Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802590 | A0A396HTM3 | 66.477 | 704 | 119 | 10 | 1 | 589 | 32 | 733 | 0.0 | 872 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048950 | Msa0802590 | 0.806524 | 7.888883e-50 | -8.615850e-47 |
| Msa0059880 | Msa0802590 | 0.851707 | 7.447590e-61 | -8.615850e-47 |
| Msa0605400 | Msa0802590 | 0.810384 | 1.184185e-50 | -8.615850e-47 |
| Msa0623980 | Msa0802590 | 0.811009 | 8.672368e-51 | -8.615850e-47 |
| Msa0631700 | Msa0802590 | 0.809058 | 2.283100e-50 | -8.615850e-47 |
| Msa0670360 | Msa0802590 | 0.825922 | 3.597924e-54 | -8.615850e-47 |
| Msa0671640 | Msa0802590 | 0.852912 | 3.380429e-61 | -8.615850e-47 |
| Msa0684720 | Msa0802590 | 0.810347 | 1.205722e-50 | -8.615850e-47 |
| Msa0719880 | Msa0802590 | 0.835831 | 1.334507e-56 | -8.615850e-47 |
| Msa0727480 | Msa0802590 | 0.809196 | 2.132597e-50 | -8.615850e-47 |
| Msa0777070 | Msa0802590 | 0.805350 | 1.392737e-49 | -8.615850e-47 |
| Msa0802590 | Msa0814160 | 0.814659 | 1.376395e-51 | -8.615850e-47 |
| Msa0802590 | Msa0841130 | 0.952438 | 2.423427e-110 | -8.615850e-47 |
| Msa0802590 | Msa0841170 | 0.930007 | 3.060329e-93 | -8.615850e-47 |
| Msa0802590 | Msa0854840 | 0.811732 | 6.042213e-51 | -8.615850e-47 |
| Msa0802590 | Msa0883640 | 0.822900 | 1.849528e-53 | -8.615850e-47 |
| Msa0802590 | Msa0902340 | 0.812724 | 3.670144e-51 | -8.615850e-47 |
| Msa0802590 | Msa0910830 | 0.842658 | 2.260298e-58 | -8.615850e-47 |
| Msa0802590 | Msa0960090 | 0.826143 | 3.189361e-54 | -8.615850e-47 |
| Msa0802590 | Msa0985700 | 0.824571 | 7.509866e-54 | -8.615850e-47 |
| Msa0802590 | Msa1003110 | 0.800227 | 1.590860e-48 | -8.615850e-47 |
| Msa0802590 | Msa1020540 | 0.836923 | 7.040836e-57 | -8.615850e-47 |
| Msa0802590 | Msa1021620 | 0.830022 | 3.709720e-55 | -8.615850e-47 |
| Msa0802590 | Msa1024350 | 0.828629 | 8.082675e-55 | -8.615850e-47 |
| Msa0802590 | Msa1061670 | 0.813442 | 2.555023e-51 | -8.615850e-47 |
| Msa0802590 | Msa1087380 | 0.808810 | 2.579088e-50 | -8.615850e-47 |
| Msa0802590 | Msa1109880 | 0.809345 | 1.981426e-50 | -8.615850e-47 |
| Msa0802590 | Msa1109890 | 0.838541 | 2.705024e-57 | -8.615850e-47 |
| Msa0802590 | Msa1149020 | 0.825452 | 4.651028e-54 | -8.615850e-47 |
| Msa0802590 | Msa1152180 | 0.804881 | 1.745633e-49 | -8.615850e-47 |
| Msa0802590 | Msa1214960 | 0.800184 | 1.623572e-48 | -8.615850e-47 |
| Msa0802590 | Msa1286420 | 0.807239 | 5.570500e-50 | -8.615850e-47 |
| Msa0802590 | Msa1296870 | 0.810511 | 1.111771e-50 | -8.615850e-47 |
| Msa0802590 | Msa1300610 | 0.802739 | 4.863907e-49 | -8.615850e-47 |
| Msa0802590 | Msa1373560 | 0.812165 | 4.863847e-51 | -8.615850e-47 |
| Msa0802590 | Msa1440400 | 0.938325 | 8.114619e-99 | -8.615850e-47 |
| Msa0802590 | Msa1459610 | 0.804875 | 1.750736e-49 | -8.615850e-47 |
| Msa0143680 | Msa0802590 | 0.918794 | 1.003095e-86 | -8.615850e-47 |
| Msa0143710 | Msa0802590 | 0.940771 | 1.318167e-100 | -8.615850e-47 |
| Msa0143740 | Msa0802590 | 0.945198 | 4.780575e-104 | -8.615850e-47 |
| Msa0143770 | Msa0802590 | 0.942072 | 1.370358e-101 | -8.615850e-47 |
| Msa0150910 | Msa0802590 | 0.822662 | 2.101149e-53 | -8.615850e-47 |
| Msa0177550 | Msa0802590 | 0.802991 | 4.314386e-49 | -8.615850e-47 |
| Msa0190670 | Msa0802590 | 0.820237 | 7.625594e-53 | -8.615850e-47 |
| Msa0194230 | Msa0802590 | 0.803422 | 3.512537e-49 | -8.615850e-47 |
| Msa0252930 | Msa0802590 | 0.817193 | 3.743181e-52 | -8.615850e-47 |
| Msa0259110 | Msa0802590 | 0.807286 | 5.443767e-50 | -8.615850e-47 |
| Msa0278950 | Msa0802590 | 0.800699 | 1.275107e-48 | -8.615850e-47 |
| Msa0336070 | Msa0802590 | 0.807290 | 5.433942e-50 | -8.615850e-47 |
| Msa0549920 | Msa0802590 | 0.810881 | 9.243966e-51 | -8.615850e-47 |
| Msa0591490 | Msa0802590 | 0.821695 | 3.522327e-53 | -8.615850e-47 |
| Msa0594320 | Msa0802590 | 0.815700 | 8.084165e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802590 | MtrunA17_Chr5g0410171 | 66.477 | 704 | 119 | 10 | 1 | 589 | 32 | 733 | 0.0 | 872 |
| Msa0802590 | MtrunA17_Chr5g0410341 | 88.427 | 337 | 6 | 2 | 288 | 591 | 411 | 747 | 0.0 | 589 |
| Msa0802590 | MtrunA17_Chr5g0410341 | 87.859 | 313 | 14 | 4 | 1 | 289 | 30 | 342 | 0.0 | 555 |
| Msa0802590 | MtrunA17_Chr5g0410201 | 77.982 | 327 | 39 | 2 | 296 | 589 | 1 | 327 | 1.22e-178 | 508 |
| Msa0802590 | MtrunA17_Chr5g0410271 | 77.301 | 326 | 41 | 2 | 298 | 590 | 2 | 327 | 6.74e-176 | 501 |
| Msa0802590 | MtrunA17_Chr6g0457101 | 41.359 | 677 | 292 | 16 | 1 | 590 | 30 | 688 | 2.75e-149 | 446 |
| Msa0802590 | MtrunA17_Chr5g0410461 | 53.117 | 369 | 130 | 7 | 260 | 587 | 96 | 462 | 1.68e-112 | 344 |
| Msa0802590 | MtrunA17_Chr6g0456141 | 52.819 | 337 | 122 | 5 | 288 | 590 | 51 | 384 | 9.34e-112 | 339 |
| Msa0802590 | MtrunA17_Chr6g0456101 | 36.262 | 717 | 311 | 24 | 1 | 583 | 30 | 734 | 4.72e-109 | 343 |
| Msa0802590 | MtrunA17_Chr5g0410371 | 59.122 | 296 | 82 | 4 | 329 | 587 | 1 | 294 | 5.84e-103 | 313 |
| Msa0802590 | MtrunA17_Chr5g0410191 | 80.368 | 163 | 32 | 0 | 429 | 591 | 32 | 194 | 3.40e-84 | 261 |
| Msa0802590 | MtrunA17_Chr5g0410581 | 31.234 | 778 | 332 | 25 | 1 | 588 | 31 | 795 | 1.34e-81 | 272 |
| Msa0802590 | MtrunA17_Chr5g0410291 | 67.010 | 194 | 41 | 5 | 110 | 284 | 1 | 190 | 3.37e-77 | 243 |
| Msa0802590 | MtrunA17_Chr5g0410211 | 63.918 | 194 | 50 | 4 | 110 | 283 | 1 | 194 | 5.03e-71 | 227 |
| Msa0802590 | MtrunA17_Chr5g0410181 | 78.519 | 135 | 29 | 0 | 457 | 591 | 1 | 135 | 4.37e-68 | 217 |
| Msa0802590 | MtrunA17_Chr2g0297701 | 30.866 | 554 | 307 | 17 | 90 | 591 | 44 | 573 | 1.70e-61 | 213 |
| Msa0802590 | MtrunA17_Chr5g0443001 | 31.336 | 584 | 301 | 21 | 91 | 587 | 31 | 601 | 2.22e-57 | 202 |
| Msa0802590 | MtrunA17_Chr2g0297691 | 27.474 | 677 | 377 | 23 | 4 | 587 | 36 | 691 | 3.61e-52 | 190 |
| Msa0802590 | MtrunA17_Chr2g0297681 | 27.164 | 670 | 384 | 19 | 4 | 586 | 36 | 688 | 9.70e-50 | 183 |
| Msa0802590 | MtrunA17_Chr2g0297651 | 26.746 | 673 | 384 | 21 | 4 | 587 | 38 | 690 | 1.66e-49 | 182 |
| Msa0802590 | MtrunA17_Chr3g0100741 | 26.381 | 561 | 318 | 12 | 91 | 570 | 33 | 579 | 5.38e-47 | 174 |
| Msa0802590 | MtrunA17_Chr2g0297491 | 35.495 | 293 | 152 | 5 | 329 | 587 | 88 | 377 | 1.03e-45 | 166 |
| Msa0802590 | MtrunA17_Chr5g0410451 | 49.697 | 165 | 78 | 1 | 429 | 588 | 71 | 235 | 1.08e-45 | 161 |
| Msa0802590 | MtrunA17_Chr5g0410541 | 52.121 | 165 | 73 | 2 | 429 | 588 | 53 | 216 | 7.20e-44 | 155 |
| Msa0802590 | MtrunA17_Chr6g0456151 | 42.023 | 257 | 118 | 9 | 1 | 236 | 30 | 276 | 9.26e-43 | 155 |
| Msa0802590 | MtrunA17_Chr5g0410471 | 45.909 | 220 | 105 | 5 | 5 | 221 | 105 | 313 | 5.28e-41 | 151 |
| Msa0802590 | MtrunA17_Chr2g0297481 | 34.021 | 291 | 155 | 6 | 329 | 587 | 186 | 471 | 1.84e-40 | 154 |
| Msa0802590 | MtrunA17_Chr3g0100301 | 41.327 | 196 | 78 | 2 | 418 | 583 | 209 | 397 | 3.80e-39 | 148 |
| Msa0802590 | MtrunA17_Chr3g0096941 | 24.740 | 578 | 333 | 15 | 91 | 581 | 33 | 595 | 8.19e-39 | 150 |
| Msa0802590 | MtrunA17_Chr2g0297711 | 26.542 | 535 | 301 | 17 | 90 | 587 | 47 | 526 | 7.17e-38 | 147 |
| Msa0802590 | MtrunA17_Chr5g0410411 | 39.464 | 261 | 107 | 9 | 1 | 221 | 30 | 279 | 1.47e-36 | 139 |
| Msa0802590 | MtrunA17_Chr5g0410381 | 39.837 | 246 | 101 | 8 | 82 | 286 | 3 | 242 | 3.27e-36 | 135 |
| Msa0802590 | MtrunA17_Chr5g0410251 | 65.060 | 83 | 29 | 0 | 1 | 83 | 28 | 110 | 2.07e-32 | 120 |
| Msa0802590 | MtrunA17_Chr2g0286601 | 33.577 | 274 | 139 | 5 | 329 | 569 | 390 | 653 | 5.78e-30 | 125 |
| Msa0802590 | MtrunA17_Chr5g0410511 | 42.949 | 156 | 80 | 1 | 429 | 584 | 32 | 178 | 1.26e-29 | 116 |
| Msa0802590 | MtrunA17_Chr5g0410501 | 45.139 | 144 | 73 | 3 | 289 | 428 | 147 | 288 | 1.29e-29 | 119 |
| Msa0802590 | MtrunA17_Chr3g0098481 | 28.931 | 318 | 172 | 8 | 316 | 587 | 22 | 331 | 3.07e-28 | 115 |
| Msa0802590 | MtrunA17_Chr3g0102001 | 29.276 | 304 | 165 | 6 | 328 | 588 | 440 | 736 | 2.26e-26 | 114 |
| Msa0802590 | MtrunA17_Chr2g0286551 | 24.664 | 596 | 319 | 16 | 94 | 583 | 83 | 654 | 1.02e-24 | 108 |
| Msa0802590 | MtrunA17_Chr2g0286561 | 38.849 | 139 | 78 | 1 | 431 | 569 | 47 | 178 | 2.02e-24 | 101 |
| Msa0802590 | MtrunA17_Chr5g0410551 | 50.476 | 105 | 46 | 3 | 329 | 429 | 1 | 103 | 3.50e-23 | 95.1 |
| Msa0802590 | MtrunA17_Chr3g0098301 | 26.861 | 309 | 182 | 8 | 316 | 583 | 88 | 393 | 2.73e-22 | 99.8 |
| Msa0802590 | MtrunA17_Chr1g0211541 | 25.541 | 462 | 250 | 18 | 101 | 508 | 6 | 427 | 2.76e-22 | 100 |
| Msa0802590 | MtrunA17_Chr5g0410561 | 37.321 | 209 | 120 | 7 | 32 | 236 | 2 | 203 | 8.31e-22 | 94.4 |
| Msa0802590 | MtrunA17_Chr5g0439081 | 36.076 | 158 | 94 | 3 | 428 | 580 | 41 | 196 | 3.41e-21 | 92.4 |
| Msa0802590 | MtrunA17_Chr2g0284541 | 28.391 | 317 | 184 | 7 | 300 | 581 | 322 | 630 | 1.08e-19 | 93.2 |
| Msa0802590 | MtrunA17_Chr3g0098531 | 27.234 | 235 | 136 | 4 | 385 | 585 | 48 | 281 | 2.64e-19 | 89.0 |
| Msa0802590 | MtrunA17_Chr2g0284501 | 28.197 | 305 | 173 | 8 | 322 | 590 | 362 | 656 | 6.55e-19 | 90.9 |
| Msa0802590 | MtrunA17_Chr5g0439061 | 27.740 | 292 | 172 | 5 | 329 | 583 | 437 | 726 | 7.63e-19 | 90.9 |
| Msa0802590 | MtrunA17_Chr5g0410441 | 48.889 | 90 | 40 | 3 | 344 | 429 | 1 | 88 | 2.96e-18 | 80.9 |
| Msa0802590 | MtrunA17_Chr3g0100921 | 40.650 | 123 | 72 | 1 | 448 | 569 | 2 | 124 | 8.19e-18 | 80.5 |
| Msa0802590 | MtrunA17_Chr5g0439051 | 34.591 | 159 | 102 | 2 | 429 | 586 | 50 | 207 | 1.14e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802590 | AT3G18670.1 | 35.678 | 583 | 284 | 19 | 70 | 591 | 35 | 587 | 3.16e-99 | 314 |
| Msa0802590 | AT3G18670.2 | 33.599 | 628 | 291 | 19 | 70 | 591 | 35 | 642 | 1.72e-96 | 308 |
| Msa0802590 | AT5G04690.3 | 30.756 | 582 | 312 | 14 | 81 | 587 | 66 | 631 | 1.46e-66 | 229 |
| Msa0802590 | AT5G04690.1 | 31.616 | 563 | 312 | 16 | 81 | 587 | 66 | 611 | 6.33e-65 | 224 |
| Msa0802590 | AT5G04690.2 | 30.201 | 596 | 311 | 15 | 81 | 587 | 66 | 645 | 2.65e-64 | 223 |
| Msa0802590 | AT5G04700.1 | 29.711 | 589 | 310 | 15 | 90 | 587 | 80 | 655 | 3.02e-61 | 215 |
| Msa0802590 | AT5G04680.3 | 28.767 | 584 | 316 | 17 | 90 | 587 | 67 | 636 | 5.41e-54 | 194 |
| Msa0802590 | AT5G04680.4 | 28.523 | 596 | 316 | 17 | 90 | 587 | 67 | 650 | 2.68e-52 | 190 |
| Msa0802590 | AT5G04730.1 | 29.795 | 537 | 284 | 16 | 138 | 587 | 58 | 588 | 2.14e-50 | 184 |
| Msa0802590 | AT5G04680.2 | 29.081 | 533 | 270 | 16 | 151 | 587 | 7 | 527 | 8.65e-49 | 178 |
| Msa0802590 | AT5G35810.1 | 33.993 | 303 | 158 | 6 | 329 | 591 | 35 | 335 | 1.55e-47 | 170 |
| Msa0802590 | AT5G04680.1 | 27.564 | 624 | 315 | 22 | 90 | 587 | 67 | 679 | 3.13e-47 | 176 |
| Msa0802590 | AT3G54065.1 | 39.535 | 172 | 68 | 2 | 415 | 550 | 8 | 179 | 1.09e-32 | 125 |
| Msa0802590 | AT5G04700.2 | 25.815 | 399 | 224 | 12 | 90 | 429 | 80 | 465 | 5.39e-24 | 105 |
| Msa0802590 | AT3G54070.1 | 28.324 | 173 | 111 | 6 | 66 | 232 | 24 | 189 | 5.23e-12 | 67.0 |
| Msa0802590 | AT5G35830.1 | 30.000 | 160 | 101 | 4 | 78 | 232 | 73 | 226 | 7.86e-12 | 66.6 |
Find 143 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCACTTGGCAGGATATTT+AGG | 0.127030 | 5_3:-17045820 | Msa0802590:CDS |
| CCAAAGAATTCAAGAGTTTA+AGG | 0.157617 | 5_3:-17046097 | Msa0802590:CDS |
| TTCACTTGCTATGCTCTTAA+AGG | 0.220345 | 5_3:-17044812 | Msa0802590:CDS |
| CCTTAAACTCTTGAATTCTT+TGG | 0.238324 | 5_3:+17046097 | None:intergenic |
| TAAAGAAGCCTGGAATAAAT+TGG | 0.241875 | 5_3:-17049188 | Msa0802590:CDS |
| ATACATGATGCAACTGTAAA+TGG | 0.242921 | 5_3:-17045892 | Msa0802590:CDS |
| TTAGAACGCGCACCAATTTC+AGG | 0.251761 | 5_3:+17049316 | None:intergenic |
| CTTCGCTATATTCGTGTTTC+CGG | 0.254247 | 5_3:+17048038 | None:intergenic |
| AATATATTCCACATCCTCTA+TGG | 0.260429 | 5_3:-17048199 | Msa0802590:CDS |
| GTGACCTCTATTCCTGAAAT+TGG | 0.292763 | 5_3:-17049328 | Msa0802590:CDS |
| TATATACCTTGCTCAATATC+TGG | 0.305429 | 5_3:+17049133 | None:intergenic |
| TGCACTTGGCAGGATATTTA+GGG | 0.308043 | 5_3:-17045819 | Msa0802590:CDS |
| TTTCCAAGTGGTAGTGGATA+TGG | 0.311953 | 5_3:-17047605 | Msa0802590:CDS |
| ACTTCGGTCCTTCTCTTCAT+TGG | 0.319322 | 5_3:-17044952 | Msa0802590:CDS |
| AATTGTATCCATCAGGAATA+AGG | 0.321064 | 5_3:-17046179 | Msa0802590:intron |
| CTTCACGTTGCGGTAGTTGC+TGG | 0.322177 | 5_3:-17048165 | Msa0802590:CDS |
| CTAAGACTGAATATGAGATT+TGG | 0.338368 | 5_3:-17049297 | Msa0802590:CDS |
| AGGGTAATCCTGACCTCTTA+TGG | 0.352153 | 5_3:-17045987 | Msa0802590:CDS |
| CGAGGAAATTGTGAAGAAAT+TGG | 0.372095 | 5_3:-17048139 | Msa0802590:CDS |
| ATGCAAACTCGTTTATTAAG+AGG | 0.378242 | 5_3:-17048233 | Msa0802590:CDS |
| AACAGGGATTTCACCATCAT+TGG | 0.379563 | 5_3:+17047957 | None:intergenic |
| TGGTGAAAGCTGGGGAGAAA+TGG | 0.379583 | 5_3:-17045155 | Msa0802590:CDS |
| TGTTCTTCTTGCTGCTGCTA+AGG | 0.379583 | 5_3:-17047938 | Msa0802590:CDS |
| AGTTGCACCCAATTTATTCC+AGG | 0.399506 | 5_3:+17049180 | None:intergenic |
| CACAAGGAGCTGGTGAAAGC+TGG | 0.403742 | 5_3:-17045165 | Msa0802590:intron |
| GCTGCAGCTTTCACTGTCCC+TGG | 0.408383 | 5_3:-17045072 | Msa0802590:CDS |
| TTAGCAGCAGCAAGAAGAAC+AGG | 0.410668 | 5_3:+17047940 | None:intergenic |
| TAGAAACCACAGAGAAGAAA+AGG | 0.416389 | 5_3:+17044854 | None:intergenic |
| TTCCAAGTGGTAGTGGATAT+GGG | 0.416844 | 5_3:-17047604 | Msa0802590:CDS |
| AAATGCCGTGTAGACGCATT+TGG | 0.419337 | 5_3:-17045853 | Msa0802590:CDS |
| AATTCCATGTTGCACTTGGC+AGG | 0.419647 | 5_3:-17045829 | Msa0802590:CDS |
| ATCAGAACTTAGAGAGGCTT+CGG | 0.421195 | 5_3:-17046073 | Msa0802590:CDS |
| GGGTAATCCTGACCTCTTAT+GGG | 0.423361 | 5_3:-17045986 | Msa0802590:CDS |
| CTAATATGAGTAAGATTCTC+TGG | 0.424630 | 5_3:+17049226 | None:intergenic |
| TCACTTGCTATGCTCTTAAA+GGG | 0.427681 | 5_3:-17044811 | Msa0802590:CDS |
| CATTGGTCTTCATAGATAAC+AGG | 0.427879 | 5_3:+17047974 | None:intergenic |
| ACCTTAGTGGCAATGACTTA+AGG | 0.429666 | 5_3:+17044896 | None:intergenic |
| AGATGCAAAGAGAAATTCTA+TGG | 0.430747 | 5_3:-17045756 | Msa0802590:CDS |
| TTCACGTTGCGGTAGTTGCT+GGG | 0.432176 | 5_3:-17048164 | Msa0802590:CDS |
| TCTCTTTGCATCTGCATAGC+AGG | 0.438079 | 5_3:+17045766 | None:intergenic |
| GAGATTTGGAACAGGAAGAA+TGG | 0.441267 | 5_3:-17049283 | Msa0802590:CDS |
| CCACAAATCACACTTTGAAT+CGG | 0.443086 | 5_3:-17047672 | Msa0802590:CDS |
| TCTGTGTTTCCAAGTGGTAG+TGG | 0.443413 | 5_3:-17047611 | Msa0802590:CDS |
| CTGAATATGAGATTTGGAAC+AGG | 0.444534 | 5_3:-17049291 | Msa0802590:CDS |
| GTTCTTCTTGCTGCTGCTAA+GGG | 0.445513 | 5_3:-17047937 | Msa0802590:CDS |
| GACGGAACTAGAACGATAAC+AGG | 0.453839 | 5_3:+17044745 | None:intergenic |
| CGATTCAAAGTGTGATTTGT+GGG | 0.456154 | 5_3:+17047673 | None:intergenic |
| TATAGCGAAGTGTATGACTA+TGG | 0.458675 | 5_3:-17048025 | Msa0802590:CDS |
| TCCTTAAGTCATTGCCACTA+AGG | 0.460081 | 5_3:-17044897 | Msa0802590:CDS |
| TCTTGTGGGACATGGTCTGT+GGG | 0.464135 | 5_3:-17049356 | Msa0802590:CDS |
| TCAATGGCCCATAAGAGGTC+AGG | 0.465739 | 5_3:+17045979 | None:intergenic |
| TTTCAGCGTAACGAGCCGTT+AGG | 0.467061 | 5_3:+17044926 | None:intergenic |
| GTTTATAGATGCAATGAGAA+AGG | 0.467103 | 5_3:-17046007 | Msa0802590:CDS |
| TTGTGGGCAAGAGGCATTTG+AGG | 0.467341 | 5_3:+17047689 | None:intergenic |
| CTTGTTAGAAACTATCTTGT+GGG | 0.467922 | 5_3:-17049370 | None:intergenic |
| ATGCGTGCCAATGCGTATAA+TGG | 0.471182 | 5_3:+17047638 | None:intergenic |
| TGTGCAGCGATTTATATTGA+AGG | 0.474499 | 5_3:+17048283 | None:intergenic |
| TTCATATTGCTAAAGAAGCC+TGG | 0.477292 | 5_3:-17049198 | Msa0802590:CDS |
| AAAGAAGCCTGGAATAAATT+GGG | 0.481257 | 5_3:-17049187 | Msa0802590:CDS |
| ACAAGGAGCTGGTGAAAGCT+GGG | 0.481894 | 5_3:-17045164 | Msa0802590:intron |
| GGTGAAAGCTGGGGAGAAAT+GGG | 0.482292 | 5_3:-17045154 | Msa0802590:CDS |
| AGCTGGTTCATTTACTCTTG+TGG | 0.482801 | 5_3:-17045121 | Msa0802590:CDS |
| AGATTTGGAACAGGAAGAAT+GGG | 0.485550 | 5_3:-17049282 | Msa0802590:CDS |
| TCAGCTCAGCAACAAGAGCT+AGG | 0.486371 | 5_3:+17048061 | None:intergenic |
| CATAGCAAGTGAAGCACAGA+AGG | 0.486804 | 5_3:+17044822 | None:intergenic |
| ATCTTGTGGGACATGGTCTG+TGG | 0.486835 | 5_3:-17049357 | Msa0802590:CDS |
| GTGAAGAAATTGGTGAAGGA+AGG | 0.488215 | 5_3:-17048129 | Msa0802590:CDS |
| TTGCATCTGCATAGCAGGAC+CGG | 0.495069 | 5_3:+17045771 | None:intergenic |
| ATATATTCCACATCCTCTAT+GGG | 0.496055 | 5_3:-17048198 | Msa0802590:CDS |
| TTGTCTTGATTGTTTCCACC+AGG | 0.496117 | 5_3:+17045054 | None:intergenic |
| TTGTACACCGTTGGAAGACC+TGG | 0.502955 | 5_3:-17047884 | Msa0802590:CDS |
| TTTATAGATGCAATGAGAAA+GGG | 0.503030 | 5_3:-17046006 | Msa0802590:CDS |
| ATCATGTATGAGTTCGAAAA+CGG | 0.503307 | 5_3:+17045906 | None:intergenic |
| TGCGATAATTATCATCGGCC+AGG | 0.509460 | 5_3:+17047866 | None:intergenic |
| TGGCAATTCCATGTTGCACT+TGG | 0.511014 | 5_3:-17045833 | Msa0802590:CDS |
| TCTTTACCGTTGTACACCGT+TGG | 0.515694 | 5_3:-17047893 | Msa0802590:CDS |
| TCTGATCTTGATCGTAGATC+CGG | 0.515841 | 5_3:-17045790 | Msa0802590:CDS |
| CGCACCAATTTCAGGAATAG+AGG | 0.521001 | 5_3:+17049324 | None:intergenic |
| GCTCTTGTTGCTGAGCTGAC+CGG | 0.526277 | 5_3:-17048057 | Msa0802590:CDS |
| CCGATTCAAAGTGTGATTTG+TGG | 0.526820 | 5_3:+17047672 | None:intergenic |
| TGCAAACTCGTTTATTAAGA+GGG | 0.527286 | 5_3:-17048232 | Msa0802590:CDS |
| TGTGATGTCGTGCAAGAACA+AGG | 0.535047 | 5_3:+17045023 | None:intergenic |
| GAGGCATTTGAGGAAATCGT+TGG | 0.537554 | 5_3:+17047699 | None:intergenic |
| GGTCCTCCCCATAGAGGATG+TGG | 0.539677 | 5_3:+17048191 | None:intergenic |
| AAGAGAAATTCTATGGTTCA+AGG | 0.541072 | 5_3:-17045749 | Msa0802590:intron |
| TGTGCAACCATTATACGCAT+TGG | 0.543058 | 5_3:-17047645 | Msa0802590:CDS |
| AGTGCGAAAAGTAACCTTAG+TGG | 0.548121 | 5_3:+17044883 | None:intergenic |
| ATGTTGCAAGCAGCAAAGCA+TGG | 0.548691 | 5_3:-17046039 | Msa0802590:CDS |
| AACCCATATCCACTACCACT+TGG | 0.557493 | 5_3:+17047602 | None:intergenic |
| AAGTGTGATTTGTGGGCAAG+AGG | 0.558162 | 5_3:+17047680 | None:intergenic |
| TCTTGTTAGAAACTATCTTG+TGG | 0.559427 | 5_3:-17049371 | None:intergenic |
| AGAAACTATCTTGTGGGACA+TGG | 0.562860 | 5_3:-17049364 | Msa0802590:CDS |
| AGAAACCACAGAGAAGAAAA+GGG | 0.563826 | 5_3:+17044855 | None:intergenic |
| ACCTTGCTCAATATCTGGAT+CGG | 0.564323 | 5_3:+17049138 | None:intergenic |
| TGTTGCAAGCAGCAAAGCAT+GGG | 0.564523 | 5_3:-17046038 | Msa0802590:CDS |
| GCTTTAATTTGCAGGTGTGG+TGG | 0.564757 | 5_3:-17048316 | Msa0802590:intron |
| ACTTGAAAATCTCAAGGAAG+AGG | 0.567742 | 5_3:+17044713 | None:intergenic |
| TAAGGAATCAGAACTTAGAG+AGG | 0.568613 | 5_3:-17046079 | Msa0802590:CDS |
| GCCGATGATAATTATCGCAA+TGG | 0.574637 | 5_3:-17047862 | Msa0802590:intron |
| TGAAGAAATTGGTGAAGGAA+GGG | 0.574748 | 5_3:-17048128 | Msa0802590:CDS |
| CAGCTCAGCAACAAGAGCTA+GGG | 0.580236 | 5_3:+17048062 | None:intergenic |
| AAATGGGCAAAAGATACAGC+TGG | 0.580445 | 5_3:-17045138 | Msa0802590:CDS |
| TTATCTATGAAGACCAATGA+TGG | 0.582929 | 5_3:-17047970 | Msa0802590:CDS |
| TAAGAAAATATCACGGTCAG+AGG | 0.584733 | 5_3:-17047998 | Msa0802590:CDS |
| TGCGGTAGTTGCTGGGCACG+AGG | 0.589759 | 5_3:-17048157 | Msa0802590:CDS |
| TCTCTTCATTGGAATCCTAA+CGG | 0.591072 | 5_3:-17044941 | Msa0802590:CDS |
| CTGTAGACTTGAAAATCTCA+AGG | 0.594097 | 5_3:+17044707 | None:intergenic |
| GCAGCTTTCACTGTCCCTGG+TGG | 0.601445 | 5_3:-17045069 | Msa0802590:CDS |
| AGGAAGAGGCGCAATTGTGA+CGG | 0.607133 | 5_3:+17044727 | None:intergenic |
| AGTATATTGAGAGCGGTGAG+TGG | 0.609550 | 5_3:-17048260 | Msa0802590:CDS |
| ACCATTGCGATAATTATCAT+CGG | 0.609954 | 5_3:+17047861 | None:intergenic |
| TAGAACGATAACAGGAACAC+TGG | 0.611619 | 5_3:+17044753 | None:intergenic |
| AACTACCGCAACGTGAAGAA+CGG | 0.612033 | 5_3:+17048170 | None:intergenic |
| AATTGCCAAATGCGTCTACA+CGG | 0.612652 | 5_3:+17045848 | None:intergenic |
| TTAGGATTCCAATGAAGAGA+AGG | 0.614556 | 5_3:+17044944 | None:intergenic |
| GCCGATCCAGATATTGAGCA+AGG | 0.614842 | 5_3:-17049139 | Msa0802590:intron |
| ATGCCTTCTGTGTTTCCAAG+TGG | 0.615562 | 5_3:-17047617 | Msa0802590:CDS |
| TGCAACTGTAAATGGACGGA+AGG | 0.618113 | 5_3:-17045884 | Msa0802590:CDS |
| CTTGTGGGACATGGTCTGTG+GGG | 0.619674 | 5_3:-17049355 | Msa0802590:CDS |
| CTACCACTTGGAAACACAGA+AGG | 0.622603 | 5_3:+17047614 | None:intergenic |
| AAGAACGGTCCTCCCCATAG+AGG | 0.622685 | 5_3:+17048185 | None:intergenic |
| AATTGTGAAGAAATTGGTGA+AGG | 0.625256 | 5_3:-17048133 | Msa0802590:CDS |
| ATATCCTGCCAAGTGCAACA+TGG | 0.627952 | 5_3:+17045825 | None:intergenic |
| GGTGGAAACAATCAAGACAA+TGG | 0.629811 | 5_3:-17045051 | Msa0802590:CDS |
| ATGATGCAACTGTAAATGGA+CGG | 0.638038 | 5_3:-17045888 | Msa0802590:CDS |
| CATATCATTCAACTAACATG+TGG | 0.643061 | 5_3:-17049250 | Msa0802590:CDS |
| CAAGGAGCTGGTGAAAGCTG+GGG | 0.651622 | 5_3:-17045163 | Msa0802590:intron |
| TGTCTTGATTGTTTCCACCA+GGG | 0.652150 | 5_3:+17045055 | None:intergenic |
| GAGGACCGTTCTTCACGTTG+CGG | 0.655029 | 5_3:-17048175 | Msa0802590:CDS |
| GTGATGTCGTGCAAGAACAA+GGG | 0.659099 | 5_3:+17045024 | None:intergenic |
| ATTCCACATCCTCTATGGGG+AGG | 0.660094 | 5_3:-17048194 | Msa0802590:CDS |
| TAGCAGCAGCAAGAAGAACA+GGG | 0.665135 | 5_3:+17047941 | None:intergenic |
| TTGGAACAGGAAGAATGGGA+AGG | 0.668429 | 5_3:-17049278 | Msa0802590:CDS |
| TATTTCAAGAGCTACACGGT+AGG | 0.669157 | 5_3:+17046134 | None:intergenic |
| GTGAAAATGAAAGACAATCG+AGG | 0.669964 | 5_3:-17048093 | Msa0802590:intron |
| TCATCGGCCAGGTCTTCCAA+CGG | 0.671668 | 5_3:+17047877 | None:intergenic |
| TGGTATATAAGAAAATATCA+CGG | 0.677081 | 5_3:-17048005 | Msa0802590:CDS |
| CTACGATCAAGATCAGAGGA+AGG | 0.678354 | 5_3:+17045796 | None:intergenic |
| CTGCACAAGTATATTGAGAG+CGG | 0.680709 | 5_3:-17048267 | Msa0802590:CDS |
| GGATCTACGATCAAGATCAG+AGG | 0.680818 | 5_3:+17045792 | None:intergenic |
| TCAATATTTCAAGAGCTACA+CGG | 0.684421 | 5_3:+17046130 | None:intergenic |
| GGTCTTCCAACGGTGTACAA+CGG | 0.687225 | 5_3:+17047887 | None:intergenic |
| TATATTCCACATCCTCTATG+GGG | 0.688060 | 5_3:-17048197 | Msa0802590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTAAATACTTATAATATT+AGG | - | chr5_3:17045655-17045674 | Msa0802590:intron | 10.0% |
| !! | CTTAAATACTTATAATATTA+GGG | - | chr5_3:17045656-17045675 | Msa0802590:intron | 10.0% |
| !! | ACTTTATAAAAGAAATTTAA+AGG | - | chr5_3:17046694-17046713 | Msa0802590:intron | 10.0% |
| !! | TTATTAAACAGTAAAAGTTT+AGG | - | chr5_3:17045499-17045518 | Msa0802590:intron | 15.0% |
| !!! | ATTCAAATGTACTTATTTTT+GGG | + | chr5_3:17045592-17045611 | None:intergenic | 15.0% |
| !!! | TATTCAAATGTACTTATTTT+TGG | + | chr5_3:17045593-17045612 | None:intergenic | 15.0% |
| !!! | ACTGAATTTTAATTAAATTG+AGG | - | chr5_3:17046269-17046288 | Msa0802590:intron | 15.0% |
| !!! | CTGAATTTTAATTAAATTGA+GGG | - | chr5_3:17046270-17046289 | Msa0802590:intron | 15.0% |
| !! | ATTTAAAGGTGATTTATAAA+AGG | - | chr5_3:17046708-17046727 | Msa0802590:intron | 15.0% |
| !! | TTTAAAGGTGATTTATAAAA+GGG | - | chr5_3:17046709-17046728 | Msa0802590:intron | 15.0% |
| !!! | CAAAAGTTTGTATTTTATAA+AGG | + | chr5_3:17046751-17046770 | None:intergenic | 15.0% |
| !! | TACTTCCAATAATATATTAA+AGG | - | chr5_3:17046827-17046846 | Msa0802590:intron | 15.0% |
| !! | AAACTCCTTTAATATATTAT+TGG | + | chr5_3:17046835-17046854 | None:intergenic | 15.0% |
| !!! | TTATTAATCCTTGTTTAAAT+AGG | - | chr5_3:17047761-17047780 | Msa0802590:intron | 15.0% |
| !! | TAATTAATTAATCACAAAGA+GGG | + | chr5_3:17047839-17047858 | None:intergenic | 15.0% |
| !! | TTAATTAATTAATCACAAAG+AGG | + | chr5_3:17047840-17047859 | None:intergenic | 15.0% |
| !!! | AAAAACTAAATTTGAAATTC+TGG | - | chr5_3:17048597-17048616 | Msa0802590:intron | 15.0% |
| !! | TACACATTAATCTATTCTTT+GGG | - | chr5_3:17044965-17044984 | Msa0802590:CDS | 20.0% |
| !! | AACTATGTCTAATATGTATA+GGG | + | chr5_3:17045007-17045026 | None:intergenic | 20.0% |
| !! | AAACTATGTCTAATATGTAT+AGG | + | chr5_3:17045008-17045027 | None:intergenic | 20.0% |
| !! | TAGTTTCTAAATGTATTGAA+AGG | - | chr5_3:17045022-17045041 | Msa0802590:CDS | 20.0% |
| !!! | ACACTTTATTTATTATCAAG+TGG | + | chr5_3:17045241-17045260 | None:intergenic | 20.0% |
| !!! | CAATAAGGAAAGATTTTTAA+AGG | - | chr5_3:17045394-17045413 | Msa0802590:intron | 20.0% |
| !! | TTATAACTAAGAACAATCAA+CGG | - | chr5_3:17045538-17045557 | Msa0802590:intron | 20.0% |
| !!! | TTTGAATATTGTGATTTTAG+TGG | - | chr5_3:17045605-17045624 | Msa0802590:intron | 20.0% |
| !!! | TTGAATATTGTGATTTTAGT+GGG | - | chr5_3:17045606-17045625 | Msa0802590:intron | 20.0% |
| !!! | CATTTATTTTCCTTACTAAT+TGG | + | chr5_3:17045683-17045702 | None:intergenic | 20.0% |
| !! | CAATTAGTAAGGAAAATAAA+TGG | - | chr5_3:17045681-17045700 | Msa0802590:intron | 20.0% |
| !! | TGGTATATAAGAAAATATCA+CGG | - | chr5_3:17046052-17046071 | Msa0802590:CDS | 20.0% |
| !!! | TTTTACGCATTTTTTTTTTC+AGG | - | chr5_3:17047657-17047676 | Msa0802590:CDS | 20.0% |
| !! | TAAACAAGGATTAATAAACA+AGG | + | chr5_3:17047758-17047777 | None:intergenic | 20.0% |
| !! | CTAATATACCTATTTAAACA+AGG | + | chr5_3:17047772-17047791 | None:intergenic | 20.0% |
| !! | AATTAATTAATCACAAAGAG+GGG | + | chr5_3:17047838-17047857 | None:intergenic | 20.0% |
| !!! | TCAAATTTAGTTTTTGAAGT+TGG | + | chr5_3:17048592-17048611 | None:intergenic | 20.0% |
| !! | ATACATGACATTTAAATAAG+TGG | - | chr5_3:17048660-17048679 | Msa0802590:intron | 20.0% |
| !! | ATGAATAAGATAATAATGTG+TGG | + | chr5_3:17048718-17048737 | None:intergenic | 20.0% |
| ! | GTACACATTAATCTATTCTT+TGG | - | chr5_3:17044964-17044983 | Msa0802590:CDS | 25.0% |
| ! | ATAAATAAAGTGTGTGAATG+AGG | - | chr5_3:17045248-17045267 | Msa0802590:intron | 25.0% |
| ! | ATTGTATGAGATGTTACAAA+TGG | - | chr5_3:17045329-17045348 | Msa0802590:intron | 25.0% |
| !!! | TAAGGAAAGATTTTTAAAGG+AGG | - | chr5_3:17045397-17045416 | Msa0802590:intron | 25.0% |
| ! | AGCTAATGTTTATTAGCAAT+AGG | - | chr5_3:17045421-17045440 | Msa0802590:intron | 25.0% |
| ! | ATGTTTATTAGCAATAGGTA+AGG | - | chr5_3:17045426-17045445 | Msa0802590:intron | 25.0% |
| ! | TGTTTATTAGCAATAGGTAA+GGG | - | chr5_3:17045427-17045446 | Msa0802590:intron | 25.0% |
| ! | TAGTTATAACGCTTAAGATT+GGG | + | chr5_3:17045527-17045546 | None:intergenic | 25.0% |
| ! | TTAGTTATAACGCTTAAGAT+TGG | + | chr5_3:17045528-17045547 | None:intergenic | 25.0% |
| ! | TCGATTCAATATTGTATCTT+AGG | - | chr5_3:17046317-17046336 | Msa0802590:intron | 25.0% |
| ! | AATTTGAAAAGTAAGCGAAA+TGG | + | chr5_3:17046534-17046553 | None:intergenic | 25.0% |
| !!! | ATTTCGCTTACTTTTCAAAT+TGG | - | chr5_3:17046533-17046552 | Msa0802590:intron | 25.0% |
| !!! | TTTCGCTTACTTTTCAAATT+GGG | - | chr5_3:17046534-17046553 | Msa0802590:intron | 25.0% |
| ! | TGCAAACTTATAATGTTACA+CGG | - | chr5_3:17046584-17046603 | Msa0802590:intron | 25.0% |
| !! | TTGTATTTTATAAAGGACAC+TGG | + | chr5_3:17046744-17046763 | None:intergenic | 25.0% |
| ! | AATGAATACTATATGTGTAG+TGG | + | chr5_3:17046797-17046816 | None:intergenic | 25.0% |
| ! | GAGTAAATAATGAATGAGAT+TGG | - | chr5_3:17047059-17047078 | Msa0802590:intron | 25.0% |
| ! | ATGAACACACATATATAACA+GGG | + | chr5_3:17047625-17047644 | None:intergenic | 25.0% |
| ! | TATGAACACACATATATAAC+AGG | + | chr5_3:17047626-17047645 | None:intergenic | 25.0% |
| ! | GAATGATTGTACTTACAATA+AGG | + | chr5_3:17047813-17047832 | None:intergenic | 25.0% |
| !! | TATATTTTCCTTATTCCTGA+TGG | + | chr5_3:17047889-17047908 | None:intergenic | 25.0% |
| ! | TTTATAGATGCAATGAGAAA+GGG | - | chr5_3:17048051-17048070 | Msa0802590:CDS | 25.0% |
| ! | GCCATTGATAAAAATAAAAG+AGG | - | chr5_3:17048093-17048112 | Msa0802590:intron | 25.0% |
| !!! | GCCTCTTTTATTTTTATCAA+TGG | + | chr5_3:17048097-17048116 | None:intergenic | 25.0% |
| ! | AATGTCATGTATCTCAAAAT+TGG | + | chr5_3:17048652-17048671 | None:intergenic | 25.0% |
| !! | CATATTGTGAAATTTTGTGA+AGG | - | chr5_3:17048786-17048805 | Msa0802590:intron | 25.0% |
| CTAAGACTGAATATGAGATT+TGG | - | chr5_3:17044760-17044779 | Msa0802590:CDS | 30.0% | |
| CATATCATTCAACTAACATG+TGG | - | chr5_3:17044807-17044826 | Msa0802590:CDS | 30.0% | |
| CTAATATGAGTAAGATTCTC+TGG | + | chr5_3:17044834-17044853 | None:intergenic | 30.0% | |
| TAAAGAAGCCTGGAATAAAT+TGG | - | chr5_3:17044869-17044888 | Msa0802590:CDS | 30.0% | |
| AAAGAAGCCTGGAATAAATT+GGG | - | chr5_3:17044870-17044889 | Msa0802590:CDS | 30.0% | |
| TATATACCTTGCTCAATATC+TGG | + | chr5_3:17044927-17044946 | None:intergenic | 30.0% | |
| TGAGATGTTACAAATGGTAT+TGG | - | chr5_3:17045335-17045354 | Msa0802590:intron | 30.0% | |
| AGTTATAACGCTTAAGATTG+GGG | + | chr5_3:17045526-17045545 | None:intergenic | 30.0% | |
| ATATTAGGGTCCAATTAGTA+AGG | - | chr5_3:17045670-17045689 | Msa0802590:intron | 30.0% | |
| !! | ACATACATGCTTTAATTTGC+AGG | - | chr5_3:17045733-17045752 | Msa0802590:intron | 30.0% |
| ATGCAAACTCGTTTATTAAG+AGG | - | chr5_3:17045824-17045843 | Msa0802590:CDS | 30.0% | |
| TGCAAACTCGTTTATTAAGA+GGG | - | chr5_3:17045825-17045844 | Msa0802590:CDS | 30.0% | |
| AATATATTCCACATCCTCTA+TGG | - | chr5_3:17045858-17045877 | Msa0802590:CDS | 30.0% | |
| ATATATTCCACATCCTCTAT+GGG | - | chr5_3:17045859-17045878 | Msa0802590:CDS | 30.0% | |
| AATTGTGAAGAAATTGGTGA+AGG | - | chr5_3:17045924-17045943 | Msa0802590:intron | 30.0% | |
| TTATCTATGAAGACCAATGA+TGG | - | chr5_3:17046087-17046106 | Msa0802590:CDS | 30.0% | |
| ACCATTGCGATAATTATCAT+CGG | + | chr5_3:17046199-17046218 | None:intergenic | 30.0% | |
| TGTATCACTGCAGAAATATT+TGG | - | chr5_3:17046237-17046256 | Msa0802590:intron | 30.0% | |
| TCAATATTGTATCTTAGGTG+TGG | - | chr5_3:17046322-17046341 | Msa0802590:intron | 30.0% | |
| GGAGATGTTAAATTAAGTGT+TGG | + | chr5_3:17046776-17046795 | None:intergenic | 30.0% | |
| ! | AGAGTTTTACATGATCTGTT+TGG | - | chr5_3:17046868-17046887 | Msa0802590:intron | 30.0% |
| TACATGATCTGTTTGGAAAT+TGG | - | chr5_3:17046875-17046894 | Msa0802590:intron | 30.0% | |
| ! | AGTGAAGTTTGATGAGTTTT+TGG | + | chr5_3:17046948-17046967 | None:intergenic | 30.0% |
| AGACCAACTTTACAAAATTG+AGG | - | chr5_3:17046991-17047010 | Msa0802590:intron | 30.0% | |
| ! | ACTCCTCAATTTTGTAAAGT+TGG | + | chr5_3:17046997-17047016 | None:intergenic | 30.0% |
| !! | GAGTATCGTTCCAATTTTAT+CGG | - | chr5_3:17047013-17047032 | Msa0802590:intron | 30.0% |
| GGTAATCTCAAAACTAAAAG+CGG | + | chr5_3:17047168-17047187 | None:intergenic | 30.0% | |
| !! | AGAGAAGTGCATGAATTTTA+CGG | - | chr5_3:17047192-17047211 | Msa0802590:intron | 30.0% |
| !!! | TTTGTGTTGTTTTTCCTCTT+TGG | + | chr5_3:17047244-17047263 | None:intergenic | 30.0% |
| !! | AAGCTCTAGAAAGAAGAATT+AGG | + | chr5_3:17047297-17047316 | None:intergenic | 30.0% |
| ! | GTTTTTCTACAATATGCGAA+TGG | - | chr5_3:17047336-17047355 | Msa0802590:intron | 30.0% |
| CTGAGGATTATTAATCTTCT+CGG | - | chr5_3:17047364-17047383 | Msa0802590:intron | 30.0% | |
| ! | TCACATGTCATTTCAGAATT+CGG | - | chr5_3:17047698-17047717 | Msa0802590:CDS | 30.0% |
| ! | TTATTCCTGATGGATACAAT+TGG | + | chr5_3:17047879-17047898 | None:intergenic | 30.0% |
| AATTGTATCCATCAGGAATA+AGG | - | chr5_3:17047878-17047897 | Msa0802590:CDS | 30.0% | |
| TCAATATTTCAAGAGCTACA+CGG | + | chr5_3:17047930-17047949 | None:intergenic | 30.0% | |
| CCTTAAACTCTTGAATTCTT+TGG | + | chr5_3:17047963-17047982 | None:intergenic | 30.0% | |
| CCAAAGAATTCAAGAGTTTA+AGG | - | chr5_3:17047960-17047979 | Msa0802590:CDS | 30.0% | |
| GTTTATAGATGCAATGAGAA+AGG | - | chr5_3:17048050-17048069 | Msa0802590:CDS | 30.0% | |
| ATCATGTATGAGTTCGAAAA+CGG | + | chr5_3:17048154-17048173 | None:intergenic | 30.0% | |
| ATACATGATGCAACTGTAAA+TGG | - | chr5_3:17048165-17048184 | Msa0802590:CDS | 30.0% | |
| AGATGCAAAGAGAAATTCTA+TGG | - | chr5_3:17048301-17048320 | Msa0802590:CDS | 30.0% | |
| AAGAGAAATTCTATGGTTCA+AGG | - | chr5_3:17048308-17048327 | Msa0802590:intron | 30.0% | |
| TTTCACAATATGTTATAGCG+CGG | + | chr5_3:17048778-17048797 | None:intergenic | 30.0% | |
| !!! | TTTTTTGCTTCCTTACACTT+GGG | + | chr5_3:17048832-17048851 | None:intergenic | 30.0% |
| !!! | ATTTTTTGCTTCCTTACACT+TGG | + | chr5_3:17048833-17048852 | None:intergenic | 30.0% |
| ! | TCTTTTCACTTCTTCAACTT+CGG | - | chr5_3:17049089-17049108 | Msa0802590:intron | 30.0% |
| ! | CTGAATATGAGATTTGGAAC+AGG | - | chr5_3:17044766-17044785 | Msa0802590:CDS | 35.0% |
| ! | AGATTTGGAACAGGAAGAAT+GGG | - | chr5_3:17044775-17044794 | Msa0802590:CDS | 35.0% |
| TTCATATTGCTAAAGAAGCC+TGG | - | chr5_3:17044859-17044878 | Msa0802590:CDS | 35.0% | |
| ! | TAAGTGTCTTTTGTGAGTCA+TGG | - | chr5_3:17045058-17045077 | Msa0802590:CDS | 35.0% |
| ATTAAGTCCTGTCTCATAGT+CGG | + | chr5_3:17045090-17045109 | None:intergenic | 35.0% | |
| AAGAACAATCAACGGCATTT+AGG | - | chr5_3:17045546-17045565 | Msa0802590:intron | 35.0% | |
| TGTGCAGCGATTTATATTGA+AGG | + | chr5_3:17045777-17045796 | None:intergenic | 35.0% | |
| TATATTCCACATCCTCTATG+GGG | - | chr5_3:17045860-17045879 | Msa0802590:CDS | 35.0% | |
| CGAGGAAATTGTGAAGAAAT+TGG | - | chr5_3:17045918-17045937 | Msa0802590:intron | 35.0% | |
| TGAAGAAATTGGTGAAGGAA+GGG | - | chr5_3:17045929-17045948 | Msa0802590:intron | 35.0% | |
| GTGAAAATGAAAGACAATCG+AGG | - | chr5_3:17045964-17045983 | Msa0802590:CDS | 35.0% | |
| TATAGCGAAGTGTATGACTA+TGG | - | chr5_3:17046032-17046051 | Msa0802590:CDS | 35.0% | |
| TAAGAAAATATCACGGTCAG+AGG | - | chr5_3:17046059-17046078 | Msa0802590:CDS | 35.0% | |
| !! | CATTGGTCTTCATAGATAAC+AGG | + | chr5_3:17046086-17046105 | None:intergenic | 35.0% |
| ! | CGATTCAAAGTGTGATTTGT+GGG | + | chr5_3:17046387-17046406 | None:intergenic | 35.0% |
| CCACAAATCACACTTTGAAT+CGG | - | chr5_3:17046385-17046404 | Msa0802590:intron | 35.0% | |
| ! | CTTTTCAAATTGGGTCATCT+CGG | - | chr5_3:17046543-17046562 | Msa0802590:intron | 35.0% |
| AATTCATGCACTTCTCTTTC+AGG | + | chr5_3:17047189-17047208 | None:intergenic | 35.0% | |
| !! | GAGAAGTGCATGAATTTTAC+GGG | - | chr5_3:17047193-17047212 | Msa0802590:intron | 35.0% |
| TCTTGCAAATATTGCCAAAG+AGG | - | chr5_3:17047227-17047246 | Msa0802590:intron | 35.0% | |
| !! | ATCTTCTCGGTTGTTTCTTT+AGG | - | chr5_3:17047377-17047396 | Msa0802590:intron | 35.0% |
| ! | GTTTCTTTAGGAAGGTTATG+TGG | - | chr5_3:17047389-17047408 | Msa0802590:intron | 35.0% |
| AAGATCACAGATCACAACAA+GGG | + | chr5_3:17047527-17047546 | None:intergenic | 35.0% | |
| AAAGATCACAGATCACAACA+AGG | + | chr5_3:17047528-17047547 | None:intergenic | 35.0% | |
| TCGGTACTATTAAAGTTCTC+TGG | - | chr5_3:17047717-17047736 | Msa0802590:CDS | 35.0% | |
| TAATTAATCACAAAGAGGGG+AGG | + | chr5_3:17047835-17047854 | None:intergenic | 35.0% | |
| TAAGGAATCAGAACTTAGAG+AGG | - | chr5_3:17047978-17047997 | Msa0802590:CDS | 35.0% | |
| ! | TTTTATCAATGGCCCATAAG+AGG | + | chr5_3:17048086-17048105 | None:intergenic | 35.0% |
| ATGATGCAACTGTAAATGGA+CGG | - | chr5_3:17048169-17048188 | Msa0802590:CDS | 35.0% | |
| GCTTATATGTTGGAACAAAG+AGG | - | chr5_3:17048387-17048406 | Msa0802590:intron | 35.0% | |
| GAGAAGAGATTAGAGAGTTT+AGG | - | chr5_3:17048448-17048467 | Msa0802590:intron | 35.0% | |
| GTTGGTTGTGAAGTTGTTAT+AGG | + | chr5_3:17048574-17048593 | None:intergenic | 35.0% | |
| TATAGCGCGGTTAAAATTCA+TGG | + | chr5_3:17048765-17048784 | None:intergenic | 35.0% | |
| ! | TTTTTGCTTCCTTACACTTG+GGG | + | chr5_3:17048831-17048850 | None:intergenic | 35.0% |
| TTAGGATTCCAATGAAGAGA+AGG | + | chr5_3:17049116-17049135 | None:intergenic | 35.0% | |
| TCTCTTCATTGGAATCCTAA+CGG | - | chr5_3:17049116-17049135 | Msa0802590:intron | 35.0% | |
| AGAAACCACAGAGAAGAAAA+GGG | + | chr5_3:17049205-17049224 | None:intergenic | 35.0% | |
| TAGAAACCACAGAGAAGAAA+AGG | + | chr5_3:17049206-17049225 | None:intergenic | 35.0% | |
| !! | TTCACTTGCTATGCTCTTAA+AGG | - | chr5_3:17049245-17049264 | Msa0802590:CDS | 35.0% |
| !! | TCACTTGCTATGCTCTTAAA+GGG | - | chr5_3:17049246-17049265 | Msa0802590:CDS | 35.0% |
| ACTTGAAAATCTCAAGGAAG+AGG | + | chr5_3:17049347-17049366 | None:intergenic | 35.0% | |
| CTGTAGACTTGAAAATCTCA+AGG | + | chr5_3:17049353-17049372 | None:intergenic | 35.0% | |
| GTGACCTCTATTCCTGAAAT+TGG | - | chr5_3:17044729-17044748 | Msa0802590:CDS | 40.0% | |
| ! | GAGATTTGGAACAGGAAGAA+TGG | - | chr5_3:17044774-17044793 | Msa0802590:CDS | 40.0% |
| AGTTGCACCCAATTTATTCC+AGG | + | chr5_3:17044880-17044899 | None:intergenic | 40.0% | |
| ACCTTGCTCAATATCTGGAT+CGG | + | chr5_3:17044922-17044941 | None:intergenic | 40.0% | |
| !! | AAAAGAATCGTGTTGACTCG+TGG | - | chr5_3:17045284-17045303 | Msa0802590:intron | 40.0% |
| !! | AAAGAATCGTGTTGACTCGT+GGG | - | chr5_3:17045285-17045304 | Msa0802590:intron | 40.0% |
| TAGGTAAGGGAGAAGCAATA+AGG | - | chr5_3:17045440-17045459 | Msa0802590:intron | 40.0% | |
| AATCAACGGCATTTAGGCTT+TGG | - | chr5_3:17045552-17045571 | Msa0802590:intron | 40.0% | |
| ATCAACGGCATTTAGGCTTT+GGG | - | chr5_3:17045553-17045572 | Msa0802590:intron | 40.0% | |
| !! | CATGCTTTAATTTGCAGGTG+TGG | - | chr5_3:17045738-17045757 | Msa0802590:intron | 40.0% |
| CTGCACAAGTATATTGAGAG+CGG | - | chr5_3:17045790-17045809 | Msa0802590:CDS | 40.0% | |
| GTGAAGAAATTGGTGAAGGA+AGG | - | chr5_3:17045928-17045947 | Msa0802590:intron | 40.0% | |
| CTTCGCTATATTCGTGTTTC+CGG | + | chr5_3:17046022-17046041 | None:intergenic | 40.0% | |
| AACAGGGATTTCACCATCAT+TGG | + | chr5_3:17046103-17046122 | None:intergenic | 40.0% | |
| GCCGATGATAATTATCGCAA+TGG | - | chr5_3:17046195-17046214 | Msa0802590:intron | 40.0% | |
| ! | CTGCAGAAATATTTGGTTCG+TGG | - | chr5_3:17046244-17046263 | Msa0802590:intron | 40.0% |
| CCGATTCAAAGTGTGATTTG+TGG | + | chr5_3:17046388-17046407 | None:intergenic | 40.0% | |
| TGTGCAACCATTATACGCAT+TGG | - | chr5_3:17046412-17046431 | Msa0802590:intron | 40.0% | |
| !! | TTTCCAAGTGGTAGTGGATA+TGG | - | chr5_3:17046452-17046471 | Msa0802590:intron | 40.0% |
| !! | TTCCAAGTGGTAGTGGATAT+GGG | - | chr5_3:17046453-17046472 | Msa0802590:intron | 40.0% |
| TTACTCCTCAATTGTCCCTT+CGG | + | chr5_3:17047045-17047064 | None:intergenic | 40.0% | |
| !! | AAGCGGAAGTAGATTAGTCT+TGG | + | chr5_3:17047151-17047170 | None:intergenic | 40.0% |
| CAACACAAAGCTTCTTTCGT+AGG | - | chr5_3:17047255-17047274 | Msa0802590:intron | 40.0% | |
| CAAAGCTTCTTTCGTAGGTA+TGG | - | chr5_3:17047260-17047279 | Msa0802590:intron | 40.0% | |
| !! | TCTCGGTTGTTTCTTTAGGA+AGG | - | chr5_3:17047381-17047400 | Msa0802590:intron | 40.0% |
| ! | CTTTAGGAAGGTTATGTGGA+CGG | - | chr5_3:17047393-17047412 | Msa0802590:intron | 40.0% |
| TTTATCGCCAGTAAAGCAGT+TGG | - | chr5_3:17047424-17047443 | Msa0802590:intron | 40.0% | |
| TTATCGCCAGTAAAGCAGTT+GGG | - | chr5_3:17047425-17047444 | Msa0802590:intron | 40.0% | |
| AACTTACCCAACTGCTTTAC+TGG | + | chr5_3:17047434-17047453 | None:intergenic | 40.0% | |
| TCTGGATTACAAGACGTATC+CGG | + | chr5_3:17047575-17047594 | None:intergenic | 40.0% | |
| TCTTGTAATCCAGACCCTAA+GGG | - | chr5_3:17047581-17047600 | Msa0802590:CDS | 40.0% | |
| GCTTTGTATTCACACCCTTA+GGG | + | chr5_3:17047598-17047617 | None:intergenic | 40.0% | |
| CACACATATATAACAGGGAC+TGG | + | chr5_3:17047620-17047639 | None:intergenic | 40.0% | |
| ! | TCCTGATGGATACAATTGGA+GGG | + | chr5_3:17047875-17047894 | None:intergenic | 40.0% |
| ! | TTCCTGATGGATACAATTGG+AGG | + | chr5_3:17047876-17047895 | None:intergenic | 40.0% |
| TATTTCAAGAGCTACACGGT+AGG | + | chr5_3:17047926-17047945 | None:intergenic | 40.0% | |
| ATCAGAACTTAGAGAGGCTT+CGG | - | chr5_3:17047984-17048003 | Msa0802590:CDS | 40.0% | |
| ! | GTTCGAAAACGGCTTTTCTA+CGG | + | chr5_3:17048143-17048162 | None:intergenic | 40.0% |
| AATTGCCAAATGCGTCTACA+CGG | + | chr5_3:17048212-17048231 | None:intergenic | 40.0% | |
| TTGCACTTGGCAGGATATTT+AGG | - | chr5_3:17048237-17048256 | Msa0802590:CDS | 40.0% | |
| TGCACTTGGCAGGATATTTA+GGG | - | chr5_3:17048238-17048257 | Msa0802590:CDS | 40.0% | |
| TCTGATCTTGATCGTAGATC+CGG | - | chr5_3:17048267-17048286 | Msa0802590:CDS | 40.0% | |
| ! | GTGAAATTTTGTGAAGGCAG+TGG | - | chr5_3:17048792-17048811 | Msa0802590:intron | 40.0% |
| ! | AAATTTTGTGAAGGCAGTGG+AGG | - | chr5_3:17048795-17048814 | Msa0802590:intron | 40.0% |
| CTTTCTGTAAATAGCTCACG+AGG | + | chr5_3:17048871-17048890 | None:intergenic | 40.0% | |
| GCTATTTACAGAAAGCCACA+AGG | - | chr5_3:17048876-17048895 | Msa0802590:intron | 40.0% | |
| AAATGGGCAAAAGATACAGC+TGG | - | chr5_3:17048919-17048938 | Msa0802590:intron | 40.0% | |
| ! | AGCTGGTTCATTTACTCTTG+TGG | - | chr5_3:17048936-17048955 | Msa0802590:intron | 40.0% |
| TGTCTTGATTGTTTCCACCA+GGG | + | chr5_3:17049005-17049024 | None:intergenic | 40.0% | |
| TTGTCTTGATTGTTTCCACC+AGG | + | chr5_3:17049006-17049025 | None:intergenic | 40.0% | |
| GGTGGAAACAATCAAGACAA+TGG | - | chr5_3:17049006-17049025 | Msa0802590:intron | 40.0% | |
| TCCTTAAGTCATTGCCACTA+AGG | - | chr5_3:17049160-17049179 | Msa0802590:CDS | 40.0% | |
| ACCTTAGTGGCAATGACTTA+AGG | + | chr5_3:17049164-17049183 | None:intergenic | 40.0% | |
| AGTGCGAAAAGTAACCTTAG+TGG | + | chr5_3:17049177-17049196 | None:intergenic | 40.0% | |
| TAGAACGATAACAGGAACAC+TGG | + | chr5_3:17049307-17049326 | None:intergenic | 40.0% | |
| CGCACCAATTTCAGGAATAG+AGG | + | chr5_3:17044736-17044755 | None:intergenic | 45.0% | |
| TTAGAACGCGCACCAATTTC+AGG | + | chr5_3:17044744-17044763 | None:intergenic | 45.0% | |
| TTGGAACAGGAAGAATGGGA+AGG | - | chr5_3:17044779-17044798 | Msa0802590:CDS | 45.0% | |
| GACTAAACCGACTATGAGAC+AGG | - | chr5_3:17045080-17045099 | Msa0802590:CDS | 45.0% | |
| !! | AAGAATCGTGTTGACTCGTG+GGG | - | chr5_3:17045286-17045305 | Msa0802590:intron | 45.0% |
| AAACCTCTCCCAAGATGATG+TGG | - | chr5_3:17045358-17045377 | Msa0802590:intron | 45.0% | |
| AAACCACATCATCTTGGGAG+AGG | + | chr5_3:17045364-17045383 | None:intergenic | 45.0% | |
| TCTCCCAAGATGATGTGGTT+TGG | - | chr5_3:17045363-17045382 | Msa0802590:intron | 45.0% | |
| CTCCCAAGATGATGTGGTTT+GGG | - | chr5_3:17045364-17045383 | Msa0802590:intron | 45.0% | |
| TCCCAAGATGATGTGGTTTG+GGG | - | chr5_3:17045365-17045384 | Msa0802590:intron | 45.0% | |
| TCCCCAAACCACATCATCTT+GGG | + | chr5_3:17045369-17045388 | None:intergenic | 45.0% | |
| !! | GCTTTAATTTGCAGGTGTGG+TGG | - | chr5_3:17045741-17045760 | Msa0802590:intron | 45.0% |
| AGTATATTGAGAGCGGTGAG+TGG | - | chr5_3:17045797-17045816 | Msa0802590:CDS | 45.0% | |
| AACTACCGCAACGTGAAGAA+CGG | + | chr5_3:17045890-17045909 | None:intergenic | 45.0% | |
| TAGCAGCAGCAAGAAGAACA+GGG | + | chr5_3:17046119-17046138 | None:intergenic | 45.0% | |
| TTAGCAGCAGCAAGAAGAAC+AGG | + | chr5_3:17046120-17046139 | None:intergenic | 45.0% | |
| TGTTCTTCTTGCTGCTGCTA+AGG | - | chr5_3:17046119-17046138 | Msa0802590:CDS | 45.0% | |
| GTTCTTCTTGCTGCTGCTAA+GGG | - | chr5_3:17046120-17046139 | Msa0802590:CDS | 45.0% | |
| TCTTTACCGTTGTACACCGT+TGG | - | chr5_3:17046164-17046183 | Msa0802590:CDS | 45.0% | |
| TGCGATAATTATCATCGGCC+AGG | + | chr5_3:17046194-17046213 | None:intergenic | 45.0% | |
| ! | GAGGCATTTGAGGAAATCGT+TGG | + | chr5_3:17046361-17046380 | None:intergenic | 45.0% |
| ! | AAGTGTGATTTGTGGGCAAG+AGG | + | chr5_3:17046380-17046399 | None:intergenic | 45.0% |
| ATGCGTGCCAATGCGTATAA+TGG | + | chr5_3:17046422-17046441 | None:intergenic | 45.0% | |
| ATGCCTTCTGTGTTTCCAAG+TGG | - | chr5_3:17046440-17046459 | Msa0802590:intron | 45.0% | |
| CTACCACTTGGAAACACAGA+AGG | + | chr5_3:17046446-17046465 | None:intergenic | 45.0% | |
| TCTGTGTTTCCAAGTGGTAG+TGG | - | chr5_3:17046446-17046465 | Msa0802590:intron | 45.0% | |
| AACCCATATCCACTACCACT+TGG | + | chr5_3:17046458-17046477 | None:intergenic | 45.0% | |
| TCGGGGACATCCGATAAAAT+TGG | + | chr5_3:17047026-17047045 | None:intergenic | 45.0% | |
| ! | ATTTTATCGGATGTCCCCGA+AGG | - | chr5_3:17047026-17047045 | Msa0802590:intron | 45.0% |
| ! | TTTTATCGGATGTCCCCGAA+GGG | - | chr5_3:17047027-17047046 | Msa0802590:intron | 45.0% |
| TACTCCTCAATTGTCCCTTC+GGG | + | chr5_3:17047044-17047063 | None:intergenic | 45.0% | |
| ATATGCGAATGGCGATTCTG+AGG | - | chr5_3:17047347-17047366 | Msa0802590:intron | 45.0% | |
| GTCTTGTAATCCAGACCCTA+AGG | - | chr5_3:17047580-17047599 | Msa0802590:CDS | 45.0% | |
| ! | GGCTTTGTATTCACACCCTT+AGG | + | chr5_3:17047599-17047618 | None:intergenic | 45.0% |
| TCCCTCCAATTGTATCCATC+AGG | - | chr5_3:17047871-17047890 | Msa0802590:CDS | 45.0% | |
| ATGTTGCAAGCAGCAAAGCA+TGG | - | chr5_3:17048018-17048037 | Msa0802590:CDS | 45.0% | |
| TGTTGCAAGCAGCAAAGCAT+GGG | - | chr5_3:17048019-17048038 | Msa0802590:CDS | 45.0% | |
| AGGGTAATCCTGACCTCTTA+TGG | - | chr5_3:17048070-17048089 | Msa0802590:intron | 45.0% | |
| GGGTAATCCTGACCTCTTAT+GGG | - | chr5_3:17048071-17048090 | Msa0802590:intron | 45.0% | |
| TGCAACTGTAAATGGACGGA+AGG | - | chr5_3:17048173-17048192 | Msa0802590:CDS | 45.0% | |
| AAATGCCGTGTAGACGCATT+TGG | - | chr5_3:17048204-17048223 | Msa0802590:CDS | 45.0% | |
| TGGCAATTCCATGTTGCACT+TGG | - | chr5_3:17048224-17048243 | Msa0802590:CDS | 45.0% | |
| AATTCCATGTTGCACTTGGC+AGG | - | chr5_3:17048228-17048247 | Msa0802590:CDS | 45.0% | |
| ATATCCTGCCAAGTGCAACA+TGG | + | chr5_3:17048235-17048254 | None:intergenic | 45.0% | |
| CTACGATCAAGATCAGAGGA+AGG | + | chr5_3:17048264-17048283 | None:intergenic | 45.0% | |
| GGATCTACGATCAAGATCAG+AGG | + | chr5_3:17048268-17048287 | None:intergenic | 45.0% | |
| TCTCTTTGCATCTGCATAGC+AGG | + | chr5_3:17048294-17048313 | None:intergenic | 45.0% | |
| CATGTATGTATGCGAGTGAG+AGG | + | chr5_3:17048361-17048380 | None:intergenic | 45.0% | |
| CATGCGTGCAGCTTATATGT+TGG | - | chr5_3:17048377-17048396 | Msa0802590:intron | 45.0% | |
| AATTGTGCACCCCAAGTGTA+AGG | - | chr5_3:17048819-17048838 | Msa0802590:intron | 45.0% | |
| GTGATGTCGTGCAAGAACAA+GGG | + | chr5_3:17049036-17049055 | None:intergenic | 45.0% | |
| TGTGATGTCGTGCAAGAACA+AGG | + | chr5_3:17049037-17049056 | None:intergenic | 45.0% | |
| ACTTCGGTCCTTCTCTTCAT+TGG | - | chr5_3:17049105-17049124 | Msa0802590:intron | 45.0% | |
| ! | CATTGCCCTTTTCTTCTCTG+TGG | - | chr5_3:17049197-17049216 | Msa0802590:CDS | 45.0% |
| CATAGCAAGTGAAGCACAGA+AGG | + | chr5_3:17049238-17049257 | None:intergenic | 45.0% | |
| GACGGAACTAGAACGATAAC+AGG | + | chr5_3:17049315-17049334 | None:intergenic | 45.0% | |
| ATCTTGTGGGACATGGTCTG+TGG | - | chr5_3:17044700-17044719 | Msa0802590:CDS | 50.0% | |
| TCTTGTGGGACATGGTCTGT+GGG | - | chr5_3:17044701-17044720 | Msa0802590:CDS | 50.0% | |
| GCCGATCCAGATATTGAGCA+AGG | - | chr5_3:17044918-17044937 | Msa0802590:CDS | 50.0% | |
| !! | AGAATCGTGTTGACTCGTGG+GGG | - | chr5_3:17045287-17045306 | Msa0802590:intron | 50.0% |
| GTCCCCAAACCACATCATCT+TGG | + | chr5_3:17045370-17045389 | None:intergenic | 50.0% | |
| GGTTTGGGGACGAAGCAATA+AGG | - | chr5_3:17045379-17045398 | Msa0802590:intron | 50.0% | |
| !! | AACGGCATTTAGGCTTTGGG+TGG | - | chr5_3:17045556-17045575 | Msa0802590:intron | 50.0% |
| ATTCCACATCCTCTATGGGG+AGG | - | chr5_3:17045863-17045882 | Msa0802590:CDS | 50.0% | |
| TTCACGTTGCGGTAGTTGCT+GGG | - | chr5_3:17045893-17045912 | Msa0802590:CDS | 50.0% | |
| CAGCTCAGCAACAAGAGCTA+GGG | + | chr5_3:17045998-17046017 | None:intergenic | 50.0% | |
| TCAGCTCAGCAACAAGAGCT+AGG | + | chr5_3:17045999-17046018 | None:intergenic | 50.0% | |
| GGTCTTCCAACGGTGTACAA+CGG | + | chr5_3:17046173-17046192 | None:intergenic | 50.0% | |
| TTGTACACCGTTGGAAGACC+TGG | - | chr5_3:17046173-17046192 | Msa0802590:intron | 50.0% | |
| !! | TTGTGGGCAAGAGGCATTTG+AGG | + | chr5_3:17046371-17046390 | None:intergenic | 50.0% |
| ACTCCTCAATTGTCCCTTCG+GGG | + | chr5_3:17047043-17047062 | None:intergenic | 50.0% | |
| TCACAACAAGGGTTCGCACA+AGG | + | chr5_3:17047516-17047535 | None:intergenic | 50.0% | |
| TCCGTTTGTGTGCTTTGCAC+CGG | - | chr5_3:17047553-17047572 | Msa0802590:intron | 50.0% | |
| TCCGGTGCAAAGCACACAAA+CGG | + | chr5_3:17047557-17047576 | None:intergenic | 50.0% | |
| GTATTCACACCCTTAGGGTC+TGG | + | chr5_3:17047593-17047612 | None:intergenic | 50.0% | |
| TCAATGGCCCATAAGAGGTC+AGG | + | chr5_3:17048081-17048100 | None:intergenic | 50.0% | |
| TTGCATCTGCATAGCAGGAC+CGG | + | chr5_3:17048289-17048308 | None:intergenic | 50.0% | |
| TACAGAAAGCCACAAGGAGC+TGG | - | chr5_3:17048882-17048901 | Msa0802590:intron | 50.0% | |
| ACAAGGAGCTGGTGAAAGCT+GGG | - | chr5_3:17048893-17048912 | Msa0802590:intron | 50.0% | |
| TGGTGAAAGCTGGGGAGAAA+TGG | - | chr5_3:17048902-17048921 | Msa0802590:intron | 50.0% | |
| GGTGAAAGCTGGGGAGAAAT+GGG | - | chr5_3:17048903-17048922 | Msa0802590:intron | 50.0% | |
| TTTCAGCGTAACGAGCCGTT+AGG | + | chr5_3:17049134-17049153 | None:intergenic | 50.0% | |
| ! | AGGAAGAGGCGCAATTGTGA+CGG | + | chr5_3:17049333-17049352 | None:intergenic | 50.0% |
| CTTGTGGGACATGGTCTGTG+GGG | - | chr5_3:17044702-17044721 | Msa0802590:CDS | 55.0% | |
| AAGAACGGTCCTCCCCATAG+AGG | + | chr5_3:17045875-17045894 | None:intergenic | 55.0% | |
| GAGGACCGTTCTTCACGTTG+CGG | - | chr5_3:17045882-17045901 | Msa0802590:CDS | 55.0% | |
| CTTCACGTTGCGGTAGTTGC+TGG | - | chr5_3:17045892-17045911 | Msa0802590:CDS | 55.0% | |
| GCTCTTGTTGCTGAGCTGAC+CGG | - | chr5_3:17046000-17046019 | Msa0802590:CDS | 55.0% | |
| TCATCGGCCAGGTCTTCCAA+CGG | + | chr5_3:17046183-17046202 | None:intergenic | 55.0% | |
| TGTCCCCGAAGGGACAATTG+AGG | - | chr5_3:17047037-17047056 | Msa0802590:intron | 55.0% | |
| CAGCTTTCACCAGCTCCTTG+TGG | + | chr5_3:17048894-17048913 | None:intergenic | 55.0% | |
| CACAAGGAGCTGGTGAAAGC+TGG | - | chr5_3:17048892-17048911 | Msa0802590:intron | 55.0% | |
| CAAGGAGCTGGTGAAAGCTG+GGG | - | chr5_3:17048894-17048913 | Msa0802590:intron | 55.0% | |
| GGTCCTCCCCATAGAGGATG+TGG | + | chr5_3:17045869-17045888 | None:intergenic | 60.0% | |
| GCTGCAGCTTTCACTGTCCC+TGG | - | chr5_3:17048985-17049004 | Msa0802590:intron | 60.0% | |
| GCAGCTTTCACTGTCCCTGG+TGG | - | chr5_3:17048988-17049007 | Msa0802590:intron | 60.0% | |
| TGCGGTAGTTGCTGGGCACG+AGG | - | chr5_3:17045900-17045919 | Msa0802590:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 17044696 | 17049383 | 17044696 | ID=Msa0802590;Name=Msa0802590 |
| chr5_3 | mRNA | 17044696 | 17049383 | 17044696 | ID=Msa0802590-mRNA-1;Parent=Msa0802590;Name=Msa0802590-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|0.16|0.14|7|0|591 |
| chr5_3 | exon | 17049140 | 17049383 | 17049140 | ID=Msa0802590-mRNA-1:exon:7123;Parent=Msa0802590-mRNA-1 |
| chr5_3 | exon | 17048094 | 17048324 | 17048094 | ID=Msa0802590-mRNA-1:exon:7122;Parent=Msa0802590-mRNA-1 |
| chr5_3 | exon | 17047863 | 17048084 | 17047863 | ID=Msa0802590-mRNA-1:exon:7121;Parent=Msa0802590-mRNA-1 |
| chr5_3 | exon | 17047579 | 17047740 | 17047579 | ID=Msa0802590-mRNA-1:exon:7120;Parent=Msa0802590-mRNA-1 |
| chr5_3 | exon | 17045938 | 17046186 | 17045938 | ID=Msa0802590-mRNA-1:exon:7119;Parent=Msa0802590-mRNA-1 |
| chr5_3 | exon | 17045750 | 17045928 | 17045750 | ID=Msa0802590-mRNA-1:exon:7118;Parent=Msa0802590-mRNA-1 |
| chr5_3 | exon | 17044696 | 17045181 | 17044696 | ID=Msa0802590-mRNA-1:exon:7117;Parent=Msa0802590-mRNA-1 |
| chr5_3 | CDS | 17049140 | 17049383 | 17049140 | ID=Msa0802590-mRNA-1:cds;Parent=Msa0802590-mRNA-1 |
| chr5_3 | CDS | 17048094 | 17048324 | 17048094 | ID=Msa0802590-mRNA-1:cds;Parent=Msa0802590-mRNA-1 |
| chr5_3 | CDS | 17047863 | 17048084 | 17047863 | ID=Msa0802590-mRNA-1:cds;Parent=Msa0802590-mRNA-1 |
| chr5_3 | CDS | 17047579 | 17047740 | 17047579 | ID=Msa0802590-mRNA-1:cds;Parent=Msa0802590-mRNA-1 |
| chr5_3 | CDS | 17045938 | 17046186 | 17045938 | ID=Msa0802590-mRNA-1:cds;Parent=Msa0802590-mRNA-1 |
| chr5_3 | CDS | 17045750 | 17045928 | 17045750 | ID=Msa0802590-mRNA-1:cds;Parent=Msa0802590-mRNA-1 |
| chr5_3 | CDS | 17044696 | 17045181 | 17044696 | ID=Msa0802590-mRNA-1:cds;Parent=Msa0802590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
