + chr5_1:15509805-15509824 Msa0719880:intron 20.0%
!! ATGAAATATTGTTTATAGAG+TGG - chr5_1:15509920-15509939 None:intergenic 20.0%
!!! TAAAAGTTTATTTGATAGTG+TGG - chr5_1:15510329-15510348 None:intergenic 20.0%
!!! AATTGATAGGCATAATTTTT+TGG - chr5_1:15510449-15510468 None:intergenic 20.0%
!! AGTATCATCATATAATTGTA+CGG + chr5_1:15510480-15510499 Msa0719880:intron 20.0%
!!! TAGTTTAAAGTTAAACTGTT+TGG - chr5_1:15510510-15510529 None:intergenic 20.0%
!! ATCCAAAATATTGAGTTTAT+GGG - chr5_1:15513545-15513564 None:intergenic 20.0%
!!! AGGGAAAATAATTTTTGTAT+AGG + chr5_1:15511729-15511748 Msa0719880:intron 20.0%
!!! TTTTTCACTTATTCTAAGTA+TGG + chr5_1:15512147-15512166 Msa0719880:intron 20.0%
!! TCTTCATAATAAATTCATAC+AGG - chr5_1:15512300-15512319 None:intergenic 20.0%
!! TATTATGAAGAACAAGTTTA+TGG + chr5_1:15512309-15512328 Msa0719880:intron 20.0%
!!! TTTAACTTTTGAAATATGTG+GGG + chr5_1:15513036-15513055 Msa0719880:intron 20.0%
!!! AGGGAAAATAATTTTTGTAT+AGG - chr5_1:15511729-15511748 None:intergenic 20.0%
!! ATCCAAAATATTGAGTTTAT+GGG + chr5_1:15513545-15513564 Msa0719880:intron 20.0%
!!! TTACCTATTGTTGTTTAATT+AGG - chr5_1:15513895-15513914 None:intergenic 20.0%
!! TAATTAAACAACAATAGGTA+AGG + chr5_1:15513894-15513913 Msa0719880:intron 20.0%
!! AATTAAACAACAATAGGTAA+GGG + chr5_1:15513895-15513914 Msa0719880:intron 20.0%
!! TTATAACTAAGAACAATCAA+CGG + chr5_1:15514006-15514025 Msa0719880:intron 20.0%
!!! TTTGAATATTGTGATTTTAG+TGG + chr5_1:15514063-15514082 Msa0719880:intron 20.0%
!!! TTGAATATTGTGATTTTAGT+GGG + chr5_1:15514064-15514083 Msa0719880:intron 20.0%
!!! CATTTATTTTCCTTACTAAT+TGG - chr5_1:15514141-15514160 None:intergenic 20.0%
!! CAATTAGTAAGGAAAATAAA+TGG + chr5_1:15514139-15514158 Msa0719880:intron 20.0%
!! TGGTATATAAGAAAATAACA+CGG + chr5_1:15514510-15514529 Msa0719880:CDS 20.0%
!!! TTTTACGCATTTTTTTTTTC+AGG + chr5_1:15516125-15516144 Msa0719880:intron 20.0%
!!! TTGTTAATCCTTGTTTAAAT+CGG + chr5_1:15516215-15516234 Msa0719880:intron 20.0%
!! AATTAATTAATCACAAAGAG+GGG - chr5_1:15516292-15516311 None:intergenic 20.0%
!!! TCAAATTTAGTTTTTGAAGT+TGG - chr5_1:15517046-15517065 None:intergenic 20.0%
!! ATACATGACATTTAAATAAG+TGG + chr5_1:15517114-15517133 Msa0719880:intron 20.0%
! GTACACATTAATCTATTCTT+TGG + chr5_1:15509365-15509384 Msa0719880:intron 25.0%
!!! GATTTTGATCATCAATTAGT+CGG - chr5_1:15509491-15509510 None:intergenic 25.0%
!!! TAAGGAAAGATTTTTAAAGG+AGG + chr5_1:15509808-15509827 Msa0719880:intron 25.0%
!!! ACTTGTTGATTTATTCTCAT+TGG + chr5_1:15509849-15509868 Msa0719880:intron 25.0%
!!! CTTGTTGATTTATTCTCATT+GGG + chr5_1:15509850-15509869 Msa0719880:intron 25.0%
! ATTTAGTTGACAATGTTACT+TGG - chr5_1:15510129-15510148 None:intergenic 25.0%
! TTGATTAGAGAAAATAGCAA+AGG + chr5_1:15510264-15510283 Msa0719880:intron 25.0%
! CTTGATTGAAGAAAATTGAT+AGG - chr5_1:15510462-15510481 None:intergenic 25.0%
! TTATACACACACAAAAATCA+TGG + chr5_1:15510856-15510875 Msa0719880:intron 25.0%
! TTTATTTGCACTTCTGAATA+TGG - chr5_1:15510912-15510931 None:intergenic 25.0%
!!! AATCTTGAGGATTTTAACAA+TGG - chr5_1:15511347-15511366 None:intergenic 25.0%
! CTAATTAAACAACAATCTTG+AGG - chr5_1:15511360-15511379 None:intergenic 25.0%
!!! CTCAAGATTGTTGTTTAATT+AGG + chr5_1:15511358-15511377 Msa0719880:intron 25.0%
! ATAAAGTGAAACAAAGTGAA+AGG + chr5_1:15511443-15511462 Msa0719880:intron 25.0%
! AAACCTTCACAAATCAAATT+AGG + chr5_1:15511502-15511521 Msa0719880:intron 25.0%
! AACCTTCACAAATCAAATTA+GGG + chr5_1:15511503-15511522 Msa0719880:intron 25.0%
!!! CTTAAAGTGTTTTGTTTTGT+AGG - chr5_1:15513720-15513739 None:intergenic 25.0%
! TCAAATATATCTCAGATATC+AGG + chr5_1:15511674-15511693 Msa0719880:intron 25.0%
!! AACCCATAAACTCAATATTT+TGG + chr5_1:15511703-15511722 Msa0719880:intron 25.0%
! CATCCAAAATATTGAGTTTA+TGG - chr5_1:15513544-15513563 None:intergenic 25.0%
!!! TAAACTCAATATTTTGGATG+AGG + chr5_1:15511709-15511728 Msa0719880:intron 25.0%
!!! AAACTCAATATTTTGGATGA+GGG + chr5_1:15511710-15511729 Msa0719880:intron 25.0%
! AACAGTCATAGCATAAATAT+AGG + chr5_1:15511901-15511920 Msa0719880:intron 25.0%
! ACAGTCATAGCATAAATATA+GGG + chr5_1:15511902-15511921 Msa0719880:intron 25.0%
!!! CTTGTTGATTTATTCTCATT+AGG - chr5_1:15509850-15509869 None:intergenic 25.0%
!!! TTAACTTTTGAAATATGTGG+GGG + chr5_1:15513037-15513056 Msa0719880:intron 25.0%
! ACAGTCATAGCATAAATATA+GGG - chr5_1:15511902-15511921 None:intergenic 25.0%
! AACAGTCATAGCATAAATAT+AGG - chr5_1:15511901-15511920 None:intergenic 25.0%
!!! AAACTCAATATTTTGGATGA+GGG - chr5_1:15511710-15511729 None:intergenic 25.0%
!!! TAAACTCAATATTTTGGATG+AGG - chr5_1:15511709-15511728 None:intergenic 25.0%
! CATCCAAAATATTGAGTTTA+TGG + chr5_1:15513544-15513563 Msa0719880:intron 25.0%
!! AACCCATAAACTCAATATTT+TGG - chr5_1:15511703-15511722 None:intergenic 25.0%
! TCAAATATATCTCAGATATC+AGG - chr5_1:15511674-15511693 None:intergenic 25.0%
!!! CTTAAAGTGTTTTGTTTTGT+AGG + chr5_1:15513720-15513739 Msa0719880:intron 25.0%
! AACCTTCACAAATCAAATTA+GGG - chr5_1:15511503-15511522 None:intergenic 25.0%
! AAACCTTCACAAATCAAATT+AGG - chr5_1:15511502-15511521 None:intergenic 25.0%
! ATAAAGTGAAACAAAGTGAA+AGG - chr5_1:15511443-15511462 None:intergenic 25.0%
!!! TATTGTTGTTTAATTAGGTG+TGG - chr5_1:15513890-15513909 None:intergenic 25.0%
! ACACCTAATTAAACAACAAT+AGG + chr5_1:15513889-15513908 Msa0719880:intron 25.0%
! TAGTTATAACGCTTAAGATT+GGG - chr5_1:15513995-15514014 None:intergenic 25.0%
! TTAGTTATAACGCTTAAGAT+TGG - chr5_1:15513996-15514015 None:intergenic 25.0%
! TCGATTCAATATTGTATCTT+AGG + chr5_1:15514775-15514794 Msa0719880:intron 25.0%
! AATTTGAAAAGTAAGCGAAA+CGG - chr5_1:15514991-15515010 None:intergenic 25.0%
!!! TTTCGCTTACTTTTCAAATT+GGG + chr5_1:15514991-15515010 Msa0719880:intron 25.0%
! TGCAAACTTATAATGTTACA+CGG + chr5_1:15515050-15515069 Msa0719880:intron 25.0%
!! TTGTATTTTATAAAGGACAC+CGG - chr5_1:15515210-15515229 None:intergenic 25.0%
! AATGAATACTATATGTGTAG+TGG - chr5_1:15515263-15515282 None:intergenic 25.0%
! GAGTAAATAATGAATGAGAT+TGG + chr5_1:15515525-15515544 Msa0719880:intron 25.0%
! ATCAACACACATATATAACA+GGG - chr5_1:15516093-15516112 None:intergenic 25.0%
! TATCAACACACATATATAAC+AGG - chr5_1:15516094-15516113 None:intergenic 25.0%
!!! CTAATATACCGATTTAAACA+AGG - chr5_1:15516226-15516245 None:intergenic 25.0%
! GAATGATTGTACTTACAATA+AGG - chr5_1:15516267-15516286 None:intergenic 25.0%
!! TATATTTTCCTTATTCCTGA+TGG - chr5_1:15516343-15516362 None:intergenic 25.0%
! TTTATAGATGCAATGAGAAA+GGG + chr5_1:15516505-15516524 Msa0719880:CDS 25.0%
! GCCATTGATAAAAATAAAAG+AGG + chr5_1:15516547-15516566 Msa0719880:intron 25.0%
!!! GCCTCTTTTATTTTTATCAA+TGG - chr5_1:15516551-15516570 None:intergenic 25.0%
! AATGTCATGTATCTCAAAAT+TGG - chr5_1:15517106-15517125 None:intergenic 25.0%
! ATGAATAAGATAATAACGTG+TGG - chr5_1:15517172-15517191 None:intergenic 25.0%
!! CTTATTGTGAAATTTTGTGT+AGG + chr5_1:15517240-15517259 Msa0719880:intron 25.0%
CTAAGACTGAATATGAGATT+TGG + chr5_1:15509167-15509186 Msa0719880:CDS 30.0%
CATATCATTCAACTAACATG+TGG + chr5_1:15509214-15509233 Msa0719880:CDS 30.0%
CTAATATGAGTAAGATTCTC+TGG - chr5_1:15509241-15509260 None:intergenic 30.0%
TAAAGAAGCCTGGAATAAAT+TGG + chr5_1:15509276-15509295 Msa0719880:CDS 30.0%
AAAGAAGCCTGGAATAAATT+GGG + chr5_1:15509277-15509296 Msa0719880:CDS 30.0%
ATAAATAAAGTGTGTGAGTG+AGG + chr5_1:15509659-15509678 Msa0719880:intron 30.0%
GTTGTATGAGATGTTACAAA+TGG + chr5_1:15509740-15509759 Msa0719880:intron 30.0%
! TGAGATGTTACAAATGGTTT+TGG + chr5_1:15509746-15509765 Msa0719880:intron 30.0%
TCTGAAGAGAATACTATACA+AGG - chr5_1:15509957-15509976 None:intergenic 30.0%
TCACTTATGTTACCTAATGT+GGG - chr5_1:15510079-15510098 None:intergenic 30.0%
TTCACTTATGTTACCTAATG+TGG - chr5_1:15510080-15510099 None:intergenic 30.0%
GAATAAACTTCTCACATCAT+CGG + chr5_1:15510185-15510204 Msa0719880:intron 30.0%
ATTAGTCATGAGTTCAACTT+TGG + chr5_1:15510423-15510442 Msa0719880:intron 30.0%
TACATATATAAGTACACTCG+TGG + chr5_1:15510654-15510673 Msa0719880:intron 30.0%
ATCAAGACATATAGCATATG+TGG - chr5_1:15510817-15510836 None:intergenic 30.0%
ACATATGCTATATGTCTTGA+TGG + chr5_1:15510816-15510835 Msa0719880:intron 30.0%
TTTAAGCTGCTATGAATTGA+TGG - chr5_1:15510973-15510992 None:intergenic 30.0%
! AAGCTGGAAATTTTCAATAG+TGG - chr5_1:15511166-15511185 None:intergenic 30.0%
CAACTTAGAGCTACTTATAA+TGG - chr5_1:15511276-15511295 None:intergenic 30.0%
!! GATTGTTGTTTAATTAGGTG+TGG + chr5_1:15511363-15511382 Msa0719880:intron 30.0%
TGAAAGGAACTTATCGAATT+TGG + chr5_1:15511459-15511478 Msa0719880:intron 30.0%
!!! TTGATTTGTGAAGGTTTTGA+TGG - chr5_1:15513754-15513773 None:intergenic 30.0%
ACCTTCACAAATCAAATTAG+GGG + chr5_1:15511504-15511523 Msa0719880:intron 30.0%
AAAACACTTTAAGTAACCTG+AGG + chr5_1:15511540-15511559 Msa0719880:intron 30.0%
TTGTATAGGTATATGAAGTG+AGG + chr5_1:15511743-15511762 Msa0719880:intron 30.0%
TGTATAGGTATATGAAGTGA+GGG + chr5_1:15511744-15511763 Msa0719880:intron 30.0%
ATGCCAACATATTACATAGA+TGG + chr5_1:15511969-15511988 Msa0719880:intron 30.0%
TGCCAACATATTACATAGAT+GGG + chr5_1:15511970-15511989 Msa0719880:intron 30.0%
TACCCATCTATGTAATATGT+TGG - chr5_1:15513278-15513297 None:intergenic 30.0%
ATGAGTCATAGAAAGAATAG+AGG + chr5_1:15512025-15512044 Msa0719880:intron 30.0%
TCATAGAAAGAATAGAGGAA+TGG + chr5_1:15512030-15512049 Msa0719880:intron 30.0%
!! ATGGTTTGTTAGAATAGAAC+CGG + chr5_1:15512049-15512068 Msa0719880:intron 30.0%
TTCACTTATTCTAAGTATGG+TGG + chr5_1:15512150-15512169 Msa0719880:intron 30.0%
TCACTTATTCTAAGTATGGT+GGG + chr5_1:15512151-15512170 Msa0719880:intron 30.0%
ACAAATTTATTTCATCCCAG+GGG - chr5_1:15512435-15512454 None:intergenic 30.0%
CACAAATTTATTTCATCCCA+GGG - chr5_1:15512436-15512455 None:intergenic 30.0%
TCACAAATTTATTTCATCCC+AGG - chr5_1:15512437-15512456 None:intergenic 30.0%
! AAATAAATTTGTGAGCATCG+AGG + chr5_1:15512443-15512462 Msa0719880:intron 30.0%
!! AATAAATTTGTGAGCATCGA+GGG + chr5_1:15512444-15512463 Msa0719880:intron 30.0%
TATCACATGTCAATTTCGAT+TGG - chr5_1:15512484-15512503 None:intergenic 30.0%
AATCGAAATTGACATGTGAT+AGG + chr5_1:15512483-15512502 Msa0719880:intron 30.0%
AACGATTATCATATCCCTTA+TGG + chr5_1:15512672-15512691 Msa0719880:intron 30.0%
ACGATTATCATATCCCTTAT+GGG + chr5_1:15512673-15512692 Msa0719880:intron 30.0%
TAACATACAACAAGTGTCTT+GGG + chr5_1:15512880-15512899 Msa0719880:intron 30.0%
!! GTGTTAAGTCTTATTAGTCT+AGG + chr5_1:15512932-15512951 Msa0719880:intron 30.0%
!! TAAGTCTTATTAGTCTAGGA+CGG + chr5_1:15512936-15512955 Msa0719880:intron 30.0%
!! ATGGTTTGTTAGAATAGAAC+CGG - chr5_1:15512049-15512068 None:intergenic 30.0%
TCATAGAAAGAATAGAGGAA+TGG - chr5_1:15512030-15512049 None:intergenic 30.0%
ATGAGTCATAGAAAGAATAG+AGG - chr5_1:15512025-15512044 None:intergenic 30.0%
TACCCATCTATGTAATATGT+TGG + chr5_1:15513278-15513297 Msa0719880:intron 30.0%
TGCCAACATATTACATAGAT+GGG - chr5_1:15511970-15511989 None:intergenic 30.0%
ATGCCAACATATTACATAGA+TGG - chr5_1:15511969-15511988 None:intergenic 30.0%
TGTATAGGTATATGAAGTGA+GGG - chr5_1:15511744-15511763 None:intergenic 30.0%
TTGTATAGGTATATGAAGTG+AGG - chr5_1:15511743-15511762 None:intergenic 30.0%
AAAACACTTTAAGTAACCTG+AGG - chr5_1:15511540-15511559 None:intergenic 30.0%
ACCTTCACAAATCAAATTAG+GGG - chr5_1:15511504-15511523 None:intergenic 30.0%
!!! TTGATTTGTGAAGGTTTTGA+TGG + chr5_1:15513754-15513773 Msa0719880:intron 30.0%
TGAAAGGAACTTATCGAATT+TGG - chr5_1:15511459-15511478 None:intergenic 30.0%
AGTTATAACGCTTAAGATTG+GGG - chr5_1:15513994-15514013 None:intergenic 30.0%
ATATTAGGGTCCAATTAGTA+AGG + chr5_1:15514128-15514147 Msa0719880:intron 30.0%
!! ACATACATGCTTTAATTTGC+AGG + chr5_1:15514191-15514210 Msa0719880:intron 30.0%
ATGCAAACTCGTTTATTAAG+AGG + chr5_1:15514282-15514301 Msa0719880:CDS 30.0%
TGCAAACTCGTTTATTAAGA+GGG + chr5_1:15514283-15514302 Msa0719880:CDS 30.0%
AATATATTCCACATCCTCTA+TGG + chr5_1:15514316-15514335 Msa0719880:CDS 30.0%
ATATATTCCACATCCTCTAT+GGG + chr5_1:15514317-15514336 Msa0719880:CDS 30.0%
AATTGTGAAGAAATTGGTGA+AGG + chr5_1:15514382-15514401 Msa0719880:CDS 30.0%
TTATCTATGAAGACCAATGA+TGG + chr5_1:15514545-15514564 Msa0719880:CDS 30.0%
ACCATTGCGATAATTATCAT+CGG - chr5_1:15514657-15514676 None:intergenic 30.0%
TGTATCACTGCAGAAATATT+TGG + chr5_1:15514695-15514714 Msa0719880:intron 30.0%
ATCGACATCAAACACTAATA+TGG - chr5_1:15514760-15514779 None:intergenic 30.0%
TCAATATTGTATCTTAGGTG+TGG + chr5_1:15514780-15514799 Msa0719880:intron 30.0%
!! GTTTCGCTTACTTTTCAAAT+TGG + chr5_1:15514990-15515009 Msa0719880:intron 30.0%
TTGGGTCATCTTAAAATTCT+TGG + chr5_1:15515009-15515028 Msa0719880:intron 30.0%
TATAAAAGGGAAATGCTAAC+CGG + chr5_1:15515188-15515207 Msa0719880:intron 30.0%
GGAGATGTTAAATTAAGTGT+TGG - chr5_1:15515242-15515261 None:intergenic 30.0%
! AGAGTTTTACATGATCTGTT+TGG + chr5_1:15515334-15515353 Msa0719880:intron 30.0%
TACATGATCTGTTTGGAAAT+TGG + chr5_1:15515341-15515360 Msa0719880:intron 30.0%
! AGTGAAGTTTGATGAGTTTT+TGG - chr5_1:15515414-15515433 None:intergenic 30.0%
AGACCAACTTTACAAAATTG+AGG + chr5_1:15515457-15515476 Msa0719880:intron 30.0%
! ACTCCTCAATTTTGTAAAGT+TGG - chr5_1:15515463-15515482 None:intergenic 30.0%
!! GAGTATCGTTCCAATTTTAT+CGG + chr5_1:15515479-15515498 Msa0719880:intron 30.0%
GGTAATCTCAAAACTAAAAG+CGG - chr5_1:15515634-15515653 None:intergenic 30.0%
!! AGAGAAGTGCATGAATTTTA+CGG + chr5_1:15515658-15515677 Msa0719880:intron 30.0%
!!! TTTGTGTTGTTTTTCCTCTT+TGG - chr5_1:15515710-15515729 None:intergenic 30.0%
!! AAGCTCTAGAAAGAAGAATT+AGG - chr5_1:15515763-15515782 None:intergenic 30.0%
! GTTTTTCTACAATATGCGAA+TGG + chr5_1:15515802-15515821 Msa0719880:intron 30.0%
CTGAGGATTATTAATCTTCT+CGG + chr5_1:15515830-15515849 Msa0719880:intron 30.0%
! TCACATGTCATTTCAGAATT+CGG + chr5_1:15516166-15516185 Msa0719880:intron 30.0%
! TTATTCCTGATGGATACAAT+TGG - chr5_1:15516333-15516352 None:intergenic 30.0%
AATTGTATCCATCAGGAATA+AGG + chr5_1:15516332-15516351 Msa0719880:intron 30.0%
TCAATATTTCAAGAGCTACA+CGG - chr5_1:15516384-15516403 None:intergenic 30.0%
CCTTAAACTCTTGAATTCTT+TGG - chr5_1:15516417-15516436 None:intergenic 30.0%
CCAAAGAATTCAAGAGTTTA+AGG + chr5_1:15516414-15516433 Msa0719880:CDS 30.0%
GTTTATAGATGCAATGAGAA+AGG + chr5_1:15516504-15516523 Msa0719880:CDS 30.0%
ATCATGTATGAGTTCGAAAA+CGG - chr5_1:15516608-15516627 None:intergenic 30.0%
ATACATGATGCAACTGTAAA+TGG + chr5_1:15516619-15516638 Msa0719880:CDS 30.0%
AGATGCAAAGAGAAATTCTA+TGG + chr5_1:15516755-15516774 Msa0719880:CDS 30.0%
AAGAGAAATTCTATGGTTCA+AGG + chr5_1:15516762-15516781 Msa0719880:CDS 30.0%
GGCTAATCATTAATCATTTG+TGG - chr5_1:15517151-15517170 None:intergenic 30.0%
TTTCACAATAAGTTATAGCG+CGG - chr5_1:15517232-15517251 None:intergenic 30.0%
!!! TTTTTTGCTTCCTTACACTT+GGG - chr5_1:15517286-15517305 None:intergenic 30.0%
!!! ATTTTTTGCTTCCTTACACT+TGG - chr5_1:15517287-15517306 None:intergenic 30.0%
! TCTTTTCACTTCTTCAACTT+CGG + chr5_1:15517543-15517562 Msa0719880:CDS 30.0%
! CTGAATATGAGATTTGGAAC+AGG + chr5_1:15509173-15509192 Msa0719880:CDS 35.0%
! AGATTTGGAACAGGAAGAAT+GGG + chr5_1:15509182-15509201 Msa0719880:CDS 35.0%
TTCATATTGCTAAAGAAGCC+TGG + chr5_1:15509266-15509285 Msa0719880:CDS 35.0%
TACATACCTTGCTCAATATC+TGG - chr5_1:15509334-15509353 None:intergenic 35.0%
! TAAGTGTCTTTTGTGAGTCA+TGG + chr5_1:15509459-15509478 Msa0719880:intron 35.0%
ACTTATGTTACCTAATGTGG+GGG - chr5_1:15510077-15510096 None:intergenic 35.0%
CACTTATGTTACCTAATGTG+GGG - chr5_1:15510078-15510097 None:intergenic 35.0%
GCATGCTACAGTTATTTATG+TGG - chr5_1:15510748-15510767 None:intergenic 35.0%
! TTCAGAAGTGCAAATAAACC+TGG + chr5_1:15510914-15510933 Msa0719880:intron 35.0%
GGCAAAATGTTTATCAAAGC+TGG - chr5_1:15511182-15511201 None:intergenic 35.0%
! AGAGCTACTTATAATGGAGA+TGG - chr5_1:15511270-15511289 None:intergenic 35.0%
TGGCGATTGATCTAGAAATT+AGG + chr5_1:15511306-15511325 Msa0719880:intron 35.0%
GGCGATTGATCTAGAAATTA+GGG + chr5_1:15511307-15511326 Msa0719880:intron 35.0%
!! TCCCCTAATTTGATTTGTGA+AGG - chr5_1:15513745-15513764 None:intergenic 35.0%
CCACGTTTATTATTGTGCTA+CGG - chr5_1:15513395-15513414 None:intergenic 35.0%
CGTAGCACAATAATAAACGT+GGG + chr5_1:15511856-15511875 Msa0719880:intron 35.0%
!! CTGAAGTTATTGCTTTTGAC+CGG - chr5_1:15513182-15513201 None:intergenic 35.0%
CACTTATTCTAAGTATGGTG+GGG + chr5_1:15512152-15512171 Msa0719880:intron 35.0%
CATAGCTAAGAGTTATCTTG+AGG - chr5_1:15512199-15512218 None:intergenic 35.0%
!! ATAAATTTGTGAGCATCGAG+GGG + chr5_1:15512445-15512464 Msa0719880:intron 35.0%
TAATCCTAGTCTCTTTCCTA+TGG + chr5_1:15512592-15512611 Msa0719880:intron 35.0%
CACTTACTCAAATACACCAT+AGG - chr5_1:15512611-15512630 None:intergenic 35.0%
CTAGACATTGCAATATTGAG+AGG + chr5_1:15512631-15512650 Msa0719880:intron 35.0%
ATTATCATATCCCTTATGGG+TGG + chr5_1:15512676-15512695 Msa0719880:intron 35.0%
ACTTGATGAAATCGCCTATA+TGG + chr5_1:15512718-15512737 Msa0719880:intron 35.0%
CTTGATGAAATCGCCTATAT+GGG + chr5_1:15512719-15512738 Msa0719880:intron 35.0%
!! AGACACTTGTTGTATGTTAG+AGG - chr5_1:15512879-15512898 None:intergenic 35.0%
CTAACATACAACAAGTGTCT+TGG + chr5_1:15512879-15512898 Msa0719880:intron 35.0%
! TGAATTGGTTTAGCAAGCTA+TGG - chr5_1:15512908-15512927 None:intergenic 35.0%
AGACTTAACACACAGTGAAT+TGG - chr5_1:15512923-15512942 None:intergenic 35.0%
!! AAGTCTTATTAGTCTAGGAC+GGG + chr5_1:15512937-15512956 Msa0719880:intron 35.0%
ACATCGTAGATGTAATGCAT+CGG - chr5_1:15512985-15513004 None:intergenic 35.0%
!! CTGAAGTTATTGCTTTTGAC+CGG + chr5_1:15513182-15513201 Msa0719880:intron 35.0%
CGTAGCACAATAATAAACGT+GGG - chr5_1:15511856-15511875 None:intergenic 35.0%
CCACGTTTATTATTGTGCTA+CGG + chr5_1:15513395-15513414 Msa0719880:intron 35.0%
!! TCCCCTAATTTGATTTGTGA+AGG + chr5_1:15513745-15513764 Msa0719880:intron 35.0%
TGTGCAGCGATTTATATTGA+AGG - chr5_1:15514235-15514254 None:intergenic 35.0%
TATATTCCACATCCTCTATG+GGG + chr5_1:15514318-15514337 Msa0719880:CDS 35.0%
CGAGGAAATTGTGAAGAAAT+TGG + chr5_1:15514376-15514395 Msa0719880:CDS 35.0%
TGAAGAAATTGGTGAAGGAA+GGG + chr5_1:15514387-15514406 Msa0719880:CDS 35.0%
GTGAAAATGAAAGACAATCG+AGG + chr5_1:15514422-15514441 Msa0719880:CDS 35.0%
TATAGCGAAGTGTATGACTA+TGG + chr5_1:15514490-15514509 Msa0719880:CDS 35.0%
TAAGAAAATAACACGGTCAG+AGG + chr5_1:15514517-15514536 Msa0719880:CDS 35.0%
!! CATTGGTCTTCATAGATAAC+AGG - chr5_1:15514544-15514563 None:intergenic 35.0%
! CGATTCAAAGTGTGATTTGT+GGG - chr5_1:15514845-15514864 None:intergenic 35.0%
CCACAAATCACACTTTGAAT+CGG + chr5_1:15514843-15514862 Msa0719880:CDS 35.0%
AATTCATGCACTTCTCTTTC+AGG - chr5_1:15515655-15515674 None:intergenic 35.0%
!! GAGAAGTGCATGAATTTTAC+GGG + chr5_1:15515659-15515678 Msa0719880:intron 35.0%
TCTTGCAAATATTGCCAAAG+AGG + chr5_1:15515693-15515712 Msa0719880:intron 35.0%
CAACACAAAGCTTCTTTCAT+AGG + chr5_1:15515721-15515740 Msa0719880:intron 35.0%
CAAAGCTTCTTTCATAGGTA+TGG + chr5_1:15515726-15515745 Msa0719880:intron 35.0%
!! ATCTTCTCGGTTGTTTCTTT+AGG + chr5_1:15515843-15515862 Msa0719880:intron 35.0%
! GTTTCTTTAGGAAGGTTATG+TGG + chr5_1:15515855-15515874 Msa0719880:intron 35.0%
AAGATCACAGATCACAACAA+TGG - chr5_1:15515995-15516014 None:intergenic 35.0%
TCGGTACTATTAAAGTTCTC+TGG + chr5_1:15516185-15516204 Msa0719880:intron 35.0%
TAATTAATCACAAAGAGGGG+AGG - chr5_1:15516289-15516308 None:intergenic 35.0%
TAAGGAATCAGAACTTAGAG+AGG + chr5_1:15516432-15516451 Msa0719880:CDS 35.0%
! TTTTATCAATGGCCCATAAG+AGG - chr5_1:15516540-15516559 None:intergenic 35.0%
ATGATGCAACTGTAAATGGA+CGG + chr5_1:15516623-15516642 Msa0719880:CDS 35.0%
GCTTATATGTTGGAACAAAG+AGG + chr5_1:15516841-15516860 Msa0719880:intron 35.0%
! GAGAAGAGATTAGAGAGTTT+TGG + chr5_1:15516902-15516921 Msa0719880:intron 35.0%
GTTGGTTGTGAAGTTGTTAT+AGG - chr5_1:15517028-15517047 None:intergenic 35.0%
TATAGCGCGGTTAAAATTCA+TGG - chr5_1:15517219-15517238 None:intergenic 35.0%
! TTTTTGCTTCCTTACACTTG+GGG - chr5_1:15517285-15517304 None:intergenic 35.0%
TTAGGATTCCAATGAAGAGA+AGG - chr5_1:15517570-15517589 None:intergenic 35.0%
TCTCTTCATTGGAATCCTAA+CGG + chr5_1:15517570-15517589 Msa0719880:CDS 35.0%
AGAAACCACAGAGAAGAAAA+GGG - chr5_1:15517659-15517678 None:intergenic 35.0%
TAGAAACCACAGAGAAGAAA+AGG - chr5_1:15517660-15517679 None:intergenic 35.0%
!! TTCACTTGCTATGCTCTTAA+AGG + chr5_1:15517699-15517718 Msa0719880:CDS 35.0%
!! TCACTTGCTATGCTCTTAAA+GGG + chr5_1:15517700-15517719 Msa0719880:CDS 35.0%
ACTTGAAAATCTCAAGGAAG+AGG - chr5_1:15517801-15517820 None:intergenic 35.0%
CTGTAGACTTGAAAATCTCA+AGG - chr5_1:15517807-15517826 None:intergenic 35.0%
GTGACCTCTATTCCTGAAAT+TGG + chr5_1:15509136-15509155 Msa0719880:CDS 40.0%
! GAGATTTGGAACAGGAAGAA+TGG + chr5_1:15509181-15509200 Msa0719880:CDS 40.0%
AGTTGCACCCAATTTATTCC+AGG - chr5_1:15509287-15509306 None:intergenic 40.0%
ACCTTGCTCAATATCTGGAT+CGG - chr5_1:15509329-15509348 None:intergenic 40.0%
!! AAAAGAATCGTGTTGACTCG+TGG + chr5_1:15509695-15509714 Msa0719880:intron 40.0%
!! AAAGAATCGTGTTGACTCGT+GGG + chr5_1:15509696-15509715 Msa0719880:intron 40.0%
AAGCGACAACATCTCTACAA+AGG + chr5_1:15509995-15510014 Msa0719880:intron 40.0%
TCATGAGAGTAATCTAGCAG+TGG - chr5_1:15510233-15510252 None:intergenic 40.0%
ATGGCACATGCTTCATTTGA+TGG - chr5_1:15510893-15510912 None:intergenic 40.0%
!! TTTAGTGGATTTCTAGTGCC+AGG - chr5_1:15510935-15510954 None:intergenic 40.0%
! GGAAATTTTCAATAGTGGCG+TGG - chr5_1:15511161-15511180 None:intergenic 40.0%
TAGACACGTTGTTGGTATCT+CGG - chr5_1:15511221-15511240 None:intergenic 40.0%
TTATGTCGTAGACACGTTGT+TGG - chr5_1:15511229-15511248 None:intergenic 40.0%
AACAACGTGTCTACGACATA+AGG + chr5_1:15511228-15511247 Msa0719880:intron 40.0%
CTCTAAGTTGTTACGAATCG+TGG + chr5_1:15511286-15511305 Msa0719880:intron 40.0%
AATAACTGTTGTATCCTGGG+AGG - chr5_1:15511617-15511636 None:intergenic 40.0%
GGGAATAACTGTTGTATCCT+GGG - chr5_1:15511620-15511639 None:intergenic 40.0%
TCCCCGTTATGATTCATAAC+CGG + chr5_1:15511636-15511655 Msa0719880:intron 40.0%
TCCGGTTATGAATCATAACG+GGG - chr5_1:15513613-15513632 None:intergenic 40.0%
CTCCGGTTATGAATCATAAC+GGG - chr5_1:15513612-15513631 None:intergenic 40.0%
CCTCCGGTTATGAATCATAA+CGG - chr5_1:15513611-15513630 None:intergenic 40.0%
CCGTAGCACAATAATAAACG+TGG + chr5_1:15511855-15511874 Msa0719880:intron 40.0%
TTATCTTGAGGTCGAGAGTT+CGG - chr5_1:15512187-15512206 None:intergenic 40.0%
TACGTACTAATAAAGCCCCT+GGG + chr5_1:15512417-15512436 Msa0719880:intron 40.0%
GATCTCCAATCACAAAGGTT+GGG - chr5_1:15512511-15512530 None:intergenic 40.0%
CCACATTGAACCTTCTTCAT+GGG - chr5_1:15512533-15512552 None:intergenic 40.0%
ACCACATTGAACCTTCTTCA+TGG - chr5_1:15512534-15512553 None:intergenic 40.0%
TACACCATAGGAAAGAGACT+AGG - chr5_1:15512599-15512618 None:intergenic 40.0%
AAGTCATACACCACCCATAA+GGG - chr5_1:15512689-15512708 None:intergenic 40.0%
GTAGATGTAATGCATCGGAA+CGG - chr5_1:15512980-15512999 None:intergenic 40.0%
CCGTAGCACAATAATAAACG+TGG - chr5_1:15511855-15511874 None:intergenic 40.0%
CCTCCGGTTATGAATCATAA+CGG + chr5_1:15513611-15513630 Msa0719880:intron 40.0%
CTCCGGTTATGAATCATAAC+GGG + chr5_1:15513612-15513631 Msa0719880:intron 40.0%
TCCGGTTATGAATCATAACG+GGG + chr5_1:15513613-15513632 Msa0719880:intron 40.0%
TCCCCGTTATGATTCATAAC+CGG - chr5_1:15511636-15511655 None:intergenic 40.0%
TAGGTAAGGGAGAAGCAATA+AGG + chr5_1:15513908-15513927 Msa0719880:intron 40.0%
ACTAAGAACAATCAACGGCA+AGG + chr5_1:15514011-15514030 Msa0719880:intron 40.0%
!! CATGCTTTAATTTGCAGGTG+TGG + chr5_1:15514196-15514215 Msa0719880:intron 40.0%
CTGCACAAGTATATTGAGAG+CGG + chr5_1:15514248-15514267 Msa0719880:CDS 40.0%
GTGAAGAAATTGGTGAAGGA+AGG + chr5_1:15514386-15514405 Msa0719880:CDS 40.0%
CTTCGCTATATTCGTGTTTC+CGG - chr5_1:15514480-15514499 None:intergenic 40.0%
AACAGGGATTTCACCATCAT+TGG - chr5_1:15514561-15514580 None:intergenic 40.0%
GCCGATGATAATTATCGCAA+TGG + chr5_1:15514653-15514672 Msa0719880:CDS 40.0%
! CTGCAGAAATATTTGGTTCG+TGG + chr5_1:15514702-15514721 Msa0719880:intron 40.0%
CCGATTCAAAGTGTGATTTG+TGG - chr5_1:15514846-15514865 None:intergenic 40.0%
TGTGCAACCATTATACGCAT+TGG + chr5_1:15514870-15514889 Msa0719880:CDS 40.0%
!! TTTCCAAGTGGTAGTGGATA+TGG + chr5_1:15514910-15514929 Msa0719880:CDS 40.0%
!! TTCCAAGTGGTAGTGGATAT+GGG + chr5_1:15514911-15514930 Msa0719880:CDS 40.0%
TTACTCCTCAATTGTCCCTT+CGG - chr5_1:15515511-15515530 None:intergenic 40.0%
!! AAGCGGAAGTAGATTAGTCT+TGG - chr5_1:15515617-15515636 None:intergenic 40.0%
!! TCTCGGTTGTTTCTTTAGGA+AGG + chr5_1:15515847-15515866 Msa0719880:intron 40.0%
! CTTTAGGAAGGTTATGTGGA+CGG + chr5_1:15515859-15515878 Msa0719880:intron 40.0%
TTTATCGCCAGTAAAGCAGT+TGG + chr5_1:15515890-15515909 Msa0719880:intron 40.0%
TTATCGCCAGTAAAGCAGTT+GGG + chr5_1:15515891-15515910 Msa0719880:intron 40.0%
AACTTACCCAACTGCTTTAC+TGG - chr5_1:15515900-15515919 None:intergenic 40.0%
TCTGGATTACAAGACGTATC+CGG - chr5_1:15516043-15516062 None:intergenic 40.0%
TCTTGTAATCCAGACCCTAA+GGG + chr5_1:15516049-15516068 Msa0719880:intron 40.0%
GCTTTGTATTCACACCCTTA+GGG - chr5_1:15516066-15516085 None:intergenic 40.0%
CACACATATATAACAGGGAC+TGG - chr5_1:15516088-15516107 None:intergenic 40.0%
! TCCTGATGGATACAATTGGA+GGG - chr5_1:15516329-15516348 None:intergenic 40.0%
! TTCCTGATGGATACAATTGG+AGG - chr5_1:15516330-15516349 None:intergenic 40.0%
TATTTCAAGAGCTACACGGT+AGG - chr5_1:15516380-15516399 None:intergenic 40.0%
ATCAGAACTTAGAGAGGCTT+CGG + chr5_1:15516438-15516457 Msa0719880:CDS 40.0%
! GTTCGAAAACGGCTTTTCTA+CGG - chr5_1:15516597-15516616 None:intergenic 40.0%
AATTGCCAAATGCGTCTACA+CGG - chr5_1:15516666-15516685 None:intergenic 40.0%
TTGCACTTGGCAGGATATTT+AGG + chr5_1:15516691-15516710 Msa0719880:CDS 40.0%
TGCACTTGGCAGGATATTTA+GGG + chr5_1:15516692-15516711 Msa0719880:CDS 40.0%
TCTGATCTTGATCGTAGATC+CGG + chr5_1:15516721-15516740 Msa0719880:CDS 40.0%
CATGCATGCAGCTTATATGT+TGG + chr5_1:15516831-15516850 Msa0719880:intron 40.0%
! GTGAAATTTTGTGTAGGCAG+TGG + chr5_1:15517246-15517265 Msa0719880:intron 40.0%
! AAATTTTGTGTAGGCAGTGG+AGG + chr5_1:15517249-15517268 Msa0719880:intron 40.0%
CTTTCTGTAAATAGCTCACG+AGG - chr5_1:15517325-15517344 None:intergenic 40.0%
GCTATTTACAGAAAGCCACA+AGG + chr5_1:15517330-15517349 Msa0719880:intron 40.0%
AAATGGGCAAAAGATACAGC+TGG + chr5_1:15517373-15517392 Msa0719880:CDS 40.0%
! AGCTGGTTCATTTACTCTTG+TGG + chr5_1:15517390-15517409 Msa0719880:CDS 40.0%
TGTCTTGATTGTTTCCACCA+GGG - chr5_1:15517459-15517478 None:intergenic 40.0%
TTGTCTTGATTGTTTCCACC+AGG - chr5_1:15517460-15517479 None:intergenic 40.0%
GGTGGAAACAATCAAGACAA+TGG + chr5_1:15517460-15517479 Msa0719880:CDS 40.0%
TCCTTAAGTCATTGCCACTA+AGG + chr5_1:15517614-15517633 Msa0719880:CDS 40.0%
ACCTTAGTGGCAATGACTTA+AGG - chr5_1:15517618-15517637 None:intergenic 40.0%
AGTGCGAAAAGTAACCTTAG+TGG - chr5_1:15517631-15517650 None:intergenic 40.0%
TAGAACGATAACAGGAACAC+TGG - chr5_1:15517761-15517780 None:intergenic 40.0%
CGCACCAATTTCAGGAATAG+AGG - chr5_1:15509143-15509162 None:intergenic 45.0%
TTAGAACGCGCACCAATTTC+AGG - chr5_1:15509151-15509170 None:intergenic 45.0%
TTGGAACAGGAAGAATGGGA+AGG + chr5_1:15509186-15509205 Msa0719880:CDS 45.0%
!! AAGAATCGTGTTGACTCGTG+GGG + chr5_1:15509697-15509716 Msa0719880:intron 45.0%
TTAGATATACGACGTCACGC+AGG - chr5_1:15511090-15511109 None:intergenic 45.0%
CTCGGAGAATGAGAAGTGAA+TGG - chr5_1:15511203-15511222 None:intergenic 45.0%
TGACATAGTCACTGTCCTTG+AGG + chr5_1:15511565-15511584 Msa0719880:intron 45.0%
TGAGGCGGATAAAATCCTCA+AGG - chr5_1:15513670-15513689 None:intergenic 45.0%
GGGGAATAACTGTTGTATCC+TGG - chr5_1:15511621-15511640 None:intergenic 45.0%
CCGTTATGATTCATAACCGG+AGG + chr5_1:15511639-15511658 Msa0719880:intron 45.0%
! TTGAGTTGTTCTGTCACCTC+CGG - chr5_1:15511658-15511677 None:intergenic 45.0%
GTACGTACTAATAAAGCCCC+TGG + chr5_1:15512416-15512435 Msa0719880:intron 45.0%
AGGAACCCAACCTTTGTGAT+TGG + chr5_1:15512503-15512522 Msa0719880:intron 45.0%
GGATCTCCAATCACAAAGGT+TGG - chr5_1:15512512-15512531 None:intergenic 45.0%
CATGGGATCTCCAATCACAA+AGG - chr5_1:15512516-15512535 None:intergenic 45.0%
GATTGGAGATCCCATGAAGA+AGG + chr5_1:15512520-15512539 Msa0719880:intron 45.0%
CCCATGAAGAAGGTTCAATG+TGG + chr5_1:15512530-15512549 Msa0719880:intron 45.0%
CAAGTCATACACCACCCATA+AGG - chr5_1:15512690-15512709 None:intergenic 45.0%
TTGCCAAGATCTCATGCAAG+CGG - chr5_1:15512757-15512776 None:intergenic 45.0%
! CTAGAGCACTCATGAATACC+AGG + chr5_1:15512782-15512801 Msa0719880:intron 45.0%
!! CCACAATTCTTGCTGTTACG+CGG - chr5_1:15512834-15512853 None:intergenic 45.0%
CGCGTAACAGCAAGAATTGT+GGG + chr5_1:15512832-15512851 Msa0719880:intron 45.0%
GCGTAACAGCAAGAATTGTG+GGG + chr5_1:15512833-15512852 Msa0719880:intron 45.0%
CGTAACAGCAAGAATTGTGG+GGG + chr5_1:15512834-15512853 Msa0719880:intron 45.0%
GTAACAGCAAGAATTGTGGG+GGG + chr5_1:15512835-15512854 Msa0719880:intron 45.0%
CCGTTATGATTCATAACCGG+AGG - chr5_1:15511639-15511658 None:intergenic 45.0%
GGGAAGAACTGTTGTATCCT+GGG + chr5_1:15513633-15513652 Msa0719880:intron 45.0%
AAGAACTGTTGTATCCTGGG+AGG + chr5_1:15513636-15513655 Msa0719880:intron 45.0%
TGAGGCGGATAAAATCCTCA+AGG + chr5_1:15513670-15513689 Msa0719880:intron 45.0%
TGACATAGTCACTGTCCTTG+AGG - chr5_1:15511565-15511584 None:intergenic 45.0%
AAGAACAATCAACGGCAAGG+TGG + chr5_1:15514014-15514033 Msa0719880:intron 45.0%
!! GCTTTAATTTGCAGGTGTGG+TGG + chr5_1:15514199-15514218 Msa0719880:intron 45.0%
AGTATATTGAGAGCGGTGAG+TGG + chr5_1:15514255-15514274 Msa0719880:CDS 45.0%
AACTACCGCAACGTGAAGAA+CGG - chr5_1:15514348-15514367 None:intergenic 45.0%
TAGCAGCAGCAAGAAGAACA+GGG - chr5_1:15514577-15514596 None:intergenic 45.0%
TTAGCAGCAGCAAGAAGAAC+AGG - chr5_1:15514578-15514597 None:intergenic 45.0%
TGTTCTTCTTGCTGCTGCTA+AGG + chr5_1:15514577-15514596 Msa0719880:CDS 45.0%
GTTCTTCTTGCTGCTGCTAA+GGG + chr5_1:15514578-15514597 Msa0719880:CDS 45.0%
TCTTTACCGTTGTACACCGT+TGG + chr5_1:15514622-15514641 Msa0719880:CDS 45.0%
TGCGATAATTATCATCGGCC+AGG - chr5_1:15514652-15514671 None:intergenic 45.0%
! GAGGCATTTGAGGAAATCGT+TGG - chr5_1:15514819-15514838 None:intergenic 45.0%
! AAGTGTGATTTGTGGGCAAG+AGG - chr5_1:15514838-15514857 None:intergenic 45.0%
ATGCGTGCCAATGCGTATAA+TGG - chr5_1:15514880-15514899 None:intergenic 45.0%
ATGCCTTCTGTGTTTCCAAG+TGG + chr5_1:15514898-15514917 Msa0719880:CDS 45.0%
CTACCACTTGGAAACACAGA+AGG - chr5_1:15514904-15514923 None:intergenic 45.0%
TCTGTGTTTCCAAGTGGTAG+TGG + chr5_1:15514904-15514923 Msa0719880:CDS 45.0%
AACCCATATCCACTACCACT+TGG - chr5_1:15514916-15514935 None:intergenic 45.0%
TCGGGGACATCCGATAAAAT+TGG - chr5_1:15515492-15515511 None:intergenic 45.0%
! ATTTTATCGGATGTCCCCGA+AGG + chr5_1:15515492-15515511 Msa0719880:intron 45.0%
! TTTTATCGGATGTCCCCGAA+GGG + chr5_1:15515493-15515512 Msa0719880:intron 45.0%
TACTCCTCAATTGTCCCTTC+GGG - chr5_1:15515510-15515529 None:intergenic 45.0%
ATATGCGAATGGCGATTCTG+AGG + chr5_1:15515813-15515832 Msa0719880:intron 45.0%
TCACAACAATGGTTCGCACA+AGG - chr5_1:15515984-15516003 None:intergenic 45.0%
GTCTTGTAATCCAGACCCTA+AGG + chr5_1:15516048-15516067 Msa0719880:intron 45.0%
! GGCTTTGTATTCACACCCTT+AGG - chr5_1:15516067-15516086 None:intergenic 45.0%
TCCCTCCAATTGTATCCATC+AGG + chr5_1:15516325-15516344 Msa0719880:intron 45.0%
ATGTTGCAAGCAGCAAAGCA+TGG + chr5_1:15516472-15516491 Msa0719880:CDS 45.0%
TGTTGCAAGCAGCAAAGCAT+GGG + chr5_1:15516473-15516492 Msa0719880:CDS 45.0%
AGGGTAATCCTGACCTCTTA+TGG + chr5_1:15516524-15516543 Msa0719880:intron 45.0%
GGGTAATCCTGACCTCTTAT+GGG + chr5_1:15516525-15516544 Msa0719880:intron 45.0%
TGCAACTGTAAATGGACGGA+AGG + chr5_1:15516627-15516646 Msa0719880:CDS 45.0%
AAATGCCGTGTAGACGCATT+TGG + chr5_1:15516658-15516677 Msa0719880:CDS 45.0%
TGGCAATTCCATGTTGCACT+TGG + chr5_1:15516678-15516697 Msa0719880:CDS 45.0%
AATTCCATGTTGCACTTGGC+AGG + chr5_1:15516682-15516701 Msa0719880:CDS 45.0%
ATATCCTGCCAAGTGCAACA+TGG - chr5_1:15516689-15516708 None:intergenic 45.0%
CTACGATCAAGATCAGAGGA+AGG - chr5_1:15516718-15516737 None:intergenic 45.0%
GGATCTACGATCAAGATCAG+AGG - chr5_1:15516722-15516741 None:intergenic 45.0%
TCTCTTTGCATCTGCATAGC+AGG - chr5_1:15516748-15516767 None:intergenic 45.0%
CATGTATGTATGCGAGTGAG+TGG - chr5_1:15516815-15516834 None:intergenic 45.0%
AATTGTGCACCCCAAGTGTA+AGG + chr5_1:15517273-15517292 Msa0719880:intron 45.0%
GTGATGTCGTGCAAGAACAA+GGG - chr5_1:15517490-15517509 None:intergenic 45.0%
TGTGATGTCGTGCAAGAACA+AGG - chr5_1:15517491-15517510 None:intergenic 45.0%
ACTTCGGTCCTTCTCTTCAT+TGG + chr5_1:15517559-15517578 Msa0719880:CDS 45.0%
TTTCAGCATAACGAGCCGTT+AGG - chr5_1:15517588-15517607 None:intergenic 45.0%
AACGGCTCGTTATGCTGAAA+AGG + chr5_1:15517588-15517607 Msa0719880:CDS 45.0%
! CATTGCCCTTTTCTTCTCTG+TGG + chr5_1:15517651-15517670 Msa0719880:CDS 45.0%
CATAGCAAGTGAAGCACAGA+AGG - chr5_1:15517692-15517711 None:intergenic 45.0%
GACGGAACTAGAACGATAAC+AGG - chr5_1:15517769-15517788 None:intergenic 45.0%
ATCTTGTGGGACATGGTCTG+TGG + chr5_1:15509107-15509126 Msa0719880:CDS 50.0%
TCTTGTGGGACATGGTCTGT+GGG + chr5_1:15509108-15509127 Msa0719880:CDS 50.0%
GCCGATCCAGATATTGAGCA+AGG + chr5_1:15509325-15509344 Msa0719880:CDS 50.0%
!! AGAATCGTGTTGACTCGTGG+GGG + chr5_1:15509698-15509717 Msa0719880:intron 50.0%
AAACCTCTCCCAAGACGATG+TGG + chr5_1:15509769-15509788 Msa0719880:intron 50.0%
AAACCACATCGTCTTGGGAG+AGG - chr5_1:15509775-15509794 None:intergenic 50.0%
TCTCCCAAGACGATGTGGTT+TGG + chr5_1:15509774-15509793 Msa0719880:intron 50.0%
CTCCCAAGACGATGTGGTTT+GGG + chr5_1:15509775-15509794 Msa0719880:intron 50.0%
TCCCAAGACGATGTGGTTTG+GGG + chr5_1:15509776-15509795 Msa0719880:intron 50.0%
TCCCCAAACCACATCGTCTT+GGG - chr5_1:15509780-15509799 None:intergenic 50.0%
GGTTTGGGGACGAAGCAATA+AGG + chr5_1:15509790-15509809 Msa0719880:intron 50.0%
AGTGACAACACCCCCACATT+AGG + chr5_1:15510064-15510083 Msa0719880:intron 50.0%
GTGGCGAACTTTCGTGAACA+AGG - chr5_1:15511142-15511161 None:intergenic 50.0%
GAGGATATGCGCTTATGAGG+CGG - chr5_1:15513655-15513674 None:intergenic 50.0%
TGGGAGGATATGCGCTTATG+AGG - chr5_1:15513652-15513671 None:intergenic 50.0%
TCATAAGCGCATATCCTCCC+AGG + chr5_1:15511600-15511619 Msa0719880:intron 50.0%
! TAAGTATGGTGGGGTGAGAG+AGG + chr5_1:15512161-15512180 Msa0719880:intron 50.0%
TCGCCTATATGGGTGTCAAG+TGG + chr5_1:15512729-15512748 Msa0719880:intron 50.0%
CGCCTATATGGGTGTCAAGT+GGG + chr5_1:15512730-15512749 Msa0719880:intron 50.0%
GCCTATATGGGTGTCAAGTG+GGG + chr5_1:15512731-15512750 Msa0719880:intron 50.0%
CCGCGTAACAGCAAGAATTG+TGG + chr5_1:15512831-15512850 Msa0719880:intron 50.0%
CGGAACGGTATAGCAAGCTA+TGG - chr5_1:15512965-15512984 None:intergenic 50.0%
TTGAGCTGTTCTGTCACCTC+CGG + chr5_1:15513595-15513614 Msa0719880:intron 50.0%
GGGGAAGAACTGTTGTATCC+TGG + chr5_1:15513632-15513651 Msa0719880:intron 50.0%
TCATAAGCGCATATCCTCCC+AGG - chr5_1:15511600-15511619 None:intergenic 50.0%
TGGGAGGATATGCGCTTATG+AGG + chr5_1:15513652-15513671 Msa0719880:intron 50.0%
GAGGATATGCGCTTATGAGG+CGG + chr5_1:15513655-15513674 Msa0719880:intron 50.0%
ATTCCACATCCTCTATGGGG+AGG + chr5_1:15514321-15514340 Msa0719880:CDS 50.0%
TTCACGTTGCGGTAGTTGCT+GGG + chr5_1:15514351-15514370 Msa0719880:CDS 50.0%
CAGCTCAGCAACAAGAGCTA+GGG - chr5_1:15514456-15514475 None:intergenic 50.0%
TCAGCTCAGCAACAAGAGCT+AGG - chr5_1:15514457-15514476 None:intergenic 50.0%
GGTCTTCCAACGGTGTACAA+CGG - chr5_1:15514631-15514650 None:intergenic 50.0%
TTGTACACCGTTGGAAGACC+TGG + chr5_1:15514631-15514650 Msa0719880:CDS 50.0%
!! TTGTGGGCAAGAGGCATTTG+AGG - chr5_1:15514829-15514848 None:intergenic 50.0%
ACTCCTCAATTGTCCCTTCG+GGG - chr5_1:15515509-15515528 None:intergenic 50.0%
TCCGTTTGTGTGCTTTGCAC+CGG + chr5_1:15516021-15516040 Msa0719880:intron 50.0%
TCCGGTGCAAAGCACACAAA+CGG - chr5_1:15516025-15516044 None:intergenic 50.0%
GTATTCACACCCTTAGGGTC+TGG - chr5_1:15516061-15516080 None:intergenic 50.0%
TCAATGGCCCATAAGAGGTC+AGG - chr5_1:15516535-15516554 None:intergenic 50.0%
TTGCATCTGCATAGCAGGAC+CGG - chr5_1:15516743-15516762 None:intergenic 50.0%
TACAGAAAGCCACAAGGAGC+TGG + chr5_1:15517336-15517355 Msa0719880:intron 50.0%
ACAAGGAGCTGGTGAAAGCT+GGG + chr5_1:15517347-15517366 Msa0719880:intron 50.0%
TGGTGAAAGCTGGGGAGAAA+TGG + chr5_1:15517356-15517375 Msa0719880:CDS 50.0%
GGTGAAAGCTGGGGAGAAAT+GGG + chr5_1:15517357-15517376 Msa0719880:CDS 50.0%
CTTGTGGGACATGGTCTGTG+GGG + chr5_1:15509109-15509128 Msa0719880:CDS 55.0%
GTCCCCAAACCACATCGTCT+TGG - chr5_1:15509781-15509800 None:intergenic 55.0%
CAGTGACTATGTCACGCCTC+AGG - chr5_1:15513694-15513713 None:intergenic 55.0%
GCCCCACTTGACACCCATAT+AGG - chr5_1:15512735-15512754 None:intergenic 55.0%
ATGAATACCAGGCACGCGCA+TGG + chr5_1:15512793-15512812 Msa0719880:intron 55.0%
TTACGCGGTTGTGCGCGAAT+AGG - chr5_1:15512819-15512838 None:intergenic 55.0%
CAGTGACTATGTCACGCCTC+AGG + chr5_1:15513694-15513713 Msa0719880:intron 55.0%
AAGAACGGTCCTCCCCATAG+AGG - chr5_1:15514333-15514352 None:intergenic 55.0%
GAGGACCGTTCTTCACGTTG+CGG + chr5_1:15514340-15514359 Msa0719880:CDS 55.0%
CTTCACGTTGCGGTAGTTGC+TGG + chr5_1:15514350-15514369 Msa0719880:CDS 55.0%
GCTCTTGTTGCTGAGCTGAC+CGG + chr5_1:15514458-15514477 Msa0719880:CDS 55.0%
TCATCGGCCAGGTCTTCCAA+CGG - chr5_1:15514641-15514660 None:intergenic 55.0%
TGTCCCCGAAGGGACAATTG+AGG + chr5_1:15515503-15515522 Msa0719880:intron 55.0%
CAGCTTTCACCAGCTCCTTG+TGG - chr5_1:15517348-15517367 None:intergenic 55.0%
CACAAGGAGCTGGTGAAAGC+TGG + chr5_1:15517346-15517365 Msa0719880:intron 55.0%
CAAGGAGCTGGTGAAAGCTG+GGG + chr5_1:15517348-15517367 Msa0719880:intron 55.0%
! AGGAAGAGGCGCAACTGTGA+CGG - chr5_1:15517787-15517806 None:intergenic 55.0%
GGGCCGCTTGCATGAGATCT+TGG + chr5_1:15512751-15512770 Msa0719880:intron 60.0%
GGTCCTCCCCATAGAGGATG+TGG - chr5_1:15514327-15514346 None:intergenic 60.0%
GCTGCAGCTTTCACTGTCCC+TGG + chr5_1:15517439-15517458 Msa0719880:CDS 60.0%
GCAGCTTTCACTGTCCCTGG+TGG + chr5_1:15517442-15517461 Msa0719880:CDS 60.0%
GAATAGGCCATGCGCGTGCC+TGG - chr5_1:15512803-15512822 None:intergenic 65.0%
TGCGGTAGTTGCTGGGCACG+AGG + chr5_1:15514358-15514377 Msa0719880:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 15509103 15517837 15509103 ID=Msa0719880;Name=Msa0719880
chr5_1 mRNA 15509103 15517837 15509103 ID=Msa0719880-mRNA-1;Parent=Msa0719880;Name=Msa0719880-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|0|0|1|0.16|0.28|7|0|580
chr5_1 exon 15509103 15509346 15509103 ID=Msa0719880-mRNA-1:exon:5980;Parent=Msa0719880-mRNA-1
chr5_1 exon 15514213 15514443 15514213 ID=Msa0719880-mRNA-1:exon:5981;Parent=Msa0719880-mRNA-1
chr5_1 exon 15514453 15514674 15514453 ID=Msa0719880-mRNA-1:exon:5982;Parent=Msa0719880-mRNA-1
chr5_1 exon 15514797 15514958 15514797 ID=Msa0719880-mRNA-1:exon:5983;Parent=Msa0719880-mRNA-1
chr5_1 exon 15516347 15516526 15516347 ID=Msa0719880-mRNA-1:exon:5984;Parent=Msa0719880-mRNA-1
chr5_1 exon 15516569 15516783 15516569 ID=Msa0719880-mRNA-1:exon:5985;Parent=Msa0719880-mRNA-1
chr5_1 exon 15517352 15517837 15517352 ID=Msa0719880-mRNA-1:exon:5986;Parent=Msa0719880-mRNA-1
chr5_1 CDS 15509103 15509346 15509103 ID=Msa0719880-mRNA-1:cds;Parent=Msa0719880-mRNA-1
chr5_1 CDS 15514213 15514443 15514213 ID=Msa0719880-mRNA-1:cds;Parent=Msa0719880-mRNA-1
chr5_1 CDS 15514453 15514674 15514453 ID=Msa0719880-mRNA-1:cds;Parent=Msa0719880-mRNA-1
chr5_1 CDS 15514797 15514958 15514797 ID=Msa0719880-mRNA-1:cds;Parent=Msa0719880-mRNA-1
chr5_1 CDS 15516347 15516526 15516347 ID=Msa0719880-mRNA-1:cds;Parent=Msa0719880-mRNA-1
chr5_1 CDS 15516569 15516783 15516569 ID=Msa0719880-mRNA-1:cds;Parent=Msa0719880-mRNA-1
chr5_1 CDS 15517352 15517837 15517352 ID=Msa0719880-mRNA-1:cds;Parent=Msa0719880-mRNA-1
Gene Sequence

>Msa0719880

AACTATCTTGTGGGACATGGTCTGTGGGGTGTTGTGACCTCTATTCCTGAAATTGGTGCGCGTTCTAAGACTGAATATGAGATTTGGAACAGGAAGAATGGGAAGGCATTGCATATCATTCAACTAACATGTGGACCAGAGAATCTTACTCATATTAGAGATCTTCATATTGCTAAAGAAGCCTGGAATAAATTGGGTGCAACTTATAGCTCAGATTTGCAAGCCGATCCAGATATTGAGCAAGGTGTGGTGGATGATAGTCTCCTTCAATATAAATCGCTGCACAAGTATATTGAGAGCGGTGAGTGGAAAGATGCAAACTCGTTTATTAAGAGGGACAGTACAGCAATATATTCCACATCCTCTATGGGGAGGACCGTTCTTCACGTTGCGGTAGTTGCTGGGCACGAGGAAATTGTGAAGAAATTGGTGAAGGAAGGGAAAGATAAGTTAGTGAAAATGAAAGACAATCGAGCCCTAGCTCTTGTTGCTGAGCTGACCGGAAACACGAATATAGCGAAGTGTATGACTATGGTATATAAGAAAATAACACGGTCAGAGGACCTGTTATCTATGAAGACCAATGATGGTGAAATCCCTGTTCTTCTTGCTGCTGCTAAGGGACACAAAGAAATGACACGTTATCTTTACCGTTGTACACCGTTGGAAGACCTGGCCGATGATAATTATCGCAATGGTGTGGCTTTGAGTTTACTCCAACGATTTCCTCAAATGCCTCTTGCCCACAAATCACACTTTGAATCGGATTGTGTGCAACCATTATACGCATTGGCACGCATGCCTTCTGTGTTTCCAAGTGGTAGTGGATATGGGTTCATACGACAATTCTTTAACGATAGAATAAGGAAAATATATAATCAGAAAATGACCTACCGTGTAGCTCTTGAAATATTGAGTTGCTTGCACCAAAGAATTCAAGAGTTTAAGGAATCAGAACTTAGAGAGGCTTCGGCTTACGATGCGATGTTGCAAGCAGCAAAGCATGGGATTATTGAGTTTATAGATGCAATGAGAAAGGGCGTATTTTCACATGCAATTTTGAACCGTAGAAAAGCCGTTTTCGAACTCATACATGATGCAACTGTAAATGGACGGAAGGAGATAGTTAAATGCCGTGTAGACGCATTTGGCAATTCCATGTTGCACTTGGCAGGATATTTAGGGCCTTCCTCTGATCTTGATCGTAGATCCGGTCCTGCTATGCAGATGCAAAGAGAAATTCTATGGTTCAAGGAGCTGGTGAAAGCTGGGGAGAAATGGGCAAAAGATACAGCTGGTTCATTTACTCTTGTGGCTACACTCATCACTACTATCATGTTTGCTGCAGCTTTCACTGTCCCTGGTGGAAACAATCAAGACAATGGAGTTCCCTTGTTCTTGCACGACATCACATTTGATGTGTTTATTATAGCAGATGCAGCATCTCTTTTCACTTCTTCAACTTCGGTCCTTCTCTTCATTGGAATCCTAACGGCTCGTTATGCTGAAAAGGATTTCCTTAAGTCATTGCCACTAAGGTTACTTTTCGCACTCATTGCCCTTTTCTTCTCTGTGGTTTCTATGATAGTTGCCTTCTGTGCTTCACTTGCTATGCTCTTAAAGGGACATCATAGAGTCATAATAACAGCAATGTCATTTGCCAGTGTTCCTGTTATCGTTCTAGTTCCGTCACAGTTGCGCCTCTTCCTTGAGATTTTCAAGTCTACAGTATTATCCAAT
Protein sequence

>Msa0719880

NYLVGHGLWGVVTSIPEIGARSKTEYEIWNRKNGKALHIIQLTCGPENLTHIRDLHIAKEAWNKLGATYSSDLQADPDIEQGVVDDSLLQYKSLHKYIESGEWKDANSFIKRDSTAIYSTSSMGRTVLHVAVVAGHEEIVKKLVKEGKDKLVKMKDNRALALVAELTGNTNIAKCMTMVYKKITRSEDLLSMKTNDGEIPVLLAAAKGHKEMTRYLYRCTPLEDLADDNYRNGVALSLLQRFPQMPLAHKSHFESDCVQPLYALARMPSVFPSGSGYGFIRQFFNDRIRKIYNQKMTYRVALEILSCLHQRIQEFKESELREASAYDAMLQAAKHGIIEFIDAMRKGVFSHAILNRRKAVFELIHDATVNGRKEIVKCRVDAFGNSMLHLAGYLGPSSDLDRRSGPAMQMQREILWFKELVKAGEKWAKDTAGSFTLVATLITTIMFAAAFTVPGGNNQDNGVPLFLHDITFDVFIIADAASLFTSSTSVLLFIGILTARYAEKDFLKSLPLRLLFALIALFFSVVSMIVAFCASLAMLLKGHHRVIITAMSFASVPVIVLVPSQLRLFLEIFKSTVLSN