Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090970 | A0A072VRU0 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa0090970 | 0.801836 | 7.462437e-49 | -8.615850e-47 |
| Msa0015090 | Msa0090970 | 0.807181 | 5.730958e-50 | -8.615850e-47 |
| Msa0017320 | Msa0090970 | 0.821860 | 3.225382e-53 | -8.615850e-47 |
| Msa0023330 | Msa0090970 | 0.813996 | 1.929277e-51 | -8.615850e-47 |
| Msa0049750 | Msa0090970 | 0.814094 | 1.835363e-51 | -8.615850e-47 |
| Msa0060070 | Msa0090970 | 0.813049 | 3.116156e-51 | -8.615850e-47 |
| Msa0061500 | Msa0090970 | 0.804576 | 2.021557e-49 | -8.615850e-47 |
| Msa0086420 | Msa0090970 | 0.800100 | 1.688553e-48 | -8.615850e-47 |
| Msa0090970 | Msa0092410 | 0.807140 | 5.844698e-50 | -8.615850e-47 |
| Msa0090970 | Msa0098290 | 0.817392 | 3.376541e-52 | -8.615850e-47 |
| Msa0090970 | Msa0102140 | 0.801245 | 9.862416e-49 | -8.615850e-47 |
| Msa0090970 | Msa0103480 | 0.803348 | 3.638662e-49 | -8.615850e-47 |
| Msa0090970 | Msa0111080 | 0.871321 | 7.468505e-67 | -8.615850e-47 |
| Msa0090970 | Msa0117520 | 0.839175 | 1.854367e-57 | -8.615850e-47 |
| Msa0090970 | Msa0130850 | 0.812941 | 3.289669e-51 | -8.615850e-47 |
| Msa0090970 | Msa0136630 | 0.842958 | 1.880772e-58 | -8.615850e-47 |
| Msa0090970 | Msa0138020 | 0.801585 | 8.400857e-49 | -8.615850e-47 |
| Msa0090970 | Msa0142280 | 0.818838 | 1.590389e-52 | -8.615850e-47 |
| Msa0090970 | Msa0142500 | 0.836842 | 7.381052e-57 | -8.615850e-47 |
| Msa0090970 | Msa0152560 | 0.850451 | 1.683942e-60 | -8.615850e-47 |
| Msa0090970 | Msa0154920 | 0.854748 | 1.001126e-61 | -8.615850e-47 |
| Msa0090970 | Msa0160960 | 0.853277 | 2.658057e-61 | -8.615850e-47 |
| Msa0090970 | Msa0183450 | 0.984403 | 1.854384e-160 | -8.615850e-47 |
| Msa0090970 | Msa0186950 | 0.809076 | 2.262223e-50 | -8.615850e-47 |
| Msa0090970 | Msa0187310 | 0.803481 | 3.415370e-49 | -8.615850e-47 |
| Msa0090970 | Msa0187490 | 0.840616 | 7.813137e-58 | -8.615850e-47 |
| Msa0090970 | Msa0187830 | 0.800314 | 1.527409e-48 | -8.615850e-47 |
| Msa0090970 | Msa0189610 | 0.801310 | 9.562642e-49 | -8.615850e-47 |
| Msa0090970 | Msa0196670 | 0.803929 | 2.757256e-49 | -8.615850e-47 |
| Msa0090970 | Msa0222980 | 0.812205 | 4.767191e-51 | -8.615850e-47 |
| Msa0090970 | Msa0233370 | 0.803407 | 3.537354e-49 | -8.615850e-47 |
| Msa0090970 | Msa0240270 | 0.818347 | 2.055111e-52 | -8.615850e-47 |
| Msa0090970 | Msa0240300 | 0.801030 | 1.091194e-48 | -8.615850e-47 |
| Msa0090970 | Msa0243320 | 0.810487 | 1.125046e-50 | -8.615850e-47 |
| Msa0090970 | Msa0264310 | 0.806183 | 9.310396e-50 | -8.615850e-47 |
| Msa0090970 | Msa0269560 | 0.811152 | 8.077414e-51 | -8.615850e-47 |
| Msa0090970 | Msa0273770 | 0.810728 | 9.977787e-51 | -8.615850e-47 |
| Msa0090970 | Msa0299660 | 0.837995 | 3.740687e-57 | -8.615850e-47 |
| Msa0090970 | Msa0307960 | 0.821869 | 3.210203e-53 | -8.615850e-47 |
| Msa0090970 | Msa0308440 | 0.802731 | 4.881393e-49 | -8.615850e-47 |
| Msa0090970 | Msa0308560 | 0.812711 | 3.695113e-51 | -8.615850e-47 |
| Msa0090970 | Msa0317960 | 0.802029 | 6.810415e-49 | -8.615850e-47 |
| Msa0090970 | Msa0319290 | 0.813056 | 3.104748e-51 | -8.615850e-47 |
| Msa0090970 | Msa0322680 | 0.807671 | 4.511435e-50 | -8.615850e-47 |
| Msa0090970 | Msa0347750 | 0.820884 | 5.418642e-53 | -8.615850e-47 |
| Msa0090970 | Msa0347950 | 0.804895 | 1.734418e-49 | -8.615850e-47 |
| Msa0090970 | Msa0347990 | 0.804121 | 2.514242e-49 | -8.615850e-47 |
| Msa0090970 | Msa0362890 | 0.800975 | 1.119694e-48 | -8.615850e-47 |
| Msa0090970 | Msa0364790 | 0.810142 | 1.335187e-50 | -8.615850e-47 |
| Msa0090970 | Msa0376420 | 0.811347 | 7.326916e-51 | -8.615850e-47 |
| Msa0090970 | Msa0380600 | 0.823863 | 1.101758e-53 | -8.615850e-47 |
| Msa0090970 | Msa0382310 | 0.821101 | 4.827563e-53 | -8.615850e-47 |
| Msa0090970 | Msa0388730 | 0.831134 | 1.982430e-55 | -8.615850e-47 |
| Msa0090970 | Msa0395750 | 0.806606 | 7.579814e-50 | -8.615850e-47 |
| Msa0090970 | Msa0395980 | 0.804708 | 1.897093e-49 | -8.615850e-47 |
| Msa0090970 | Msa0403490 | 0.879612 | 1.080872e-69 | -8.615850e-47 |
| Msa0090970 | Msa0414140 | 0.813298 | 2.747866e-51 | -8.615850e-47 |
| Msa0090970 | Msa0427580 | 0.821018 | 5.045139e-53 | -8.615850e-47 |
| Msa0090970 | Msa0430240 | 0.824774 | 6.725342e-54 | -8.615850e-47 |
| Msa0090970 | Msa0431210 | 0.829934 | 3.898457e-55 | -8.615850e-47 |
| Msa0090970 | Msa0432160 | 0.801768 | 7.706511e-49 | -8.615850e-47 |
| Msa0090970 | Msa0432500 | 0.804484 | 2.112809e-49 | -8.615850e-47 |
| Msa0090970 | Msa0440510 | 0.812347 | 4.438114e-51 | -8.615850e-47 |
| Msa0090970 | Msa0457990 | 0.801597 | 8.351299e-49 | -8.615850e-47 |
| Msa0090970 | Msa0470880 | 0.801172 | 1.020547e-48 | -8.615850e-47 |
| Msa0090970 | Msa0476680 | 0.805693 | 1.180015e-49 | -8.615850e-47 |
| Msa0090970 | Msa0482180 | 0.811627 | 6.370559e-51 | -8.615850e-47 |
| Msa0090970 | Msa0482940 | 0.810424 | 1.160827e-50 | -8.615850e-47 |
| Msa0090970 | Msa0491000 | 0.803732 | 3.028913e-49 | -8.615850e-47 |
| Msa0090970 | Msa0516240 | 0.812373 | 4.379478e-51 | -8.615850e-47 |
| Msa0090970 | Msa0518170 | 0.844370 | 7.885181e-59 | -8.615850e-47 |
| Msa0090970 | Msa0520270 | 0.826930 | 2.069818e-54 | -8.615850e-47 |
| Msa0090970 | Msa0521010 | 0.807304 | 5.396061e-50 | -8.615850e-47 |
| Msa0090970 | Msa0527740 | 0.830474 | 2.877194e-55 | -8.615850e-47 |
| Msa0090970 | Msa0529870 | 0.801804 | 7.574564e-49 | -8.615850e-47 |
| Msa0090970 | Msa0545050 | 0.823558 | 1.298573e-53 | -8.615850e-47 |
| Msa0090970 | Msa0561240 | 0.804809 | 1.807326e-49 | -8.615850e-47 |
| Msa0090970 | Msa0566350 | 0.836661 | 8.211445e-57 | -8.615850e-47 |
| Msa0090970 | Msa0566750 | 0.849330 | 3.466207e-60 | -8.615850e-47 |
| Msa0090970 | Msa0569780 | 0.823454 | 1.373144e-53 | -8.615850e-47 |
| Msa0090970 | Msa0573890 | 0.821919 | 3.124679e-53 | -8.615850e-47 |
| Msa0090970 | Msa0581400 | 0.816308 | 5.913140e-52 | -8.615850e-47 |
| Msa0090970 | Msa0585070 | 0.803516 | 3.359144e-49 | -8.615850e-47 |
| Msa0090970 | Msa0600590 | 0.801196 | 1.008989e-48 | -8.615850e-47 |
| Msa0090970 | Msa0616200 | 0.817933 | 2.550457e-52 | -8.615850e-47 |
| Msa0090970 | Msa0624060 | 0.812215 | 4.743133e-51 | -8.615850e-47 |
| Msa0090970 | Msa0641130 | 0.816239 | 6.125605e-52 | -8.615850e-47 |
| Msa0090970 | Msa0641340 | 0.810751 | 9.865224e-51 | -8.615850e-47 |
| Msa0090970 | Msa0657120 | 0.824787 | 6.678783e-54 | -8.615850e-47 |
| Msa0090970 | Msa0658680 | 0.825016 | 5.896826e-54 | -8.615850e-47 |
| Msa0090970 | Msa0662540 | 0.802634 | 5.111571e-49 | -8.615850e-47 |
| Msa0090970 | Msa0686080 | 0.810179 | 1.310620e-50 | -8.615850e-47 |
| Msa0090970 | Msa0701100 | 0.808579 | 2.889600e-50 | -8.615850e-47 |
| Msa0090970 | Msa0705990 | 0.815033 | 1.137483e-51 | -8.615850e-47 |
| Msa0090970 | Msa0724370 | 0.813740 | 2.196980e-51 | -8.615850e-47 |
| Msa0090970 | Msa0746170 | 0.818333 | 2.070290e-52 | -8.615850e-47 |
| Msa0090970 | Msa0746210 | 0.814671 | 1.368375e-51 | -8.615850e-47 |
| Msa0090970 | Msa0750810 | 0.819245 | 1.285148e-52 | -8.615850e-47 |
| Msa0090970 | Msa0750850 | 0.823963 | 1.043637e-53 | -8.615850e-47 |
| Msa0090970 | Msa0753400 | 0.800911 | 1.154042e-48 | -8.615850e-47 |
| Msa0090970 | Msa0756380 | 0.819547 | 1.096606e-52 | -8.615850e-47 |
| Msa0090970 | Msa0763890 | 0.805616 | 1.224658e-49 | -8.615850e-47 |
| Msa0090970 | Msa0763920 | 0.815672 | 8.199730e-52 | -8.615850e-47 |
| Msa0090970 | Msa0767370 | 0.809178 | 2.151846e-50 | -8.615850e-47 |
| Msa0090970 | Msa0772280 | 0.803124 | 4.048768e-49 | -8.615850e-47 |
| Msa0090970 | Msa0775560 | 0.814594 | 1.422790e-51 | -8.615850e-47 |
| Msa0090970 | Msa0789560 | 0.819122 | 1.370893e-52 | -8.615850e-47 |
| Msa0090970 | Msa0794210 | 0.824476 | 7.905130e-54 | -8.615850e-47 |
| Msa0090970 | Msa0812950 | 0.823972 | 1.038774e-53 | -8.615850e-47 |
| Msa0090970 | Msa0853440 | 0.814385 | 1.582546e-51 | -8.615850e-47 |
| Msa0090970 | Msa0861470 | 0.805092 | 1.576903e-49 | -8.615850e-47 |
| Msa0090970 | Msa0861570 | 0.809579 | 1.765030e-50 | -8.615850e-47 |
| Msa0090970 | Msa0880810 | 0.816497 | 5.365264e-52 | -8.615850e-47 |
| Msa0090970 | Msa0907850 | 0.802932 | 4.435871e-49 | -8.615850e-47 |
| Msa0090970 | Msa0910620 | 0.847278 | 1.279750e-59 | -8.615850e-47 |
| Msa0090970 | Msa0960390 | 0.802126 | 6.504195e-49 | -8.615850e-47 |
| Msa0090970 | Msa0970480 | 0.844179 | 8.871310e-59 | -8.615850e-47 |
| Msa0090970 | Msa0985180 | 0.832234 | 1.061988e-55 | -8.615850e-47 |
| Msa0090970 | Msa0994370 | 0.800603 | 1.334015e-48 | -8.615850e-47 |
| Msa0090970 | Msa0994910 | 0.815441 | 9.229673e-52 | -8.615850e-47 |
| Msa0090970 | Msa1013070 | 0.805221 | 1.482084e-49 | -8.615850e-47 |
| Msa0090970 | Msa1022030 | 0.803105 | 4.085596e-49 | -8.615850e-47 |
| Msa0090970 | Msa1023310 | 0.811988 | 5.314151e-51 | -8.615850e-47 |
| Msa0090970 | Msa1026640 | 0.840898 | 6.589964e-58 | -8.615850e-47 |
| Msa0090970 | Msa1029620 | 0.805509 | 1.289665e-49 | -8.615850e-47 |
| Msa0090970 | Msa1042660 | 0.848692 | 5.211102e-60 | -8.615850e-47 |
| Msa0090970 | Msa1062040 | 0.818181 | 2.240794e-52 | -8.615850e-47 |
| Msa0090970 | Msa1063420 | 0.801105 | 1.053189e-48 | -8.615850e-47 |
| Msa0090970 | Msa1071320 | 0.809752 | 1.619567e-50 | -8.615850e-47 |
| Msa0090970 | Msa1072900 | 0.803519 | 3.353090e-49 | -8.615850e-47 |
| Msa0090970 | Msa1074350 | 0.819656 | 1.035927e-52 | -8.615850e-47 |
| Msa0090970 | Msa1087990 | 0.808427 | 3.113947e-50 | -8.615850e-47 |
| Msa0090970 | Msa1107200 | 0.839454 | 1.569648e-57 | -8.615850e-47 |
| Msa0090970 | Msa1137780 | 0.813910 | 2.015015e-51 | -8.615850e-47 |
| Msa0090970 | Msa1150780 | 0.816537 | 5.254737e-52 | -8.615850e-47 |
| Msa0090970 | Msa1205590 | 0.803009 | 4.276108e-49 | -8.615850e-47 |
| Msa0090970 | Msa1209190 | 0.874963 | 4.475251e-68 | -8.615850e-47 |
| Msa0090970 | Msa1209860 | 0.870994 | 9.580807e-67 | -8.615850e-47 |
| Msa0090970 | Msa1214170 | 0.827418 | 1.582117e-54 | -8.615850e-47 |
| Msa0090970 | Msa1218580 | 0.815858 | 7.452429e-52 | -8.615850e-47 |
| Msa0090970 | Msa1221330 | 0.823433 | 1.388645e-53 | -8.615850e-47 |
| Msa0090970 | Msa1224200 | 0.812719 | 3.680677e-51 | -8.615850e-47 |
| Msa0090970 | Msa1225600 | 0.820661 | 6.097365e-53 | -8.615850e-47 |
| Msa0090970 | Msa1229480 | 0.824401 | 8.233674e-54 | -8.615850e-47 |
| Msa0090970 | Msa1236440 | 0.843565 | 1.295752e-58 | -8.615850e-47 |
| Msa0090970 | Msa1250110 | 0.840805 | 6.968067e-58 | -8.615850e-47 |
| Msa0090970 | Msa1250730 | 0.834760 | 2.487249e-56 | -8.615850e-47 |
| Msa0090970 | Msa1259860 | 0.807390 | 5.174088e-50 | -8.615850e-47 |
| Msa0090970 | Msa1260680 | 0.837269 | 5.741986e-57 | -8.615850e-47 |
| Msa0090970 | Msa1270660 | 0.820957 | 5.212992e-53 | -8.615850e-47 |
| Msa0090970 | Msa1270730 | 0.821068 | 4.913590e-53 | -8.615850e-47 |
| Msa0090970 | Msa1277670 | 0.837826 | 4.133613e-57 | -8.615850e-47 |
| Msa0090970 | Msa1280170 | 0.816467 | 5.448609e-52 | -8.615850e-47 |
| Msa0090970 | Msa1291450 | 0.815929 | 7.186961e-52 | -8.615850e-47 |
| Msa0090970 | Msa1297530 | 0.817730 | 2.833976e-52 | -8.615850e-47 |
| Msa0090970 | Msa1307180 | 0.829430 | 5.169877e-55 | -8.615850e-47 |
| Msa0090970 | Msa1316360 | 0.819787 | 9.669660e-53 | -8.615850e-47 |
| Msa0090970 | Msa1316630 | 0.822938 | 1.812355e-53 | -8.615850e-47 |
| Msa0090970 | Msa1332050 | 0.808108 | 3.641791e-50 | -8.615850e-47 |
| Msa0090970 | Msa1335230 | 0.824588 | 7.441858e-54 | -8.615850e-47 |
| Msa0090970 | Msa1355890 | 0.807230 | 5.595954e-50 | -8.615850e-47 |
| Msa0090970 | Msa1360020 | 0.825591 | 4.311135e-54 | -8.615850e-47 |
| Msa0090970 | Msa1369920 | -0.829681 | 4.493070e-55 | -8.615850e-47 |
| Msa0090970 | Msa1370590 | 0.811420 | 7.064168e-51 | -8.615850e-47 |
| Msa0090970 | Msa1378410 | 0.812273 | 4.607037e-51 | -8.615850e-47 |
| Msa0090970 | Msa1382020 | 0.809002 | 2.346244e-50 | -8.615850e-47 |
| Msa0090970 | Msa1384100 | 0.811692 | 6.165022e-51 | -8.615850e-47 |
| Msa0090970 | Msa1400930 | 0.875961 | 2.038625e-68 | -8.615850e-47 |
| Msa0090970 | Msa1419840 | 0.809533 | 1.805053e-50 | -8.615850e-47 |
| Msa0090970 | Msa1421210 | 0.811273 | 7.602898e-51 | -8.615850e-47 |
| Msa0090970 | Msa1425260 | 0.807842 | 4.148627e-50 | -8.615850e-47 |
| Msa0090970 | Msa1428780 | 0.857731 | 1.337001e-62 | -8.615850e-47 |
| Msa0090970 | Msa1430130 | 0.807019 | 6.200738e-50 | -8.615850e-47 |
| Msa0090970 | Msa1430550 | 0.814276 | 1.672627e-51 | -8.615850e-47 |
| Msa0090970 | Msa1434040 | 0.806618 | 7.538168e-50 | -8.615850e-47 |
| Msa0090970 | Msa1436600 | 0.810306 | 1.230625e-50 | -8.615850e-47 |
| Msa0090970 | Msa1437330 | 0.811492 | 6.815027e-51 | -8.615850e-47 |
| Msa0090970 | Msa1438840 | 0.819870 | 9.255762e-53 | -8.615850e-47 |
| Msa0090970 | Msa1442790 | 0.804290 | 2.318870e-49 | -8.615850e-47 |
| Msa0090970 | Msa1444120 | 0.815197 | 1.045769e-51 | -8.615850e-47 |
| Msa0090970 | Msa1460750 | 0.805934 | 1.050161e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090970 | MtrunA17_Chr1g0211071 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 853 |
| Msa0090970 | MtrunA17_Chr3g0145681 | 46.588 | 425 | 165 | 14 | 12 | 420 | 6 | 384 | 1.05e-86 | 269 |
| Msa0090970 | MtrunA17_Chr8g0381161 | 28.708 | 209 | 135 | 4 | 232 | 430 | 208 | 412 | 2.55e-14 | 74.3 |
| Msa0090970 | MtrunA17_Chr2g0277291 | 29.082 | 196 | 122 | 5 | 248 | 430 | 194 | 385 | 9.46e-13 | 69.3 |
| Msa0090970 | MtrunA17_Chr8g0381111 | 27.647 | 170 | 108 | 2 | 176 | 332 | 226 | 393 | 4.98e-12 | 67.8 |
| Msa0090970 | MtrunA17_Chr8g0381141 | 27.647 | 170 | 108 | 2 | 176 | 332 | 167 | 334 | 6.50e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090970 | AT2G16900.5 | 30.340 | 412 | 217 | 13 | 59 | 430 | 1 | 382 | 6.58e-40 | 147 |
| Msa0090970 | AT2G16900.6 | 30.340 | 412 | 217 | 13 | 59 | 430 | 1 | 382 | 6.58e-40 | 147 |
| Msa0090970 | AT2G16900.1 | 30.340 | 412 | 217 | 13 | 59 | 430 | 1 | 382 | 6.58e-40 | 147 |
| Msa0090970 | AT4G35110.1 | 39.896 | 193 | 106 | 2 | 238 | 430 | 204 | 386 | 9.82e-39 | 144 |
| Msa0090970 | AT4G35110.2 | 39.896 | 193 | 106 | 2 | 238 | 430 | 204 | 386 | 9.82e-39 | 144 |
| Msa0090970 | AT4G35110.6 | 39.896 | 193 | 106 | 2 | 238 | 430 | 204 | 386 | 9.82e-39 | 144 |
| Msa0090970 | AT4G35110.5 | 39.896 | 193 | 106 | 2 | 238 | 430 | 204 | 386 | 9.82e-39 | 144 |
| Msa0090970 | AT4G35110.3 | 39.896 | 193 | 106 | 2 | 238 | 430 | 219 | 401 | 1.17e-38 | 144 |
| Msa0090970 | AT4G35110.4 | 39.896 | 193 | 106 | 2 | 238 | 430 | 216 | 398 | 1.46e-38 | 144 |
| Msa0090970 | AT2G16900.3 | 37.864 | 206 | 114 | 3 | 229 | 430 | 98 | 293 | 1.50e-35 | 133 |
| Msa0090970 | AT2G16900.4 | 37.864 | 206 | 114 | 3 | 229 | 430 | 98 | 293 | 1.50e-35 | 133 |
| Msa0090970 | AT2G16900.2 | 37.864 | 206 | 114 | 3 | 229 | 430 | 98 | 293 | 1.50e-35 | 133 |
| Msa0090970 | AT2G16900.7 | 37.864 | 206 | 114 | 3 | 229 | 430 | 98 | 293 | 1.50e-35 | 133 |
| Msa0090970 | AT4G38550.5 | 34.896 | 192 | 125 | 0 | 235 | 426 | 317 | 508 | 2.80e-34 | 134 |
| Msa0090970 | AT4G38550.4 | 34.896 | 192 | 125 | 0 | 235 | 426 | 359 | 550 | 3.75e-34 | 134 |
| Msa0090970 | AT4G38550.2 | 35.149 | 202 | 130 | 1 | 228 | 429 | 449 | 649 | 4.65e-34 | 135 |
| Msa0090970 | AT4G38550.3 | 35.176 | 199 | 128 | 1 | 228 | 426 | 412 | 609 | 4.75e-34 | 134 |
| Msa0090970 | AT4G38550.1 | 35.176 | 199 | 128 | 1 | 228 | 426 | 412 | 609 | 4.75e-34 | 134 |
| Msa0090970 | AT5G11140.1 | 36.216 | 185 | 118 | 0 | 246 | 430 | 57 | 241 | 9.78e-34 | 127 |
| Msa0090970 | AT4G38560.1 | 36.181 | 199 | 125 | 1 | 234 | 430 | 323 | 521 | 8.34e-32 | 127 |
| Msa0090970 | AT4G38560.2 | 36.181 | 199 | 125 | 1 | 234 | 430 | 325 | 523 | 9.36e-32 | 127 |
| Msa0090970 | AT2G20960.3 | 34.197 | 193 | 127 | 0 | 238 | 430 | 486 | 678 | 1.50e-31 | 127 |
| Msa0090970 | AT2G20960.2 | 34.197 | 193 | 127 | 0 | 238 | 430 | 521 | 713 | 1.90e-31 | 127 |
| Msa0090970 | AT2G20960.1 | 34.197 | 193 | 127 | 0 | 238 | 430 | 556 | 748 | 2.32e-31 | 127 |
| Msa0090970 | AT2G20960.4 | 34.197 | 193 | 127 | 0 | 238 | 430 | 556 | 748 | 2.32e-31 | 127 |
| Msa0090970 | AT2G20950.5 | 35.829 | 187 | 120 | 0 | 240 | 426 | 196 | 382 | 6.25e-28 | 114 |
| Msa0090970 | AT2G20950.9 | 35.829 | 187 | 120 | 0 | 240 | 426 | 196 | 382 | 6.25e-28 | 114 |
| Msa0090970 | AT2G20950.2 | 35.829 | 187 | 120 | 0 | 240 | 426 | 315 | 501 | 1.71e-27 | 114 |
| Msa0090970 | AT2G20950.3 | 35.829 | 187 | 120 | 0 | 240 | 426 | 317 | 503 | 1.82e-27 | 114 |
| Msa0090970 | AT2G20950.1 | 35.829 | 187 | 120 | 0 | 240 | 426 | 332 | 518 | 1.86e-27 | 114 |
| Msa0090970 | AT2G20950.4 | 35.829 | 187 | 120 | 0 | 240 | 426 | 334 | 520 | 1.86e-27 | 114 |
| Msa0090970 | AT2G20950.11 | 35.829 | 187 | 120 | 0 | 240 | 426 | 225 | 411 | 2.01e-27 | 113 |
| Msa0090970 | AT2G20950.8 | 35.829 | 187 | 120 | 0 | 240 | 426 | 359 | 545 | 2.21e-27 | 114 |
| Msa0090970 | AT2G20950.6 | 35.829 | 187 | 120 | 0 | 240 | 426 | 286 | 472 | 2.30e-27 | 114 |
| Msa0090970 | AT2G20950.14 | 35.829 | 187 | 120 | 0 | 240 | 426 | 288 | 474 | 2.70e-27 | 114 |
| Msa0090970 | AT2G20950.7 | 35.829 | 187 | 120 | 0 | 240 | 426 | 359 | 545 | 3.32e-27 | 114 |
| Msa0090970 | AT2G20950.13 | 35.829 | 187 | 120 | 0 | 240 | 426 | 315 | 501 | 4.22e-27 | 113 |
| Msa0090970 | AT2G20950.10 | 35.829 | 187 | 120 | 0 | 240 | 426 | 315 | 501 | 4.22e-27 | 113 |
| Msa0090970 | AT2G20950.12 | 35.829 | 187 | 120 | 0 | 240 | 426 | 281 | 467 | 4.26e-27 | 113 |
Find 128 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATCCAAGGTTGATAATT+TGG | 0.133061 | 1_2:+73104162 | Msa0090970:CDS |
| GCCTGGTTCCAAGACGTTTA+AGG | 0.212905 | 1_2:-73104359 | None:intergenic |
| TCTTGGAACCAGGCCAATTT+TGG | 0.212961 | 1_2:+73104368 | Msa0090970:three_prime_UTR |
| GAGATAAATGGCGCCAATTT+TGG | 0.225914 | 1_2:-73103018 | None:intergenic |
| AGTTTATATTATGACATTTC+AGG | 0.266845 | 1_2:+73104584 | Msa0090970:three_prime_UTR |
| CTGCTTGATTTGTCTGTATC+TGG | 0.275302 | 1_2:-73103463 | None:intergenic |
| AGAATGTCTGGAGCTGATTC+AGG | 0.287049 | 1_2:+73102271 | Msa0090970:CDS |
| TCGCAAAGCTGCTCCAAAAT+TGG | 0.297229 | 1_2:-73104381 | None:intergenic |
| AAACCTGTTACTGTTTCATT+TGG | 0.304219 | 1_2:+73100782 | Msa0090970:five_prime_UTR |
| GACATACTGTTTAATCTCTT+GGG | 0.310133 | 1_2:+73104517 | Msa0090970:three_prime_UTR |
| CAATCTATCTTTGACAAGTA+TGG | 0.311439 | 1_2:+73103707 | Msa0090970:CDS |
| TGAGATGAAGTCATCTGATT+TGG | 0.311588 | 1_2:+73104120 | Msa0090970:CDS |
| TTATTTATTTACTTTATGTT+TGG | 0.322958 | 1_2:+73104618 | Msa0090970:three_prime_UTR |
| GACCATATGGCTTTGTTTGA+TGG | 0.324094 | 1_2:-73100647 | None:intergenic |
| TTTCCAAATGAAACAGTAAC+AGG | 0.332312 | 1_2:-73100785 | None:intergenic |
| ATGGCTTTGTTTGATGGTTA+TGG | 0.347436 | 1_2:-73100641 | None:intergenic |
| AGACATACTGTTTAATCTCT+TGG | 0.350486 | 1_2:+73104516 | Msa0090970:three_prime_UTR |
| GTTGCAATCAACCTCAATAA+TGG | 0.352010 | 1_2:+73103811 | Msa0090970:CDS |
| AGTGTTCCGGCCTCCAAAAT+TGG | 0.356548 | 1_2:+73103005 | Msa0090970:CDS |
| ATTAATAATGTAAACTGCTT+AGG | 0.358005 | 1_2:+73104216 | Msa0090970:exon |
| CCCAGTTCTTGATAGTGTTC+CGG | 0.360623 | 1_2:+73102992 | Msa0090970:CDS |
| ATGTCATCAAAACAGGTTAC+TGG | 0.372121 | 1_2:-73103515 | None:intergenic |
| TTTGGATAGCAGATCATTGC+TGG | 0.373557 | 1_2:+73104180 | Msa0090970:CDS |
| AGCCAACAATTCCTTAACTT+TGG | 0.375480 | 1_2:-73103846 | None:intergenic |
| ATGGTAAGGATTAGATGCTT+TGG | 0.384466 | 1_2:-73102224 | None:intergenic |
| TGCTTCAATTAATTTCCATA+TGG | 0.386029 | 1_2:+73100541 | None:intergenic |
| CTGTTTCATTTGGAAATTTG+TGG | 0.403170 | 1_2:+73100792 | Msa0090970:five_prime_UTR |
| TTTGACAAGTATGGTGATAT+AGG | 0.403553 | 1_2:+73103716 | Msa0090970:CDS |
| TTGAGGTTGATTGCAACTCT+TGG | 0.403873 | 1_2:-73103805 | None:intergenic |
| TGTTGAGATAGATGTGTGTT+TGG | 0.406531 | 1_2:-73100760 | None:intergenic |
| TTCTCCAATGTCATCAAAAC+AGG | 0.411746 | 1_2:-73103522 | None:intergenic |
| TGGTAAGGATTAGATGCTTT+GGG | 0.412334 | 1_2:-73102223 | None:intergenic |
| GGTTTCCGAGACGCGTGTTC+CGG | 0.412451 | 1_2:+73103643 | Msa0090970:CDS |
| GTCCAAAGTTAAGGAATTGT+TGG | 0.414758 | 1_2:+73103844 | Msa0090970:CDS |
| ACACAGTTTGGCATAACTCT+TGG | 0.416359 | 1_2:-73101477 | None:intergenic |
| GGTTGGACTTTGTCATTGAC+AGG | 0.416998 | 1_2:-73103413 | None:intergenic |
| CCTTCGCTGCCTCCACGGAC+TGG | 0.417167 | 1_2:-73103964 | None:intergenic |
| CATCTGATTTGGAGAAGAAC+AGG | 0.418056 | 1_2:+73104131 | Msa0090970:CDS |
| CTTTGTTAATTCCATTATTG+AGG | 0.418558 | 1_2:-73103822 | None:intergenic |
| TACTTTATGTTTGGATGCTG+AGG | 0.418763 | 1_2:+73104627 | Msa0090970:three_prime_UTR |
| CTATCAAGAACTGGGAGTTC+AGG | 0.419986 | 1_2:-73102984 | None:intergenic |
| GCCGGAACACTATCAAGAAC+TGG | 0.422891 | 1_2:-73102993 | None:intergenic |
| ATTAACAAAGTCCAAAGTTA+AGG | 0.424679 | 1_2:+73103835 | Msa0090970:CDS |
| AGATTCTCAGAACCATCCTT+TGG | 0.426249 | 1_2:-73103434 | None:intergenic |
| ATAATACACCTTAAACGTCT+TGG | 0.433733 | 1_2:+73104351 | Msa0090970:three_prime_UTR |
| TTAGAAGCATATACACAGTT+TGG | 0.434446 | 1_2:-73101489 | None:intergenic |
| GATGGTTCTGAGAATCTTGC+CGG | 0.438726 | 1_2:+73103440 | Msa0090970:CDS |
| AATTGATTTCCTTGATCTTG+TGG | 0.441816 | 1_2:-73101542 | None:intergenic |
| CTTGTATGCGGAAAATAACT+TGG | 0.442279 | 1_2:-73104495 | None:intergenic |
| TGCCGCATCAGCGAGATAAA+TGG | 0.445859 | 1_2:-73103030 | None:intergenic |
| AATTGCCAGAAAAGAATGTC+TGG | 0.451422 | 1_2:+73102259 | Msa0090970:CDS |
| GGCTGACTCTGATAGTGAAA+TGG | 0.452176 | 1_2:+73103985 | Msa0090970:CDS |
| TCATTCCATTATCCTTTGAC+AGG | 0.453813 | 1_2:+73102940 | Msa0090970:CDS |
| TCAATTAATTTCCATATGGA+TGG | 0.455991 | 1_2:+73100545 | Msa0090970:five_prime_UTR |
| ATTATAGTCATCCATCCATA+TGG | 0.457030 | 1_2:-73100556 | None:intergenic |
| TTCACATGGTATCTTCCAAC+CGG | 0.459840 | 1_2:-73103662 | None:intergenic |
| TATAGGAGAAAGCTGCCATT+TGG | 0.459842 | 1_2:+73103733 | Msa0090970:CDS |
| TGGATGTAACAGTTACCCTT+AGG | 0.467251 | 1_2:+73101397 | Msa0090970:intron |
| ACTTGTCAAAGATAGATTGC+AGG | 0.471370 | 1_2:-73103703 | None:intergenic |
| GCTATCCAAATTATCAACCT+TGG | 0.473319 | 1_2:-73104167 | None:intergenic |
| CATCACTGTCCTCATTATCA+TGG | 0.477505 | 1_2:-73103598 | None:intergenic |
| AGAAAGCTGCCATTTGGAAT+CGG | 0.478703 | 1_2:+73103739 | Msa0090970:CDS |
| GAGGACAGTGATGATGAAGA+GGG | 0.480600 | 1_2:+73103608 | Msa0090970:CDS |
| AATGTAAACTGCTTAGGTAA+TGG | 0.481977 | 1_2:+73104222 | Msa0090970:three_prime_UTR |
| CTTAGGTTGGTTTGTAGCAA+AGG | 0.483917 | 1_2:+73101414 | Msa0090970:five_prime_UTR |
| ATCAGAATAACAAAAGTGCT+TGG | 0.488484 | 1_2:-73103570 | None:intergenic |
| AACCATCAAACAAAGCCATA+TGG | 0.489608 | 1_2:+73100645 | Msa0090970:five_prime_UTR |
| TCTCAGAACCATCCTTTGGT+TGG | 0.489848 | 1_2:-73103430 | None:intergenic |
| GTCAGCCTTCGCTGCCTCCA+CGG | 0.492054 | 1_2:-73103969 | None:intergenic |
| ACCTTAAACGTCTTGGAACC+AGG | 0.497652 | 1_2:+73104358 | Msa0090970:three_prime_UTR |
| CCAGTCCGTGGAGGCAGCGA+AGG | 0.500128 | 1_2:+73103964 | Msa0090970:CDS |
| AATGAGATAGTACCAGCTTC+TGG | 0.501090 | 1_2:+73103101 | Msa0090970:CDS |
| TCGTCTTTGACTTCCTTCCT+AGG | 0.513305 | 1_2:+73100839 | Msa0090970:five_prime_UTR |
| AAGCTGCTCCAAAATTGGCC+TGG | 0.517308 | 1_2:-73104376 | None:intergenic |
| GGTGTTATAGAAAGTGAGAT+AGG | 0.519458 | 1_2:+73102160 | Msa0090970:CDS |
| CTGCTCAACTTCGCGTGACG+TGG | 0.519956 | 1_2:+73103888 | Msa0090970:CDS |
| CTTTGCTACAAACCAACCTA+AGG | 0.520047 | 1_2:-73101413 | None:intergenic |
| TGAATGAATGAGAATTAAGA+AGG | 0.520621 | 1_2:-73100684 | None:intergenic |
| GTTTGTAGCAAAGGTGAGGA+AGG | 0.521953 | 1_2:+73101423 | Msa0090970:five_prime_UTR |
| TTGTACTGCAATTGATGCAT+TGG | 0.522973 | 1_2:-73104451 | None:intergenic |
| TCCAACCGGAACACGCGTCT+CGG | 0.523274 | 1_2:-73103648 | None:intergenic |
| TTTACATCACACGCATGGTA+AGG | 0.525868 | 1_2:-73102238 | None:intergenic |
| GCATCACAACCGATTCCAAA+TGG | 0.527475 | 1_2:-73103748 | None:intergenic |
| CAACTGAATCAATAAAGTCA+TGG | 0.529124 | 1_2:+73104287 | Msa0090970:three_prime_UTR |
| ATATGGAAATTAATTGAAGC+AGG | 0.533008 | 1_2:-73100539 | None:intergenic |
| GAAGGTCTAACTACATCAGC+TGG | 0.534751 | 1_2:+73103542 | Msa0090970:CDS |
| TTTATGTTTGGATGCTGAGG+GGG | 0.535399 | 1_2:+73104630 | Msa0090970:three_prime_UTR |
| TCAAAGATAGATTGCAGGAT+GGG | 0.535446 | 1_2:-73103698 | None:intergenic |
| TGAGGACAGTGATGATGAAG+AGG | 0.538033 | 1_2:+73103607 | Msa0090970:CDS |
| ACATACTGTTTAATCTCTTG+GGG | 0.538286 | 1_2:+73104518 | Msa0090970:three_prime_UTR |
| CATGTATGATGTACCTAGGA+AGG | 0.540441 | 1_2:-73100852 | None:intergenic |
| TGTAACAGTTACCCTTAGGT+TGG | 0.543413 | 1_2:+73101401 | Msa0090970:intron |
| AACTGAATCAATAAAGTCAT+GGG | 0.545840 | 1_2:+73104288 | Msa0090970:three_prime_UTR |
| ACTTTATGTTTGGATGCTGA+GGG | 0.547355 | 1_2:+73104628 | Msa0090970:three_prime_UTR |
| AAATTGCATCCACAAGATCA+AGG | 0.554464 | 1_2:+73101533 | Msa0090970:CDS |
| AGGTAATGGTATTAGTATTG+TGG | 0.555687 | 1_2:+73104236 | Msa0090970:three_prime_UTR |
| TCCGAGACGCGTGTTCCGGT+TGG | 0.556986 | 1_2:+73103647 | Msa0090970:CDS |
| TTGATTTGTCTGTATCTGGC+CGG | 0.560826 | 1_2:-73103459 | None:intergenic |
| CGCCATTTATCTCGCTGATG+CGG | 0.565804 | 1_2:+73103028 | Msa0090970:CDS |
| GTATGTAGTTCACCAGAAGC+TGG | 0.576929 | 1_2:-73103113 | None:intergenic |
| AGGTGAGACTTGCATAGAGA+TGG | 0.581960 | 1_2:+73101443 | Msa0090970:exon |
| GTTGGTTTGTAGCAAAGGTG+AGG | 0.590459 | 1_2:+73101419 | Msa0090970:five_prime_UTR |
| CAGGCTATCTATCAAATCCA+AGG | 0.590819 | 1_2:+73104150 | Msa0090970:CDS |
| GACAAAGTCCAACCAAAGGA+TGG | 0.593512 | 1_2:+73103422 | Msa0090970:CDS |
| TGATGTGCTCCATGATAATG+AGG | 0.599216 | 1_2:+73103589 | Msa0090970:CDS |
| CCGGAACACTATCAAGAACT+GGG | 0.602030 | 1_2:-73102992 | None:intergenic |
| CTTTATGTTTGGATGCTGAG+GGG | 0.602280 | 1_2:+73104629 | Msa0090970:three_prime_UTR |
| CAGATACAGACAAATCAAGC+AGG | 0.602638 | 1_2:+73103464 | Msa0090970:CDS |
| GTCAAAGATAGATTGCAGGA+TGG | 0.607166 | 1_2:-73103699 | None:intergenic |
| AGTCAAAGACGATGGTGATG+AGG | 0.608775 | 1_2:-73100828 | None:intergenic |
| GGCAATTTACATCACACGCA+TGG | 0.610083 | 1_2:-73102243 | None:intergenic |
| GAGCAAAGCTTTCCTTCACA+TGG | 0.615016 | 1_2:-73103676 | None:intergenic |
| CATTGATGAGCACCAGTCCG+TGG | 0.628033 | 1_2:+73103952 | Msa0090970:CDS |
| CATACTGTTTAATCTCTTGG+GGG | 0.629501 | 1_2:+73104519 | Msa0090970:three_prime_UTR |
| ACTACATACTCTAGATGTCA+AGG | 0.630737 | 1_2:+73103127 | Msa0090970:CDS |
| ATGGTGATGAGGAAGTTAGT+AGG | 0.636592 | 1_2:-73100817 | None:intergenic |
| AGTACAATAGAGACTAGAGT+TGG | 0.641551 | 1_2:+73104467 | Msa0090970:three_prime_UTR |
| ATTTGGAATCGGTTGTGATG+CGG | 0.643613 | 1_2:+73103750 | Msa0090970:CDS |
| GGTCTAACTACATCAGCTGG+TGG | 0.651697 | 1_2:+73103545 | Msa0090970:CDS |
| TTTGCTACAAACCAACCTAA+GGG | 0.653462 | 1_2:-73101412 | None:intergenic |
| TTTGACTCAGAAAGAACGGG+AGG | 0.654627 | 1_2:+73104045 | Msa0090970:CDS |
| CAATGACAAAGTCCAACCAA+AGG | 0.663967 | 1_2:+73103418 | Msa0090970:CDS |
| TAAACAGTATGTCTTGTATG+CGG | 0.667935 | 1_2:-73104507 | None:intergenic |
| TGAAGAGGGAAGTGAGTCTG+TGG | 0.676872 | 1_2:+73103622 | Msa0090970:CDS |
| GGTTGGAAGATACCATGTGA+AGG | 0.677016 | 1_2:+73103664 | Msa0090970:CDS |
| TGATGAGCACCAGTCCGTGG+AGG | 0.694249 | 1_2:+73103955 | Msa0090970:CDS |
| AGGAAGGAAGTCAAAGACGA+TGG | 0.694831 | 1_2:-73100836 | None:intergenic |
| ATAGTGAAATGGAATCACTG+AGG | 0.783003 | 1_2:+73103996 | Msa0090970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTATTTTTTATCCAAA+CGG | + | chr1_2:73101763-73101782 | Msa0090970:intron | 10.0% |
| !! | ATATTAAAACAAAAATTGAA+GGG | + | chr1_2:73104074-73104093 | Msa0090970:CDS | 10.0% |
| !! | TTATTTATTTACTTTATGTT+TGG | + | chr1_2:73104618-73104637 | Msa0090970:three_prime_UTR | 10.0% |
| !! | AAAAAATAAGTATGTTCAAT+TGG | + | chr1_2:73100597-73100616 | Msa0090970:five_prime_UTR | 15.0% |
| !!! | ATAATTTTTTTATGAGTTGA+TGG | + | chr1_2:73101102-73101121 | Msa0090970:intron | 15.0% |
| !!! | GTTTAATTTGTTTATTTGAT+TGG | + | chr1_2:73101377-73101396 | Msa0090970:intron | 15.0% |
| !!! | TTATTATTTTTTATCCAAAC+GGG | + | chr1_2:73101764-73101783 | Msa0090970:intron | 15.0% |
| !!! | TATAGAAGTGAATTTTTTTT+AGG | - | chr1_2:73101919-73101938 | None:intergenic | 15.0% |
| !!! | AATTTGATTTAAACATGTTT+GGG | - | chr1_2:73102755-73102774 | None:intergenic | 15.0% |
| !!! | TTTAATTTCAAATAAAGTTG+AGG | - | chr1_2:73102783-73102802 | None:intergenic | 15.0% |
| !!! | TTGTCATAATATTTTGATAT+TGG | - | chr1_2:73103059-73103078 | None:intergenic | 15.0% |
| !! | AATGATATATTTAACATAGA+TGG | + | chr1_2:73103298-73103317 | Msa0090970:intron | 15.0% |
| !! | GATATTAAAACAAAAATTGA+AGG | + | chr1_2:73104073-73104092 | Msa0090970:CDS | 15.0% |
| !!! | CAAACATTAATTTTATGACA+TGG | + | chr1_2:73101003-73101022 | Msa0090970:intron | 20.0% |
| !!! | TATTTTGTCTTTTTCAGATT+TGG | + | chr1_2:73101286-73101305 | Msa0090970:intron | 20.0% |
| !!! | ATTTTGTCTTTTTCAGATTT+GGG | + | chr1_2:73101287-73101306 | Msa0090970:intron | 20.0% |
| !!! | ATACTCTTTTTTATATACGA+TGG | + | chr1_2:73101620-73101639 | Msa0090970:intron | 20.0% |
| !! | TTGAGTTTATCTATTGATAT+AGG | + | chr1_2:73101662-73101681 | Msa0090970:intron | 20.0% |
| !!! | TTTTTTTTAGGCATAAAAAC+AGG | - | chr1_2:73101907-73101926 | None:intergenic | 20.0% |
| !! | AATTGCAGATAAAAAATGAA+GGG | - | chr1_2:73102300-73102319 | None:intergenic | 20.0% |
| !! | AAATTGCAGATAAAAAATGA+AGG | - | chr1_2:73102301-73102320 | None:intergenic | 20.0% |
| !!! | CATTTTTTATCTGCAATTTA+TGG | + | chr1_2:73102302-73102321 | Msa0090970:intron | 20.0% |
| !! | AGTTAACATGACATATAAAT+TGG | - | chr1_2:73102398-73102417 | None:intergenic | 20.0% |
| !! | TAAACAAAATCATAATGTCA+CGG | - | chr1_2:73102562-73102581 | None:intergenic | 20.0% |
| !! | TTTGTCAACTTACAAATATT+TGG | + | chr1_2:73102660-73102679 | Msa0090970:intron | 20.0% |
| !!! | GAATTTGATTTAAACATGTT+TGG | - | chr1_2:73102756-73102775 | None:intergenic | 20.0% |
| !! | TTATAAGTTTACAGTGATTA+AGG | - | chr1_2:73102825-73102844 | None:intergenic | 20.0% |
| !! | TAATCACTGTAAACTTATAA+AGG | + | chr1_2:73102825-73102844 | Msa0090970:intron | 20.0% |
| !! | ATATTATGACAAGAAAAAGT+TGG | + | chr1_2:73103067-73103086 | Msa0090970:CDS | 20.0% |
| !! | ATTAATAATGTAAACTGCTT+AGG | + | chr1_2:73104216-73104235 | Msa0090970:exon | 20.0% |
| !!! | CTATGCTATATTTTAAAGAT+AGG | + | chr1_2:73104313-73104332 | Msa0090970:three_prime_UTR | 20.0% |
| !!! | ACCAAAAAGTACTAAATTTA+GGG | - | chr1_2:73104555-73104574 | None:intergenic | 20.0% |
| !!! | AACCAAAAAGTACTAAATTT+AGG | - | chr1_2:73104556-73104575 | None:intergenic | 20.0% |
| !! | AGTTTATATTATGACATTTC+AGG | + | chr1_2:73104584-73104603 | Msa0090970:three_prime_UTR | 20.0% |
| ! | TCAATTAATTTCCATATGGA+TGG | + | chr1_2:73100545-73100564 | Msa0090970:five_prime_UTR | 25.0% |
| ! | TGAATGAATGAGAATTAAGA+AGG | - | chr1_2:73100687-73100706 | None:intergenic | 25.0% |
| ! | GAAGAATGAAAGATAGAAAA+AGG | - | chr1_2:73100887-73100906 | None:intergenic | 25.0% |
| ! | CTATACATACACAAGAAAAA+GGG | - | chr1_2:73101330-73101349 | None:intergenic | 25.0% |
| ! | ACTATACATACACAAGAAAA+AGG | - | chr1_2:73101331-73101350 | None:intergenic | 25.0% |
| ! | AAGCCACCTAAAAATAAAAA+GGG | + | chr1_2:73101567-73101586 | Msa0090970:CDS | 25.0% |
| !! | AAAAAGAGTATATAGCAAAC+AGG | - | chr1_2:73101611-73101630 | None:intergenic | 25.0% |
| ! | TGATAAACGCTTATACTATA+AGG | + | chr1_2:73101735-73101754 | Msa0090970:intron | 25.0% |
| ! | GATAAACGCTTATACTATAA+GGG | + | chr1_2:73101736-73101755 | Msa0090970:intron | 25.0% |
| ! | ACTAAAATATATTACCCGTT+TGG | - | chr1_2:73101781-73101800 | None:intergenic | 25.0% |
| ! | TTCAGTTACAAATGAGTATT+TGG | + | chr1_2:73101871-73101890 | Msa0090970:intron | 25.0% |
| ! | TATAGTTGTATCAATTGCAA+CGG | + | chr1_2:73101935-73101954 | Msa0090970:intron | 25.0% |
| !!! | TTGACTTGTGATATATCTAT+AGG | + | chr1_2:73102021-73102040 | Msa0090970:intron | 25.0% |
| ! | AGAGCTTATAATTTATCCTT+TGG | + | chr1_2:73102054-73102073 | Msa0090970:intron | 25.0% |
| !!! | AGGTTTTTTTTGTTGAAGTT+AGG | + | chr1_2:73102845-73102864 | Msa0090970:intron | 25.0% |
| ! | ATCAAATATTCATCTCAAAG+AGG | + | chr1_2:73102869-73102888 | Msa0090970:intron | 25.0% |
| ! | CTACAATCTTCTTAAATTGT+AGG | + | chr1_2:73102915-73102934 | Msa0090970:intron | 25.0% |
| !! | TCTAATAGAAATTTCTGAAG+AGG | - | chr1_2:73103179-73103198 | None:intergenic | 25.0% |
| ! | TTAACAATATGCTATTGAGA+AGG | - | chr1_2:73103364-73103383 | None:intergenic | 25.0% |
| ! | CTTTGTTAATTCCATTATTG+AGG | - | chr1_2:73103825-73103844 | None:intergenic | 25.0% |
| ! | ATTAACAAAGTCCAAAGTTA+AGG | + | chr1_2:73103835-73103854 | Msa0090970:CDS | 25.0% |
| ! | GAAAGAACTAGAATCAAAAA+TGG | + | chr1_2:73104018-73104037 | Msa0090970:CDS | 25.0% |
| !!! | AAATTTTGACTCAGAAAGAA+CGG | + | chr1_2:73104041-73104060 | Msa0090970:CDS | 25.0% |
| ! | AACTGAATCAATAAAGTCAT+GGG | + | chr1_2:73104288-73104307 | Msa0090970:three_prime_UTR | 25.0% |
| !!! | TAATAGTTAATGCTTTTTGC+TGG | - | chr1_2:73104419-73104438 | None:intergenic | 25.0% |
| !!! | GCAAAAAGCATTAACTATTA+AGG | + | chr1_2:73104419-73104438 | Msa0090970:three_prime_UTR | 25.0% |
| !!! | CCAAAAAGTACTAAATTTAG+GGG | - | chr1_2:73104554-73104573 | None:intergenic | 25.0% |
| ATTATAGTCATCCATCCATA+TGG | - | chr1_2:73100559-73100578 | None:intergenic | 30.0% | |
| AAACCTGTTACTGTTTCATT+TGG | + | chr1_2:73100782-73100801 | Msa0090970:five_prime_UTR | 30.0% | |
| TTTCCAAATGAAACAGTAAC+AGG | - | chr1_2:73100788-73100807 | None:intergenic | 30.0% | |
| CTGTTTCATTTGGAAATTTG+TGG | + | chr1_2:73100792-73100811 | Msa0090970:five_prime_UTR | 30.0% | |
| TGTTTCTTCTTTCTGTTTCA+TGG | + | chr1_2:73100919-73100938 | Msa0090970:intron | 30.0% | |
| GTTTCTTCTTTCTGTTTCAT+GGG | + | chr1_2:73100920-73100939 | Msa0090970:intron | 30.0% | |
| !!! | TTTTTTGTATCACCTTTTGC+TGG | + | chr1_2:73101249-73101268 | Msa0090970:intron | 30.0% |
| ! | TTTTTGTATCACCTTTTGCT+GGG | + | chr1_2:73101250-73101269 | Msa0090970:intron | 30.0% |
| ! | TTAGAAGCATATACACAGTT+TGG | - | chr1_2:73101492-73101511 | None:intergenic | 30.0% |
| ! | AATTGATTTCCTTGATCTTG+TGG | - | chr1_2:73101545-73101564 | None:intergenic | 30.0% |
| !!! | CTTTTTATTTTTAGGTGGCT+TGG | - | chr1_2:73101568-73101587 | None:intergenic | 30.0% |
| CAAGCCACCTAAAAATAAAA+AGG | + | chr1_2:73101566-73101585 | Msa0090970:CDS | 30.0% | |
| !!! | GATCCCTTTTTATTTTTAGG+TGG | - | chr1_2:73101573-73101592 | None:intergenic | 30.0% |
| !!! | CCAGATCCCTTTTTATTTTT+AGG | - | chr1_2:73101576-73101595 | None:intergenic | 30.0% |
| CCTAAAAATAAAAAGGGATC+TGG | + | chr1_2:73101573-73101592 | Msa0090970:CDS | 30.0% | |
| TCAAATAAGCCAATTCAAAG+AGG | - | chr1_2:73101646-73101665 | None:intergenic | 30.0% | |
| AGGCAATTATTTCATCAGTT+AGG | - | chr1_2:73102080-73102099 | None:intergenic | 30.0% | |
| !! | CGAAAAGCTTTGGAAAAAAA+AGG | - | chr1_2:73102136-73102155 | None:intergenic | 30.0% |
| !! | AACTTTGTCTTCTAAGATGA+AGG | + | chr1_2:73102414-73102433 | Msa0090970:intron | 30.0% |
| !! | ACTTTGTCTTCTAAGATGAA+GGG | + | chr1_2:73102415-73102434 | Msa0090970:intron | 30.0% |
| AGTCTAGAAACAGATTGATT+TGG | + | chr1_2:73102462-73102481 | Msa0090970:intron | 30.0% | |
| AAAAGGAAAGTCAGTTGATT+TGG | + | chr1_2:73102698-73102717 | Msa0090970:intron | 30.0% | |
| TTTCAAATAAAGTTGAGGTG+TGG | - | chr1_2:73102778-73102797 | None:intergenic | 30.0% | |
| ATTAAGGAGAAGTTAGATCA+GGG | - | chr1_2:73102809-73102828 | None:intergenic | 30.0% | |
| ! | TTTTTCCTGTCAAAGGATAA+TGG | - | chr1_2:73102948-73102967 | None:intergenic | 30.0% |
| TGTTCTATAACAGTGTTAGT+TGG | + | chr1_2:73103227-73103246 | Msa0090970:intron | 30.0% | |
| GTTCTATAACAGTGTTAGTT+GGG | + | chr1_2:73103228-73103247 | Msa0090970:intron | 30.0% | |
| ATGTGAAAACGAAGATAACA+AGG | - | chr1_2:73103261-73103280 | None:intergenic | 30.0% | |
| ! | TTGTTATCTTCGTTTTCACA+TGG | + | chr1_2:73103260-73103279 | Msa0090970:intron | 30.0% |
| !! | ATCAGAATAACAAAAGTGCT+TGG | - | chr1_2:73103573-73103592 | None:intergenic | 30.0% |
| CAATCTATCTTTGACAAGTA+TGG | + | chr1_2:73103707-73103726 | Msa0090970:CDS | 30.0% | |
| TTTGACAAGTATGGTGATAT+AGG | + | chr1_2:73103716-73103735 | Msa0090970:CDS | 30.0% | |
| !!! | AATTTTGACTCAGAAAGAAC+GGG | + | chr1_2:73104042-73104061 | Msa0090970:CDS | 30.0% |
| !! | CAAATCCAAGGTTGATAATT+TGG | + | chr1_2:73104162-73104181 | Msa0090970:CDS | 30.0% |
| AATGTAAACTGCTTAGGTAA+TGG | + | chr1_2:73104222-73104241 | Msa0090970:three_prime_UTR | 30.0% | |
| ! | AGGTAATGGTATTAGTATTG+TGG | + | chr1_2:73104236-73104255 | Msa0090970:three_prime_UTR | 30.0% |
| CAACTGAATCAATAAAGTCA+TGG | + | chr1_2:73104287-73104306 | Msa0090970:three_prime_UTR | 30.0% | |
| ATAATACACCTTAAACGTCT+TGG | + | chr1_2:73104351-73104370 | Msa0090970:three_prime_UTR | 30.0% | |
| TAAACAGTATGTCTTGTATG+CGG | - | chr1_2:73104510-73104529 | None:intergenic | 30.0% | |
| AGACATACTGTTTAATCTCT+TGG | + | chr1_2:73104516-73104535 | Msa0090970:three_prime_UTR | 30.0% | |
| GACATACTGTTTAATCTCTT+GGG | + | chr1_2:73104517-73104536 | Msa0090970:three_prime_UTR | 30.0% | |
| ACATACTGTTTAATCTCTTG+GGG | + | chr1_2:73104518-73104537 | Msa0090970:three_prime_UTR | 30.0% | |
| ! | CCCCTAAATTTAGTACTTTT+TGG | + | chr1_2:73104551-73104570 | Msa0090970:three_prime_UTR | 30.0% |
| !! | ATGGCTTTGTTTGATGGTTA+TGG | - | chr1_2:73100644-73100663 | None:intergenic | 35.0% |
| AACCATCAAACAAAGCCATA+TGG | + | chr1_2:73100645-73100664 | Msa0090970:five_prime_UTR | 35.0% | |
| !!! | AGCGTTTGTTTTTGACCATA+TGG | - | chr1_2:73100663-73100682 | None:intergenic | 35.0% |
| TGTTGAGATAGATGTGTGTT+TGG | - | chr1_2:73100763-73100782 | None:intergenic | 35.0% | |
| AAAGCATGTATGATGTACCT+AGG | - | chr1_2:73100859-73100878 | None:intergenic | 35.0% | |
| ! | CTTTTTGTAAACCCAGCAAA+AGG | - | chr1_2:73101264-73101283 | None:intergenic | 35.0% |
| !!! | TTGTCTTTTTCAGATTTGGG+TGG | + | chr1_2:73101290-73101309 | Msa0090970:intron | 35.0% |
| TTTGCTACAAACCAACCTAA+GGG | - | chr1_2:73101415-73101434 | None:intergenic | 35.0% | |
| !! | TTTTGAGTGCATTCATGGTA+GGG | - | chr1_2:73101516-73101535 | None:intergenic | 35.0% |
| !! | ATTTTGAGTGCATTCATGGT+AGG | - | chr1_2:73101517-73101536 | None:intergenic | 35.0% |
| !! | TGCAATTTTGAGTGCATTCA+TGG | - | chr1_2:73101521-73101540 | None:intergenic | 35.0% |
| AAATTGCATCCACAAGATCA+AGG | + | chr1_2:73101533-73101552 | Msa0090970:CDS | 35.0% | |
| GAAAAGAGACACAAACAGAA+CGG | - | chr1_2:73101978-73101997 | None:intergenic | 35.0% | |
| ! | AGTCAAAACAGAAGCATACA+TGG | - | chr1_2:73102007-73102026 | None:intergenic | 35.0% |
| TATTTCATCAGTTAGGCCAA+AGG | - | chr1_2:73102073-73102092 | None:intergenic | 35.0% | |
| GTGTTGAGTGATTTATAGCT+AGG | - | chr1_2:73102100-73102119 | None:intergenic | 35.0% | |
| ! | TTTTCCAAAGCTTTTCGCAA+AGG | + | chr1_2:73102139-73102158 | Msa0090970:intron | 35.0% |
| ! | GGTGTTATAGAAAGTGAGAT+AGG | + | chr1_2:73102160-73102179 | Msa0090970:CDS | 35.0% |
| TGGTAAGGATTAGATGCTTT+GGG | - | chr1_2:73102226-73102245 | None:intergenic | 35.0% | |
| ATGGTAAGGATTAGATGCTT+TGG | - | chr1_2:73102227-73102246 | None:intergenic | 35.0% | |
| AATTGCCAGAAAAGAATGTC+TGG | + | chr1_2:73102259-73102278 | Msa0090970:CDS | 35.0% | |
| !! | CTTTGTCTTCTAAGATGAAG+GGG | + | chr1_2:73102416-73102435 | Msa0090970:intron | 35.0% |
| TGGAGACTGAAAATAAACTG+TGG | + | chr1_2:73102482-73102501 | Msa0090970:intron | 35.0% | |
| AAGTTGACAAACTCATTCAC+TGG | - | chr1_2:73102651-73102670 | None:intergenic | 35.0% | |
| !! | CTTTCCTTTTCTAAGAGCTA+TGG | - | chr1_2:73102688-73102707 | None:intergenic | 35.0% |
| GATTAAGGAGAAGTTAGATC+AGG | - | chr1_2:73102810-73102829 | None:intergenic | 35.0% | |
| TCATTCCATTATCCTTTGAC+AGG | + | chr1_2:73102940-73102959 | Msa0090970:CDS | 35.0% | |
| ! | TAGCTTCTTTTTCCTGTCAA+AGG | - | chr1_2:73102955-73102974 | None:intergenic | 35.0% |
| TTTGACAGGAAAAAGAAGCT+AGG | + | chr1_2:73102954-73102973 | Msa0090970:CDS | 35.0% | |
| !! | GGTACTATCTCATTGCTTTT+CGG | - | chr1_2:73103095-73103114 | None:intergenic | 35.0% |
| ACTACATACTCTAGATGTCA+AGG | + | chr1_2:73103127-73103146 | Msa0090970:CDS | 35.0% | |
| ATGTCATCAAAACAGGTTAC+TGG | - | chr1_2:73103518-73103537 | None:intergenic | 35.0% | |
| !!! | GTAACCTGTTTTGATGACAT+TGG | + | chr1_2:73103518-73103537 | Msa0090970:CDS | 35.0% |
| TTCTCCAATGTCATCAAAAC+AGG | - | chr1_2:73103525-73103544 | None:intergenic | 35.0% | |
| !!! | TGTTTTGATGACATTGGAGA+AGG | + | chr1_2:73103524-73103543 | Msa0090970:CDS | 35.0% |
| TCAAAGATAGATTGCAGGAT+GGG | - | chr1_2:73103701-73103720 | None:intergenic | 35.0% | |
| ACTTGTCAAAGATAGATTGC+AGG | - | chr1_2:73103706-73103725 | None:intergenic | 35.0% | |
| GTTGCAATCAACCTCAATAA+TGG | + | chr1_2:73103811-73103830 | Msa0090970:CDS | 35.0% | |
| GTCCAAAGTTAAGGAATTGT+TGG | + | chr1_2:73103844-73103863 | Msa0090970:CDS | 35.0% | |
| AGCCAACAATTCCTTAACTT+TGG | - | chr1_2:73103849-73103868 | None:intergenic | 35.0% | |
| ATAGTGAAATGGAATCACTG+AGG | + | chr1_2:73103996-73104015 | Msa0090970:CDS | 35.0% | |
| TGAGATGAAGTCATCTGATT+TGG | + | chr1_2:73104120-73104139 | Msa0090970:CDS | 35.0% | |
| GCTATCCAAATTATCAACCT+TGG | - | chr1_2:73104170-73104189 | None:intergenic | 35.0% | |
| !! | AGTTAATGCTTTTTGCTGGT+TGG | - | chr1_2:73104415-73104434 | None:intergenic | 35.0% |
| TTGTACTGCAATTGATGCAT+TGG | - | chr1_2:73104454-73104473 | None:intergenic | 35.0% | |
| AGTACAATAGAGACTAGAGT+TGG | + | chr1_2:73104467-73104486 | Msa0090970:three_prime_UTR | 35.0% | |
| CTTGTATGCGGAAAATAACT+TGG | - | chr1_2:73104498-73104517 | None:intergenic | 35.0% | |
| CATACTGTTTAATCTCTTGG+GGG | + | chr1_2:73104519-73104538 | Msa0090970:three_prime_UTR | 35.0% | |
| TACTTTATGTTTGGATGCTG+AGG | + | chr1_2:73104627-73104646 | Msa0090970:three_prime_UTR | 35.0% | |
| ACTTTATGTTTGGATGCTGA+GGG | + | chr1_2:73104628-73104647 | Msa0090970:three_prime_UTR | 35.0% | |
| !! | GACCATATGGCTTTGTTTGA+TGG | - | chr1_2:73100650-73100669 | None:intergenic | 40.0% |
| ! | ATGGTGATGAGGAAGTTAGT+AGG | - | chr1_2:73100820-73100839 | None:intergenic | 40.0% |
| CATGTATGATGTACCTAGGA+AGG | - | chr1_2:73100855-73100874 | None:intergenic | 40.0% | |
| !! | TATGAGTTGATGGAGTCCAA+TGG | + | chr1_2:73101112-73101131 | Msa0090970:intron | 40.0% |
| TGGATGTAACAGTTACCCTT+AGG | + | chr1_2:73101397-73101416 | Msa0090970:intron | 40.0% | |
| TGTAACAGTTACCCTTAGGT+TGG | + | chr1_2:73101401-73101420 | Msa0090970:intron | 40.0% | |
| CTTTGCTACAAACCAACCTA+AGG | - | chr1_2:73101416-73101435 | None:intergenic | 40.0% | |
| !! | CTTAGGTTGGTTTGTAGCAA+AGG | + | chr1_2:73101414-73101433 | Msa0090970:five_prime_UTR | 40.0% |
| ACACAGTTTGGCATAACTCT+TGG | - | chr1_2:73101480-73101499 | None:intergenic | 40.0% | |
| ATACGATGGCCTCTTTGAAT+TGG | + | chr1_2:73101634-73101653 | Msa0090970:intron | 40.0% | |
| AAACACCATTTCTGCGTTGT+TGG | + | chr1_2:73101812-73101831 | Msa0090970:intron | 40.0% | |
| TATGACCAACAACGCAGAAA+TGG | - | chr1_2:73101820-73101839 | None:intergenic | 40.0% | |
| AACACCTTTGCGAAAAGCTT+TGG | - | chr1_2:73102146-73102165 | None:intergenic | 40.0% | |
| GAAGAAAAACACATGCACTC+AGG | + | chr1_2:73102196-73102215 | Msa0090970:CDS | 40.0% | |
| TTTACATCACACGCATGGTA+AGG | - | chr1_2:73102241-73102260 | None:intergenic | 40.0% | |
| CACTGGTATGAACTCATTGA+TGG | - | chr1_2:73102634-73102653 | None:intergenic | 40.0% | |
| ! | TTTGGGAACTCATTGACTAG+AGG | - | chr1_2:73102738-73102757 | None:intergenic | 40.0% |
| ! | ATAAATGGCGCCAATTTTGG+AGG | - | chr1_2:73103018-73103037 | None:intergenic | 40.0% |
| ! | GAGATAAATGGCGCCAATTT+TGG | - | chr1_2:73103021-73103040 | None:intergenic | 40.0% |
| AATGAGATAGTACCAGCTTC+TGG | + | chr1_2:73103101-73103120 | Msa0090970:CDS | 40.0% | |
| AAGAGGATGTGAGAAAAGAG+AGG | - | chr1_2:73103162-73103181 | None:intergenic | 40.0% | |
| TACCAGACAACTAACTAACC+TGG | - | chr1_2:73103332-73103351 | None:intergenic | 40.0% | |
| GTCTCTTGCCATTGTATCTT+TGG | + | chr1_2:73103387-73103406 | Msa0090970:intron | 40.0% | |
| CAATGACAAAGTCCAACCAA+AGG | + | chr1_2:73103418-73103437 | Msa0090970:CDS | 40.0% | |
| AGATTCTCAGAACCATCCTT+TGG | - | chr1_2:73103437-73103456 | None:intergenic | 40.0% | |
| !! | TTGATTTGTCTGTATCTGGC+CGG | - | chr1_2:73103462-73103481 | None:intergenic | 40.0% |
| !! | CTGCTTGATTTGTCTGTATC+TGG | - | chr1_2:73103466-73103485 | None:intergenic | 40.0% |
| CAGATACAGACAAATCAAGC+AGG | + | chr1_2:73103464-73103483 | Msa0090970:CDS | 40.0% | |
| ! | TGATGTGCTCCATGATAATG+AGG | + | chr1_2:73103589-73103608 | Msa0090970:CDS | 40.0% |
| CATCACTGTCCTCATTATCA+TGG | - | chr1_2:73103601-73103620 | None:intergenic | 40.0% | |
| TTCACATGGTATCTTCCAAC+CGG | - | chr1_2:73103665-73103684 | None:intergenic | 40.0% | |
| GTCAAAGATAGATTGCAGGA+TGG | - | chr1_2:73103702-73103721 | None:intergenic | 40.0% | |
| TATAGGAGAAAGCTGCCATT+TGG | + | chr1_2:73103733-73103752 | Msa0090970:CDS | 40.0% | |
| ! | AGAAAGCTGCCATTTGGAAT+CGG | + | chr1_2:73103739-73103758 | Msa0090970:CDS | 40.0% |
| ! | ATTTGGAATCGGTTGTGATG+CGG | + | chr1_2:73103750-73103769 | Msa0090970:CDS | 40.0% |
| ! | TTGAGGTTGATTGCAACTCT+TGG | - | chr1_2:73103808-73103827 | None:intergenic | 40.0% |
| !! | CATCTGATTTGGAGAAGAAC+AGG | + | chr1_2:73104131-73104150 | Msa0090970:CDS | 40.0% |
| CAGGCTATCTATCAAATCCA+AGG | + | chr1_2:73104150-73104169 | Msa0090970:CDS | 40.0% | |
| TTTGGATAGCAGATCATTGC+TGG | + | chr1_2:73104180-73104199 | Msa0090970:CDS | 40.0% | |
| CTTTATGTTTGGATGCTGAG+GGG | + | chr1_2:73104629-73104648 | Msa0090970:three_prime_UTR | 40.0% | |
| TTTATGTTTGGATGCTGAGG+GGG | + | chr1_2:73104630-73104649 | Msa0090970:three_prime_UTR | 40.0% | |
| ! | AGTCAAAGACGATGGTGATG+AGG | - | chr1_2:73100831-73100850 | None:intergenic | 45.0% |
| AGGAAGGAAGTCAAAGACGA+TGG | - | chr1_2:73100839-73100858 | None:intergenic | 45.0% | |
| ! | TCGTCTTTGACTTCCTTCCT+AGG | + | chr1_2:73100839-73100858 | Msa0090970:five_prime_UTR | 45.0% |
| GTCCAATGGTGTGATGATAC+AGG | + | chr1_2:73101126-73101145 | Msa0090970:intron | 45.0% | |
| CACCTGTATCATCACACCAT+TGG | - | chr1_2:73101131-73101150 | None:intergenic | 45.0% | |
| GGTGTGATGATACAGGTGAT+TGG | + | chr1_2:73101133-73101152 | Msa0090970:intron | 45.0% | |
| !! | GTTGGTTTGTAGCAAAGGTG+AGG | + | chr1_2:73101419-73101438 | Msa0090970:five_prime_UTR | 45.0% |
| GTTTGTAGCAAAGGTGAGGA+AGG | + | chr1_2:73101423-73101442 | Msa0090970:five_prime_UTR | 45.0% | |
| AGGTGAGACTTGCATAGAGA+TGG | + | chr1_2:73101443-73101462 | Msa0090970:exon | 45.0% | |
| GGCAATTTACATCACACGCA+TGG | - | chr1_2:73102246-73102265 | None:intergenic | 45.0% | |
| ! | CAGCTCCAGACATTCTTTTC+TGG | - | chr1_2:73102267-73102286 | None:intergenic | 45.0% |
| ! | AGAATGTCTGGAGCTGATTC+AGG | + | chr1_2:73102271-73102290 | Msa0090970:CDS | 45.0% |
| GGAGCCATAGCTCTTAGAAA+AGG | + | chr1_2:73102681-73102700 | Msa0090970:intron | 45.0% | |
| CTATCAAGAACTGGGAGTTC+AGG | - | chr1_2:73102987-73103006 | None:intergenic | 45.0% | |
| CCGGAACACTATCAAGAACT+GGG | - | chr1_2:73102995-73103014 | None:intergenic | 45.0% | |
| !! | CCCAGTTCTTGATAGTGTTC+CGG | + | chr1_2:73102992-73103011 | Msa0090970:CDS | 45.0% |
| GTATGTAGTTCACCAGAAGC+TGG | - | chr1_2:73103116-73103135 | None:intergenic | 45.0% | |
| ! | AGCCAGGTTAGTTAGTTGTC+TGG | + | chr1_2:73103327-73103346 | Msa0090970:intron | 45.0% |
| ACAGGCTGCCAAAGATACAA+TGG | - | chr1_2:73103398-73103417 | None:intergenic | 45.0% | |
| GGTTGGACTTTGTCATTGAC+AGG | - | chr1_2:73103416-73103435 | None:intergenic | 45.0% | |
| GACAAAGTCCAACCAAAGGA+TGG | + | chr1_2:73103422-73103441 | Msa0090970:CDS | 45.0% | |
| TCTCAGAACCATCCTTTGGT+TGG | - | chr1_2:73103433-73103452 | None:intergenic | 45.0% | |
| !! | GATGGTTCTGAGAATCTTGC+CGG | + | chr1_2:73103440-73103459 | Msa0090970:CDS | 45.0% |
| GAAGGTCTAACTACATCAGC+TGG | + | chr1_2:73103542-73103561 | Msa0090970:CDS | 45.0% | |
| ! | TGAGGACAGTGATGATGAAG+AGG | + | chr1_2:73103607-73103626 | Msa0090970:CDS | 45.0% |
| ! | GAGGACAGTGATGATGAAGA+GGG | + | chr1_2:73103608-73103627 | Msa0090970:CDS | 45.0% |
| GGTTGGAAGATACCATGTGA+AGG | + | chr1_2:73103664-73103683 | Msa0090970:CDS | 45.0% | |
| GAGCAAAGCTTTCCTTCACA+TGG | - | chr1_2:73103679-73103698 | None:intergenic | 45.0% | |
| ! | GCATCACAACCGATTCCAAA+TGG | - | chr1_2:73103751-73103770 | None:intergenic | 45.0% |
| ! | GGCTGACTCTGATAGTGAAA+TGG | + | chr1_2:73103985-73104004 | Msa0090970:CDS | 45.0% |
| TTTGACTCAGAAAGAACGGG+AGG | + | chr1_2:73104045-73104064 | Msa0090970:CDS | 45.0% | |
| ACCTTAAACGTCTTGGAACC+AGG | + | chr1_2:73104358-73104377 | Msa0090970:three_prime_UTR | 45.0% | |
| ! | TCTTGGAACCAGGCCAATTT+TGG | + | chr1_2:73104368-73104387 | Msa0090970:three_prime_UTR | 45.0% |
| TCGCAAAGCTGCTCCAAAAT+TGG | - | chr1_2:73104384-73104403 | None:intergenic | 45.0% | |
| GCCGGAACACTATCAAGAAC+TGG | - | chr1_2:73102996-73103015 | None:intergenic | 50.0% | |
| AGTGTTCCGGCCTCCAAAAT+TGG | + | chr1_2:73103005-73103024 | Msa0090970:CDS | 50.0% | |
| CGCCATTTATCTCGCTGATG+CGG | + | chr1_2:73103028-73103047 | Msa0090970:CDS | 50.0% | |
| TGCCGCATCAGCGAGATAAA+TGG | - | chr1_2:73103033-73103052 | None:intergenic | 50.0% | |
| ! | ACATAGATGGTGTCAGAGCC+AGG | + | chr1_2:73103311-73103330 | Msa0090970:intron | 50.0% |
| GGTCTAACTACATCAGCTGG+TGG | + | chr1_2:73103545-73103564 | Msa0090970:CDS | 50.0% | |
| TGAAGAGGGAAGTGAGTCTG+TGG | + | chr1_2:73103622-73103641 | Msa0090970:CDS | 50.0% | |
| GCCTGGTTCCAAGACGTTTA+AGG | - | chr1_2:73104362-73104381 | None:intergenic | 50.0% | |
| AAGCTGCTCCAAAATTGGCC+TGG | - | chr1_2:73104379-73104398 | None:intergenic | 50.0% | |
| !! | ATGGCGCCAATTTTGGAGGC+CGG | - | chr1_2:73103014-73103033 | None:intergenic | 55.0% |
| CATTGATGAGCACCAGTCCG+TGG | + | chr1_2:73103952-73103971 | Msa0090970:CDS | 55.0% | |
| ATGTTTGGATGCTGAGGGGG+AGG | + | chr1_2:73104633-73104652 | Msa0090970:three_prime_UTR | 55.0% | |
| TGTTTGGATGCTGAGGGGGA+GGG | + | chr1_2:73104634-73104653 | Msa0090970:three_prime_UTR | 55.0% | |
| GGTTTCCGAGACGCGTGTTC+CGG | + | chr1_2:73103643-73103662 | Msa0090970:CDS | 60.0% | |
| TCCAACCGGAACACGCGTCT+CGG | - | chr1_2:73103651-73103670 | None:intergenic | 60.0% | |
| CTGCTCAACTTCGCGTGACG+TGG | + | chr1_2:73103888-73103907 | Msa0090970:CDS | 60.0% | |
| TGATGAGCACCAGTCCGTGG+AGG | + | chr1_2:73103955-73103974 | Msa0090970:CDS | 60.0% | |
| TCCGAGACGCGTGTTCCGGT+TGG | + | chr1_2:73103647-73103666 | Msa0090970:CDS | 65.0% | |
| GTCAGCCTTCGCTGCCTCCA+CGG | - | chr1_2:73103972-73103991 | None:intergenic | 65.0% | |
| CCTTCGCTGCCTCCACGGAC+TGG | - | chr1_2:73103967-73103986 | None:intergenic | 70.0% | |
| CCAGTCCGTGGAGGCAGCGA+AGG | + | chr1_2:73103964-73103983 | Msa0090970:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 73100542 | 73104697 | 73100542 | ID=Msa0090970;Name=Msa0090970 |
| chr1_2 | mRNA | 73100542 | 73104697 | 73100542 | ID=Msa0090970-mRNA-1;Parent=Msa0090970;Name=Msa0090970-mRNA-1;_AED=0.18;_eAED=0.18;_QI=372|1|1|1|0.75|0.6|5|481|430 |
| chr1_2 | exon | 73100542 | 73100860 | 73100542 | ID=Msa0090970-mRNA-1:exon:25478;Parent=Msa0090970-mRNA-1 |
| chr1_2 | exon | 73101409 | 73101594 | 73101409 | ID=Msa0090970-mRNA-1:exon:25479;Parent=Msa0090970-mRNA-1 |
| chr1_2 | exon | 73102149 | 73102292 | 73102149 | ID=Msa0090970-mRNA-1:exon:25480;Parent=Msa0090970-mRNA-1 |
| chr1_2 | exon | 73102937 | 73103148 | 73102937 | ID=Msa0090970-mRNA-1:exon:25481;Parent=Msa0090970-mRNA-1 |
| chr1_2 | exon | 73103413 | 73104697 | 73103413 | ID=Msa0090970-mRNA-1:exon:25482;Parent=Msa0090970-mRNA-1 |
| chr1_2 | five_prime_UTR | 73100542 | 73100860 | 73100542 | ID=Msa0090970-mRNA-1:five_prime_utr;Parent=Msa0090970-mRNA-1 |
| chr1_2 | five_prime_UTR | 73101409 | 73101461 | 73101409 | ID=Msa0090970-mRNA-1:five_prime_utr;Parent=Msa0090970-mRNA-1 |
| chr1_2 | CDS | 73101462 | 73101594 | 73101462 | ID=Msa0090970-mRNA-1:cds;Parent=Msa0090970-mRNA-1 |
| chr1_2 | CDS | 73102149 | 73102292 | 73102149 | ID=Msa0090970-mRNA-1:cds;Parent=Msa0090970-mRNA-1 |
| chr1_2 | CDS | 73102937 | 73103148 | 73102937 | ID=Msa0090970-mRNA-1:cds;Parent=Msa0090970-mRNA-1 |
| chr1_2 | CDS | 73103413 | 73104216 | 73103413 | ID=Msa0090970-mRNA-1:cds;Parent=Msa0090970-mRNA-1 |
| chr1_2 | three_prime_UTR | 73104217 | 73104697 | 73104217 | ID=Msa0090970-mRNA-1:three_prime_utr;Parent=Msa0090970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
