AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0183450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183450 MtrunA17_Chr1g0211071 96.744 430 14 0 1 430 1 430 0.0 853
Msa0183450 MtrunA17_Chr3g0145681 46.588 425 165 14 12 420 6 384 1.05e-86 269
Msa0183450 MtrunA17_Chr8g0381161 28.708 209 135 4 232 430 208 412 2.55e-14 74.3
Msa0183450 MtrunA17_Chr2g0277291 29.082 196 122 5 248 430 194 385 9.46e-13 69.3
Msa0183450 MtrunA17_Chr8g0381111 27.647 170 108 2 176 332 226 393 4.98e-12 67.8
Msa0183450 MtrunA17_Chr8g0381141 27.647 170 108 2 176 332 167 334 6.50e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183450 AT2G16900.5 30.340 412 217 13 59 430 1 382 6.58e-40 147
Msa0183450 AT2G16900.6 30.340 412 217 13 59 430 1 382 6.58e-40 147
Msa0183450 AT2G16900.1 30.340 412 217 13 59 430 1 382 6.58e-40 147
Msa0183450 AT4G35110.1 39.896 193 106 2 238 430 204 386 9.82e-39 144
Msa0183450 AT4G35110.2 39.896 193 106 2 238 430 204 386 9.82e-39 144
Msa0183450 AT4G35110.6 39.896 193 106 2 238 430 204 386 9.82e-39 144
Msa0183450 AT4G35110.5 39.896 193 106 2 238 430 204 386 9.82e-39 144
Msa0183450 AT4G35110.3 39.896 193 106 2 238 430 219 401 1.17e-38 144
Msa0183450 AT4G35110.4 39.896 193 106 2 238 430 216 398 1.46e-38 144
Msa0183450 AT2G16900.3 37.864 206 114 3 229 430 98 293 1.50e-35 133
Msa0183450 AT2G16900.4 37.864 206 114 3 229 430 98 293 1.50e-35 133
Msa0183450 AT2G16900.2 37.864 206 114 3 229 430 98 293 1.50e-35 133
Msa0183450 AT2G16900.7 37.864 206 114 3 229 430 98 293 1.50e-35 133
Msa0183450 AT4G38550.5 34.896 192 125 0 235 426 317 508 2.80e-34 134
Msa0183450 AT4G38550.4 34.896 192 125 0 235 426 359 550 3.75e-34 134
Msa0183450 AT4G38550.2 35.149 202 130 1 228 429 449 649 4.65e-34 135
Msa0183450 AT4G38550.3 35.176 199 128 1 228 426 412 609 4.75e-34 134
Msa0183450 AT4G38550.1 35.176 199 128 1 228 426 412 609 4.75e-34 134
Msa0183450 AT5G11140.1 36.216 185 118 0 246 430 57 241 9.78e-34 127
Msa0183450 AT4G38560.1 36.181 199 125 1 234 430 323 521 8.34e-32 127
Msa0183450 AT4G38560.2 36.181 199 125 1 234 430 325 523 9.36e-32 127
Msa0183450 AT2G20960.3 34.197 193 127 0 238 430 486 678 1.50e-31 127
Msa0183450 AT2G20960.2 34.197 193 127 0 238 430 521 713 1.90e-31 127
Msa0183450 AT2G20960.1 34.197 193 127 0 238 430 556 748 2.32e-31 127
Msa0183450 AT2G20960.4 34.197 193 127 0 238 430 556 748 2.32e-31 127
Msa0183450 AT2G20950.5 35.829 187 120 0 240 426 196 382 6.25e-28 114
Msa0183450 AT2G20950.9 35.829 187 120 0 240 426 196 382 6.25e-28 114
Msa0183450 AT2G20950.2 35.829 187 120 0 240 426 315 501 1.71e-27 114
Msa0183450 AT2G20950.3 35.829 187 120 0 240 426 317 503 1.82e-27 114
Msa0183450 AT2G20950.1 35.829 187 120 0 240 426 332 518 1.86e-27 114
Msa0183450 AT2G20950.4 35.829 187 120 0 240 426 334 520 1.86e-27 114
Msa0183450 AT2G20950.11 35.829 187 120 0 240 426 225 411 2.01e-27 113
Msa0183450 AT2G20950.8 35.829 187 120 0 240 426 359 545 2.21e-27 114
Msa0183450 AT2G20950.6 35.829 187 120 0 240 426 286 472 2.30e-27 114
Msa0183450 AT2G20950.14 35.829 187 120 0 240 426 288 474 2.70e-27 114
Msa0183450 AT2G20950.7 35.829 187 120 0 240 426 359 545 3.32e-27 114
Msa0183450 AT2G20950.13 35.829 187 120 0 240 426 315 501 4.22e-27 113
Msa0183450 AT2G20950.10 35.829 187 120 0 240 426 315 501 4.22e-27 113
Msa0183450 AT2G20950.12 35.829 187 120 0 240 426 281 467 4.26e-27 113

Find 127 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATCCAAGGTTGATAATT+TGG 0.133061 1_4:+72394679 Msa0183450:CDS
GCCTGGTTCCAAGACGTTTA+AGG 0.212905 1_4:-72394876 None:intergenic
TCTTGGAACCAGGCCAATTT+TGG 0.212961 1_4:+72394885 Msa0183450:three_prime_UTR
GAGATAAATGGCGCCAATTT+TGG 0.225914 1_4:-72393535 None:intergenic
AGTTTATATTATGACATTTC+AGG 0.266845 1_4:+72395101 Msa0183450:three_prime_UTR
CTGCTTGATTTGTCTGTATC+TGG 0.275302 1_4:-72393980 None:intergenic
AGAATGTCTGGAGCTGATTC+AGG 0.287049 1_4:+72392789 Msa0183450:CDS
TCGCAAAGCTGCTCCAAAAT+TGG 0.297229 1_4:-72394898 None:intergenic
AAACCTGTTACTGTTTCATT+TGG 0.304219 1_4:+72391298 Msa0183450:five_prime_UTR
GACATACTGTTTAATCTCTT+GGG 0.310133 1_4:+72395034 Msa0183450:three_prime_UTR
CAATCTATCTTTGACAAGTA+TGG 0.311439 1_4:+72394224 Msa0183450:CDS
TTATTTATTTACTTTATGTT+TGG 0.311447 1_4:+72395127 Msa0183450:three_prime_UTR
TGAGATGAAGTCATCTGATT+TGG 0.311588 1_4:+72394637 Msa0183450:CDS
GACCATATGGCTTTGTTTGA+TGG 0.324094 1_4:-72391163 None:intergenic
TTTCCAAATGAAACAGTAAC+AGG 0.332312 1_4:-72391301 None:intergenic
ATGGCTTTGTTTGATGGTTA+TGG 0.347436 1_4:-72391157 None:intergenic
AGACATACTGTTTAATCTCT+TGG 0.350486 1_4:+72395033 Msa0183450:three_prime_UTR
GTTGCAATCAACCTCAATAA+TGG 0.352010 1_4:+72394328 Msa0183450:CDS
AGTGTTCCGGCCTCCAAAAT+TGG 0.356548 1_4:+72393522 Msa0183450:CDS
ATTAATAATGTAAACTGCTT+AGG 0.358005 1_4:+72394733 Msa0183450:exon
CCCAGTTCTTGATAGTGTTC+CGG 0.360623 1_4:+72393509 Msa0183450:CDS
ATGTCATCAAAACAGGTTAC+TGG 0.372121 1_4:-72394032 None:intergenic
TTTGGATAGCAGATCATTGC+TGG 0.373557 1_4:+72394697 Msa0183450:CDS
AGCCAACAATTCCTTAACTT+TGG 0.375480 1_4:-72394363 None:intergenic
ATGGTAAGGATTAGATGCTT+TGG 0.384466 1_4:-72392742 None:intergenic
TGCTTCAATTAATTTCCATA+TGG 0.386029 1_4:+72391061 None:intergenic
CTGTTTCATTTGGAAATTTG+TGG 0.403170 1_4:+72391308 Msa0183450:five_prime_UTR
TTTGACAAGTATGGTGATAT+AGG 0.403553 1_4:+72394233 Msa0183450:CDS
TTGAGGTTGATTGCAACTCT+TGG 0.403873 1_4:-72394322 None:intergenic
TGTTGAGATAGATGTGTGTT+TGG 0.406531 1_4:-72391276 None:intergenic
TTCTCCAATGTCATCAAAAC+AGG 0.411746 1_4:-72394039 None:intergenic
TGGTAAGGATTAGATGCTTT+GGG 0.412334 1_4:-72392741 None:intergenic
GGTTTCCGAGACGCGTGTTC+CGG 0.412451 1_4:+72394160 Msa0183450:CDS
GTCCAAAGTTAAGGAATTGT+TGG 0.414758 1_4:+72394361 Msa0183450:CDS
ACACAGTTTGGCATAACTCT+TGG 0.416359 1_4:-72391995 None:intergenic
GGTTGGACTTTGTCATTGAC+AGG 0.416998 1_4:-72393930 None:intergenic
CCTTCGCTGCCTCCACGGAC+TGG 0.417167 1_4:-72394481 None:intergenic
CATCTGATTTGGAGAAGAAC+AGG 0.418056 1_4:+72394648 Msa0183450:CDS
CTTTGTTAATTCCATTATTG+AGG 0.418558 1_4:-72394339 None:intergenic
TACTTTATGTTTGGATGCTG+AGG 0.418763 1_4:+72395136 Msa0183450:three_prime_UTR
CTATCAAGAACTGGGAGTTC+AGG 0.419986 1_4:-72393501 None:intergenic
GCCGGAACACTATCAAGAAC+TGG 0.422891 1_4:-72393510 None:intergenic
ATTAACAAAGTCCAAAGTTA+AGG 0.424679 1_4:+72394352 Msa0183450:CDS
AGATTCTCAGAACCATCCTT+TGG 0.426249 1_4:-72393951 None:intergenic
ATAATACACCTTAAACGTCT+TGG 0.433733 1_4:+72394868 Msa0183450:three_prime_UTR
TTAGAAGCATATACACAGTT+TGG 0.434446 1_4:-72392007 None:intergenic
GATGGTTCTGAGAATCTTGC+CGG 0.438726 1_4:+72393957 Msa0183450:CDS
AATTGATTTCCTTGATCTTG+TGG 0.441816 1_4:-72392060 None:intergenic
CTTGTATGCGGAAAATAACT+TGG 0.442279 1_4:-72395012 None:intergenic
TGCCGCATCAGCGAGATAAA+TGG 0.445859 1_4:-72393547 None:intergenic
AATTGCCAGAAAAGAATGTC+TGG 0.451422 1_4:+72392777 Msa0183450:CDS
GGCTGACTCTGATAGTGAAA+TGG 0.452176 1_4:+72394502 Msa0183450:CDS
TCATTCCATTATCCTTTGAC+AGG 0.453813 1_4:+72393457 Msa0183450:CDS
TCAATTAATTTCCATATGGA+TGG 0.455991 1_4:+72391065 Msa0183450:five_prime_UTR
ATTATAGTCATCCATCCATA+TGG 0.457030 1_4:-72391076 None:intergenic
TTCACATGGTATCTTCCAAC+CGG 0.459840 1_4:-72394179 None:intergenic
TATAGGAGAAAGCTGCCATT+TGG 0.459842 1_4:+72394250 Msa0183450:CDS
ACTTGTCAAAGATAGATTGC+AGG 0.471370 1_4:-72394220 None:intergenic
GCTATCCAAATTATCAACCT+TGG 0.473319 1_4:-72394684 None:intergenic
CATCACTGTCCTCATTATCA+TGG 0.477505 1_4:-72394115 None:intergenic
AGAAAGCTGCCATTTGGAAT+CGG 0.478703 1_4:+72394256 Msa0183450:CDS
GAGGACAGTGATGATGAAGA+GGG 0.480600 1_4:+72394125 Msa0183450:CDS
AATGTAAACTGCTTAGGTAA+TGG 0.481977 1_4:+72394739 Msa0183450:three_prime_UTR
ATCAGAATAACAAAAGTGCT+TGG 0.488484 1_4:-72394087 None:intergenic
AACCATCAAACAAAGCCATA+TGG 0.489608 1_4:+72391161 Msa0183450:five_prime_UTR
TCTCAGAACCATCCTTTGGT+TGG 0.489848 1_4:-72393947 None:intergenic
GTCAGCCTTCGCTGCCTCCA+CGG 0.492054 1_4:-72394486 None:intergenic
CTTTGCTACAAACCAGCCTA+AGG 0.496836 1_4:-72391931 None:intergenic
ACCTTAAACGTCTTGGAACC+AGG 0.497652 1_4:+72394875 Msa0183450:three_prime_UTR
CCAGTCCGTGGAGGCAGCGA+AGG 0.500128 1_4:+72394481 Msa0183450:CDS
AATGAGATAGTACCAGCTTC+TGG 0.501090 1_4:+72393618 Msa0183450:CDS
TCGTCTTTGACTTCCTTCCT+AGG 0.513305 1_4:+72391355 Msa0183450:five_prime_UTR
TGTAACAGTTACCCTTAGGC+TGG 0.515979 1_4:+72391919 Msa0183450:intron
AAGCTGCTCCAAAATTGGCC+TGG 0.517308 1_4:-72394893 None:intergenic
TGGATGTAACAGTTACCCTT+AGG 0.517766 1_4:+72391915 Msa0183450:intron
CTTAGGCTGGTTTGTAGCAA+AGG 0.517895 1_4:+72391932 Msa0183450:five_prime_UTR
GGTGTTATAGAAAGTGAGAT+AGG 0.519458 1_4:+72392678 Msa0183450:CDS
CTGCTCAACTTCGCGTGACG+TGG 0.519956 1_4:+72394405 Msa0183450:CDS
TGAATGAATGAGAATTAAGA+AGG 0.520621 1_4:-72391200 None:intergenic
TTGTACTGCAATTGATGCAT+TGG 0.522973 1_4:-72394968 None:intergenic
TCCAACCGGAACACGCGTCT+CGG 0.523274 1_4:-72394165 None:intergenic
TTTACATCACACGCATGGTA+AGG 0.525868 1_4:-72392756 None:intergenic
GCATCACAACCGATTCCAAA+TGG 0.527475 1_4:-72394265 None:intergenic
CAACTGAATCAATAAAGTCA+TGG 0.529124 1_4:+72394804 Msa0183450:three_prime_UTR
ATATGGAAATTAATTGAAGC+AGG 0.533008 1_4:-72391059 None:intergenic
GAAGGTCTAACTACATCAGC+TGG 0.534751 1_4:+72394059 Msa0183450:CDS
TTTATGTTTGGATGCTGAGG+GGG 0.535399 1_4:+72395139 Msa0183450:three_prime_UTR
TCAAAGATAGATTGCAGGAT+GGG 0.535446 1_4:-72394215 None:intergenic
TGAGGACAGTGATGATGAAG+AGG 0.538033 1_4:+72394124 Msa0183450:CDS
ACATACTGTTTAATCTCTTG+GGG 0.538286 1_4:+72395035 Msa0183450:three_prime_UTR
CATGTATGATGTACCTAGGA+AGG 0.540441 1_4:-72391368 None:intergenic
AACTGAATCAATAAAGTCAT+GGG 0.545840 1_4:+72394805 Msa0183450:three_prime_UTR
ACTTTATGTTTGGATGCTGA+GGG 0.547355 1_4:+72395137 Msa0183450:three_prime_UTR
AAATTGCATCCACAAGATCA+AGG 0.554464 1_4:+72392051 Msa0183450:CDS
TCCGAGACGCGTGTTCCGGT+TGG 0.556986 1_4:+72394164 Msa0183450:CDS
TTGATTTGTCTGTATCTGGC+CGG 0.560826 1_4:-72393976 None:intergenic
CGCCATTTATCTCGCTGATG+CGG 0.565804 1_4:+72393545 Msa0183450:CDS
GTATGTAGTTCACCAGAAGC+TGG 0.576929 1_4:-72393630 None:intergenic
GTTTGTAGCAAAGGTGAGGA+AGG 0.581195 1_4:+72391941 Msa0183450:five_prime_UTR
AGGTGAGACTTGCATAGAGA+TGG 0.581960 1_4:+72391961 Msa0183450:exon
CAGGCTATCTATCAAATCCA+AGG 0.590819 1_4:+72394667 Msa0183450:CDS
GACAAAGTCCAACCAAAGGA+TGG 0.593512 1_4:+72393939 Msa0183450:CDS
TGATGTGCTCCATGATAATG+AGG 0.599216 1_4:+72394106 Msa0183450:CDS
CCGGAACACTATCAAGAACT+GGG 0.602030 1_4:-72393509 None:intergenic
CTTTATGTTTGGATGCTGAG+GGG 0.602280 1_4:+72395138 Msa0183450:three_prime_UTR
CAGATACAGACAAATCAAGC+AGG 0.602638 1_4:+72393981 Msa0183450:CDS
GTCAAAGATAGATTGCAGGA+TGG 0.607166 1_4:-72394216 None:intergenic
AGTCAAAGACGATGGTGATG+AGG 0.608775 1_4:-72391344 None:intergenic
GGCAATTTACATCACACGCA+TGG 0.610083 1_4:-72392761 None:intergenic
GAGCAAAGCTTTCCTTCACA+TGG 0.615016 1_4:-72394193 None:intergenic
CATTGATGAGCACCAGTCCG+TGG 0.628033 1_4:+72394469 Msa0183450:CDS
CATACTGTTTAATCTCTTGG+GGG 0.629501 1_4:+72395036 Msa0183450:three_prime_UTR
ACTACATACTCTAGATGTCA+AGG 0.630737 1_4:+72393644 Msa0183450:CDS
GCTGGTTTGTAGCAAAGGTG+AGG 0.635111 1_4:+72391937 Msa0183450:five_prime_UTR
ATGGTGATGAGGAAGTTAGT+AGG 0.636592 1_4:-72391333 None:intergenic
AGTACAATAGAGACTAGAGT+TGG 0.641551 1_4:+72394984 Msa0183450:three_prime_UTR
ATTTGGAATCGGTTGTGATG+CGG 0.643613 1_4:+72394267 Msa0183450:CDS
TTTGCTACAAACCAGCCTAA+GGG 0.648555 1_4:-72391930 None:intergenic
GGTCTAACTACATCAGCTGG+TGG 0.651697 1_4:+72394062 Msa0183450:CDS
TTTGACTCAGAAAGAACGGG+AGG 0.654627 1_4:+72394562 Msa0183450:CDS
CAATGACAAAGTCCAACCAA+AGG 0.663967 1_4:+72393935 Msa0183450:CDS
TAAACAGTATGTCTTGTATG+CGG 0.667935 1_4:-72395024 None:intergenic
TGAAGAGGGAAGTGAGTCTG+TGG 0.676872 1_4:+72394139 Msa0183450:CDS
GGTTGGAAGATACCATGTGA+AGG 0.677016 1_4:+72394181 Msa0183450:CDS
TGATGAGCACCAGTCCGTGG+AGG 0.694249 1_4:+72394472 Msa0183450:CDS
AGGAAGGAAGTCAAAGACGA+TGG 0.694831 1_4:-72391352 None:intergenic
ATAGTGAAATGGAATCACTG+AGG 0.783003 1_4:+72394513 Msa0183450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTATTTTTTATCCAAA+CGG + chr1_4:72392281-72392300 Msa0183450:intron 10.0%
!! ATATTAAAACAAAAATTGAA+GGG + chr1_4:72394591-72394610 Msa0183450:CDS 10.0%
!! TTATTTATTTACTTTATGTT+TGG + chr1_4:72395127-72395146 Msa0183450:three_prime_UTR 10.0%
!! TCTAAAAAAATATGTTCAAT+TGG + chr1_4:72391113-72391132 Msa0183450:five_prime_UTR 15.0%
!!! ATAATTTTTTTATGAGTTGA+TGG + chr1_4:72391620-72391639 Msa0183450:intron 15.0%
!!! GTTTAATTTGTTTATTTGAT+TGG + chr1_4:72391895-72391914 Msa0183450:intron 15.0%
!!! TTATTATTTTTTATCCAAAC+GGG + chr1_4:72392282-72392301 Msa0183450:intron 15.0%
!!! TATAGAAGTGAATTTTTTTT+AGG - chr1_4:72392437-72392456 None:intergenic 15.0%
!!! AATTTGATTTAAACATGTTT+GGG - chr1_4:72393272-72393291 None:intergenic 15.0%
!!! TTTAATTTCAAATAAAGTTG+AGG - chr1_4:72393300-72393319 None:intergenic 15.0%
!!! TTGTCATAATATTTTGATAT+TGG - chr1_4:72393576-72393595 None:intergenic 15.0%
!! AATGATATATTTAACATAGA+TGG + chr1_4:72393815-72393834 Msa0183450:intron 15.0%
!! GATATTAAAACAAAAATTGA+AGG + chr1_4:72394590-72394609 Msa0183450:CDS 15.0%
!! GAAAAATGAAAGATAGAAAA+AGG - chr1_4:72391403-72391422 None:intergenic 20.0%
!!! CAAACATTAATTTTATGACA+TGG + chr1_4:72391518-72391537 Msa0183450:intron 20.0%
!!! TATTTTGTCTTTTTCAGATT+TGG + chr1_4:72391804-72391823 Msa0183450:intron 20.0%
!!! ATTTTGTCTTTTTCAGATTT+GGG + chr1_4:72391805-72391824 Msa0183450:intron 20.0%
!!! ATACTCTTTTTTATATACGA+TGG + chr1_4:72392138-72392157 Msa0183450:intron 20.0%
!! TTGAGTTTATCTATTGATAT+AGG + chr1_4:72392180-72392199 Msa0183450:intron 20.0%
!!! TTTTTTTTAGGCATAAAAAC+AGG - chr1_4:72392425-72392444 None:intergenic 20.0%
!! AATTGCAGATAAAAAATGAA+GGG - chr1_4:72392818-72392837 None:intergenic 20.0%
!! AAATTGCAGATAAAAAATGA+AGG - chr1_4:72392819-72392838 None:intergenic 20.0%
!!! CATTTTTTATCTGCAATTTA+TGG + chr1_4:72392820-72392839 Msa0183450:intron 20.0%
!! AGTTAACATGACATATAAAT+TGG - chr1_4:72392916-72392935 None:intergenic 20.0%
!! TAAACAAAATCATAATGTCA+CGG - chr1_4:72393079-72393098 None:intergenic 20.0%
!! TTTGTCAACTTACAAATATT+TGG + chr1_4:72393177-72393196 Msa0183450:intron 20.0%
!!! GAATTTGATTTAAACATGTT+TGG - chr1_4:72393273-72393292 None:intergenic 20.0%
!! TTATAAGTTTACAGTGATTA+AGG - chr1_4:72393342-72393361 None:intergenic 20.0%
!! TAATCACTGTAAACTTATAA+AGG + chr1_4:72393342-72393361 Msa0183450:intron 20.0%
!! ATATTATGACAAGAAAAAGT+TGG + chr1_4:72393584-72393603 Msa0183450:CDS 20.0%
!! ATTAATAATGTAAACTGCTT+AGG + chr1_4:72394733-72394752 Msa0183450:exon 20.0%
!!! CTATGCTATATTTTAAAGAT+AGG + chr1_4:72394830-72394849 Msa0183450:three_prime_UTR 20.0%
!!! ACCAAAAAGTACTAAATTTA+GGG - chr1_4:72395072-72395091 None:intergenic 20.0%
!!! AACCAAAAAGTACTAAATTT+AGG - chr1_4:72395073-72395092 None:intergenic 20.0%
!! AGTTTATATTATGACATTTC+AGG + chr1_4:72395101-72395120 Msa0183450:three_prime_UTR 20.0%
! TCAATTAATTTCCATATGGA+TGG + chr1_4:72391065-72391084 Msa0183450:five_prime_UTR 25.0%
! TGAATGAATGAGAATTAAGA+AGG - chr1_4:72391203-72391222 None:intergenic 25.0%
! CTATACATACACAAGAAAAA+GGG - chr1_4:72391848-72391867 None:intergenic 25.0%
! ACTATACATACACAAGAAAA+AGG - chr1_4:72391849-72391868 None:intergenic 25.0%
! AAGCCACCTAAAAATAAAAA+GGG + chr1_4:72392085-72392104 Msa0183450:CDS 25.0%
!! AAAAAGAGTATATAGCAAAC+AGG - chr1_4:72392129-72392148 None:intergenic 25.0%
! TGATAAACGCTTATACTATA+AGG + chr1_4:72392253-72392272 Msa0183450:intron 25.0%
! GATAAACGCTTATACTATAA+GGG + chr1_4:72392254-72392273 Msa0183450:intron 25.0%
! ACTAAAATATATTACCCGTT+TGG - chr1_4:72392299-72392318 None:intergenic 25.0%
! TTCAGTTACAAATGAGTATT+TGG + chr1_4:72392389-72392408 Msa0183450:intron 25.0%
! TATAGTTGTATCAATTGCAA+CGG + chr1_4:72392453-72392472 Msa0183450:intron 25.0%
!!! TTGACTTGTGATATATCTAT+AGG + chr1_4:72392539-72392558 Msa0183450:intron 25.0%
! AGAGCTTATAATTTATCCTT+TGG + chr1_4:72392572-72392591 Msa0183450:intron 25.0%
!!! AGGTTTTTTTTGTTGAAGTT+AGG + chr1_4:72393362-72393381 Msa0183450:intron 25.0%
! ATCAAATATTCATCTCAAAG+AGG + chr1_4:72393386-72393405 Msa0183450:intron 25.0%
! CTACAATCTTCTTAAATTGT+AGG + chr1_4:72393432-72393451 Msa0183450:intron 25.0%
!! TCTAATAGAAATTTCTGAAG+AGG - chr1_4:72393696-72393715 None:intergenic 25.0%
! TTAACAATATGCTATTGAGA+AGG - chr1_4:72393881-72393900 None:intergenic 25.0%
! CTTTGTTAATTCCATTATTG+AGG - chr1_4:72394342-72394361 None:intergenic 25.0%
! ATTAACAAAGTCCAAAGTTA+AGG + chr1_4:72394352-72394371 Msa0183450:CDS 25.0%
! GAAAGAACTAGAATCAAAAA+TGG + chr1_4:72394535-72394554 Msa0183450:CDS 25.0%
!!! AAATTTTGACTCAGAAAGAA+CGG + chr1_4:72394558-72394577 Msa0183450:CDS 25.0%
! AACTGAATCAATAAAGTCAT+GGG + chr1_4:72394805-72394824 Msa0183450:three_prime_UTR 25.0%
!!! TAATAGTTAATGCTTTTTGC+TGG - chr1_4:72394936-72394955 None:intergenic 25.0%
!!! GCAAAAAGCATTAACTATTA+AGG + chr1_4:72394936-72394955 Msa0183450:three_prime_UTR 25.0%
!!! CCAAAAAGTACTAAATTTAG+GGG - chr1_4:72395071-72395090 None:intergenic 25.0%
ATTATAGTCATCCATCCATA+TGG - chr1_4:72391079-72391098 None:intergenic 30.0%
AAACCTGTTACTGTTTCATT+TGG + chr1_4:72391298-72391317 Msa0183450:five_prime_UTR 30.0%
TTTCCAAATGAAACAGTAAC+AGG - chr1_4:72391304-72391323 None:intergenic 30.0%
CTGTTTCATTTGGAAATTTG+TGG + chr1_4:72391308-72391327 Msa0183450:five_prime_UTR 30.0%
TGTTTCTTCTTTCTGTTTCA+TGG + chr1_4:72391435-72391454 Msa0183450:intron 30.0%
GTTTCTTCTTTCTGTTTCAT+GGG + chr1_4:72391436-72391455 Msa0183450:intron 30.0%
!!! TTTTTTGTATCACCTTTTGC+TGG + chr1_4:72391767-72391786 Msa0183450:intron 30.0%
! TTTTTGTATCACCTTTTGCT+GGG + chr1_4:72391768-72391787 Msa0183450:intron 30.0%
! TTAGAAGCATATACACAGTT+TGG - chr1_4:72392010-72392029 None:intergenic 30.0%
! AATTGATTTCCTTGATCTTG+TGG - chr1_4:72392063-72392082 None:intergenic 30.0%
!!! CTTTTTATTTTTAGGTGGCT+TGG - chr1_4:72392086-72392105 None:intergenic 30.0%
CAAGCCACCTAAAAATAAAA+AGG + chr1_4:72392084-72392103 Msa0183450:CDS 30.0%
!!! GATCCCTTTTTATTTTTAGG+TGG - chr1_4:72392091-72392110 None:intergenic 30.0%
!!! CCAGATCCCTTTTTATTTTT+AGG - chr1_4:72392094-72392113 None:intergenic 30.0%
CCTAAAAATAAAAAGGGATC+TGG + chr1_4:72392091-72392110 Msa0183450:CDS 30.0%
TCAAATAAGCCAATTCAAAG+AGG - chr1_4:72392164-72392183 None:intergenic 30.0%
AGGCAATTATTTCATCAGTT+AGG - chr1_4:72392598-72392617 None:intergenic 30.0%
!! CGAAAAGCTTTGGAAAAAAA+AGG - chr1_4:72392654-72392673 None:intergenic 30.0%
!! AACTTTGTCTTCTAAGATGA+AGG + chr1_4:72392932-72392951 Msa0183450:intron 30.0%
!! ACTTTGTCTTCTAAGATGAA+GGG + chr1_4:72392933-72392952 Msa0183450:intron 30.0%
AGTCTAGAAACAGATTGATT+TGG + chr1_4:72392979-72392998 Msa0183450:intron 30.0%
AAAAGGAAAGTCAGTTGATT+TGG + chr1_4:72393215-72393234 Msa0183450:intron 30.0%
TTTCAAATAAAGTTGAGGTG+TGG - chr1_4:72393295-72393314 None:intergenic 30.0%
ATTAAGGAGAAGTTAGATCA+GGG - chr1_4:72393326-72393345 None:intergenic 30.0%
! TTTTTCCTGTCAAAGGATAA+TGG - chr1_4:72393465-72393484 None:intergenic 30.0%
TGTTCTATAACAGTGTTAGT+TGG + chr1_4:72393744-72393763 Msa0183450:intron 30.0%
GTTCTATAACAGTGTTAGTT+GGG + chr1_4:72393745-72393764 Msa0183450:intron 30.0%
ATGTGAAAACGAAGATAACA+AGG - chr1_4:72393778-72393797 None:intergenic 30.0%
! TTGTTATCTTCGTTTTCACA+TGG + chr1_4:72393777-72393796 Msa0183450:intron 30.0%
!! ATCAGAATAACAAAAGTGCT+TGG - chr1_4:72394090-72394109 None:intergenic 30.0%
CAATCTATCTTTGACAAGTA+TGG + chr1_4:72394224-72394243 Msa0183450:CDS 30.0%
TTTGACAAGTATGGTGATAT+AGG + chr1_4:72394233-72394252 Msa0183450:CDS 30.0%
!!! AATTTTGACTCAGAAAGAAC+GGG + chr1_4:72394559-72394578 Msa0183450:CDS 30.0%
!! CAAATCCAAGGTTGATAATT+TGG + chr1_4:72394679-72394698 Msa0183450:CDS 30.0%
AATGTAAACTGCTTAGGTAA+TGG + chr1_4:72394739-72394758 Msa0183450:three_prime_UTR 30.0%
CAACTGAATCAATAAAGTCA+TGG + chr1_4:72394804-72394823 Msa0183450:three_prime_UTR 30.0%
ATAATACACCTTAAACGTCT+TGG + chr1_4:72394868-72394887 Msa0183450:three_prime_UTR 30.0%
TAAACAGTATGTCTTGTATG+CGG - chr1_4:72395027-72395046 None:intergenic 30.0%
AGACATACTGTTTAATCTCT+TGG + chr1_4:72395033-72395052 Msa0183450:three_prime_UTR 30.0%
GACATACTGTTTAATCTCTT+GGG + chr1_4:72395034-72395053 Msa0183450:three_prime_UTR 30.0%
ACATACTGTTTAATCTCTTG+GGG + chr1_4:72395035-72395054 Msa0183450:three_prime_UTR 30.0%
! CCCCTAAATTTAGTACTTTT+TGG + chr1_4:72395068-72395087 Msa0183450:three_prime_UTR 30.0%
!! ATGGCTTTGTTTGATGGTTA+TGG - chr1_4:72391160-72391179 None:intergenic 35.0%
AACCATCAAACAAAGCCATA+TGG + chr1_4:72391161-72391180 Msa0183450:five_prime_UTR 35.0%
!!! AGCGTTTGTTTTTGACCATA+TGG - chr1_4:72391179-72391198 None:intergenic 35.0%
TGTTGAGATAGATGTGTGTT+TGG - chr1_4:72391279-72391298 None:intergenic 35.0%
AAAGCATGTATGATGTACCT+AGG - chr1_4:72391375-72391394 None:intergenic 35.0%
! CTTTTTGTAAACCCAGCAAA+AGG - chr1_4:72391782-72391801 None:intergenic 35.0%
!!! TTGTCTTTTTCAGATTTGGG+TGG + chr1_4:72391808-72391827 Msa0183450:intron 35.0%
!! TTTTGAGTGCATTCATGGTA+GGG - chr1_4:72392034-72392053 None:intergenic 35.0%
!! ATTTTGAGTGCATTCATGGT+AGG - chr1_4:72392035-72392054 None:intergenic 35.0%
!! TGCAATTTTGAGTGCATTCA+TGG - chr1_4:72392039-72392058 None:intergenic 35.0%
AAATTGCATCCACAAGATCA+AGG + chr1_4:72392051-72392070 Msa0183450:CDS 35.0%
GAAAAGAGACACAAACAGAA+CGG - chr1_4:72392496-72392515 None:intergenic 35.0%
! AGTCAAAACAGAAGCATACA+TGG - chr1_4:72392525-72392544 None:intergenic 35.0%
TATTTCATCAGTTAGGCCAA+AGG - chr1_4:72392591-72392610 None:intergenic 35.0%
GTGTTGAGTGATTTATAGCT+AGG - chr1_4:72392618-72392637 None:intergenic 35.0%
! TTTTCCAAAGCTTTTCGCAA+AGG + chr1_4:72392657-72392676 Msa0183450:intron 35.0%
! GGTGTTATAGAAAGTGAGAT+AGG + chr1_4:72392678-72392697 Msa0183450:CDS 35.0%
TGGTAAGGATTAGATGCTTT+GGG - chr1_4:72392744-72392763 None:intergenic 35.0%
ATGGTAAGGATTAGATGCTT+TGG - chr1_4:72392745-72392764 None:intergenic 35.0%
AATTGCCAGAAAAGAATGTC+TGG + chr1_4:72392777-72392796 Msa0183450:CDS 35.0%
!! CTTTGTCTTCTAAGATGAAG+GGG + chr1_4:72392934-72392953 Msa0183450:intron 35.0%
!! TTTGTCTTCTAAGATGAAGG+GGG + chr1_4:72392935-72392954 Msa0183450:intron 35.0%
TGGAGACTGAAAATAAACTG+TGG + chr1_4:72392999-72393018 Msa0183450:intron 35.0%
AAGTTGACAAACTCATTCAC+TGG - chr1_4:72393168-72393187 None:intergenic 35.0%
!! CTTTCCTTTTCTAAGAGCTA+TGG - chr1_4:72393205-72393224 None:intergenic 35.0%
GATTAAGGAGAAGTTAGATC+AGG - chr1_4:72393327-72393346 None:intergenic 35.0%
TCATTCCATTATCCTTTGAC+AGG + chr1_4:72393457-72393476 Msa0183450:CDS 35.0%
! TAGCTTCTTTTTCCTGTCAA+AGG - chr1_4:72393472-72393491 None:intergenic 35.0%
TTTGACAGGAAAAAGAAGCT+AGG + chr1_4:72393471-72393490 Msa0183450:CDS 35.0%
!! GGTACTATCTCATTGCTTTT+CGG - chr1_4:72393612-72393631 None:intergenic 35.0%
ACTACATACTCTAGATGTCA+AGG + chr1_4:72393644-72393663 Msa0183450:CDS 35.0%
ATGTCATCAAAACAGGTTAC+TGG - chr1_4:72394035-72394054 None:intergenic 35.0%
!!! GTAACCTGTTTTGATGACAT+TGG + chr1_4:72394035-72394054 Msa0183450:CDS 35.0%
TTCTCCAATGTCATCAAAAC+AGG - chr1_4:72394042-72394061 None:intergenic 35.0%
!!! TGTTTTGATGACATTGGAGA+AGG + chr1_4:72394041-72394060 Msa0183450:CDS 35.0%
TCAAAGATAGATTGCAGGAT+GGG - chr1_4:72394218-72394237 None:intergenic 35.0%
ACTTGTCAAAGATAGATTGC+AGG - chr1_4:72394223-72394242 None:intergenic 35.0%
GTTGCAATCAACCTCAATAA+TGG + chr1_4:72394328-72394347 Msa0183450:CDS 35.0%
GTCCAAAGTTAAGGAATTGT+TGG + chr1_4:72394361-72394380 Msa0183450:CDS 35.0%
AGCCAACAATTCCTTAACTT+TGG - chr1_4:72394366-72394385 None:intergenic 35.0%
ATAGTGAAATGGAATCACTG+AGG + chr1_4:72394513-72394532 Msa0183450:CDS 35.0%
TGAGATGAAGTCATCTGATT+TGG + chr1_4:72394637-72394656 Msa0183450:CDS 35.0%
GCTATCCAAATTATCAACCT+TGG - chr1_4:72394687-72394706 None:intergenic 35.0%
!! AGTTAATGCTTTTTGCTGGT+TGG - chr1_4:72394932-72394951 None:intergenic 35.0%
TTGTACTGCAATTGATGCAT+TGG - chr1_4:72394971-72394990 None:intergenic 35.0%
AGTACAATAGAGACTAGAGT+TGG + chr1_4:72394984-72395003 Msa0183450:three_prime_UTR 35.0%
CTTGTATGCGGAAAATAACT+TGG - chr1_4:72395015-72395034 None:intergenic 35.0%
CATACTGTTTAATCTCTTGG+GGG + chr1_4:72395036-72395055 Msa0183450:three_prime_UTR 35.0%
TACTTTATGTTTGGATGCTG+AGG + chr1_4:72395136-72395155 Msa0183450:three_prime_UTR 35.0%
ACTTTATGTTTGGATGCTGA+GGG + chr1_4:72395137-72395156 Msa0183450:three_prime_UTR 35.0%
!! GACCATATGGCTTTGTTTGA+TGG - chr1_4:72391166-72391185 None:intergenic 40.0%
! ATGGTGATGAGGAAGTTAGT+AGG - chr1_4:72391336-72391355 None:intergenic 40.0%
CATGTATGATGTACCTAGGA+AGG - chr1_4:72391371-72391390 None:intergenic 40.0%
!! TATGAGTTGATGGAGTCCAA+TGG + chr1_4:72391630-72391649 Msa0183450:intron 40.0%
TGGATGTAACAGTTACCCTT+AGG + chr1_4:72391915-72391934 Msa0183450:intron 40.0%
TTTGCTACAAACCAGCCTAA+GGG - chr1_4:72391933-72391952 None:intergenic 40.0%
ACACAGTTTGGCATAACTCT+TGG - chr1_4:72391998-72392017 None:intergenic 40.0%
ATACGATGGCCTCTTTGAAT+TGG + chr1_4:72392152-72392171 Msa0183450:intron 40.0%
AAACACCATTTCTGCGTTGT+TGG + chr1_4:72392330-72392349 Msa0183450:intron 40.0%
TATGACCAACAACGCAGAAA+TGG - chr1_4:72392338-72392357 None:intergenic 40.0%
AACACCTTTGCGAAAAGCTT+TGG - chr1_4:72392664-72392683 None:intergenic 40.0%
GAAGAAAAACACATGCACTC+AGG + chr1_4:72392714-72392733 Msa0183450:CDS 40.0%
TTTACATCACACGCATGGTA+AGG - chr1_4:72392759-72392778 None:intergenic 40.0%
CACTGGTATGAACTCATTGA+TGG - chr1_4:72393151-72393170 None:intergenic 40.0%
TTTGGGAACTCATTGTCTAG+AGG - chr1_4:72393255-72393274 None:intergenic 40.0%
! ATAAATGGCGCCAATTTTGG+AGG - chr1_4:72393535-72393554 None:intergenic 40.0%
! GAGATAAATGGCGCCAATTT+TGG - chr1_4:72393538-72393557 None:intergenic 40.0%
AATGAGATAGTACCAGCTTC+TGG + chr1_4:72393618-72393637 Msa0183450:CDS 40.0%
AAGAGGATGTGAGAAAAGAG+AGG - chr1_4:72393679-72393698 None:intergenic 40.0%
TACCAGACAACTAACTAACC+TGG - chr1_4:72393849-72393868 None:intergenic 40.0%
GTCTCTTGCCATTGTATCTT+TGG + chr1_4:72393904-72393923 Msa0183450:intron 40.0%
CAATGACAAAGTCCAACCAA+AGG + chr1_4:72393935-72393954 Msa0183450:CDS 40.0%
AGATTCTCAGAACCATCCTT+TGG - chr1_4:72393954-72393973 None:intergenic 40.0%
!! TTGATTTGTCTGTATCTGGC+CGG - chr1_4:72393979-72393998 None:intergenic 40.0%
!! CTGCTTGATTTGTCTGTATC+TGG - chr1_4:72393983-72394002 None:intergenic 40.0%
CAGATACAGACAAATCAAGC+AGG + chr1_4:72393981-72394000 Msa0183450:CDS 40.0%
! TGATGTGCTCCATGATAATG+AGG + chr1_4:72394106-72394125 Msa0183450:CDS 40.0%
CATCACTGTCCTCATTATCA+TGG - chr1_4:72394118-72394137 None:intergenic 40.0%
TTCACATGGTATCTTCCAAC+CGG - chr1_4:72394182-72394201 None:intergenic 40.0%
GTCAAAGATAGATTGCAGGA+TGG - chr1_4:72394219-72394238 None:intergenic 40.0%
TATAGGAGAAAGCTGCCATT+TGG + chr1_4:72394250-72394269 Msa0183450:CDS 40.0%
! AGAAAGCTGCCATTTGGAAT+CGG + chr1_4:72394256-72394275 Msa0183450:CDS 40.0%
! ATTTGGAATCGGTTGTGATG+CGG + chr1_4:72394267-72394286 Msa0183450:CDS 40.0%
! TTGAGGTTGATTGCAACTCT+TGG - chr1_4:72394325-72394344 None:intergenic 40.0%
!! CATCTGATTTGGAGAAGAAC+AGG + chr1_4:72394648-72394667 Msa0183450:CDS 40.0%
CAGGCTATCTATCAAATCCA+AGG + chr1_4:72394667-72394686 Msa0183450:CDS 40.0%
TTTGGATAGCAGATCATTGC+TGG + chr1_4:72394697-72394716 Msa0183450:CDS 40.0%
CTTTATGTTTGGATGCTGAG+GGG + chr1_4:72395138-72395157 Msa0183450:three_prime_UTR 40.0%
TTTATGTTTGGATGCTGAGG+GGG + chr1_4:72395139-72395158 Msa0183450:three_prime_UTR 40.0%
! AGTCAAAGACGATGGTGATG+AGG - chr1_4:72391347-72391366 None:intergenic 45.0%
AGGAAGGAAGTCAAAGACGA+TGG - chr1_4:72391355-72391374 None:intergenic 45.0%
! TCGTCTTTGACTTCCTTCCT+AGG + chr1_4:72391355-72391374 Msa0183450:five_prime_UTR 45.0%
GTCCAATGGTGTGATGATAC+AGG + chr1_4:72391644-72391663 Msa0183450:intron 45.0%
CACCTGTATCATCACACCAT+TGG - chr1_4:72391649-72391668 None:intergenic 45.0%
GGTGTGATGATACAGGTGAT+TGG + chr1_4:72391651-72391670 Msa0183450:intron 45.0%
TGTAACAGTTACCCTTAGGC+TGG + chr1_4:72391919-72391938 Msa0183450:intron 45.0%
CTTTGCTACAAACCAGCCTA+AGG - chr1_4:72391934-72391953 None:intergenic 45.0%
!! CTTAGGCTGGTTTGTAGCAA+AGG + chr1_4:72391932-72391951 Msa0183450:five_prime_UTR 45.0%
GTTTGTAGCAAAGGTGAGGA+AGG + chr1_4:72391941-72391960 Msa0183450:five_prime_UTR 45.0%
AGGTGAGACTTGCATAGAGA+TGG + chr1_4:72391961-72391980 Msa0183450:exon 45.0%
GGCAATTTACATCACACGCA+TGG - chr1_4:72392764-72392783 None:intergenic 45.0%
! CAGCTCCAGACATTCTTTTC+TGG - chr1_4:72392785-72392804 None:intergenic 45.0%
! AGAATGTCTGGAGCTGATTC+AGG + chr1_4:72392789-72392808 Msa0183450:CDS 45.0%
GGAGCCATAGCTCTTAGAAA+AGG + chr1_4:72393198-72393217 Msa0183450:intron 45.0%
CTATCAAGAACTGGGAGTTC+AGG - chr1_4:72393504-72393523 None:intergenic 45.0%
CCGGAACACTATCAAGAACT+GGG - chr1_4:72393512-72393531 None:intergenic 45.0%
!! CCCAGTTCTTGATAGTGTTC+CGG + chr1_4:72393509-72393528 Msa0183450:CDS 45.0%
GTATGTAGTTCACCAGAAGC+TGG - chr1_4:72393633-72393652 None:intergenic 45.0%
! AGCCAGGTTAGTTAGTTGTC+TGG + chr1_4:72393844-72393863 Msa0183450:intron 45.0%
ACAGGCTGCCAAAGATACAA+TGG - chr1_4:72393915-72393934 None:intergenic 45.0%
GGTTGGACTTTGTCATTGAC+AGG - chr1_4:72393933-72393952 None:intergenic 45.0%
GACAAAGTCCAACCAAAGGA+TGG + chr1_4:72393939-72393958 Msa0183450:CDS 45.0%
TCTCAGAACCATCCTTTGGT+TGG - chr1_4:72393950-72393969 None:intergenic 45.0%
!! GATGGTTCTGAGAATCTTGC+CGG + chr1_4:72393957-72393976 Msa0183450:CDS 45.0%
GAAGGTCTAACTACATCAGC+TGG + chr1_4:72394059-72394078 Msa0183450:CDS 45.0%
! TGAGGACAGTGATGATGAAG+AGG + chr1_4:72394124-72394143 Msa0183450:CDS 45.0%
! GAGGACAGTGATGATGAAGA+GGG + chr1_4:72394125-72394144 Msa0183450:CDS 45.0%
GGTTGGAAGATACCATGTGA+AGG + chr1_4:72394181-72394200 Msa0183450:CDS 45.0%
GAGCAAAGCTTTCCTTCACA+TGG - chr1_4:72394196-72394215 None:intergenic 45.0%
! GCATCACAACCGATTCCAAA+TGG - chr1_4:72394268-72394287 None:intergenic 45.0%
! GGCTGACTCTGATAGTGAAA+TGG + chr1_4:72394502-72394521 Msa0183450:CDS 45.0%
TTTGACTCAGAAAGAACGGG+AGG + chr1_4:72394562-72394581 Msa0183450:CDS 45.0%
ACCTTAAACGTCTTGGAACC+AGG + chr1_4:72394875-72394894 Msa0183450:three_prime_UTR 45.0%
! TCTTGGAACCAGGCCAATTT+TGG + chr1_4:72394885-72394904 Msa0183450:three_prime_UTR 45.0%
TCGCAAAGCTGCTCCAAAAT+TGG - chr1_4:72394901-72394920 None:intergenic 45.0%
!! GCTGGTTTGTAGCAAAGGTG+AGG + chr1_4:72391937-72391956 Msa0183450:five_prime_UTR 50.0%
GCCGGAACACTATCAAGAAC+TGG - chr1_4:72393513-72393532 None:intergenic 50.0%
AGTGTTCCGGCCTCCAAAAT+TGG + chr1_4:72393522-72393541 Msa0183450:CDS 50.0%
CGCCATTTATCTCGCTGATG+CGG + chr1_4:72393545-72393564 Msa0183450:CDS 50.0%
TGCCGCATCAGCGAGATAAA+TGG - chr1_4:72393550-72393569 None:intergenic 50.0%
! ACATAGATGGTGTCAGAGCC+AGG + chr1_4:72393828-72393847 Msa0183450:intron 50.0%
GGTCTAACTACATCAGCTGG+TGG + chr1_4:72394062-72394081 Msa0183450:CDS 50.0%
TGAAGAGGGAAGTGAGTCTG+TGG + chr1_4:72394139-72394158 Msa0183450:CDS 50.0%
GCCTGGTTCCAAGACGTTTA+AGG - chr1_4:72394879-72394898 None:intergenic 50.0%
AAGCTGCTCCAAAATTGGCC+TGG - chr1_4:72394896-72394915 None:intergenic 50.0%
!! ATGGCGCCAATTTTGGAGGC+CGG - chr1_4:72393531-72393550 None:intergenic 55.0%
CATTGATGAGCACCAGTCCG+TGG + chr1_4:72394469-72394488 Msa0183450:CDS 55.0%
ATGTTTGGATGCTGAGGGGG+AGG + chr1_4:72395142-72395161 Msa0183450:three_prime_UTR 55.0%
TGTTTGGATGCTGAGGGGGA+GGG + chr1_4:72395143-72395162 Msa0183450:three_prime_UTR 55.0%
GGTTTCCGAGACGCGTGTTC+CGG + chr1_4:72394160-72394179 Msa0183450:CDS 60.0%
TCCAACCGGAACACGCGTCT+CGG - chr1_4:72394168-72394187 None:intergenic 60.0%
CTGCTCAACTTCGCGTGACG+TGG + chr1_4:72394405-72394424 Msa0183450:CDS 60.0%
TGATGAGCACCAGTCCGTGG+AGG + chr1_4:72394472-72394491 Msa0183450:CDS 60.0%
TCCGAGACGCGTGTTCCGGT+TGG + chr1_4:72394164-72394183 Msa0183450:CDS 65.0%
GTCAGCCTTCGCTGCCTCCA+CGG - chr1_4:72394489-72394508 None:intergenic 65.0%
CCTTCGCTGCCTCCACGGAC+TGG - chr1_4:72394484-72394503 None:intergenic 70.0%
CCAGTCCGTGGAGGCAGCGA+AGG + chr1_4:72394481-72394500 Msa0183450:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 72391062 72395205 72391062 ID=Msa0183450;Name=Msa0183450
chr1_4 mRNA 72391062 72395205 72391062 ID=Msa0183450-mRNA-1;Parent=Msa0183450;Name=Msa0183450-mRNA-1;_AED=0.24;_eAED=0.24;_QI=368|1|1|1|0.75|0.6|5|472|430
chr1_4 exon 72391062 72391376 72391062 ID=Msa0183450-mRNA-1:exon:24470;Parent=Msa0183450-mRNA-1
chr1_4 exon 72391927 72392112 72391927 ID=Msa0183450-mRNA-1:exon:24471;Parent=Msa0183450-mRNA-1
chr1_4 exon 72392667 72392810 72392667 ID=Msa0183450-mRNA-1:exon:24472;Parent=Msa0183450-mRNA-1
chr1_4 exon 72393454 72393665 72393454 ID=Msa0183450-mRNA-1:exon:24473;Parent=Msa0183450-mRNA-1
chr1_4 exon 72393930 72395205 72393930 ID=Msa0183450-mRNA-1:exon:24474;Parent=Msa0183450-mRNA-1
chr1_4 five_prime_UTR 72391062 72391376 72391062 ID=Msa0183450-mRNA-1:five_prime_utr;Parent=Msa0183450-mRNA-1
chr1_4 five_prime_UTR 72391927 72391979 72391927 ID=Msa0183450-mRNA-1:five_prime_utr;Parent=Msa0183450-mRNA-1
chr1_4 CDS 72391980 72392112 72391980 ID=Msa0183450-mRNA-1:cds;Parent=Msa0183450-mRNA-1
chr1_4 CDS 72392667 72392810 72392667 ID=Msa0183450-mRNA-1:cds;Parent=Msa0183450-mRNA-1
chr1_4 CDS 72393454 72393665 72393454 ID=Msa0183450-mRNA-1:cds;Parent=Msa0183450-mRNA-1
chr1_4 CDS 72393930 72394733 72393930 ID=Msa0183450-mRNA-1:cds;Parent=Msa0183450-mRNA-1
chr1_4 three_prime_UTR 72394734 72395205 72394734 ID=Msa0183450-mRNA-1:three_prime_utr;Parent=Msa0183450-mRNA-1
Gene Sequence

>Msa0183450

ATGGCTCAGAAGAATCCAAGAGTTATGCCAAACTGTGTATATGCTTCTAATCCCTACCATGAATGCACTCAAAATTGCATCCACAAGATCAAGGAAATCAATTCCAAGCCACCTAAAAATAAAAAGGGATCTGCTTTTCGCAAAGGTGTTATAGAAAGTGAGATAGGCAAAAAGATGAACGAAGAAAAACACATGCACTCAGGATGTCCCAAAGCATCTAATCCTTACCATGCGTGTGATGTAAATTGCCAGAAAAGAATGTCTGGAGCTGATTCAGGTGTCATTCCATTATCCTTTGACAGGAAAAAGAAGCTAGGTTCTAGACCTGAACTCCCAGTTCTTGATAGTGTTCCGGCCTCCAAAATTGGCGCCATTTATCTCGCTGATGCGGCATCACCAATATCAAAATATTATGACAAGAAAAAGTTGGAACCGAAAAGCAATGAGATAGTACCAGCTTCTGGTGAACTACATACTCTAGATGTCAAGCCTGTCAATGACAAAGTCCAACCAAAGGATGGTTCTGAGAATCTTGCCGGCCAGATACAGACAAATCAAGCAGGCGACAAAAACTCTTCAAACAAAGTTGTTCCAGTAACCTGTTTTGATGACATTGGAGAAGGTCTAACTACATCAGCTGGTGGATCCAAGCACTTTTGTTATTCTGATGTGCTCCATGATAATGAGGACAGTGATGATGAAGAGGGAAGTGAGTCTGTGGTTTCCGAGACGCGTGTTCCGGTTGGAAGATACCATGTGAAGGAAAGCTTTGCTCCCATCCTGCAATCTATCTTTGACAAGTATGGTGATATAGGAGAAAGCTGCCATTTGGAATCGGTTGTGATGCGGTCTTATTACATCGAGTGTGTGTGCTTTGTGATCCAAGAGTTGCAATCAACCTCAATAATGGAATTAACAAAGTCCAAAGTTAAGGAATTGTTGGCTATTCTTAATGATGTAGAGTCTGCTCAACTTCGCGTGACGTGGTTGCGTACTGTCGTCAATGAAATTGCTGAAAACATCAAACTCATTGATGAGCACCAGTCCGTGGAGGCAGCGAAGGCTGACTCTGATAGTGAAATGGAATCACTGAGGAAAGAACTAGAATCAAAAATGGAAATTTTGACTCAGAAAGAACGGGAGGTAACTGATATTAAAACAAAAATTGAAGGGATTAGAGAGCGACTCAGCGAGCTTGAGATGAAGTCATCTGATTTGGAGAAGAACAGGCTATCTATCAAATCCAAGGTTGATAATTTGGATAGCAGATCATTGCTGGATGAACTACTTTAA
Protein sequence

>Msa0183450

MAQKNPRVMPNCVYASNPYHECTQNCIHKIKEINSKPPKNKKGSAFRKGVIESEIGKKMNEEKHMHSGCPKASNPYHACDVNCQKRMSGADSGVIPLSFDRKKKLGSRPELPVLDSVPASKIGAIYLADAASPISKYYDKKKLEPKSNEIVPASGELHTLDVKPVNDKVQPKDGSENLAGQIQTNQAGDKNSSNKVVPVTCFDDIGEGLTTSAGGSKHFCYSDVLHDNEDSDDEEGSESVVSETRVPVGRYHVKESFAPILQSIFDKYGDIGESCHLESVVMRSYYIECVCFVIQELQSTSIMELTKSKVKELLAILNDVESAQLRVTWLRTVVNEIAENIKLIDEHQSVEAAKADSDSEMESLRKELESKMEILTQKEREVTDIKTKIEGIRERLSELEMKSSDLEKNRLSIKSKVDNLDSRSLLDELL*