AlfalfaGEDB | Msa0795340

M. sativa cultivar zhongmu-4 / Msa0795340

KEGG: K03137
GO: GO:0000428 GO:0000988 GO:0000990 GO:0000991 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005673 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141
PFAM: PF02186.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0795340	AES94086.2	98.322	298	5	0	2	299	5	302	0.0	603

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0795340	sp\|Q54KJ8\|T2EB_DICDI	26.442	208	139	6	85	289	63	259	2.79e-14	74.7

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0795340	G7KDE8	98.322	298	5	0	2	299	5	302	0.0	603

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0012200	Msa0795340	0.806512	7.934880e-50	-8.615850e-47
Msa0015090	Msa0795340	0.811819	5.783664e-51	-8.615850e-47
Msa0023330	Msa0795340	0.817914	2.575335e-52	-8.615850e-47
Msa0026630	Msa0795340	0.841233	5.380936e-58	-8.615850e-47
Msa0028620	Msa0795340	0.802851	4.610932e-49	-8.615850e-47
Msa0032080	Msa0795340	0.822357	2.473171e-53	-8.615850e-47
Msa0032470	Msa0795340	0.805443	1.331745e-49	-8.615850e-47
Msa0049750	Msa0795340	0.802779	4.771040e-49	-8.615850e-47
Msa0051960	Msa0795340	0.837985	3.762362e-57	-8.615850e-47
Msa0054920	Msa0795340	0.800541	1.372997e-48	-8.615850e-47
Msa0055640	Msa0795340	0.802821	4.677688e-49	-8.615850e-47
Msa0071250	Msa0795340	0.811692	6.164290e-51	-8.615850e-47
Msa0077380	Msa0795340	0.815701	8.079124e-52	-8.615850e-47
Msa0081620	Msa0795340	0.811068	8.423879e-51	-8.615850e-47
Msa0082420	Msa0795340	0.800227	1.590708e-48	-8.615850e-47
Msa0092410	Msa0795340	0.820186	7.834602e-53	-8.615850e-47
Msa0094710	Msa0795340	0.842652	2.268506e-58	-8.615850e-47
Msa0098290	Msa0795340	0.814661	1.375260e-51	-8.615850e-47
Msa0101860	Msa0795340	0.801074	1.068818e-48	-8.615850e-47
Msa0101960	Msa0795340	0.845307	4.407865e-59	-8.615850e-47
Msa0117520	Msa0795340	0.881669	1.980178e-70	-8.615850e-47
Msa0119090	Msa0795340	0.802877	4.553293e-49	-8.615850e-47
Msa0611540	Msa0795340	-0.800350	1.502189e-48	-8.615850e-47
Msa0613420	Msa0795340	0.825141	5.511473e-54	-8.615850e-47
Msa0624060	Msa0795340	0.806570	7.714645e-50	-8.615850e-47
Msa0641130	Msa0795340	0.848920	4.505132e-60	-8.615850e-47
Msa0661720	Msa0795340	0.800071	1.711621e-48	-8.615850e-47
Msa0673120	Msa0795340	0.843842	1.092297e-58	-8.615850e-47
Msa0676130	Msa0795340	0.805400	1.359559e-49	-8.615850e-47
Msa0676180	Msa0795340	0.811362	7.270910e-51	-8.615850e-47
Msa0685090	Msa0795340	0.802099	6.587968e-49	-8.615850e-47
Msa0689250	Msa0795340	0.808578	2.891620e-50	-8.615850e-47
Msa0693520	Msa0795340	0.803398	3.552483e-49	-8.615850e-47
Msa0703810	Msa0795340	0.800447	1.435455e-48	-8.615850e-47
Msa0705990	Msa0795340	0.803904	2.790163e-49	-8.615850e-47
Msa0712250	Msa0795340	0.825276	5.121365e-54	-8.615850e-47
Msa0713380	Msa0795340	0.833031	6.735511e-56	-8.615850e-47
Msa0714760	Msa0795340	0.804348	2.255057e-49	-8.615850e-47
Msa0741070	Msa0795340	0.805403	1.357907e-49	-8.615850e-47
Msa0743930	Msa0795340	0.800671	1.292185e-48	-8.615850e-47
Msa0750850	Msa0795340	0.817575	3.070997e-52	-8.615850e-47
Msa0753400	Msa0795340	0.825572	4.358280e-54	-8.615850e-47
Msa0758260	Msa0795340	0.804414	2.185299e-49	-8.615850e-47
Msa0795340	Msa0796250	0.820944	5.247198e-53	-8.615850e-47
Msa0795340	Msa0809940	0.810797	9.641866e-51	-8.615850e-47
Msa0795340	Msa0810440	0.803155	3.990417e-49	-8.615850e-47
Msa0795340	Msa0823540	0.839601	1.437074e-57	-8.615850e-47
Msa0795340	Msa0830030	0.807578	4.720552e-50	-8.615850e-47
Msa0795340	Msa0832620	0.839087	1.954447e-57	-8.615850e-47
Msa0795340	Msa0844110	0.818696	1.712953e-52	-8.615850e-47
Msa0795340	Msa0857940	0.819795	9.628548e-53	-8.615850e-47
Msa0795340	Msa0862620	0.836715	7.952490e-57	-8.615850e-47
Msa0795340	Msa0863720	0.805882	1.077051e-49	-8.615850e-47
Msa0795340	Msa0871430	0.809880	1.520106e-50	-8.615850e-47
Msa0795340	Msa0894710	0.817871	2.633485e-52	-8.615850e-47
Msa0795340	Msa0921420	0.804436	2.162431e-49	-8.615850e-47
Msa0795340	Msa0943970	0.808102	3.652984e-50	-8.615850e-47
Msa0795340	Msa0944020	0.802624	5.135486e-49	-8.615850e-47
Msa0795340	Msa0975320	0.802501	5.446071e-49	-8.615850e-47
Msa0795340	Msa1008390	0.807291	5.430466e-50	-8.615850e-47
Msa0795340	Msa1008400	0.803303	3.717161e-49	-8.615850e-47
Msa0795340	Msa1009120	0.814661	1.375260e-51	-8.615850e-47
Msa0795340	Msa1011250	0.846521	2.061199e-59	-8.615850e-47
Msa0795340	Msa1013070	0.808242	3.409650e-50	-8.615850e-47
Msa0795340	Msa1023310	0.816409	5.614081e-52	-8.615850e-47
Msa0795340	Msa1026640	0.828381	9.277521e-55	-8.615850e-47
Msa0795340	Msa1029620	0.807093	5.981685e-50	-8.615850e-47
Msa0795340	Msa1031460	0.828969	6.690815e-55	-8.615850e-47
Msa0795340	Msa1062040	0.803931	2.754008e-49	-8.615850e-47
Msa0795340	Msa1063360	0.812983	3.222042e-51	-8.615850e-47
Msa0795340	Msa1068480	0.802285	6.033570e-49	-8.615850e-47
Msa0795340	Msa1070540	0.841932	3.520319e-58	-8.615850e-47
Msa0795340	Msa1089460	0.814421	1.554049e-51	-8.615850e-47
Msa0795340	Msa1101240	0.837964	3.808684e-57	-8.615850e-47
Msa0795340	Msa1107200	0.819501	1.123404e-52	-8.615850e-47
Msa0795340	Msa1107260	0.823499	1.340309e-53	-8.615850e-47
Msa0795340	Msa1109810	0.816667	4.913218e-52	-8.615850e-47
Msa0795340	Msa1122150	0.849448	3.212300e-60	-8.615850e-47
Msa0795340	Msa1137780	0.828327	9.560861e-55	-8.615850e-47
Msa0795340	Msa1140630	0.826805	2.218064e-54	-8.615850e-47
Msa0795340	Msa1150780	0.821105	4.818255e-53	-8.615850e-47
Msa0795340	Msa1150900	0.806776	6.978440e-50	-8.615850e-47
Msa0795340	Msa1160560	0.867348	1.462671e-65	-8.615850e-47
Msa0795340	Msa1168640	0.821574	3.756651e-53	-8.615850e-47
Msa0795340	Msa1173490	0.804644	1.956886e-49	-8.615850e-47
Msa0795340	Msa1196610	-0.800965	1.124881e-48	-8.615850e-47
Msa0795340	Msa1207310	0.825992	3.463360e-54	-8.615850e-47
Msa0795340	Msa1208370	0.813168	2.933488e-51	-8.615850e-47
Msa0795340	Msa1208450	-0.809545	1.794751e-50	-8.615850e-47
Msa0795340	Msa1208990	0.848945	4.435926e-60	-8.615850e-47
Msa0795340	Msa1212050	0.823355	1.448151e-53	-8.615850e-47
Msa0795340	Msa1214170	0.836031	1.187193e-56	-8.615850e-47
Msa0795340	Msa1221330	0.805060	1.601881e-49	-8.615850e-47
Msa0795340	Msa1236110	-0.800011	1.760516e-48	-8.615850e-47
Msa0795340	Msa1236440	0.855771	5.044990e-62	-8.615850e-47
Msa0795340	Msa1257750	0.802165	6.385879e-49	-8.615850e-47
Msa0795340	Msa1260680	0.819396	1.187042e-52	-8.615850e-47
Msa0795340	Msa1272010	0.849218	3.724414e-60	-8.615850e-47
Msa0795340	Msa1272120	0.805915	1.060190e-49	-8.615850e-47
Msa0795340	Msa1275510	0.812848	3.447624e-51	-8.615850e-47
Msa0795340	Msa1277670	0.860545	1.916510e-63	-8.615850e-47
Msa0795340	Msa1291450	0.828260	9.924964e-55	-8.615850e-47
Msa0795340	Msa1312440	0.801904	7.225628e-49	-8.615850e-47
Msa0795340	Msa1325410	-0.809903	1.503510e-50	-8.615850e-47
Msa0795340	Msa1329200	0.811011	8.663543e-51	-8.615850e-47
Msa0795340	Msa1331320	0.803297	3.728934e-49	-8.615850e-47
Msa0795340	Msa1335230	0.801383	9.238660e-49	-8.615850e-47
Msa0795340	Msa1358090	0.836339	9.918618e-57	-8.615850e-47
Msa0795340	Msa1360020	0.834850	2.361276e-56	-8.615850e-47
Msa0795340	Msa1368360	0.804934	1.701917e-49	-8.615850e-47
Msa0795340	Msa1368610	0.825957	3.531242e-54	-8.615850e-47
Msa0795340	Msa1369920	-0.827628	1.408371e-54	-8.615850e-47
Msa0795340	Msa1372240	0.802979	4.337562e-49	-8.615850e-47
Msa0795340	Msa1378410	0.808681	2.748409e-50	-8.615850e-47
Msa0795340	Msa1392790	0.808210	3.464073e-50	-8.615850e-47
Msa0795340	Msa1401990	0.806876	6.647684e-50	-8.615850e-47
Msa0795340	Msa1407760	0.818841	1.588136e-52	-8.615850e-47
Msa0795340	Msa1407880	0.803771	2.973169e-49	-8.615850e-47
Msa0795340	Msa1419840	0.856353	3.408185e-62	-8.615850e-47
Msa0795340	Msa1423540	0.805333	1.404063e-49	-8.615850e-47
Msa0795340	Msa1423820	0.802052	6.735564e-49	-8.615850e-47
Msa0795340	Msa1430550	0.815021	1.144287e-51	-8.615850e-47
Msa0795340	Msa1437330	0.816079	6.652722e-52	-8.615850e-47
Msa0795340	Msa1437730	0.829406	5.241558e-55	-8.615850e-47
Msa0795340	Msa1450440	0.807235	5.582278e-50	-8.615850e-47
Msa0124320	Msa0795340	0.817218	3.696711e-52	-8.615850e-47
Msa0138020	Msa0795340	0.827866	1.234573e-54	-8.615850e-47
Msa0144530	Msa0795340	0.821110	4.806206e-53	-8.615850e-47
Msa0152560	Msa0795340	0.808209	3.465782e-50	-8.615850e-47
Msa0160960	Msa0795340	0.843550	1.308294e-58	-8.615850e-47
Msa0172080	Msa0795340	0.802473	5.517508e-49	-8.615850e-47
Msa0178570	Msa0795340	0.803119	4.058974e-49	-8.615850e-47
Msa0186320	Msa0795340	0.813710	2.229767e-51	-8.615850e-47
Msa0196670	Msa0795340	0.818969	1.484782e-52	-8.615850e-47
Msa0218370	Msa0795340	0.815156	1.068111e-51	-8.615850e-47
Msa0222980	Msa0795340	0.828865	7.090044e-55	-8.615850e-47
Msa0233370	Msa0795340	0.805374	1.377023e-49	-8.615850e-47
Msa0236420	Msa0795340	0.808634	2.812140e-50	-8.615850e-47
Msa0364790	Msa0795340	0.809365	1.961674e-50	-8.615850e-47
Msa0371950	Msa0795340	0.813816	2.113697e-51	-8.615850e-47
Msa0386010	Msa0795340	0.808945	2.413836e-50	-8.615850e-47
Msa0388730	Msa0795340	0.819724	9.994153e-53	-8.615850e-47
Msa0395750	Msa0795340	0.816128	6.486746e-52	-8.615850e-47
Msa0397270	Msa0795340	0.807793	4.249454e-50	-8.615850e-47
Msa0403470	Msa0795340	-0.807359	5.254668e-50	-8.615850e-47
Msa0431900	Msa0795340	0.828688	7.825105e-55	-8.615850e-47
Msa0456770	Msa0795340	0.800793	1.219729e-48	-8.615850e-47
Msa0457990	Msa0795340	0.827126	1.858250e-54	-8.615850e-47
Msa0470360	Msa0795340	0.802267	6.085087e-49	-8.615850e-47
Msa0470880	Msa0795340	0.812819	3.499034e-51	-8.615850e-47
Msa0240270	Msa0795340	0.815108	1.094781e-51	-8.615850e-47
Msa0264310	Msa0795340	0.825238	5.227803e-54	-8.615850e-47
Msa0269560	Msa0795340	0.830311	3.154590e-55	-8.615850e-47
Msa0270960	Msa0795340	0.805486	1.304495e-49	-8.615850e-47
Msa0277960	Msa0795340	0.802474	5.514211e-49	-8.615850e-47
Msa0278070	Msa0795340	0.810587	1.070150e-50	-8.615850e-47
Msa0278580	Msa0795340	0.826454	2.688869e-54	-8.615850e-47
Msa0287870	Msa0795340	0.800193	1.616251e-48	-8.615850e-47
Msa0302840	Msa0795340	0.806250	9.010823e-50	-8.615850e-47
Msa0305410	Msa0795340	0.816803	4.580282e-52	-8.615850e-47
Msa0307310	Msa0795340	0.808801	2.591239e-50	-8.615850e-47
Msa0308440	Msa0795340	0.816788	4.616179e-52	-8.615850e-47
Msa0316390	Msa0795340	0.869969	2.078803e-66	-8.615850e-47
Msa0317960	Msa0795340	0.814126	1.805396e-51	-8.615850e-47
Msa0319020	Msa0795340	0.804297	2.310868e-49	-8.615850e-47
Msa0333970	Msa0795340	-0.813872	2.053782e-51	-8.615850e-47
Msa0518170	Msa0795340	0.815804	7.660766e-52	-8.615850e-47
Msa0519160	Msa0795340	0.815815	7.619745e-52	-8.615850e-47
Msa0520770	Msa0795340	0.825968	3.509351e-54	-8.615850e-47
Msa0521270	Msa0795340	0.823163	1.605518e-53	-8.615850e-47
Msa0528990	Msa0795340	0.812076	5.084639e-51	-8.615850e-47
Msa0545050	Msa0795340	0.842565	2.392125e-58	-8.615850e-47
Msa0547750	Msa0795340	0.817336	3.476792e-52	-8.615850e-47
Msa0564850	Msa0795340	0.807110	5.931463e-50	-8.615850e-47
Msa0566350	Msa0795340	0.807469	4.977827e-50	-8.615850e-47
Msa0566750	Msa0795340	0.814472	1.514239e-51	-8.615850e-47
Msa0567520	Msa0795340	0.816475	5.424149e-52	-8.615850e-47
Msa0573890	Msa0795340	0.814930	1.198642e-51	-8.615850e-47
Msa0574930	Msa0795340	0.832972	6.966277e-56	-8.615850e-47
Msa0587120	Msa0795340	0.813842	2.085525e-51	-8.615850e-47
Msa0600590	Msa0795340	0.845547	3.794003e-59	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0795340	MtrunA17_Chr5g0397801	100.000	270	0	0	30	299	1	270	0.0	556
Msa0795340	MtrunA17_Chr8g0386401	80.392	204	39	1	94	296	1	204	3.70e-121	345
Msa0795340	MtrunA17_Chr8g0386391	57.576	66	15	1	30	82	1	66	2.04e-14	67.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0795340	AT4G20330.1	64.912	285	82	4	30	299	1	282	3.04e-121	349
Msa0795340	AT4G21010.1	55.036	278	110	6	30	295	1	275	6.36e-93	276

Find 90 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTGCTGTTATTGACTTAA+AGG	0.158931	5_3:+7291098	Msa0795340:CDS
AAACAAGATTCTTAAGTAAA+AGG	0.159439	5_3:+7292821	Msa0795340:three_prime_UTR
TAGCTTACTGCCTCAGGTTT+TGG	0.239321	5_3:+7292721	Msa0795340:three_prime_UTR
CTTCTGGAAATTTGCGTATC+AGG	0.239866	5_3:-7291074	None:intergenic
TCTCCATCGTATCTTACTTT+TGG	0.252078	5_3:-7290872	None:intergenic
AACTGTAATGGAGGACTTAC+AGG	0.272992	5_3:+7291131	Msa0795340:CDS
ATGGGCACTTTAGGATCATT+AGG	0.284072	5_3:-7292328	None:intergenic
AATTCTCGTAGTTTATTTAC+TGG	0.285031	5_3:+7292631	Msa0795340:three_prime_UTR
GGATGACACATTGCAAATTC+AGG	0.289384	5_3:+7292781	Msa0795340:three_prime_UTR
TTCAGGACCATAAAATTATA+TGG	0.311862	5_3:-7293052	None:intergenic
TCAATAACAGCAATGCCTTC+TGG	0.315673	5_3:-7291090	None:intergenic
AGGTCATCATCCACCTTAAT+GGG	0.315953	5_3:-7292346	None:intergenic
ATTACATCACTCTGAAATTC+AGG	0.316206	5_3:-7293069	None:intergenic
TCATTCTTAGGTCCTACTTC+TGG	0.318907	5_3:+7292975	Msa0795340:three_prime_UTR
ACATTGTCCCTCTCATTCTT+AGG	0.322233	5_3:+7292963	Msa0795340:three_prime_UTR
TGAAAGGTGGCAGGGAGATT+TGG	0.323843	5_3:+7292266	Msa0795340:CDS
AACCACCAGAAGAGGGGTTC+TGG	0.326570	5_3:-7292854	None:intergenic
TAGGTCATCATCCACCTTAA+TGG	0.327997	5_3:-7292347	None:intergenic
TCCACCTTAATGGGCACTTT+AGG	0.329618	5_3:-7292337	None:intergenic
AATGACTAAGTTGGCTATCT+TGG	0.349953	5_3:-7292927	None:intergenic
TTTAAATCAAGGGCAGAAAA+TGG	0.358497	5_3:+7292900	Msa0795340:three_prime_UTR
ATAATAAAGATATATCCTTC+TGG	0.363335	5_3:-7292693	None:intergenic
TGATCCTAAAGTGCCCATTA+AGG	0.368344	5_3:+7292333	Msa0795340:CDS
AAATTCAGGGTATTCCTTCC+AGG	0.368853	5_3:+7292795	Msa0795340:three_prime_UTR
TTGACCGGAGCAAGAGCATT+TGG	0.376765	5_3:-7289447	None:intergenic
AACAAGATTCTTAAGTAAAA+GGG	0.380183	5_3:+7292822	Msa0795340:three_prime_UTR
CGCTTCATTTGAGCTCCAAC+AGG	0.397843	5_3:-7289522	None:intergenic
GCTGACTAATGCCCATCTTC+CGG	0.401133	5_3:+7292552	Msa0795340:CDS
ATAGTCGAAACATGCTCTTC+GGG	0.403328	5_3:+7291032	Msa0795340:intron
AAGGAGGAGTGCAGCACAAA+TGG	0.404375	5_3:+7292468	Msa0795340:CDS
GACTCGGCAGGCTTTAACAT+TGG	0.404721	5_3:+7290778	Msa0795340:intron
CTGCTACTAACACTGCAAAA+AGG	0.406009	5_3:+7292449	Msa0795340:CDS
TTATATTGTTTGTTGCCTAT+TGG	0.409041	5_3:+7293012	Msa0795340:three_prime_UTR
ATTAGTCAGCTTGGTCCTCT+TGG	0.410191	5_3:-7292539	None:intergenic
TTGTATTAGCTTACTGCCTC+AGG	0.411602	5_3:+7292715	Msa0795340:three_prime_UTR
TTAAGAATCTTGTTTAATCC+TGG	0.415946	5_3:-7292813	None:intergenic
TATAGTCGAAACATGCTCTT+CGG	0.434439	5_3:+7291031	Msa0795340:intron
CACGCTGAGTTACTTAAATC+AGG	0.434820	5_3:-7292599	None:intergenic
TGGGCACTTTAGGATCATTA+GGG	0.444208	5_3:-7292327	None:intergenic
GATATATCCTTCTGGACAAT+GGG	0.445314	5_3:-7292685	None:intergenic
AGGTCGTATCATTTAAATCA+AGG	0.462906	5_3:+7292889	Msa0795340:three_prime_UTR
TAAGTAACTCAGCGTGTGTT+GGG	0.463094	5_3:+7292606	Msa0795340:three_prime_UTR
GTCTCTTTATTCTCACCAAT+AGG	0.465310	5_3:-7293027	None:intergenic
CATTATTCATTTCCAGAAGT+AGG	0.468259	5_3:-7292987	None:intergenic
TATAGGCTTTGAAAGGTGGC+AGG	0.480454	5_3:+7292257	Msa0795340:intron
GCTGTCCAACTTTGATTCAC+AGG	0.485843	5_3:+7292291	Msa0795340:CDS
GTCTTCCTGTGAATCAAAGT+TGG	0.504653	5_3:-7292296	None:intergenic
GAAATTCAGATGGCGTTACA+AGG	0.505735	5_3:+7289336	Msa0795340:intron
GGATTCATACCCAACTGTAA+TGG	0.506042	5_3:+7291119	Msa0795340:CDS
GGCCAGAACCCCTCTTCTGG+TGG	0.510290	5_3:+7292852	Msa0795340:three_prime_UTR
TTCAGTTTATAGGCTTTGAA+AGG	0.517712	5_3:+7292250	Msa0795340:intron
AGATATATCCTTCTGGACAA+TGG	0.524958	5_3:-7292686	None:intergenic
GATGACACATTGCAAATTCA+GGG	0.531180	5_3:+7292782	Msa0795340:three_prime_UTR
TGTGCCAAATGCTCTTGCTC+CGG	0.535916	5_3:+7289443	Msa0795340:CDS
GAGATTTCCCATTGTCCAGA+AGG	0.536634	5_3:+7292678	Msa0795340:three_prime_UTR
GAATCTTGTTTAATCCTGGA+AGG	0.542161	5_3:-7292809	None:intergenic
TTAAGTAACTCAGCGTGTGT+TGG	0.543699	5_3:+7292605	Msa0795340:three_prime_UTR
TGTAAGTCCTCCATTACAGT+TGG	0.544872	5_3:-7291129	None:intergenic
ATCAAGCATAGCAGCAAACA+AGG	0.552309	5_3:+7289407	Msa0795340:CDS
GGTCGTATCATTTAAATCAA+GGG	0.554513	5_3:+7292890	Msa0795340:three_prime_UTR
TTGCAATGTGTCATCCACTC+TGG	0.556144	5_3:-7292774	None:intergenic
ATGTTGAAGTCTCTCTGTAT+CGG	0.571558	5_3:-7289478	None:intergenic
ACTCTGCTAAATGACTAAGT+TGG	0.574081	5_3:-7292936	None:intergenic
GTGATATGATTGATATAGAG+AGG	0.575017	5_3:+7292401	Msa0795340:CDS
AGTATTCGTAAAGCTCCTGT+TGG	0.575171	5_3:+7289507	Msa0795340:CDS
AAGTAGGACCTAAGAATGAG+AGG	0.577350	5_3:-7292971	None:intergenic
AAGATGGGCATTAGTCAGCT+TGG	0.579562	5_3:-7292548	None:intergenic
CTTAAGTAAAAGGGCAAAGG+TGG	0.580077	5_3:+7292831	Msa0795340:three_prime_UTR
CTGATACGCAAATTTCCAGA+AGG	0.581325	5_3:+7291075	Msa0795340:CDS
AGTTTATAGGCTTTGAAAGG+TGG	0.583829	5_3:+7292253	Msa0795340:intron
ATTCTTAAGTAAAAGGGCAA+AGG	0.590714	5_3:+7292828	Msa0795340:three_prime_UTR
TCCTAAAGTGCCCATTAAGG+TGG	0.592622	5_3:+7292336	Msa0795340:CDS
TGGAGAAAGATTCTCTTACA+AGG	0.595910	5_3:+7290889	Msa0795340:CDS
AGTAGGACCTAAGAATGAGA+GGG	0.596404	5_3:-7292970	None:intergenic
AATCCAAAAGTAAGATACGA+TGG	0.596900	5_3:+7290869	Msa0795340:CDS
TGTTAGCTTTCATGTCCACA+TGG	0.600643	5_3:-7290820	None:intergenic
GTAAGTCCTCCATTACAGTT+GGG	0.602392	5_3:-7291128	None:intergenic
AGGAGTGCAGCACAAATGGA+AGG	0.606142	5_3:+7292472	Msa0795340:CDS
GTATCGGTCGAAAATTTGAC+CGG	0.607296	5_3:-7289462	None:intergenic
CACTTTAGGATCATTAGGGT+AGG	0.617730	5_3:-7292323	None:intergenic
TTCATACCCAACTGTAATGG+AGG	0.622275	5_3:+7291122	Msa0795340:CDS
ATCTGTGACGAACTTAATCA+CGG	0.627547	5_3:+7288950	Msa0795340:CDS
TGATATGATTGATATAGAGA+GGG	0.634684	5_3:+7292402	Msa0795340:CDS
ATAGGCTTTGAAAGGTGGCA+GGG	0.637475	5_3:+7292258	Msa0795340:intron
ACAAATATGTCCAAAACCTG+AGG	0.646913	5_3:-7292731	None:intergenic
AATAAATGAAACATGCCATG+TGG	0.663478	5_3:+7290805	Msa0795340:CDS
AAATCAAGGGCAGAAAATGG+CGG	0.672302	5_3:+7292903	Msa0795340:three_prime_UTR
GAAGAATCAACTTTCCAGAG+TGG	0.675018	5_3:+7292760	Msa0795340:three_prime_UTR
AGAAGAATGAAATCACCAAG+AGG	0.680362	5_3:+7292524	Msa0795340:CDS
TCTATATCAATCATATCACG+AGG	0.737039	5_3:-7292397	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTAATACTTTTTATTATAAC+CGG	-	chr5_3:7290404-7290423	None:intergenic	10.0%
!!!	GTTATAATAAAAAGTATTAA+TGG	+	chr5_3:7290404-7290423	Msa0795340:intron	10.0%
!!	TTCTAATAATATTTATAAGA+TGG	-	chr5_3:7290468-7290487	None:intergenic	10.0%
!!	TAAAATATAATAGACAAATA+TGG	+	chr5_3:7291427-7291446	Msa0795340:intron	10.0%
!!	TTTATATTTGTTTAGTTATA+GGG	-	chr5_3:7291784-7291803	None:intergenic	10.0%
!!	ATTTATATTTGTTTAGTTAT+AGG	-	chr5_3:7291785-7291804	None:intergenic	10.0%
!!	TAAAAATAATATCAACTTGT+GGG	-	chr5_3:7289604-7289623	None:intergenic	15.0%
!!	ATAAAAATAATATCAACTTG+TGG	-	chr5_3:7289605-7289624	None:intergenic	15.0%
!!!	ACAAGTTGATATTATTTTTA+TGG	+	chr5_3:7289604-7289623	Msa0795340:intron	15.0%
!!!	TAATACTTTTTATTATAACC+GGG	-	chr5_3:7290403-7290422	None:intergenic	15.0%
!!	AACTTATATTTATATTGTTG+TGG	-	chr5_3:7291488-7291507	None:intergenic	15.0%
!!!	TTATTGGTTAATATTTATGT+TGG	-	chr5_3:7291998-7292017	None:intergenic	15.0%
!!	TCAAAATTTAGGTATATAAT+TGG	+	chr5_3:7292197-7292216	Msa0795340:intron	15.0%
!!	ATCGAGAAAGTAATAATAAT+CGG	-	chr5_3:7289050-7289069	None:intergenic	20.0%
!!!	TGAAATTTGATTTTTGTGAT+CGG	-	chr5_3:7289135-7289154	None:intergenic	20.0%
!!!	TTTTATATGCAAAATCAATG+GGG	-	chr5_3:7289261-7289280	None:intergenic	20.0%
!!!	CTTTTATATGCAAAATCAAT+GGG	-	chr5_3:7289262-7289281	None:intergenic	20.0%
!!!	ACTTTTATATGCAAAATCAA+TGG	-	chr5_3:7289263-7289282	None:intergenic	20.0%
!!!	ACAAAATGATCAATTTTTCT+AGG	-	chr5_3:7289291-7289310	None:intergenic	20.0%
!!	TCAAATCAAATCAATTTCTA+GGG	-	chr5_3:7289318-7289337	None:intergenic	20.0%
!!	TTCAAATCAAATCAATTTCT+AGG	-	chr5_3:7289319-7289338	None:intergenic	20.0%
!!!	TTTTATGGTTATGAATACTT+TGG	+	chr5_3:7289619-7289638	Msa0795340:intron	20.0%
!!	TTTATGGTTATGAATACTTT+GGG	+	chr5_3:7289620-7289639	Msa0795340:intron	20.0%
!!	TATCAAAAACCTAGATATTA+AGG	+	chr5_3:7289821-7289840	Msa0795340:intron	20.0%
!!	TAATATTTATAAGATGGCAT+GGG	-	chr5_3:7290462-7290481	None:intergenic	20.0%
!!	ATAATATTTATAAGATGGCA+TGG	-	chr5_3:7290463-7290482	None:intergenic	20.0%
!!	TGTATAAAATATAACCCAAA+GGG	-	chr5_3:7290519-7290538	None:intergenic	20.0%
!!	TTGTATAAAATATAACCCAA+AGG	-	chr5_3:7290520-7290539	None:intergenic	20.0%
!!	TTGTATGTGATGTATAAATA+TGG	+	chr5_3:7290590-7290609	Msa0795340:intron	20.0%
!!!	TTGTATTTTCTTAATAGACT+CGG	+	chr5_3:7290762-7290781	Msa0795340:intron	20.0%
!!	AAATAGTAGTATAAAAGAAG+AGG	-	chr5_3:7290980-7290999	None:intergenic	20.0%
!!!	CTTCTTTTATACTACTATTT+TGG	+	chr5_3:7290980-7290999	Msa0795340:intron	20.0%
!!	AGTCTATACTTATATATTGA+TGG	+	chr5_3:7291722-7291741	Msa0795340:intron	20.0%
!!!	ATTTCATTCTTCTTTTTCTT+AGG	-	chr5_3:7292517-7292536	None:intergenic	20.0%
!!	ATAATAAAGATATATCCTTC+TGG	-	chr5_3:7292696-7292715	None:intergenic	20.0%
!!	AAACAAGATTCTTAAGTAAA+AGG	+	chr5_3:7292821-7292840	Msa0795340:three_prime_UTR	20.0%
!!	AACAAGATTCTTAAGTAAAA+GGG	+	chr5_3:7292822-7292841	Msa0795340:three_prime_UTR	20.0%
!	CTAATGTATTGAAACTTTCT+TGG	-	chr5_3:7289220-7289239	None:intergenic	25.0%
!!!	GATTTGATTTGAAATTCAGA+TGG	+	chr5_3:7289326-7289345	Msa0795340:intron	25.0%
!	AAAACAATCACAGTTAAAAG+TGG	+	chr5_3:7289696-7289715	Msa0795340:intron	25.0%
!	CTGAAATTGTAATTACGTTA+TGG	+	chr5_3:7289783-7289802	Msa0795340:intron	25.0%
!!!	TATACAACTTAGGCTTTTTT+TGG	-	chr5_3:7289957-7289976	None:intergenic	25.0%
!	AAAAAGCCTAAGTTGTATAT+AGG	+	chr5_3:7289958-7289977	Msa0795340:intron	25.0%
!!!	CTTATTTTCATAAACTCTTC+TGG	-	chr5_3:7290111-7290130	None:intergenic	25.0%
!	TCAAATAAGTCTATCTAAAG+AGG	+	chr5_3:7290216-7290235	Msa0795340:intron	25.0%
!	GTTTAATTGGACTAATTTGA+TGG	+	chr5_3:7290334-7290353	Msa0795340:intron	25.0%
!!	TTTTATTATAACCGGGTTAA+TGG	-	chr5_3:7290396-7290415	None:intergenic	25.0%
!	ATTAGGAACAAAATAGCTTA+TGG	-	chr5_3:7290630-7290649	None:intergenic	25.0%
!!!	ATAAGCTATTTTGTTCCTAA+TGG	+	chr5_3:7290629-7290648	Msa0795340:intron	25.0%
!	AAGCACTAAGTAAGTATATA+TGG	-	chr5_3:7290738-7290757	None:intergenic	25.0%
!!!	AAGATGTTTTTGACAATATG+AGG	+	chr5_3:7290843-7290862	Msa0795340:CDS	25.0%
!	GGTAAATTAGATTTAGTAGT+TGG	+	chr5_3:7291152-7291171	Msa0795340:intron	25.0%
!!!	CATTCATTTTTCTGAAACAT+TGG	+	chr5_3:7291192-7291211	Msa0795340:intron	25.0%
!	ACTATTTAAGCTTCTTTCAT+AGG	-	chr5_3:7291366-7291385	None:intergenic	25.0%
!	TAAATAGTCAACACAATTGA+TGG	+	chr5_3:7291378-7291397	Msa0795340:intron	25.0%
!	GATACCATATTGAAGTTATA+GGG	-	chr5_3:7291558-7291577	None:intergenic	25.0%
!	ATATTTGGGAATAATAAGCT+GGG	-	chr5_3:7291624-7291643	None:intergenic	25.0%
!	TATATTTGGGAATAATAAGC+TGG	-	chr5_3:7291625-7291644	None:intergenic	25.0%
!!	GTTATTCTTTTATATGCATG+GGG	-	chr5_3:7291762-7291781	None:intergenic	25.0%
!!	GGTTATTCTTTTATATGCAT+GGG	-	chr5_3:7291763-7291782	None:intergenic	25.0%
!!!	CTGTTTTAGCATGTTTTTAT+TGG	+	chr5_3:7292089-7292108	Msa0795340:intron	25.0%
!!!	TGGTTAGTGATATTTTTTAG+AGG	+	chr5_3:7292164-7292183	Msa0795340:intron	25.0%
!!!	TTAGTGATATTTTTTAGAGG+TGG	+	chr5_3:7292167-7292186	Msa0795340:intron	25.0%
!	TCATAAAGCTTTCAGTTTAT+AGG	+	chr5_3:7292240-7292259	Msa0795340:intron	25.0%
!	TGATATGATTGATATAGAGA+GGG	+	chr5_3:7292402-7292421	Msa0795340:CDS	25.0%
!!	TTCTTCTTTTTCTTAGGTTT+AGG	-	chr5_3:7292511-7292530	None:intergenic	25.0%
!	AATTCTCGTAGTTTATTTAC+TGG	+	chr5_3:7292631-7292650	Msa0795340:three_prime_UTR	25.0%
!!	TTAAGAATCTTGTTTAATCC+TGG	-	chr5_3:7292816-7292835	None:intergenic	25.0%
!!	TTATATTGTTTGTTGCCTAT+TGG	+	chr5_3:7293012-7293031	Msa0795340:three_prime_UTR	25.0%
!!	GAGACTTCCATATAATTTTA+TGG	+	chr5_3:7293045-7293064	Msa0795340:three_prime_UTR	25.0%
!	TTCAGGACCATAAAATTATA+TGG	-	chr5_3:7293055-7293074	None:intergenic	25.0%
	ATGCAGAAAAACAAAGTCTT+TGG	-	chr5_3:7288910-7288929	None:intergenic	30.0%
!!	AGATTTTTCGATATGGAAGA+AGG	-	chr5_3:7288934-7288953	None:intergenic	30.0%
!	TTGATTTTTGTGATCGGAAA+TGG	-	chr5_3:7289129-7289148	None:intergenic	30.0%
	GAACAATTCAATCAAAGAGA+GGG	-	chr5_3:7289162-7289181	None:intergenic	30.0%
	AGAACAATTCAATCAAAGAG+AGG	-	chr5_3:7289163-7289182	None:intergenic	30.0%
!	CGTTATTGATCTTCTTTTTG+AGG	+	chr5_3:7289545-7289564	Msa0795340:CDS	30.0%
	TTGTAATTACGTTATGGTCA+TGG	+	chr5_3:7289789-7289808	Msa0795340:intron	30.0%
	GTATTCTGACCTTAATATCT+AGG	-	chr5_3:7289833-7289852	None:intergenic	30.0%
	GACAATGCATAAAATATGCA+AGG	+	chr5_3:7289906-7289925	Msa0795340:intron	30.0%
	TGCATAAAATATGCAAGGTT+CGG	+	chr5_3:7289911-7289930	Msa0795340:intron	30.0%
!	TTAAGTTGCTTATCCATACA+GGG	-	chr5_3:7289984-7290003	None:intergenic	30.0%
!	ATTAAGTTGCTTATCCATAC+AGG	-	chr5_3:7289985-7290004	None:intergenic	30.0%
	AATAAGCTGAAAACACCTTA+TGG	+	chr5_3:7290125-7290144	Msa0795340:intron	30.0%
	AAGTACTAGTGAAACTGTTT+GGG	-	chr5_3:7290180-7290199	None:intergenic	30.0%
	TAAGTACTAGTGAAACTGTT+TGG	-	chr5_3:7290181-7290200	None:intergenic	30.0%
	AGAAGAAACAATCTCAGTAT+AGG	-	chr5_3:7290296-7290315	None:intergenic	30.0%
!	ACTAATTTGATGGATGACTT+TGG	+	chr5_3:7290344-7290363	Msa0795340:intron	30.0%
	GAAGAAACTACTTGTACTTT+AGG	+	chr5_3:7290485-7290504	Msa0795340:intron	30.0%
	AATAAATGAAACATGCCATG+TGG	+	chr5_3:7290805-7290824	Msa0795340:CDS	30.0%
	AATCCAAAAGTAAGATACGA+TGG	+	chr5_3:7290869-7290888	Msa0795340:CDS	30.0%
	TGAACAAAATTGAAAGACGA+AGG	-	chr5_3:7290942-7290961	None:intergenic	30.0%
!!	CATTGCTGTTATTGACTTAA+AGG	+	chr5_3:7291098-7291117	Msa0795340:CDS	30.0%
	ATAGTTGCTCAATAAGATCA+AGG	-	chr5_3:7291257-7291276	None:intergenic	30.0%
!!	ATAGTGACTGGTTAGTATTT+TGG	-	chr5_3:7291342-7291361	None:intergenic	30.0%
	TATATGCATAAGATGTTGCA+AGG	+	chr5_3:7291402-7291421	Msa0795340:intron	30.0%
	ATATGCATAAGATGTTGCAA+GGG	+	chr5_3:7291403-7291422	Msa0795340:intron	30.0%
!	GTTAGTCTATCAGATACAAA+GGG	-	chr5_3:7291536-7291555	None:intergenic	30.0%
	CTAACCCTATAACTTCAATA+TGG	+	chr5_3:7291551-7291570	Msa0795340:intron	30.0%
	CGATACCATATTGAAGTTAT+AGG	-	chr5_3:7291559-7291578	None:intergenic	30.0%
	TGTATATGGGATAATAACAC+TGG	-	chr5_3:7291594-7291613	None:intergenic	30.0%
	ATTGTCTATAGGATAAGTCA+GGG	-	chr5_3:7291654-7291673	None:intergenic	30.0%
	TTAGAGCTTAGATTGTCTAT+AGG	-	chr5_3:7291665-7291684	None:intergenic	30.0%
!	GACATTTCAATCATGTTTTG+TGG	+	chr5_3:7291699-7291718	Msa0795340:intron	30.0%
!	GGGTTATTCTTTTATATGCA+TGG	-	chr5_3:7291764-7291783	None:intergenic	30.0%
!!	ACCAATAAAAGAGTGTGTTT+TGG	+	chr5_3:7292010-7292029	Msa0795340:intron	30.0%
!	TCCAAAACACACTCTTTTAT+TGG	-	chr5_3:7292014-7292033	None:intergenic	30.0%
	GTGGTCAATAGTCAAAATTT+AGG	+	chr5_3:7292186-7292205	Msa0795340:intron	30.0%
!!	TTCAGTTTATAGGCTTTGAA+AGG	+	chr5_3:7292250-7292269	Msa0795340:intron	30.0%
	TCTATATCAATCATATCACG+AGG	-	chr5_3:7292400-7292419	None:intergenic	30.0%
	GTGATATGATTGATATAGAG+AGG	+	chr5_3:7292401-7292420	Msa0795340:CDS	30.0%
	ATTCTTAAGTAAAAGGGCAA+AGG	+	chr5_3:7292828-7292847	Msa0795340:three_prime_UTR	30.0%
	AGGTCGTATCATTTAAATCA+AGG	+	chr5_3:7292889-7292908	Msa0795340:three_prime_UTR	30.0%
	GGTCGTATCATTTAAATCAA+GGG	+	chr5_3:7292890-7292909	Msa0795340:three_prime_UTR	30.0%
	TTTAAATCAAGGGCAGAAAA+TGG	+	chr5_3:7292900-7292919	Msa0795340:three_prime_UTR	30.0%
	CATTATTCATTTCCAGAAGT+AGG	-	chr5_3:7292990-7293009	None:intergenic	30.0%
!!	ATTACATCACTCTGAAATTC+AGG	-	chr5_3:7293072-7293091	None:intergenic	30.0%
!!	TCGTCACAGATTTTTCGATA+TGG	-	chr5_3:7288941-7288960	None:intergenic	35.0%
	ATCTGTGACGAACTTAATCA+CGG	+	chr5_3:7288950-7288969	Msa0795340:CDS	35.0%
	ATGTTGAAGTCTCTCTGTAT+CGG	-	chr5_3:7289481-7289500	None:intergenic	35.0%
!	CTTAGTGTTGCTGAAAATTG+TGG	+	chr5_3:7289739-7289758	Msa0795340:intron	35.0%
	GCATAAAATATGCAAGGTTC+GGG	+	chr5_3:7289912-7289931	Msa0795340:intron	35.0%
	CATAAAATATGCAAGGTTCG+GGG	+	chr5_3:7289913-7289932	Msa0795340:intron	35.0%
!!!	ACTTAGGCTTTTTTTGGTAG+TGG	-	chr5_3:7289951-7289970	None:intergenic	35.0%
	ACACCTTATGGACATATCAT+TGG	+	chr5_3:7290137-7290156	Msa0795340:intron	35.0%
	TGGTCATATTATTTCCTCAC+AGG	+	chr5_3:7290364-7290383	Msa0795340:intron	35.0%
	GGTCATATTATTTCCTCACA+GGG	+	chr5_3:7290365-7290384	Msa0795340:intron	35.0%
	TATTATAACCGGGTTAATGG+TGG	-	chr5_3:7290393-7290412	None:intergenic	35.0%
	CATGGGACTATAAATTTGCA+CGG	-	chr5_3:7290445-7290464	None:intergenic	35.0%
!!	TTTAGGTTCTAAAGCCCTTT+GGG	+	chr5_3:7290502-7290521	Msa0795340:intron	35.0%
!!	TCAAAATCACGTTGCTGTTT+AGG	+	chr5_3:7290548-7290567	Msa0795340:intron	35.0%
	TTCCTAATGGTTATTCTGAG+TGG	+	chr5_3:7290642-7290661	Msa0795340:intron	35.0%
!	ATTTTCTTAATAGACTCGGC+AGG	+	chr5_3:7290766-7290785	Msa0795340:intron	35.0%
!	TCTCCATCGTATCTTACTTT+TGG	-	chr5_3:7290875-7290894	None:intergenic	35.0%
	TGGAGAAAGATTCTCTTACA+AGG	+	chr5_3:7290889-7290908	Msa0795340:CDS	35.0%
	TATAGTCGAAACATGCTCTT+CGG	+	chr5_3:7291031-7291050	Msa0795340:intron	35.0%
	CAATAAGATCAAGGTGGTAT+GGG	-	chr5_3:7291248-7291267	None:intergenic	35.0%
	TCAATAAGATCAAGGTGGTA+TGG	-	chr5_3:7291249-7291268	None:intergenic	35.0%
	AAATTCATCGTGCACATGAA+AGG	-	chr5_3:7291301-7291320	None:intergenic	35.0%
!	TCATGTGCACGATGAATTTT+TGG	+	chr5_3:7291302-7291321	Msa0795340:intron	35.0%
!	CATGTGCACGATGAATTTTT+GGG	+	chr5_3:7291303-7291322	Msa0795340:intron	35.0%
	TATTGTTGTGGATGATGAGT+TGG	-	chr5_3:7291476-7291495	None:intergenic	35.0%
!!	GGTTAGTCTATCAGATACAA+AGG	-	chr5_3:7291537-7291556	None:intergenic	35.0%
!	ACTTCAATATGGTATCGAAG+TGG	+	chr5_3:7291562-7291581	Msa0795340:intron	35.0%
	GATTGTCTATAGGATAAGTC+AGG	-	chr5_3:7291655-7291674	None:intergenic	35.0%
!	ATTCTTTTATATGCATGGGG+AGG	-	chr5_3:7291759-7291778	None:intergenic	35.0%
	ATTATTCCTACCCAAAGTCT+CGG	+	chr5_3:7291825-7291844	Msa0795340:intron	35.0%
	AGAGTGTAACTACAAAGAGA+GGG	-	chr5_3:7291889-7291908	None:intergenic	35.0%
	TGGTCCCACTAAATTCATAT+GGG	-	chr5_3:7291978-7291997	None:intergenic	35.0%
	TTGGTCCCACTAAATTCATA+TGG	-	chr5_3:7291979-7291998	None:intergenic	35.0%
!!	AGTTTATAGGCTTTGAAAGG+TGG	+	chr5_3:7292253-7292272	Msa0795340:intron	35.0%
!!!	ACCTAAAACAGCTTTTTCGT+GGG	+	chr5_3:7292365-7292384	Msa0795340:CDS	35.0%
!!!	CAGGCTTCATTCCATTTTTT+TGG	-	chr5_3:7292432-7292451	None:intergenic	35.0%
!	CTTTTTCTTAGGTTTAGGCT+TGG	-	chr5_3:7292506-7292525	None:intergenic	35.0%
	AGAAGAATGAAATCACCAAG+AGG	+	chr5_3:7292524-7292543	Msa0795340:CDS	35.0%
!!	TTCAAGTTCTGAAAAAGCTC+CGG	-	chr5_3:7292574-7292593	None:intergenic	35.0%
	GATATATCCTTCTGGACAAT+GGG	-	chr5_3:7292688-7292707	None:intergenic	35.0%
	AGATATATCCTTCTGGACAA+TGG	-	chr5_3:7292689-7292708	None:intergenic	35.0%
	ACAAATATGTCCAAAACCTG+AGG	-	chr5_3:7292734-7292753	None:intergenic	35.0%
	GATGACACATTGCAAATTCA+GGG	+	chr5_3:7292782-7292801	Msa0795340:three_prime_UTR	35.0%
!	GAATCTTGTTTAATCCTGGA+AGG	-	chr5_3:7292812-7292831	None:intergenic	35.0%
	TTAGAAAAACCACCAGAAGA+GGG	-	chr5_3:7292864-7292883	None:intergenic	35.0%
	TTTAGAAAAACCACCAGAAG+AGG	-	chr5_3:7292865-7292884	None:intergenic	35.0%
!	TGGTGGTTTTTCTAAACTCA+AGG	+	chr5_3:7292869-7292888	Msa0795340:three_prime_UTR	35.0%
!	AATGACTAAGTTGGCTATCT+TGG	-	chr5_3:7292930-7292949	None:intergenic	35.0%
	ACTCTGCTAAATGACTAAGT+TGG	-	chr5_3:7292939-7292958	None:intergenic	35.0%
	GTCTCTTTATTCTCACCAAT+AGG	-	chr5_3:7293030-7293049	None:intergenic	35.0%
	TGATCGGAAATGGTGAAAAG+GGG	-	chr5_3:7289119-7289138	None:intergenic	40.0%
	GTGATCGGAAATGGTGAAAA+GGG	-	chr5_3:7289120-7289139	None:intergenic	40.0%
	TGTGATCGGAAATGGTGAAA+AGG	-	chr5_3:7289121-7289140	None:intergenic	40.0%
	GAAATTCAGATGGCGTTACA+AGG	+	chr5_3:7289336-7289355	Msa0795340:intron	40.0%
	ATCAAGCATAGCAGCAAACA+AGG	+	chr5_3:7289407-7289426	Msa0795340:CDS	40.0%
!	GTATCGGTCGAAAATTTGAC+CGG	-	chr5_3:7289465-7289484	None:intergenic	40.0%
	AGTATTCGTAAAGCTCCTGT+TGG	+	chr5_3:7289507-7289526	Msa0795340:CDS	40.0%
	ACAGGGCCTATATACAACTT+AGG	-	chr5_3:7289967-7289986	None:intergenic	40.0%
	AGTTGTATATAGGCCCTGTA+TGG	+	chr5_3:7289968-7289987	Msa0795340:intron	40.0%
	CAGCCAATGATATGTCCATA+AGG	-	chr5_3:7290143-7290162	None:intergenic	40.0%
	GTATAGGTACCTCTTGTCAT+AGG	-	chr5_3:7290280-7290299	None:intergenic	40.0%
	GGACTATAAATTTGCACGGA+AGG	-	chr5_3:7290441-7290460	None:intergenic	40.0%
!!	CTTTAGGTTCTAAAGCCCTT+TGG	+	chr5_3:7290501-7290520	Msa0795340:intron	40.0%
	CACCACTCAGAATAACCATT+AGG	-	chr5_3:7290647-7290666	None:intergenic	40.0%
!	ATAAACCTTTTCAGCCAACC+CGG	+	chr5_3:7290678-7290697	Msa0795340:intron	40.0%
!!	TGTTAGCTTTCATGTCCACA+TGG	-	chr5_3:7290823-7290842	None:intergenic	40.0%
	ATAGTCGAAACATGCTCTTC+GGG	+	chr5_3:7291032-7291051	Msa0795340:intron	40.0%
!	CTTCTGGAAATTTGCGTATC+AGG	-	chr5_3:7291077-7291096	None:intergenic	40.0%
	CTGATACGCAAATTTCCAGA+AGG	+	chr5_3:7291075-7291094	Msa0795340:CDS	40.0%
	TCAATAACAGCAATGCCTTC+TGG	-	chr5_3:7291093-7291112	None:intergenic	40.0%
	GGATTCATACCCAACTGTAA+TGG	+	chr5_3:7291119-7291138	Msa0795340:CDS	40.0%
	TTCATACCCAACTGTAATGG+AGG	+	chr5_3:7291122-7291141	Msa0795340:CDS	40.0%
	GTAAGTCCTCCATTACAGTT+GGG	-	chr5_3:7291131-7291150	None:intergenic	40.0%
	TGTAAGTCCTCCATTACAGT+TGG	-	chr5_3:7291132-7291151	None:intergenic	40.0%
!	AACTGTAATGGAGGACTTAC+AGG	+	chr5_3:7291131-7291150	Msa0795340:CDS	40.0%
	GTTGCTCAATAAGATCAAGG+TGG	-	chr5_3:7291254-7291273	None:intergenic	40.0%
	GCACATGAAAGGAATCAAGT+TGG	-	chr5_3:7291290-7291309	None:intergenic	40.0%
	TCTTTCATAGGCATAGTGAC+TGG	-	chr5_3:7291354-7291373	None:intergenic	40.0%
	AGTCTATCAGATACAAAGGG+AGG	-	chr5_3:7291533-7291552	None:intergenic	40.0%
	GCTGGGACAAGATTGTATAT+GGG	-	chr5_3:7291607-7291626	None:intergenic	40.0%
	AGCTGGGACAAGATTGTATA+TGG	-	chr5_3:7291608-7291627	None:intergenic	40.0%
	GTCAGGGACAGACTATATTT+GGG	-	chr5_3:7291638-7291657	None:intergenic	40.0%
	AGTCAGGGACAGACTATATT+TGG	-	chr5_3:7291639-7291658	None:intergenic	40.0%
!	GAGAGTGTAACTACAAAGAG+AGG	-	chr5_3:7291890-7291909	None:intergenic	40.0%
	TGGGTCCCATATGAATTTAG+TGG	+	chr5_3:7291970-7291989	Msa0795340:intron	40.0%
	GGGTCCCATATGAATTTAGT+GGG	+	chr5_3:7291971-7291990	Msa0795340:intron	40.0%
	GTCTTCCTGTGAATCAAAGT+TGG	-	chr5_3:7292299-7292318	None:intergenic	40.0%
!!	CACTTTAGGATCATTAGGGT+AGG	-	chr5_3:7292326-7292345	None:intergenic	40.0%
!!	TGGGCACTTTAGGATCATTA+GGG	-	chr5_3:7292330-7292349	None:intergenic	40.0%
!!	ATGGGCACTTTAGGATCATT+AGG	-	chr5_3:7292331-7292350	None:intergenic	40.0%
!	TGATCCTAAAGTGCCCATTA+AGG	+	chr5_3:7292333-7292352	Msa0795340:CDS	40.0%
	AGGTCATCATCCACCTTAAT+GGG	-	chr5_3:7292349-7292368	None:intergenic	40.0%
	TAGGTCATCATCCACCTTAA+TGG	-	chr5_3:7292350-7292369	None:intergenic	40.0%
!!!	GACCTAAAACAGCTTTTTCG+TGG	+	chr5_3:7292364-7292383	Msa0795340:CDS	40.0%
!!	TCCCACGAAAAAGCTGTTTT+AGG	-	chr5_3:7292369-7292388	None:intergenic	40.0%
	GAGAGGGATCTCCAAAAAAA+TGG	+	chr5_3:7292418-7292437	Msa0795340:CDS	40.0%
!	CTTTTTGCAGTGTTAGTAGC+AGG	-	chr5_3:7292451-7292470	None:intergenic	40.0%
	CTGCTACTAACACTGCAAAA+AGG	+	chr5_3:7292449-7292468	Msa0795340:CDS	40.0%
	CTACTAACACTGCAAAAAGG+AGG	+	chr5_3:7292452-7292471	Msa0795340:CDS	40.0%
	CACGCTGAGTTACTTAAATC+AGG	-	chr5_3:7292602-7292621	None:intergenic	40.0%
	TTAAGTAACTCAGCGTGTGT+TGG	+	chr5_3:7292605-7292624	Msa0795340:three_prime_UTR	40.0%
	TAAGTAACTCAGCGTGTGTT+GGG	+	chr5_3:7292606-7292625	Msa0795340:three_prime_UTR	40.0%
!	TTGTATTAGCTTACTGCCTC+AGG	+	chr5_3:7292715-7292734	Msa0795340:three_prime_UTR	40.0%
	GAAGAATCAACTTTCCAGAG+TGG	+	chr5_3:7292760-7292779	Msa0795340:three_prime_UTR	40.0%
	GGATGACACATTGCAAATTC+AGG	+	chr5_3:7292781-7292800	Msa0795340:three_prime_UTR	40.0%
!	AAATTCAGGGTATTCCTTCC+AGG	+	chr5_3:7292795-7292814	Msa0795340:three_prime_UTR	40.0%
	CTTAAGTAAAAGGGCAAAGG+TGG	+	chr5_3:7292831-7292850	Msa0795340:three_prime_UTR	40.0%
	TAGAAAAACCACCAGAAGAG+GGG	-	chr5_3:7292863-7292882	None:intergenic	40.0%
	AAATCAAGGGCAGAAAATGG+CGG	+	chr5_3:7292903-7292922	Msa0795340:three_prime_UTR	40.0%
	ACATTGTCCCTCTCATTCTT+AGG	+	chr5_3:7292963-7292982	Msa0795340:three_prime_UTR	40.0%
	AGTAGGACCTAAGAATGAGA+GGG	-	chr5_3:7292973-7292992	None:intergenic	40.0%
	AAGTAGGACCTAAGAATGAG+AGG	-	chr5_3:7292974-7292993	None:intergenic	40.0%
	TCATTCTTAGGTCCTACTTC+TGG	+	chr5_3:7292975-7292994	Msa0795340:three_prime_UTR	40.0%
	CTGACGAGGACATACAACTT+AGG	-	chr5_3:7289868-7289887	None:intergenic	45.0%
!!!	AGGCTTTTTTTGGTAGTGGC+CGG	-	chr5_3:7289947-7289966	None:intergenic	45.0%
	GCAATTCCTCCTATGACAAG+AGG	+	chr5_3:7290268-7290287	Msa0795340:intron	45.0%
	TAGGTACCTCTTGTCATAGG+AGG	-	chr5_3:7290277-7290296	None:intergenic	45.0%
	ATACCCATCAACCACAAGAG+AGG	-	chr5_3:7290705-7290724	None:intergenic	45.0%
	ACGAGTCCTACCAATTCTTG+TGG	+	chr5_3:7291950-7291969	Msa0795340:intron	45.0%
	CGAGTCCTACCAATTCTTGT+GGG	+	chr5_3:7291951-7291970	Msa0795340:intron	45.0%
	CATATGGGACCCACAAGAAT+TGG	-	chr5_3:7291963-7291982	None:intergenic	45.0%
	TATACTCAGATGACTCGCTG+TGG	+	chr5_3:7292144-7292163	Msa0795340:intron	45.0%
!!	TATAGGCTTTGAAAGGTGGC+AGG	+	chr5_3:7292257-7292276	Msa0795340:intron	45.0%
!!	ATAGGCTTTGAAAGGTGGCA+GGG	+	chr5_3:7292258-7292277	Msa0795340:intron	45.0%
	GCTGTCCAACTTTGATTCAC+AGG	+	chr5_3:7292291-7292310	Msa0795340:CDS	45.0%
!	TCCTAAAGTGCCCATTAAGG+TGG	+	chr5_3:7292336-7292355	Msa0795340:CDS	45.0%
!	TCCACCTTAATGGGCACTTT+AGG	-	chr5_3:7292340-7292359	None:intergenic	45.0%
	ATTAGTCAGCTTGGTCCTCT+TGG	-	chr5_3:7292542-7292561	None:intergenic	45.0%
	AAGATGGGCATTAGTCAGCT+TGG	-	chr5_3:7292551-7292570	None:intergenic	45.0%
	CTGAAAAAGCTCCGGAAGAT+GGG	-	chr5_3:7292566-7292585	None:intergenic	45.0%
	TCTGAAAAAGCTCCGGAAGA+TGG	-	chr5_3:7292567-7292586	None:intergenic	45.0%
	GAGATTTCCCATTGTCCAGA+AGG	+	chr5_3:7292678-7292697	Msa0795340:three_prime_UTR	45.0%
!	TAGCTTACTGCCTCAGGTTT+TGG	+	chr5_3:7292721-7292740	Msa0795340:three_prime_UTR	45.0%
	TTGCAATGTGTCATCCACTC+TGG	-	chr5_3:7292777-7292796	None:intergenic	45.0%
!!	TTAAACATTATTAATTTATT+GGG	-	chr5_3:7290320-7290339	None:intergenic	5.0%
!!	ATTAAACATTATTAATTTAT+TGG	-	chr5_3:7290321-7290340	None:intergenic	5.0%
!!	ATAAATTAATAATGTTTAAT+TGG	+	chr5_3:7290321-7290340	Msa0795340:intron	5.0%
	TGTGCCAAATGCTCTTGCTC+CGG	+	chr5_3:7289443-7289462	Msa0795340:CDS	50.0%
!!	TTGACCGGAGCAAGAGCATT+TGG	-	chr5_3:7289450-7289469	None:intergenic	50.0%
	CGCTTCATTTGAGCTCCAAC+AGG	-	chr5_3:7289525-7289544	None:intergenic	50.0%
	GTTGTATGTCCTCGTCAGCT+TGG	+	chr5_3:7289870-7289889	Msa0795340:intron	50.0%
	TCAGCTTGGCTCAGTTGGTT+GGG	+	chr5_3:7289884-7289903	Msa0795340:intron	50.0%
!!!	GCTTTTTTTGGTAGTGGCCG+GGG	-	chr5_3:7289945-7289964	None:intergenic	50.0%
!!!	GGCTTTTTTTGGTAGTGGCC+GGG	-	chr5_3:7289946-7289965	None:intergenic	50.0%
!!	GTTAATGGTGGATCCCTGTG+AGG	-	chr5_3:7290381-7290400	None:intergenic	50.0%
	ACAGGGATCCACCATTAACC+CGG	+	chr5_3:7290382-7290401	Msa0795340:intron	50.0%
	ATCAACCACAAGAGAGGTCC+GGG	-	chr5_3:7290699-7290718	None:intergenic	50.0%
	CATCAACCACAAGAGAGGTC+CGG	-	chr5_3:7290700-7290719	None:intergenic	50.0%
	GGACCTCTCTTGTGGTTGAT+GGG	+	chr5_3:7290699-7290718	Msa0795340:intron	50.0%
!	GACTCGGCAGGCTTTAACAT+TGG	+	chr5_3:7290778-7290797	Msa0795340:intron	50.0%
	AGGGAGGAACGTGAATACTC+AGG	-	chr5_3:7291517-7291536	None:intergenic	50.0%
	CTCAGAGAAGCCGAGACTTT+GGG	-	chr5_3:7291838-7291857	None:intergenic	50.0%
	TCTCAGAGAAGCCGAGACTT+TGG	-	chr5_3:7291839-7291858	None:intergenic	50.0%
!!	CTTCTCTGAGACAAGGCACA+AGG	+	chr5_3:7291848-7291867	Msa0795340:intron	50.0%
!	AGAGAGGGTGCATATACACC+TGG	-	chr5_3:7291874-7291893	None:intergenic	50.0%
	TGGGACCCACAAGAATTGGT+AGG	-	chr5_3:7291959-7291978	None:intergenic	50.0%
	TGAAAGGTGGCAGGGAGATT+TGG	+	chr5_3:7292266-7292285	Msa0795340:CDS	50.0%
!	AAGGAGGAGTGCAGCACAAA+TGG	+	chr5_3:7292468-7292487	Msa0795340:CDS	50.0%
!	AGGAGTGCAGCACAAATGGA+AGG	+	chr5_3:7292472-7292491	Msa0795340:CDS	50.0%
	GCTGACTAATGCCCATCTTC+CGG	+	chr5_3:7292552-7292571	Msa0795340:CDS	50.0%
	GTCAGCTTGGCTCAGTTGGT+TGG	+	chr5_3:7289883-7289902	Msa0795340:intron	55.0%
	AAGGTTCGGGGTTCAAACCC+CGG	+	chr5_3:7289925-7289944	Msa0795340:intron	55.0%
	CGGACCTCTCTTGTGGTTGA+TGG	+	chr5_3:7290698-7290717	Msa0795340:intron	55.0%
	GAGAAGCCGAGACTTTGGGT+AGG	-	chr5_3:7291834-7291853	None:intergenic	55.0%
!!	GTCTCGGCTTCTCTGAGACA+AGG	+	chr5_3:7291841-7291860	Msa0795340:intron	55.0%
	AACCACCAGAAGAGGGGTTC+TGG	-	chr5_3:7292857-7292876	None:intergenic	55.0%
	CCAACTGAGCCAAGCTGACG+AGG	-	chr5_3:7289882-7289901	None:intergenic	60.0%
	CCTCGTCAGCTTGGCTCAGT+TGG	+	chr5_3:7289879-7289898	Msa0795340:intron	60.0%
!!	GAGGTCCGGGTTGGCTGAAA+AGG	-	chr5_3:7290686-7290705	None:intergenic	60.0%
	ACCACAAGAGAGGTCCGGGT+TGG	-	chr5_3:7290695-7290714	None:intergenic	60.0%
	CTGAGACAAGGCACAAGGCC+AGG	+	chr5_3:7291853-7291872	Msa0795340:intron	60.0%
	GCCAACCCGGACCTCTCTTG+TGG	+	chr5_3:7290691-7290710	Msa0795340:intron	65.0%
	GGTGGCCAGAACCCCTCTTC+TGG	+	chr5_3:7292849-7292868	Msa0795340:three_prime_UTR	65.0%
	GGCCAGAACCCCTCTTCTGG+TGG	+	chr5_3:7292852-7292871	Msa0795340:three_prime_UTR	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	7288885	7293156	7288885	ID=Msa0795340;Name=Msa0795340
chr5_3	mRNA	7288885	7293156	7288885	ID=Msa0795340-mRNA-1;Parent=Msa0795340;Name=Msa0795340-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0\|1\|0.8\|1\|0.75\|0.8\|5\|553\|299
chr5_3	exon	7288885	7288971	7288885	ID=Msa0795340-mRNA-1:exon:3003;Parent=Msa0795340-mRNA-1
chr5_3	exon	7289345	7289566	7289345	ID=Msa0795340-mRNA-1:exon:3004;Parent=Msa0795340-mRNA-1
chr5_3	exon	7290779	7290910	7290779	ID=Msa0795340-mRNA-1:exon:3005;Parent=Msa0795340-mRNA-1
chr5_3	exon	7291036	7291152	7291036	ID=Msa0795340-mRNA-1:exon:3006;Parent=Msa0795340-mRNA-1
chr5_3	exon	7292262	7293156	7292262	ID=Msa0795340-mRNA-1:exon:3007;Parent=Msa0795340-mRNA-1
chr5_3	CDS	7288885	7288971	7288885	ID=Msa0795340-mRNA-1:cds;Parent=Msa0795340-mRNA-1
chr5_3	CDS	7289345	7289566	7289345	ID=Msa0795340-mRNA-1:cds;Parent=Msa0795340-mRNA-1
chr5_3	CDS	7290779	7290910	7290779	ID=Msa0795340-mRNA-1:cds;Parent=Msa0795340-mRNA-1
chr5_3	CDS	7291036	7291152	7291036	ID=Msa0795340-mRNA-1:cds;Parent=Msa0795340-mRNA-1
chr5_3	CDS	7292262	7292603	7292262	ID=Msa0795340-mRNA-1:cds;Parent=Msa0795340-mRNA-1
chr5_3	three_prime_UTR	7292604	7293156	7292604	ID=Msa0795340-mRNA-1:three_prime_utr;Parent=Msa0795340-mRNA-1

Gene Sequence

>Msa0795340

ATGAATAAGAAGGAAAAAAACACCAAAGACTTTGTTTTTCTGCATTCCTTCTTCCATATCGAAAAATCTGTGACGAACTTAATCACGATGGCGTTACAAGGAAAGCTAGATAGATTCAAAAAGCAGCAAGAGAAATGTCAATCAACACTATCAAGCATAGCAGCAAACAAGGCTGTATCTGCATCTGTGCCAAATGCTCTTGCTCCGGTCAAATTTTCGACCGATACAGAGAGACTTCAACATATTAATAGTATTCGTAAAGCTCCTGTTGGAGCTCAAATGAAGCGCGTTATTGATCTTCTTTTTGAGACTCGGCAGGCTTTAACATTGGAGCAAATAAATGAAACATGCCATGTGGACATGAAAGCTAACAAAGATGTTTTTGACAATATGAGGAAAAATCCAAAAGTAAGATACGATGGAGAAAGATTCTCTTACAAGTCGAAACATGCTCTTCGGGACAAAAAAGAGCTGCTTTTCCTGATACGCAAATTTCCAGAAGGCATTGCTGTTATTGACTTAAAGGATTCATACCCAACTGTAATGGAGGACTTACAGGCTTTGAAAGGTGGCAGGGAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAATGATCCTAAAGTGCCCATTAAGGTGGATGATGACCTAAAACAGCTTTTTCGTGGGATTGAATTGCCTCGTGATATGATTGATATAGAGAGGGATCTCCAAAAAAATGGAATGAAGCCTGCTACTAACACTGCAAAAAGGAGGAGTGCAGCACAAATGGAAGGCATTTCATCCAAGCCTAAACCTAAGAAAAAGAAGAATGAAATCACCAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCAGAACTTGAACAACTCCTGA

Protein sequence

>Msa0795340

MNKKEKNTKDFVFLHSFFHIEKSVTNLITMALQGKLDRFKKQQEKCQSTLSSIAANKAVSASVPNALAPVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKGGREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLNNS*