Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810440 | sp|Q9FN75|AATPI_ARATH | 55.150 | 466 | 189 | 6 | 1 | 452 | 1 | 460 | 3.84e-178 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810440 | G7KF09 | 99.205 | 503 | 4 | 0 | 1 | 503 | 1 | 503 | 0.0 | 1037 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0810440 | -0.825733 | 3.990931e-54 | -8.615850e-47 |
| Msa0004480 | Msa0810440 | 0.828418 | 9.091914e-55 | -8.615850e-47 |
| Msa0011050 | Msa0810440 | 0.831512 | 1.601024e-55 | -8.615850e-47 |
| Msa0030700 | Msa0810440 | 0.804019 | 2.640932e-49 | -8.615850e-47 |
| Msa0042810 | Msa0810440 | 0.833321 | 5.704065e-56 | -8.615850e-47 |
| Msa0043850 | Msa0810440 | 0.831405 | 1.701144e-55 | -8.615850e-47 |
| Msa0048400 | Msa0810440 | 0.803767 | 2.978941e-49 | -8.615850e-47 |
| Msa0054920 | Msa0810440 | 0.810067 | 1.385664e-50 | -8.615850e-47 |
| Msa0058760 | Msa0810440 | 0.805270 | 1.447737e-49 | -8.615850e-47 |
| Msa0060070 | Msa0810440 | 0.807072 | 6.042041e-50 | -8.615850e-47 |
| Msa0060710 | Msa0810440 | -0.808351 | 3.232644e-50 | -8.615850e-47 |
| Msa0077370 | Msa0810440 | 0.814293 | 1.658545e-51 | -8.615850e-47 |
| Msa0078120 | Msa0810440 | 0.802908 | 4.488199e-49 | -8.615850e-47 |
| Msa0082230 | Msa0810440 | 0.817536 | 3.134719e-52 | -8.615850e-47 |
| Msa0082420 | Msa0810440 | 0.827306 | 1.682368e-54 | -8.615850e-47 |
| Msa0089730 | Msa0810440 | 0.836691 | 8.067756e-57 | -8.615850e-47 |
| Msa0090510 | Msa0810440 | 0.824477 | 7.903892e-54 | -8.615850e-47 |
| Msa0094710 | Msa0810440 | 0.856290 | 3.554850e-62 | -8.615850e-47 |
| Msa0100290 | Msa0810440 | 0.811618 | 6.398985e-51 | -8.615850e-47 |
| Msa0117520 | Msa0810440 | 0.808178 | 3.518775e-50 | -8.615850e-47 |
| Msa0632420 | Msa0810440 | 0.812772 | 3.583450e-51 | -8.615850e-47 |
| Msa0641130 | Msa0810440 | 0.842129 | 3.121605e-58 | -8.615850e-47 |
| Msa0665530 | Msa0810440 | -0.815432 | 9.271399e-52 | -8.615850e-47 |
| Msa0666530 | Msa0810440 | 0.804627 | 1.972323e-49 | -8.615850e-47 |
| Msa0679670 | Msa0810440 | 0.805849 | 1.094446e-49 | -8.615850e-47 |
| Msa0693750 | Msa0810440 | 0.816328 | 5.851313e-52 | -8.615850e-47 |
| Msa0697680 | Msa0810440 | 0.818062 | 2.384149e-52 | -8.615850e-47 |
| Msa0698450 | Msa0810440 | 0.815132 | 1.081085e-51 | -8.615850e-47 |
| Msa0698460 | Msa0810440 | 0.813320 | 2.717618e-51 | -8.615850e-47 |
| Msa0713060 | Msa0810440 | 0.807349 | 5.277942e-50 | -8.615850e-47 |
| Msa0737430 | Msa0810440 | 0.818425 | 1.973001e-52 | -8.615850e-47 |
| Msa0742430 | Msa0810440 | 0.842522 | 2.455996e-58 | -8.615850e-47 |
| Msa0743510 | Msa0810440 | 0.802435 | 5.618410e-49 | -8.615850e-47 |
| Msa0744640 | Msa0810440 | 0.834384 | 3.092094e-56 | -8.615850e-47 |
| Msa0753400 | Msa0810440 | 0.820315 | 7.319901e-53 | -8.615850e-47 |
| Msa0772280 | Msa0810440 | 0.918582 | 1.303797e-86 | -8.615850e-47 |
| Msa0772490 | Msa0810440 | 0.825505 | 4.520425e-54 | -8.615850e-47 |
| Msa0795340 | Msa0810440 | 0.803155 | 3.990417e-49 | -8.615850e-47 |
| Msa0798450 | Msa0810440 | 0.821872 | 3.204660e-53 | -8.615850e-47 |
| Msa0810440 | Msa0816630 | 0.812550 | 4.006726e-51 | -8.615850e-47 |
| Msa0810440 | Msa0817710 | 0.869972 | 2.073327e-66 | -8.615850e-47 |
| Msa0810440 | Msa0823540 | 0.846712 | 1.828586e-59 | -8.615850e-47 |
| Msa0810440 | Msa0832620 | 0.817375 | 3.407053e-52 | -8.615850e-47 |
| Msa0810440 | Msa0841730 | 0.835222 | 1.902980e-56 | -8.615850e-47 |
| Msa0810440 | Msa0850540 | 0.801338 | 9.439908e-49 | -8.615850e-47 |
| Msa0810440 | Msa0862620 | 0.854438 | 1.230875e-61 | -8.615850e-47 |
| Msa0810440 | Msa0863990 | 0.847805 | 9.164139e-60 | -8.615850e-47 |
| Msa0810440 | Msa0864820 | -0.823506 | 1.335280e-53 | -8.615850e-47 |
| Msa0810440 | Msa0870460 | -0.803201 | 3.903937e-49 | -8.615850e-47 |
| Msa0810440 | Msa0870510 | 0.816904 | 4.348628e-52 | -8.615850e-47 |
| Msa0810440 | Msa0968050 | 0.816370 | 5.728179e-52 | -8.615850e-47 |
| Msa0810440 | Msa0968470 | -0.832802 | 7.679339e-56 | -8.615850e-47 |
| Msa0810440 | Msa1011250 | 0.854870 | 9.228804e-62 | -8.615850e-47 |
| Msa0810440 | Msa1016960 | 0.825040 | 5.821495e-54 | -8.615850e-47 |
| Msa0810440 | Msa1031460 | 0.879537 | 1.149341e-69 | -8.615850e-47 |
| Msa0810440 | Msa1041720 | 0.807360 | 5.251074e-50 | -8.615850e-47 |
| Msa0810440 | Msa1058200 | 0.816763 | 4.675630e-52 | -8.615850e-47 |
| Msa0810440 | Msa1062080 | 0.803494 | 3.394681e-49 | -8.615850e-47 |
| Msa0810440 | Msa1068380 | 0.828189 | 1.032452e-54 | -8.615850e-47 |
| Msa0810440 | Msa1070540 | 0.885355 | 8.737219e-72 | -8.615850e-47 |
| Msa0810440 | Msa1074210 | 0.813376 | 2.641620e-51 | -8.615850e-47 |
| Msa0810440 | Msa1079720 | -0.801400 | 9.165822e-49 | -8.615850e-47 |
| Msa0810440 | Msa1085610 | -0.800179 | 1.627375e-48 | -8.615850e-47 |
| Msa0810440 | Msa1086490 | -0.807944 | 3.945468e-50 | -8.615850e-47 |
| Msa0810440 | Msa1089190 | 0.813451 | 2.543290e-51 | -8.615850e-47 |
| Msa0810440 | Msa1101240 | 0.887477 | 1.379147e-72 | -8.615850e-47 |
| Msa0810440 | Msa1107200 | 0.806227 | 9.110816e-50 | -8.615850e-47 |
| Msa0810440 | Msa1114680 | 0.819298 | 1.250244e-52 | -8.615850e-47 |
| Msa0810440 | Msa1121300 | 0.820270 | 7.496341e-53 | -8.615850e-47 |
| Msa0810440 | Msa1128270 | 0.804808 | 1.808261e-49 | -8.615850e-47 |
| Msa0810440 | Msa1129300 | -0.808632 | 2.814892e-50 | -8.615850e-47 |
| Msa0810440 | Msa1131090 | 0.809324 | 2.001791e-50 | -8.615850e-47 |
| Msa0810440 | Msa1150280 | 0.803832 | 2.887402e-49 | -8.615850e-47 |
| Msa0810440 | Msa1150780 | 0.809252 | 2.074225e-50 | -8.615850e-47 |
| Msa0810440 | Msa1168640 | 0.834545 | 2.818006e-56 | -8.615850e-47 |
| Msa0810440 | Msa1180930 | 0.815312 | 9.860321e-52 | -8.615850e-47 |
| Msa0810440 | Msa1183140 | 0.856217 | 3.736171e-62 | -8.615850e-47 |
| Msa0810440 | Msa1188350 | 0.817576 | 3.069816e-52 | -8.615850e-47 |
| Msa0810440 | Msa1190100 | -0.846406 | 2.216694e-59 | -8.615850e-47 |
| Msa0810440 | Msa1199870 | 0.803407 | 3.537636e-49 | -8.615850e-47 |
| Msa0810440 | Msa1208450 | -0.864434 | 1.219553e-64 | -8.615850e-47 |
| Msa0810440 | Msa1208990 | 0.855293 | 6.952460e-62 | -8.615850e-47 |
| Msa0810440 | Msa1212470 | 0.807086 | 6.002638e-50 | -8.615850e-47 |
| Msa0810440 | Msa1214170 | 0.826192 | 3.104434e-54 | -8.615850e-47 |
| Msa0810440 | Msa1217260 | 0.811573 | 6.544582e-51 | -8.615850e-47 |
| Msa0810440 | Msa1237890 | 0.824005 | 1.020226e-53 | -8.615850e-47 |
| Msa0810440 | Msa1238600 | 0.800178 | 1.627856e-48 | -8.615850e-47 |
| Msa0810440 | Msa1252810 | 0.814307 | 1.646907e-51 | -8.615850e-47 |
| Msa0810440 | Msa1258030 | -0.801430 | 9.036028e-49 | -8.615850e-47 |
| Msa0810440 | Msa1259860 | 0.814303 | 1.650486e-51 | -8.615850e-47 |
| Msa0810440 | Msa1260060 | 0.841638 | 4.209700e-58 | -8.615850e-47 |
| Msa0810440 | Msa1268230 | 0.816082 | 6.643137e-52 | -8.615850e-47 |
| Msa0810440 | Msa1272010 | 0.830326 | 3.127275e-55 | -8.615850e-47 |
| Msa0810440 | Msa1296240 | 0.815062 | 1.120588e-51 | -8.615850e-47 |
| Msa0810440 | Msa1298390 | -0.832886 | 7.317340e-56 | -8.615850e-47 |
| Msa0810440 | Msa1299780 | 0.800097 | 1.691281e-48 | -8.615850e-47 |
| Msa0810440 | Msa1309760 | 0.861394 | 1.058363e-63 | -8.615850e-47 |
| Msa0810440 | Msa1318550 | 0.841354 | 5.000694e-58 | -8.615850e-47 |
| Msa0810440 | Msa1328240 | 0.800436 | 1.442683e-48 | -8.615850e-47 |
| Msa0810440 | Msa1329900 | 0.811170 | 8.003007e-51 | -8.615850e-47 |
| Msa0810440 | Msa1340200 | 0.807813 | 4.207025e-50 | -8.615850e-47 |
| Msa0810440 | Msa1350700 | 0.815423 | 9.314984e-52 | -8.615850e-47 |
| Msa0810440 | Msa1358090 | 0.813514 | 2.463463e-51 | -8.615850e-47 |
| Msa0810440 | Msa1359400 | 0.816136 | 6.461394e-52 | -8.615850e-47 |
| Msa0810440 | Msa1360020 | 0.825437 | 4.690706e-54 | -8.615850e-47 |
| Msa0810440 | Msa1360260 | 0.825421 | 4.732197e-54 | -8.615850e-47 |
| Msa0810440 | Msa1363820 | -0.808621 | 2.830633e-50 | -8.615850e-47 |
| Msa0810440 | Msa1364080 | 0.816120 | 6.513129e-52 | -8.615850e-47 |
| Msa0810440 | Msa1368360 | 0.811174 | 7.987743e-51 | -8.615850e-47 |
| Msa0810440 | Msa1368610 | 0.828162 | 1.048005e-54 | -8.615850e-47 |
| Msa0810440 | Msa1369920 | -0.839789 | 1.283815e-57 | -8.615850e-47 |
| Msa0810440 | Msa1370810 | 0.803639 | 3.166655e-49 | -8.615850e-47 |
| Msa0810440 | Msa1375610 | -0.819112 | 1.378173e-52 | -8.615850e-47 |
| Msa0810440 | Msa1376550 | -0.825859 | 3.725434e-54 | -8.615850e-47 |
| Msa0810440 | Msa1379020 | 0.916814 | 1.131460e-85 | -8.615850e-47 |
| Msa0810440 | Msa1407880 | 0.918298 | 1.850584e-86 | -8.615850e-47 |
| Msa0810440 | Msa1416100 | 0.803122 | 4.052434e-49 | -8.615850e-47 |
| Msa0810440 | Msa1419840 | 0.816484 | 5.401302e-52 | -8.615850e-47 |
| Msa0810440 | Msa1465860 | 0.805813 | 1.113599e-49 | -8.615850e-47 |
| Msa0137980 | Msa0810440 | 0.833515 | 5.100848e-56 | -8.615850e-47 |
| Msa0147790 | Msa0810440 | 0.822426 | 2.384354e-53 | -8.615850e-47 |
| Msa0151220 | Msa0810440 | 0.837694 | 4.468271e-57 | -8.615850e-47 |
| Msa0174100 | Msa0810440 | 0.807735 | 4.372299e-50 | -8.615850e-47 |
| Msa0174820 | Msa0810440 | 0.806339 | 8.628973e-50 | -8.615850e-47 |
| Msa0183910 | Msa0810440 | 0.808733 | 2.678715e-50 | -8.615850e-47 |
| Msa0187590 | Msa0810440 | -0.806838 | 6.771131e-50 | -8.615850e-47 |
| Msa0206450 | Msa0810440 | 0.802314 | 5.949245e-49 | -8.615850e-47 |
| Msa0223140 | Msa0810440 | 0.816272 | 6.023627e-52 | -8.615850e-47 |
| Msa0224130 | Msa0810440 | 0.816370 | 5.728201e-52 | -8.615850e-47 |
| Msa0370580 | Msa0810440 | -0.802622 | 5.140204e-49 | -8.615850e-47 |
| Msa0372570 | Msa0810440 | -0.800275 | 1.555528e-48 | -8.615850e-47 |
| Msa0380400 | Msa0810440 | -0.824984 | 6.002310e-54 | -8.615850e-47 |
| Msa0388360 | Msa0810440 | 0.836365 | 9.765162e-57 | -8.615850e-47 |
| Msa0388730 | Msa0810440 | 0.800178 | 1.628336e-48 | -8.615850e-47 |
| Msa0403470 | Msa0810440 | -0.857443 | 1.626654e-62 | -8.615850e-47 |
| Msa0427310 | Msa0810440 | 0.810382 | 1.185190e-50 | -8.615850e-47 |
| Msa0428200 | Msa0810440 | 0.837154 | 6.145501e-57 | -8.615850e-47 |
| Msa0431900 | Msa0810440 | 0.832393 | 9.700889e-56 | -8.615850e-47 |
| Msa0462450 | Msa0810440 | 0.839759 | 1.307295e-57 | -8.615850e-47 |
| Msa0474560 | Msa0810440 | 0.841972 | 3.436337e-58 | -8.615850e-47 |
| Msa0476170 | Msa0810440 | -0.825451 | 4.655399e-54 | -8.615850e-47 |
| Msa0476600 | Msa0810440 | -0.804299 | 2.309154e-49 | -8.615850e-47 |
| Msa0265270 | Msa0810440 | 0.820580 | 6.362940e-53 | -8.615850e-47 |
| Msa0266220 | Msa0810440 | 0.810696 | 1.013914e-50 | -8.615850e-47 |
| Msa0287680 | Msa0810440 | 0.801559 | 8.503131e-49 | -8.615850e-47 |
| Msa0302840 | Msa0810440 | 0.802416 | 5.668179e-49 | -8.615850e-47 |
| Msa0339720 | Msa0810440 | 0.811287 | 7.548069e-51 | -8.615850e-47 |
| Msa0497120 | Msa0810440 | 0.802192 | 6.303321e-49 | -8.615850e-47 |
| Msa0500610 | Msa0810440 | -0.801045 | 1.083601e-48 | -8.615850e-47 |
| Msa0512950 | Msa0810440 | -0.837229 | 5.879911e-57 | -8.615850e-47 |
| Msa0517990 | Msa0810440 | 0.818885 | 1.551559e-52 | -8.615850e-47 |
| Msa0519160 | Msa0810440 | 0.834623 | 2.692688e-56 | -8.615850e-47 |
| Msa0520770 | Msa0810440 | 0.828058 | 1.110377e-54 | -8.615850e-47 |
| Msa0529000 | Msa0810440 | 0.807088 | 5.997101e-50 | -8.615850e-47 |
| Msa0536430 | Msa0810440 | 0.821441 | 4.030805e-53 | -8.615850e-47 |
| Msa0545050 | Msa0810440 | 0.842612 | 2.325304e-58 | -8.615850e-47 |
| Msa0559450 | Msa0810440 | -0.815446 | 9.208782e-52 | -8.615850e-47 |
| Msa0560460 | Msa0810440 | 0.801092 | 1.060082e-48 | -8.615850e-47 |
| Msa0576120 | Msa0810440 | -0.825245 | 5.208341e-54 | -8.615850e-47 |
| Msa0584580 | Msa0810440 | 0.827286 | 1.701198e-54 | -8.615850e-47 |
| Msa0584600 | Msa0810440 | 0.834904 | 2.288325e-56 | -8.615850e-47 |
| Msa0588590 | Msa0810440 | 0.842807 | 2.063846e-58 | -8.615850e-47 |
| Msa0588620 | Msa0810440 | 0.807939 | 3.956441e-50 | -8.615850e-47 |
| Msa0588670 | Msa0810440 | 0.802326 | 5.916631e-49 | -8.615850e-47 |
| Msa0592330 | Msa0810440 | 0.814173 | 1.763216e-51 | -8.615850e-47 |
| Msa0592530 | Msa0810440 | 0.801453 | 8.939057e-49 | -8.615850e-47 |
| Msa0600590 | Msa0810440 | 0.847522 | 1.096601e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810440 | MtrunA17_Chr5g0404651 | 99.205 | 503 | 4 | 0 | 1 | 503 | 1 | 503 | 0.0 | 1037 |
| Msa0810440 | MtrunA17_Chr8g0372701 | 48.069 | 466 | 230 | 5 | 7 | 469 | 17 | 473 | 2.09e-159 | 462 |
| Msa0810440 | MtrunA17_Chr2g0315911 | 45.140 | 463 | 241 | 5 | 7 | 465 | 1 | 454 | 3.35e-145 | 424 |
| Msa0810440 | MtrunA17_Chr2g0315991 | 46.121 | 464 | 234 | 6 | 7 | 468 | 1 | 450 | 1.34e-144 | 423 |
| Msa0810440 | MtrunA17_Chr2g0315921 | 46.652 | 448 | 223 | 9 | 11 | 450 | 3 | 442 | 2.52e-140 | 411 |
| Msa0810440 | MtrunA17_Chr2g0315971 | 45.727 | 433 | 225 | 4 | 18 | 450 | 8 | 430 | 3.04e-138 | 416 |
| Msa0810440 | MtrunA17_Chr2g0315971 | 50.735 | 272 | 126 | 4 | 177 | 446 | 438 | 703 | 2.93e-88 | 286 |
| Msa0810440 | MtrunA17_Chr2g0315981 | 43.146 | 445 | 246 | 3 | 18 | 460 | 8 | 447 | 3.49e-136 | 401 |
| Msa0810440 | MtrunA17_Chr2g0316041 | 46.883 | 401 | 201 | 6 | 68 | 465 | 1 | 392 | 1.71e-127 | 378 |
| Msa0810440 | MtrunA17_Chr2g0316021 | 41.328 | 467 | 227 | 6 | 19 | 485 | 9 | 428 | 3.32e-127 | 377 |
| Msa0810440 | MtrunA17_Chr5g0404661 | 40.000 | 460 | 252 | 6 | 9 | 450 | 21 | 474 | 4.76e-123 | 369 |
| Msa0810440 | MtrunA17_Chr2g0292561 | 41.597 | 476 | 237 | 9 | 11 | 462 | 7 | 465 | 1.03e-122 | 367 |
| Msa0810440 | MtrunA17_Chr1g0155131 | 42.038 | 471 | 227 | 9 | 13 | 454 | 6 | 459 | 1.65e-121 | 364 |
| Msa0810440 | MtrunA17_Chr6g0452391 | 39.785 | 465 | 238 | 9 | 13 | 446 | 6 | 459 | 6.31e-115 | 349 |
| Msa0810440 | MtrunA17_Chr7g0215951 | 39.490 | 471 | 240 | 9 | 11 | 447 | 2 | 461 | 2.46e-114 | 347 |
| Msa0810440 | MtrunA17_Chr4g0059811 | 38.622 | 479 | 247 | 8 | 11 | 451 | 7 | 476 | 8.90e-114 | 346 |
| Msa0810440 | MtrunA17_Chr4g0072491 | 39.752 | 483 | 245 | 8 | 14 | 460 | 5 | 477 | 1.13e-113 | 345 |
| Msa0810440 | MtrunA17_Chr6g0452371 | 39.871 | 464 | 239 | 8 | 13 | 446 | 8 | 461 | 1.26e-112 | 343 |
| Msa0810440 | MtrunA17_Chr6g0452451 | 37.924 | 472 | 243 | 7 | 13 | 445 | 8 | 468 | 1.66e-109 | 335 |
| Msa0810440 | MtrunA17_Chr1g0155121 | 39.278 | 471 | 236 | 9 | 13 | 446 | 4 | 461 | 6.54e-108 | 330 |
| Msa0810440 | MtrunA17_Chr6g0452401 | 37.691 | 459 | 233 | 7 | 30 | 446 | 1 | 448 | 2.80e-105 | 323 |
| Msa0810440 | MtrunA17_Chr6g0466811 | 39.865 | 444 | 236 | 6 | 19 | 446 | 23 | 451 | 8.30e-105 | 322 |
| Msa0810440 | MtrunA17_Chr3g0134831 | 46.844 | 301 | 138 | 4 | 168 | 453 | 1 | 294 | 2.26e-100 | 303 |
| Msa0810440 | MtrunA17_Chr6g0452411 | 41.910 | 377 | 171 | 5 | 107 | 446 | 1 | 366 | 1.90e-99 | 305 |
| Msa0810440 | MtrunA17_Chr2g0308991 | 36.807 | 451 | 243 | 8 | 23 | 446 | 9 | 444 | 3.93e-96 | 300 |
| Msa0810440 | MtrunA17_Chr6g0452361 | 52.814 | 231 | 104 | 2 | 221 | 446 | 1 | 231 | 1.46e-81 | 254 |
| Msa0810440 | MtrunA17_Chr6g0452481 | 46.640 | 253 | 129 | 2 | 200 | 446 | 2 | 254 | 1.31e-73 | 235 |
| Msa0810440 | MtrunA17_Chr7g0276031 | 32.405 | 395 | 222 | 10 | 63 | 453 | 56 | 409 | 1.99e-65 | 219 |
| Msa0810440 | MtrunA17_Chr3g0127381 | 33.424 | 368 | 209 | 9 | 71 | 434 | 66 | 401 | 1.55e-63 | 214 |
| Msa0810440 | MtrunA17_Chr8g0346371 | 38.206 | 301 | 173 | 4 | 155 | 453 | 129 | 418 | 5.75e-61 | 207 |
| Msa0810440 | MtrunA17_Chr5g0404671 | 59.048 | 105 | 42 | 1 | 343 | 446 | 1 | 105 | 7.52e-41 | 144 |
| Msa0810440 | MtrunA17_Chr5g0404681 | 45.455 | 121 | 59 | 1 | 155 | 275 | 39 | 152 | 8.30e-36 | 130 |
| Msa0810440 | MtrunA17_Chr5g0404691 | 41.250 | 160 | 78 | 4 | 300 | 453 | 7 | 156 | 2.00e-34 | 127 |
| Msa0810440 | MtrunA17_Chr1g0148871 | 48.246 | 114 | 58 | 1 | 333 | 446 | 19 | 131 | 3.37e-29 | 113 |
| Msa0810440 | MtrunA17_Chr3g0145011 | 39.216 | 153 | 74 | 7 | 241 | 382 | 166 | 310 | 1.15e-15 | 79.0 |
| Msa0810440 | MtrunA17_Chr3g0141901 | 38.562 | 153 | 75 | 7 | 241 | 382 | 163 | 307 | 2.03e-15 | 78.2 |
| Msa0810440 | MtrunA17_Chr7g0217421 | 36.612 | 183 | 102 | 6 | 215 | 389 | 40 | 216 | 2.96e-15 | 77.8 |
| Msa0810440 | MtrunA17_Chr3g0108321 | 34.731 | 167 | 88 | 6 | 226 | 380 | 171 | 328 | 9.60e-15 | 75.9 |
| Msa0810440 | MtrunA17_Chr8g0362771 | 30.851 | 188 | 106 | 6 | 230 | 400 | 252 | 432 | 5.79e-14 | 74.7 |
| Msa0810440 | MtrunA17_Chr7g0262801 | 34.783 | 161 | 92 | 5 | 229 | 381 | 202 | 357 | 6.86e-14 | 73.6 |
| Msa0810440 | MtrunA17_Chr1g0182711 | 34.161 | 161 | 93 | 5 | 229 | 381 | 203 | 358 | 1.34e-13 | 72.8 |
| Msa0810440 | MtrunA17_Chr4g0050561 | 31.429 | 175 | 108 | 5 | 214 | 380 | 156 | 326 | 2.60e-13 | 71.6 |
| Msa0810440 | MtrunA17_Chr1g0192151 | 31.792 | 173 | 97 | 7 | 229 | 389 | 182 | 345 | 3.49e-13 | 71.2 |
| Msa0810440 | MtrunA17_Chr4g0014731 | 31.792 | 173 | 97 | 7 | 229 | 389 | 183 | 346 | 4.22e-13 | 71.2 |
| Msa0810440 | MtrunA17_Chr1g0211521 | 41.121 | 107 | 49 | 6 | 376 | 471 | 5 | 108 | 7.16e-13 | 65.5 |
| Msa0810440 | MtrunA17_Chr2g0315961 | 46.875 | 64 | 33 | 1 | 376 | 439 | 1 | 63 | 1.80e-12 | 62.8 |
| Msa0810440 | MtrunA17_Chr6g0476861 | 33.333 | 183 | 103 | 8 | 209 | 380 | 192 | 366 | 3.37e-12 | 68.9 |
| Msa0810440 | MtrunA17_Chr7g0260601 | 32.990 | 194 | 111 | 8 | 216 | 398 | 242 | 427 | 3.40e-12 | 68.9 |
| Msa0810440 | MtrunA17_Chr7g0248361 | 28.800 | 250 | 154 | 10 | 216 | 447 | 194 | 437 | 1.20e-11 | 67.0 |
| Msa0810440 | MtrunA17_Chr3g0135761 | 28.814 | 177 | 110 | 5 | 230 | 398 | 237 | 405 | 1.41e-11 | 67.0 |
| Msa0810440 | MtrunA17_Chr7g0264521 | 31.288 | 163 | 96 | 4 | 229 | 383 | 221 | 375 | 2.59e-11 | 66.2 |
| Msa0810440 | MtrunA17_Chr4g0031821 | 31.841 | 201 | 118 | 8 | 209 | 398 | 315 | 507 | 2.64e-11 | 66.2 |
| Msa0810440 | MtrunA17_Chr3g0094871 | 27.273 | 275 | 165 | 10 | 203 | 452 | 3 | 267 | 2.71e-11 | 65.5 |
| Msa0810440 | MtrunA17_Chr7g0255721 | 31.765 | 170 | 94 | 7 | 225 | 386 | 401 | 556 | 2.84e-11 | 66.2 |
| Msa0810440 | MtrunA17_Chr7g0255651 | 29.375 | 160 | 99 | 5 | 243 | 393 | 311 | 465 | 3.55e-11 | 65.5 |
| Msa0810440 | MtrunA17_Chr3g0135781 | 32.895 | 152 | 86 | 6 | 230 | 373 | 70 | 213 | 4.02e-11 | 62.8 |
| Msa0810440 | MtrunA17_Chr8g0388371 | 27.919 | 197 | 112 | 7 | 230 | 401 | 419 | 610 | 5.66e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810440 | AT5G17760.1 | 55.150 | 466 | 189 | 6 | 1 | 452 | 1 | 460 | 3.90e-179 | 513 |
| Msa0810440 | AT5G17740.1 | 52.229 | 471 | 201 | 8 | 1 | 457 | 1 | 461 | 2.41e-173 | 499 |
| Msa0810440 | AT5G17730.1 | 51.965 | 458 | 203 | 7 | 1 | 451 | 1 | 448 | 4.65e-167 | 481 |
| Msa0810440 | AT3G50930.1 | 50.000 | 476 | 227 | 4 | 7 | 474 | 55 | 527 | 8.72e-166 | 481 |
| Msa0810440 | AT2G18190.1 | 47.967 | 492 | 220 | 6 | 9 | 491 | 11 | 475 | 1.70e-162 | 470 |
| Msa0810440 | AT2G18193.1 | 50.905 | 442 | 197 | 4 | 16 | 451 | 17 | 444 | 3.60e-162 | 469 |
| Msa0810440 | AT3G50940.1 | 50.000 | 422 | 204 | 4 | 28 | 449 | 30 | 444 | 2.49e-156 | 452 |
| Msa0810440 | AT5G17750.1 | 47.174 | 407 | 181 | 4 | 1 | 404 | 1 | 376 | 2.28e-139 | 407 |
| Msa0810440 | AT5G40000.1 | 39.300 | 486 | 238 | 11 | 14 | 470 | 8 | 465 | 9.78e-118 | 355 |
| Msa0810440 | AT5G17760.2 | 52.134 | 328 | 143 | 3 | 1 | 320 | 1 | 322 | 1.15e-116 | 347 |
| Msa0810440 | AT4G05380.1 | 42.424 | 462 | 231 | 12 | 6 | 450 | 8 | 451 | 1.51e-115 | 348 |
| Msa0810440 | AT1G43910.1 | 40.717 | 474 | 233 | 9 | 1 | 451 | 4 | 452 | 1.83e-115 | 349 |
| Msa0810440 | AT3G28600.1 | 39.666 | 479 | 236 | 10 | 15 | 461 | 5 | 462 | 5.75e-115 | 348 |
| Msa0810440 | AT3G28610.1 | 40.215 | 465 | 225 | 9 | 17 | 449 | 6 | 449 | 1.16e-114 | 347 |
| Msa0810440 | AT3G28540.2 | 39.957 | 468 | 236 | 8 | 7 | 443 | 1 | 454 | 1.42e-114 | 348 |
| Msa0810440 | AT3G28540.1 | 39.957 | 468 | 236 | 8 | 7 | 443 | 1 | 454 | 1.47e-114 | 348 |
| Msa0810440 | AT4G25835.1 | 40.498 | 442 | 229 | 5 | 14 | 431 | 5 | 436 | 1.41e-113 | 345 |
| Msa0810440 | AT5G57480.1 | 39.278 | 471 | 238 | 8 | 14 | 448 | 5 | 463 | 7.08e-111 | 339 |
| Msa0810440 | AT3G28510.1 | 38.936 | 470 | 251 | 7 | 7 | 449 | 1 | 461 | 1.51e-110 | 338 |
| Msa0810440 | AT5G40010.1 | 38.242 | 455 | 240 | 8 | 13 | 436 | 7 | 451 | 1.50e-107 | 330 |
| Msa0810440 | AT4G30250.1 | 40.127 | 471 | 238 | 8 | 11 | 448 | 2 | 461 | 4.53e-107 | 329 |
| Msa0810440 | AT4G30250.2 | 40.127 | 471 | 238 | 8 | 11 | 448 | 4 | 463 | 5.64e-107 | 329 |
| Msa0810440 | AT3G28570.1 | 38.936 | 470 | 232 | 11 | 18 | 465 | 10 | 446 | 1.86e-104 | 320 |
| Msa0810440 | AT3G28570.2 | 38.936 | 470 | 232 | 11 | 18 | 465 | 17 | 453 | 3.98e-104 | 319 |
| Msa0810440 | AT3G28580.1 | 37.744 | 461 | 241 | 11 | 7 | 436 | 1 | 446 | 3.45e-102 | 316 |
| Msa0810440 | AT3G28520.1 | 37.449 | 486 | 246 | 11 | 22 | 463 | 2 | 473 | 1.45e-98 | 306 |
| Msa0810440 | AT3G28600.2 | 50.853 | 293 | 125 | 5 | 178 | 452 | 123 | 414 | 5.18e-97 | 300 |
| Msa0810440 | AT3G28580.2 | 36.117 | 443 | 251 | 11 | 7 | 436 | 1 | 424 | 2.42e-90 | 284 |
| Msa0810440 | AT3G29800.1 | 36.638 | 464 | 227 | 14 | 26 | 479 | 5 | 411 | 3.01e-88 | 278 |
| Msa0810440 | AT2G46620.1 | 35.864 | 382 | 202 | 10 | 63 | 434 | 55 | 403 | 1.12e-72 | 239 |
| Msa0810440 | AT4G05340.1 | 63.636 | 77 | 28 | 0 | 324 | 400 | 17 | 93 | 3.01e-28 | 108 |
| Msa0810440 | AT3G28560.1 | 28.125 | 224 | 142 | 5 | 7 | 224 | 1 | 211 | 4.88e-24 | 101 |
| Msa0810440 | AT5G43010.1 | 38.562 | 153 | 75 | 7 | 241 | 382 | 163 | 307 | 3.45e-15 | 77.8 |
| Msa0810440 | AT1G45000.1 | 38.562 | 153 | 75 | 7 | 241 | 382 | 163 | 307 | 5.51e-15 | 77.4 |
| Msa0810440 | AT5G58290.1 | 34.731 | 167 | 88 | 6 | 226 | 380 | 164 | 321 | 7.74e-15 | 77.0 |
| Msa0810440 | AT2G20140.1 | 34.783 | 161 | 92 | 5 | 229 | 381 | 200 | 355 | 3.49e-14 | 75.1 |
| Msa0810440 | AT4G29040.1 | 34.783 | 161 | 92 | 5 | 229 | 381 | 200 | 355 | 5.41e-14 | 74.3 |
| Msa0810440 | AT1G09100.1 | 32.370 | 173 | 96 | 7 | 229 | 389 | 182 | 345 | 8.74e-14 | 73.6 |
| Msa0810440 | AT5G19990.1 | 31.217 | 189 | 117 | 6 | 214 | 393 | 158 | 342 | 3.25e-13 | 72.0 |
| Msa0810440 | AT5G19990.3 | 31.217 | 189 | 117 | 6 | 214 | 393 | 158 | 342 | 3.25e-13 | 72.0 |
| Msa0810440 | AT5G20000.1 | 31.217 | 189 | 117 | 6 | 214 | 393 | 158 | 342 | 3.34e-13 | 72.0 |
| Msa0810440 | AT5G19990.2 | 31.429 | 175 | 108 | 5 | 214 | 380 | 100 | 270 | 5.61e-13 | 70.9 |
| Msa0810440 | AT3G02450.1 | 32.995 | 197 | 108 | 8 | 243 | 428 | 359 | 542 | 1.22e-12 | 70.9 |
| Msa0810440 | AT3G53230.1 | 31.288 | 163 | 96 | 4 | 229 | 383 | 220 | 374 | 3.50e-11 | 66.2 |
Find 87 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATAACATTCTTCATTTC+TGG | 0.112367 | 5_3:+38862351 | None:intergenic |
| TACTGCTAATAGGTCTATTT+TGG | 0.170805 | 5_3:-38862121 | Msa0810440:CDS |
| TCCCATGATAATCCTTTCTT+TGG | 0.247677 | 5_3:-38859061 | Msa0810440:CDS |
| CTCACTATTCGGTTAGAAAA+AGG | 0.294914 | 5_3:-38862711 | Msa0810440:CDS |
| TTAACTTTATAGATGGATTA+TGG | 0.296200 | 5_3:-38859243 | Msa0810440:CDS |
| AAAGTACAAGGAAGTTGTTT+TGG | 0.317579 | 5_3:-38862535 | Msa0810440:CDS |
| TGGATGCAGTTGACGCTATC+TGG | 0.331920 | 5_3:-38859271 | Msa0810440:intron |
| TTGTATGGTCCTCCAGGAAC+TGG | 0.332354 | 5_3:-38862252 | Msa0810440:CDS |
| AAACTAGATTTCCCAGTTCC+TGG | 0.339978 | 5_3:+38862240 | None:intergenic |
| GGATTACTTAACTTTATAGA+TGG | 0.342287 | 5_3:-38859250 | Msa0810440:CDS |
| GTTGTTGAAGAGGAAGAAAA+TGG | 0.344152 | 5_3:-38858933 | Msa0810440:CDS |
| AACACTGCTTATTGTTATAG+TGG | 0.352047 | 5_3:-38862435 | Msa0810440:CDS |
| CTTTGAGAAAACATTATGTT+TGG | 0.364454 | 5_3:+38863026 | None:intergenic |
| ATAAGAAAGTTGGTAGGGCT+TGG | 0.373964 | 5_3:-38862290 | Msa0810440:CDS |
| ATGTGCATGTCCATTCTTCC+TGG | 0.376522 | 5_3:+38859145 | None:intergenic |
| ATGTTGCTTATCAAGGCTTA+AGG | 0.385316 | 5_3:-38858683 | Msa0810440:three_prime_UTR |
| AAAATAGTTCTAGTACAGTT+TGG | 0.388573 | 5_3:+38858606 | None:intergenic |
| TGCTTCTTGCTACTGCTAAT+AGG | 0.398837 | 5_3:-38862131 | Msa0810440:CDS |
| CCTTTCTTTGGAGAGATTGA+AGG | 0.403654 | 5_3:-38859049 | Msa0810440:CDS |
| ATGTCTTATTGTTCTTATGA+AGG | 0.415116 | 5_3:-38859118 | Msa0810440:CDS |
| CTGGATCTAATCTTTCTTTG+TGG | 0.418635 | 5_3:+38859179 | None:intergenic |
| ATCTAGTTTGATTGCTGCTA+TGG | 0.422293 | 5_3:-38862226 | Msa0810440:CDS |
| TATCATGCTGCTTCGTTCCA+TGG | 0.423977 | 5_3:-38862949 | Msa0810440:CDS |
| AACATTTGAAACACTTGCAA+TGG | 0.424026 | 5_3:-38862376 | Msa0810440:CDS |
| ATTGTTATAGTGGTGTGAAA+TGG | 0.427762 | 5_3:-38862425 | Msa0810440:CDS |
| TTTGTAATTGTGTTCAGCTA+TGG | 0.430355 | 5_3:-38858756 | Msa0810440:exon |
| AAACGTGGTTATTTGTTGTA+TGG | 0.444569 | 5_3:-38862267 | Msa0810440:CDS |
| CTTCCTGGCCTTAAAAGTGC+TGG | 0.444730 | 5_3:+38859160 | None:intergenic |
| TTGTTATAGTGGTGTGAAAT+GGG | 0.444869 | 5_3:-38862424 | Msa0810440:CDS |
| CTCCAAAGAAAGGATTATCA+TGG | 0.452994 | 5_3:+38859059 | None:intergenic |
| TTCGTTCTTCATCAATTCCT+CGG | 0.463547 | 5_3:+38858988 | None:intergenic |
| CCTTCTCCATGCCTCCTCTC+AGG | 0.464945 | 5_3:+38862066 | None:intergenic |
| AATTCCTCGGCAACTTGTGC+AGG | 0.473590 | 5_3:+38859001 | None:intergenic |
| TATTTGTTGTATGGTCCTCC+AGG | 0.478870 | 5_3:-38862258 | Msa0810440:CDS |
| TAAACAGCAAAATGATATAC+AGG | 0.483102 | 5_3:-38862040 | Msa0810440:intron |
| GATTATGAGAAGTAAAGAAT+GGG | 0.489931 | 5_3:-38858573 | Msa0810440:three_prime_UTR |
| AGGTAGCCACGGATTGGTTG+TGG | 0.490094 | 5_3:+38862912 | None:intergenic |
| CTATGATGAGTGTGAGTGTA+GGG | 0.494050 | 5_3:+38862853 | None:intergenic |
| CCTTCAATCTCTCCAAAGAA+AGG | 0.498070 | 5_3:+38859049 | None:intergenic |
| GATATATTTGATCTTCAACT+TGG | 0.500692 | 5_3:-38862186 | Msa0810440:CDS |
| TGATTATGAGAAGTAAAGAA+TGG | 0.507488 | 5_3:-38858574 | Msa0810440:three_prime_UTR |
| ATGTTTGGTTTGTCAAGTGA+AGG | 0.508758 | 5_3:+38863041 | None:intergenic |
| AGGAAAACCGTTGTACATAT+CGG | 0.511083 | 5_3:+38862677 | None:intergenic |
| CTCATCATAGAAGAATCAAC+AGG | 0.511570 | 5_3:-38862840 | Msa0810440:CDS |
| ATGTTGTTGTTACTCAAAGA+AGG | 0.525296 | 5_3:-38858805 | Msa0810440:CDS |
| GACGCGGAGGCGACGCTCGA+AGG | 0.532422 | 5_3:-38858965 | Msa0810440:CDS |
| CAGCATGATAGAAGCTGTCA+TGG | 0.535622 | 5_3:+38862962 | None:intergenic |
| TTAGCTTTATCAAGAATGAA+AGG | 0.540681 | 5_3:+38862501 | None:intergenic |
| TTTGGTTTGTCAAGTGAAGG+GGG | 0.549517 | 5_3:+38863044 | None:intergenic |
| GCAAGTGTTTCAAATGTTGA+AGG | 0.550183 | 5_3:+38862381 | None:intergenic |
| TAGGCTGAGAAAATTGTAGA+TGG | 0.553302 | 5_3:+38862990 | None:intergenic |
| TGGAATGAGTTCTTGTGCCA+TGG | 0.553873 | 5_3:+38862932 | None:intergenic |
| TCATATATATTGAGAAACAT+AGG | 0.557343 | 5_3:-38863098 | None:intergenic |
| TTGTAAAGGTAGCCACGGAT+TGG | 0.558453 | 5_3:+38862906 | None:intergenic |
| GGTAGCGGAAGGTGTTGTAA+AGG | 0.559219 | 5_3:+38862892 | None:intergenic |
| TGTTTGGTTTGTCAAGTGAA+GGG | 0.562038 | 5_3:+38863042 | None:intergenic |
| GATTTGTCAAGTTGTTGAAG+AGG | 0.562772 | 5_3:-38858943 | Msa0810440:CDS |
| CCTGAGAGGAGGCATGGAGA+AGG | 0.567782 | 5_3:-38862066 | Msa0810440:CDS |
| GAGAAAATTGTAGATGGTGA+AGG | 0.570617 | 5_3:+38862996 | None:intergenic |
| TCCAAAGAAAGGATTATCAT+GGG | 0.577137 | 5_3:+38859060 | None:intergenic |
| GATATTCCTGAGAGGAGGCA+TGG | 0.578540 | 5_3:-38862072 | Msa0810440:CDS |
| TGTACTATTACATCACTAAG+TGG | 0.579899 | 5_3:-38858528 | Msa0810440:three_prime_UTR |
| GATGGATTATGGTCAAGTTG+TGG | 0.580818 | 5_3:-38859232 | Msa0810440:CDS |
| GTTTGGTTTGTCAAGTGAAG+GGG | 0.585310 | 5_3:+38863043 | None:intergenic |
| CAAGTGTTTCAAATGTTGAA+GGG | 0.590645 | 5_3:+38862382 | None:intergenic |
| TGTATGGTCCTCCAGGAACT+GGG | 0.595574 | 5_3:-38862251 | Msa0810440:CDS |
| GTTGGTAGGGCTTGGAAACG+TGG | 0.595739 | 5_3:-38862282 | Msa0810440:CDS |
| ATTATGAGAAGTAAAGAATG+GGG | 0.599247 | 5_3:-38858572 | Msa0810440:three_prime_UTR |
| ACTCAGCTGCATCATAGACT+TGG | 0.603542 | 5_3:+38862805 | None:intergenic |
| AGAAGCTGTCATGGATGCAT+AGG | 0.604079 | 5_3:+38862971 | None:intergenic |
| CAAATGAATCTCCATTTGAG+AGG | 0.606336 | 5_3:+38862657 | None:intergenic |
| TTGAAGAGGAAGAAAATGGA+AGG | 0.607954 | 5_3:-38858929 | Msa0810440:CDS |
| AGTGTGAGTGTAGGGGAACG+TGG | 0.609142 | 5_3:+38862861 | None:intergenic |
| AGGACAAGAGGTTATAAGAG+AGG | 0.609200 | 5_3:-38858785 | Msa0810440:CDS |
| TCTATGATGAGTGTGAGTGT+AGG | 0.612777 | 5_3:+38862852 | None:intergenic |
| GTTACTCAAAGAAGGACAAG+AGG | 0.617295 | 5_3:-38858797 | Msa0810440:CDS |
| AGGTGTTGTAAAGGTAGCCA+CGG | 0.626883 | 5_3:+38862901 | None:intergenic |
| GATGAAGAACGAAGACGCGG+AGG | 0.643880 | 5_3:-38858978 | Msa0810440:CDS |
| AACACCTGCACAAGTTGCCG+AGG | 0.645385 | 5_3:-38859005 | Msa0810440:CDS |
| GTATTGATATTCCTGAGAGG+AGG | 0.657296 | 5_3:-38862077 | Msa0810440:CDS |
| AAATTAACCGATATGTACAA+CGG | 0.665907 | 5_3:-38862684 | Msa0810440:CDS |
| CTCATTCCACAACCAATCCG+TGG | 0.669794 | 5_3:-38862918 | Msa0810440:CDS |
| TTATGAGAAGTAAAGAATGG+GGG | 0.673182 | 5_3:-38858571 | Msa0810440:three_prime_UTR |
| CTAGATTTCCCAGTTCCTGG+AGG | 0.685154 | 5_3:+38862243 | None:intergenic |
| TATGATGAGTGTGAGTGTAG+GGG | 0.700365 | 5_3:+38862854 | None:intergenic |
| GCAGTATTGATATTCCTGAG+AGG | 0.713312 | 5_3:-38862080 | Msa0810440:CDS |
| ATTGATGAAGAACGAAGACG+CGG | 0.719308 | 5_3:-38858981 | Msa0810440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAATTTAATATT+TGG | + | chr5_3:38861109-38861128 | None:intergenic | 0.0% |
| !! | TATATTTGCATATTAAAAAA+TGG | - | chr5_3:38861449-38861468 | Msa0810440:intron | 10.0% |
| !! | TTTAATTAACAAACATAAAC+AGG | + | chr5_3:38859648-38859667 | None:intergenic | 15.0% |
| !! | TATGGTATGAAAAAATAAAT+AGG | + | chr5_3:38859757-38859776 | None:intergenic | 15.0% |
| !!! | ATTTTATAAATGCATTGATA+TGG | + | chr5_3:38859775-38859794 | None:intergenic | 15.0% |
| !! | ATAAATTATGACATGAAATT+AGG | - | chr5_3:38860120-38860139 | Msa0810440:intron | 15.0% |
| !! | TAAATAATATTGACGATTAA+GGG | + | chr5_3:38861384-38861403 | None:intergenic | 15.0% |
| !! | ATAAATAATATTGACGATTA+AGG | + | chr5_3:38861385-38861404 | None:intergenic | 15.0% |
| !! | TTAAATTGTATAAATATCCA+CGG | + | chr5_3:38861829-38861848 | None:intergenic | 15.0% |
| !!! | TTAATTGATTTCATTTTAGA+TGG | - | chr5_3:38862078-38862097 | Msa0810440:CDS | 15.0% |
| !!! | TAATTGATTTCATTTTAGAT+GGG | - | chr5_3:38862079-38862098 | Msa0810440:CDS | 15.0% |
| !!! | AAAATTGATTTCATTTTAGA+TGG | - | chr5_3:38862105-38862124 | Msa0810440:CDS | 15.0% |
| !!! | AAATTGATTTCATTTTAGAT+GGG | - | chr5_3:38862106-38862125 | Msa0810440:CDS | 15.0% |
| !!! | AAATTTTTTATCAGTAGCAA+TGG | - | chr5_3:38860006-38860025 | Msa0810440:intron | 20.0% |
| !! | ATTGAAAGTTCTCTTTAATT+TGG | - | chr5_3:38860193-38860212 | Msa0810440:intron | 20.0% |
| !! | CAATAATTGGTTAAGAAATT+TGG | - | chr5_3:38860851-38860870 | Msa0810440:intron | 20.0% |
| !!! | TTTTTGAAATTTTCCCATAT+CGG | - | chr5_3:38861541-38861560 | Msa0810440:intron | 20.0% |
| !!! | TTAACTTTATAGATGGATTA+TGG | - | chr5_3:38862304-38862323 | Msa0810440:CDS | 20.0% |
| !! | CTTTGAGAAAACATTATGTT+TGG | + | chr5_3:38858524-38858543 | None:intergenic | 25.0% |
| !!! | TTTTGAGTCTTTCATTTTCA+GGG | + | chr5_3:38858790-38858809 | None:intergenic | 25.0% |
| !!! | ATTTTGAGTCTTTCATTTTC+AGG | + | chr5_3:38858791-38858810 | None:intergenic | 25.0% |
| !!! | TAGTGAGTTTTTTCTCTTTT+GGG | + | chr5_3:38858823-38858842 | None:intergenic | 25.0% |
| !!! | ATAGTGAGTTTTTTCTCTTT+TGG | + | chr5_3:38858824-38858843 | None:intergenic | 25.0% |
| ! | AAGAGAAAAAACTCACTATT+CGG | - | chr5_3:38858825-38858844 | Msa0810440:CDS | 25.0% |
| ! | AAATTAACCGATATGTACAA+CGG | - | chr5_3:38858863-38858882 | Msa0810440:CDS | 25.0% |
| !!! | AAGTTTTCACAAAAAGTACA+AGG | - | chr5_3:38859000-38859019 | Msa0810440:CDS | 25.0% |
| !!! | TTAGCTTTATCAAGAATGAA+AGG | + | chr5_3:38859049-38859068 | None:intergenic | 25.0% |
| ! | ATGATAACATTCTTCATTTC+TGG | + | chr5_3:38859199-38859218 | None:intergenic | 25.0% |
| !!! | AGAGAGTTTTATAAGAAAGT+TGG | - | chr5_3:38859247-38859266 | Msa0810440:CDS | 25.0% |
| !!! | AGTTTTATAAGAAAGTTGGT+AGG | - | chr5_3:38859251-38859270 | Msa0810440:CDS | 25.0% |
| !!! | GTTTTATAAGAAAGTTGGTA+GGG | - | chr5_3:38859252-38859271 | Msa0810440:CDS | 25.0% |
| ! | GATATATTTGATCTTCAACT+TGG | - | chr5_3:38859361-38859380 | Msa0810440:intron | 25.0% |
| ! | TAAACAGCAAAATGATATAC+AGG | - | chr5_3:38859507-38859526 | Msa0810440:intron | 25.0% |
| ! | AGCATATTACTAGAATTTCT+AGG | + | chr5_3:38859604-38859623 | None:intergenic | 25.0% |
| !!! | CTAATTTTTTCACAACCAAT+TGG | - | chr5_3:38859728-38859747 | Msa0810440:intron | 25.0% |
| ! | AAAATAAATAGGTCTCCAAT+TGG | + | chr5_3:38859746-38859765 | None:intergenic | 25.0% |
| !!! | ATTTTTTTCTAGATCCACTA+AGG | + | chr5_3:38860091-38860110 | None:intergenic | 25.0% |
| !!! | GTTTTAGTTCTTGTTGATTT+TGG | - | chr5_3:38860148-38860167 | Msa0810440:intron | 25.0% |
| ! | AAGAAAAAGAATTCCAATTG+TGG | - | chr5_3:38860238-38860257 | Msa0810440:intron | 25.0% |
| !!! | CCAAAAAAATATGCCATTTT+AGG | + | chr5_3:38860304-38860323 | None:intergenic | 25.0% |
| !!! | CCTAAAATGGCATATTTTTT+TGG | - | chr5_3:38860301-38860320 | Msa0810440:intron | 25.0% |
| !!! | ACTTTCTCTCCTTTAATTTT+CGG | - | chr5_3:38860459-38860478 | Msa0810440:intron | 25.0% |
| ! | ACTAATTTCCCGAAAATTAA+AGG | + | chr5_3:38860471-38860490 | None:intergenic | 25.0% |
| ! | TTGTAATTTCTCTTCATTCA+AGG | + | chr5_3:38860534-38860553 | None:intergenic | 25.0% |
| ! | TTTAATATTTGGATACTCTC+CGG | + | chr5_3:38861098-38861117 | None:intergenic | 25.0% |
| !! | AACACTAACAATATTCCTTT+TGG | - | chr5_3:38861304-38861323 | Msa0810440:intron | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | + | chr5_3:38861528-38861547 | None:intergenic | 25.0% |
| ! | CTATGTATGTAAAACAGAAA+GGG | + | chr5_3:38861684-38861703 | None:intergenic | 25.0% |
| !! | ATAATAGAAGTTTTACACGA+AGG | + | chr5_3:38861779-38861798 | None:intergenic | 25.0% |
| ! | TTCGTGTAAAACTTCTATTA+TGG | - | chr5_3:38861778-38861797 | Msa0810440:intron | 25.0% |
| ! | TACAGTTACTCAAAAAGAAT+TGG | + | chr5_3:38862056-38862075 | None:intergenic | 25.0% |
| ! | TGTCCTTGAAATTATAATGT+TGG | - | chr5_3:38862183-38862202 | Msa0810440:CDS | 25.0% |
| !! | ATTTCTCATCTTGATTTTGA+TGG | - | chr5_3:38862252-38862271 | Msa0810440:CDS | 25.0% |
| ! | GGATTACTTAACTTTATAGA+TGG | - | chr5_3:38862297-38862316 | Msa0810440:CDS | 25.0% |
| !! | ATGTCTTATTGTTCTTATGA+AGG | - | chr5_3:38862429-38862448 | Msa0810440:CDS | 25.0% |
| !!! | AATTTTAGCTTCAAACTACT+TGG | - | chr5_3:38862458-38862477 | Msa0810440:CDS | 25.0% |
| !! | AACAAAAATGTTGCTTATCA+AGG | - | chr5_3:38862857-38862876 | Msa0810440:CDS | 25.0% |
| !! | TGTTGTAATCTTTTGCTAAT+AGG | - | chr5_3:38862899-38862918 | Msa0810440:CDS | 25.0% |
| !!! | AAAATAGTTCTAGTACAGTT+TGG | + | chr5_3:38862944-38862963 | None:intergenic | 25.0% |
| ! | TGATTATGAGAAGTAAAGAA+TGG | - | chr5_3:38862973-38862992 | Msa0810440:CDS | 25.0% |
| ! | GATTATGAGAAGTAAAGAAT+GGG | - | chr5_3:38862974-38862993 | Msa0810440:CDS | 25.0% |
| ! | ATTATGAGAAGTAAAGAATG+GGG | - | chr5_3:38862975-38862994 | Msa0810440:CDS | 25.0% |
| ! | TTTGAGTCTTTCATTTTCAG+GGG | + | chr5_3:38858789-38858808 | None:intergenic | 30.0% |
| ! | AAAGTACAAGGAAGTTGTTT+TGG | - | chr5_3:38859012-38859031 | Msa0810440:CDS | 30.0% |
| AACACTGCTTATTGTTATAG+TGG | - | chr5_3:38859112-38859131 | Msa0810440:CDS | 30.0% | |
| ATTGTTATAGTGGTGTGAAA+TGG | - | chr5_3:38859122-38859141 | Msa0810440:CDS | 30.0% | |
| TTGTTATAGTGGTGTGAAAT+GGG | - | chr5_3:38859123-38859142 | Msa0810440:CDS | 30.0% | |
| CAAGTGTTTCAAATGTTGAA+GGG | + | chr5_3:38859168-38859187 | None:intergenic | 30.0% | |
| ! | AACATTTGAAACACTTGCAA+TGG | - | chr5_3:38859171-38859190 | Msa0810440:CDS | 30.0% |
| !! | AAACGTGGTTATTTGTTGTA+TGG | - | chr5_3:38859280-38859299 | Msa0810440:intron | 30.0% |
| ! | TACTGCTAATAGGTCTATTT+TGG | - | chr5_3:38859426-38859445 | Msa0810440:intron | 30.0% |
| TCTTAGTGTAATAGTATGCT+TGG | + | chr5_3:38859895-38859914 | None:intergenic | 30.0% | |
| AGCAATGGAATTCAATATTC+CGG | - | chr5_3:38860021-38860040 | Msa0810440:intron | 30.0% | |
| AATAGCAAAGTGTGAGTTAT+TGG | - | chr5_3:38860278-38860297 | Msa0810440:intron | 30.0% | |
| !! | CTTTCTCTCCTTTAATTTTC+GGG | - | chr5_3:38860460-38860479 | Msa0810440:intron | 30.0% |
| TTTGCAATTTATCTGCATTC+AGG | - | chr5_3:38860683-38860702 | Msa0810440:intron | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | - | chr5_3:38860684-38860703 | Msa0810440:intron | 30.0% | |
| TGTGTGCAAGAGAAAATTAA+GGG | + | chr5_3:38860758-38860777 | None:intergenic | 30.0% | |
| TTGTGTGCAAGAGAAAATTA+AGG | + | chr5_3:38860759-38860778 | None:intergenic | 30.0% | |
| CTAACGTGTAGTTCAATAAT+TGG | - | chr5_3:38860838-38860857 | Msa0810440:intron | 30.0% | |
| ! | TGATGATGATATATGCCATA+GGG | + | chr5_3:38860949-38860968 | None:intergenic | 30.0% |
| !! | TTGATGATGATATATGCCAT+AGG | + | chr5_3:38860950-38860969 | None:intergenic | 30.0% |
| !!! | AGTACTGATGTGTTCTTTTT+TGG | - | chr5_3:38861268-38861287 | Msa0810440:intron | 30.0% |
| ATTAACAAACACAAGAAACC+AGG | + | chr5_3:38861430-38861449 | None:intergenic | 30.0% | |
| GCTATGTATGTAAAACAGAA+AGG | + | chr5_3:38861685-38861704 | None:intergenic | 30.0% | |
| ! | TGTTTTACATACATAGCAAG+AGG | - | chr5_3:38861688-38861707 | Msa0810440:intron | 30.0% |
| !! | CAAAGGTCTTTGTTATTGAA+TGG | - | chr5_3:38861733-38861752 | Msa0810440:intron | 30.0% |
| ! | TTTTCATCAAAGATATTCCG+TGG | - | chr5_3:38861809-38861828 | Msa0810440:intron | 30.0% |
| CGACCAACATTATAATTTCA+AGG | + | chr5_3:38862189-38862208 | None:intergenic | 30.0% | |
| TCCAAAGAAAGGATTATCAT+GGG | + | chr5_3:38862490-38862509 | None:intergenic | 30.0% | |
| ! | ACAACAATCTAAAAAGCGTA+AGG | - | chr5_3:38862674-38862693 | Msa0810440:CDS | 30.0% |
| ! | ATGTTGTTGTTACTCAAAGA+AGG | - | chr5_3:38862742-38862761 | Msa0810440:CDS | 30.0% |
| TTTGTAATTGTGTTCAGCTA+TGG | - | chr5_3:38862791-38862810 | Msa0810440:CDS | 30.0% | |
| TTATGAGAAGTAAAGAATGG+GGG | - | chr5_3:38862976-38862995 | Msa0810440:CDS | 30.0% | |
| TGTACTATTACATCACTAAG+TGG | - | chr5_3:38863019-38863038 | Msa0810440:CDS | 30.0% | |
| !! | TGTTTGGTTTGTCAAGTGAA+GGG | + | chr5_3:38858508-38858527 | None:intergenic | 35.0% |
| !! | ATGTTTGGTTTGTCAAGTGA+AGG | + | chr5_3:38858509-38858528 | None:intergenic | 35.0% |
| GAGAAAATTGTAGATGGTGA+AGG | + | chr5_3:38858554-38858573 | None:intergenic | 35.0% | |
| TAGGCTGAGAAAATTGTAGA+TGG | + | chr5_3:38858560-38858579 | None:intergenic | 35.0% | |
| CTCATCATAGAAGAATCAAC+AGG | - | chr5_3:38858707-38858726 | Msa0810440:three_prime_UTR | 35.0% | |
| CTCACTATTCGGTTAGAAAA+AGG | - | chr5_3:38858836-38858855 | Msa0810440:CDS | 35.0% | |
| AGGAAAACCGTTGTACATAT+CGG | + | chr5_3:38858873-38858892 | None:intergenic | 35.0% | |
| CAAATGAATCTCCATTTGAG+AGG | + | chr5_3:38858893-38858912 | None:intergenic | 35.0% | |
| GCAAGTGTTTCAAATGTTGA+AGG | + | chr5_3:38859169-38859188 | None:intergenic | 35.0% | |
| ! | ATCTAGTTTGATTGCTGCTA+TGG | - | chr5_3:38859321-38859340 | Msa0810440:intron | 35.0% |
| CAGCAAAATGATATACAGGT+TGG | - | chr5_3:38859511-38859530 | Msa0810440:intron | 35.0% | |
| GCAATGGAATTCAATATTCC+GGG | - | chr5_3:38860022-38860041 | Msa0810440:intron | 35.0% | |
| GTAAGTGAACTTGTAAATCC+CGG | + | chr5_3:38860043-38860062 | None:intergenic | 35.0% | |
| ACACAGTCATATTCCACAAT+TGG | + | chr5_3:38860254-38860273 | None:intergenic | 35.0% | |
| ! | TGTGAGTTATTGGCCTAAAA+TGG | - | chr5_3:38860288-38860307 | Msa0810440:intron | 35.0% |
| !!! | GGCATATTTTTTTGGTAGCT+AGG | - | chr5_3:38860309-38860328 | Msa0810440:intron | 35.0% |
| ! | TAGTCACTTTAGTCCTTGAA+TGG | - | chr5_3:38860487-38860506 | Msa0810440:intron | 35.0% |
| ! | AGTCACTTTAGTCCTTGAAT+GGG | - | chr5_3:38860488-38860507 | Msa0810440:intron | 35.0% |
| ACTAACGAAGTTTGCATTCA+GGG | - | chr5_3:38860623-38860642 | Msa0810440:intron | 35.0% | |
| ! | AGTCACTTTAGTCCTTGAAT+CGG | + | chr5_3:38860488-38860507 | None:intergenic | 35.0% |
| GTGTGCAAGAGAAAATTAAG+GGG | + | chr5_3:38860757-38860776 | None:intergenic | 35.0% | |
| ! | AATTTTCTCTTGCACACAAG+TGG | - | chr5_3:38860760-38860779 | Msa0810440:intron | 35.0% |
| TGAACTACACGTTAGTTCAA+TGG | + | chr5_3:38860833-38860852 | None:intergenic | 35.0% | |
| !! | TTCTCAAAAGCATTACCCTA+TGG | - | chr5_3:38860931-38860950 | Msa0810440:intron | 35.0% |
| !!! | TCATCCATTTTGAAGTATCG+GGG | + | chr5_3:38861016-38861035 | None:intergenic | 35.0% |
| !!! | GTCATCCATTTTGAAGTATC+GGG | + | chr5_3:38861017-38861036 | None:intergenic | 35.0% |
| !!! | CGTCATCCATTTTGAAGTAT+CGG | + | chr5_3:38861018-38861037 | None:intergenic | 35.0% |
| ! | AAGAGCACACTATATCCAAA+AGG | + | chr5_3:38861322-38861341 | None:intergenic | 35.0% |
| ! | TGGATATAGTGTGCTCTTTT+TGG | - | chr5_3:38861324-38861343 | Msa0810440:intron | 35.0% |
| AATATTGACGATTAAGGGAG+TGG | + | chr5_3:38861379-38861398 | None:intergenic | 35.0% | |
| ! | TATTGTCTAAAGCAATTGCG+TGG | + | chr5_3:38861634-38861653 | None:intergenic | 35.0% |
| !! | TTGACAATACTTGCTGTCAA+AGG | - | chr5_3:38861716-38861735 | Msa0810440:intron | 35.0% |
| !! | AGGTCTTTGTTATTGAATGG+TGG | - | chr5_3:38861736-38861755 | Msa0810440:intron | 35.0% |
| !! | CTCATCTTGATTTTGATGGA+TGG | - | chr5_3:38862256-38862275 | Msa0810440:CDS | 35.0% |
| CTGGATCTAATCTTTCTTTG+TGG | + | chr5_3:38862371-38862390 | None:intergenic | 35.0% | |
| ! | GATTAGATCCAGCACTTTTA+AGG | - | chr5_3:38862379-38862398 | Msa0810440:CDS | 35.0% |
| TCCCATGATAATCCTTTCTT+TGG | - | chr5_3:38862486-38862505 | Msa0810440:CDS | 35.0% | |
| CTCCAAAGAAAGGATTATCA+TGG | + | chr5_3:38862491-38862510 | None:intergenic | 35.0% | |
| TTCGTTCTTCATCAATTCCT+CGG | + | chr5_3:38862562-38862581 | None:intergenic | 35.0% | |
| ! | GATTTGTCAAGTTGTTGAAG+AGG | - | chr5_3:38862604-38862623 | Msa0810440:CDS | 35.0% |
| GTTGTTGAAGAGGAAGAAAA+TGG | - | chr5_3:38862614-38862633 | Msa0810440:CDS | 35.0% | |
| TTGAAGAGGAAGAAAATGGA+AGG | - | chr5_3:38862618-38862637 | Msa0810440:CDS | 35.0% | |
| ! | ACAATCTAAAAAGCGTAAGG+TGG | - | chr5_3:38862677-38862696 | Msa0810440:CDS | 35.0% |
| ! | ATGTTGCTTATCAAGGCTTA+AGG | - | chr5_3:38862864-38862883 | Msa0810440:CDS | 35.0% |
| !! | TTTGGTTTGTCAAGTGAAGG+GGG | + | chr5_3:38858506-38858525 | None:intergenic | 40.0% |
| !! | GTTTGGTTTGTCAAGTGAAG+GGG | + | chr5_3:38858507-38858526 | None:intergenic | 40.0% |
| !!! | AACGTGGTTTTATGAGGTAG+CGG | + | chr5_3:38858673-38858692 | None:intergenic | 40.0% |
| TATGATGAGTGTGAGTGTAG+GGG | + | chr5_3:38858696-38858715 | None:intergenic | 40.0% | |
| CTATGATGAGTGTGAGTGTA+GGG | + | chr5_3:38858697-38858716 | None:intergenic | 40.0% | |
| TCTATGATGAGTGTGAGTGT+AGG | + | chr5_3:38858698-38858717 | None:intergenic | 40.0% | |
| ! | ACAACGGTTTTCCTCTCAAA+TGG | - | chr5_3:38858879-38858898 | Msa0810440:CDS | 40.0% |
| GCTGAAACTGAGAAAAACAG+TGG | - | chr5_3:38858914-38858933 | Msa0810440:CDS | 40.0% | |
| !! | ATAAGAAAGTTGGTAGGGCT+TGG | - | chr5_3:38859257-38859276 | Msa0810440:CDS | 40.0% |
| !! | TATTTGTTGTATGGTCCTCC+AGG | - | chr5_3:38859289-38859308 | Msa0810440:intron | 40.0% |
| AAACTAGATTTCCCAGTTCC+TGG | + | chr5_3:38859310-38859329 | None:intergenic | 40.0% | |
| TGCTTCTTGCTACTGCTAAT+AGG | - | chr5_3:38859416-38859435 | Msa0810440:intron | 40.0% | |
| !! | GCAGTATTGATATTCCTGAG+AGG | - | chr5_3:38859467-38859486 | Msa0810440:intron | 40.0% |
| ! | GTATTGATATTCCTGAGAGG+AGG | - | chr5_3:38859470-38859489 | Msa0810440:intron | 40.0% |
| GTGTCAAGGTCTCAAACAAA+AGG | + | chr5_3:38860381-38860400 | None:intergenic | 40.0% | |
| ATTACAAAACAGTCCCTGCA+TGG | - | chr5_3:38860547-38860566 | Msa0810440:intron | 40.0% | |
| TCAGGGACTAAAGTGACTAA+CGG | - | chr5_3:38860576-38860595 | Msa0810440:intron | 40.0% | |
| ACTAACGGAGTCTACATTCA+TGG | - | chr5_3:38860591-38860610 | Msa0810440:intron | 40.0% | |
| GACTAACGAAGTTTGCATTC+AGG | - | chr5_3:38860622-38860641 | Msa0810440:intron | 40.0% | |
| ACACCCTGAATAGGTACATT+GGG | - | chr5_3:38860806-38860825 | Msa0810440:intron | 40.0% | |
| ! | TCACAGGTGAAATGGCATTT+TGG | + | chr5_3:38860991-38861010 | None:intergenic | 40.0% |
| ACACAAGTATCCGTGAGTAT+CGG | + | chr5_3:38861165-38861184 | None:intergenic | 40.0% | |
| AATCAAGATACGATACGGCT+GGG | + | chr5_3:38861523-38861542 | None:intergenic | 40.0% | |
| AAATCAAGATACGATACGGC+TGG | + | chr5_3:38861524-38861543 | None:intergenic | 40.0% | |
| ! | ATTGAATGGTGGAAACCTCA+TGG | - | chr5_3:38861747-38861766 | Msa0810440:intron | 40.0% |
| ! | TTGAATGGTGGAAACCTCAT+GGG | - | chr5_3:38861748-38861767 | Msa0810440:intron | 40.0% |
| !! | GATGGATTATGGTCAAGTTG+TGG | - | chr5_3:38862315-38862334 | Msa0810440:CDS | 40.0% |
| !!! | ACTTTTAAGGCCAGGAAGAA+TGG | - | chr5_3:38862392-38862411 | Msa0810440:CDS | 40.0% |
| CCTTCAATCTCTCCAAAGAA+AGG | + | chr5_3:38862501-38862520 | None:intergenic | 40.0% | |
| ! | CCTTTCTTTGGAGAGATTGA+AGG | - | chr5_3:38862498-38862517 | Msa0810440:CDS | 40.0% |
| ATTGATGAAGAACGAAGACG+CGG | - | chr5_3:38862566-38862585 | Msa0810440:CDS | 40.0% | |
| ! | TCTAAAAAGCGTAAGGTGGT+TGG | - | chr5_3:38862681-38862700 | Msa0810440:CDS | 40.0% |
| GTTACTCAAAGAAGGACAAG+AGG | - | chr5_3:38862750-38862769 | Msa0810440:CDS | 40.0% | |
| AGGACAAGAGGTTATAAGAG+AGG | - | chr5_3:38862762-38862781 | Msa0810440:CDS | 40.0% | |
| AGAAGCTGTCATGGATGCAT+AGG | + | chr5_3:38858579-38858598 | None:intergenic | 45.0% | |
| CAGCATGATAGAAGCTGTCA+TGG | + | chr5_3:38858588-38858607 | None:intergenic | 45.0% | |
| ! | TATCATGCTGCTTCGTTCCA+TGG | - | chr5_3:38858598-38858617 | Msa0810440:three_prime_UTR | 45.0% |
| TGGAATGAGTTCTTGTGCCA+TGG | + | chr5_3:38858618-38858637 | None:intergenic | 45.0% | |
| TTGTAAAGGTAGCCACGGAT+TGG | + | chr5_3:38858644-38858663 | None:intergenic | 45.0% | |
| ! | AGGTGTTGTAAAGGTAGCCA+CGG | + | chr5_3:38858649-38858668 | None:intergenic | 45.0% |
| !!! | TGGTTTTATGAGGTAGCGGA+AGG | + | chr5_3:38858669-38858688 | None:intergenic | 45.0% |
| !!! | TAGGGGAACGTGGTTTTATG+AGG | + | chr5_3:38858679-38858698 | None:intergenic | 45.0% |
| ACTCAGCTGCATCATAGACT+TGG | + | chr5_3:38858745-38858764 | None:intergenic | 45.0% | |
| ACCACTTGACTAGACCTTAG+TGG | - | chr5_3:38860074-38860093 | Msa0810440:intron | 45.0% | |
| TCCACTAAGGTCTAGTCAAG+TGG | + | chr5_3:38860078-38860097 | None:intergenic | 45.0% | |
| TGAATCAGAACCCACATGCT+AGG | + | chr5_3:38860340-38860359 | None:intergenic | 45.0% | |
| TTGAGACCTTGACACTTGAC+AGG | - | chr5_3:38860386-38860405 | Msa0810440:intron | 45.0% | |
| AGTGAACCTGTCAAGTGTCA+AGG | + | chr5_3:38860395-38860414 | None:intergenic | 45.0% | |
| CTTTAGTCCTTGAATGGGAG+AGG | - | chr5_3:38860493-38860512 | Msa0810440:intron | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | chr5_3:38860559-38860578 | Msa0810440:intron | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | chr5_3:38860563-38860582 | None:intergenic | 45.0% | |
| GACGAATCTCTTCCGATTCA+AGG | - | chr5_3:38860715-38860734 | Msa0810440:intron | 45.0% | |
| CACACCCTGAATAGGTACAT+TGG | - | chr5_3:38860805-38860824 | Msa0810440:intron | 45.0% | |
| GGTCCCAATGTACCTATTCA+GGG | + | chr5_3:38860812-38860831 | None:intergenic | 45.0% | |
| TGGTCCCAATGTACCTATTC+AGG | + | chr5_3:38860813-38860832 | None:intergenic | 45.0% | |
| GAAGCCCCGATACTTCAAAA+TGG | - | chr5_3:38861009-38861028 | Msa0810440:intron | 45.0% | |
| !! | GATACGTATCGGGAAGTATC+GGG | + | chr5_3:38861076-38861095 | None:intergenic | 45.0% |
| ! | GGATACGTATCGGGAAGTAT+CGG | + | chr5_3:38861077-38861096 | None:intergenic | 45.0% |
| GATACTTCCCGATACGTATC+CGG | - | chr5_3:38861076-38861095 | Msa0810440:intron | 45.0% | |
| ATACTCTCCGGATACGTATC+GGG | + | chr5_3:38861086-38861105 | None:intergenic | 45.0% | |
| GATACTCTCCGGATACGTAT+CGG | + | chr5_3:38861087-38861106 | None:intergenic | 45.0% | |
| ! | CGGGACGTATCTGAAAGTAT+CGG | + | chr5_3:38861145-38861164 | None:intergenic | 45.0% |
| CACAAGTATCCGTGAGTATC+GGG | + | chr5_3:38861164-38861183 | None:intergenic | 45.0% | |
| ATGTTAATGTGCTACGAGCC+TGG | - | chr5_3:38861409-38861428 | Msa0810440:intron | 45.0% | |
| TCCGTATCGTATCTCGTATC+CGG | - | chr5_3:38861584-38861603 | Msa0810440:intron | 45.0% | |
| TAGTGAAATGCTGTGAAGCC+CGG | + | chr5_3:38861606-38861625 | None:intergenic | 45.0% | |
| !! | ACACTAGCTTGCTCTTGAAG+GGG | + | chr5_3:38862001-38862020 | None:intergenic | 45.0% |
| !! | CACACTAGCTTGCTCTTGAA+GGG | + | chr5_3:38862002-38862021 | None:intergenic | 45.0% |
| !! | TCACACTAGCTTGCTCTTGA+AGG | + | chr5_3:38862003-38862022 | None:intergenic | 45.0% |
| ATGTGCATGTCCATTCTTCC+TGG | + | chr5_3:38862405-38862424 | None:intergenic | 45.0% | |
| GTTGGTTGCAAGCAAAAACG+AGG | - | chr5_3:38862699-38862718 | Msa0810440:CDS | 45.0% | |
| CTCATTCCACAACCAATCCG+TGG | - | chr5_3:38858629-38858648 | Msa0810440:three_prime_UTR | 50.0% | |
| !! | GGTAGCGGAAGGTGTTGTAA+AGG | + | chr5_3:38858658-38858677 | None:intergenic | 50.0% |
| TTGTATGGTCCTCCAGGAAC+TGG | - | chr5_3:38859295-38859314 | Msa0810440:intron | 50.0% | |
| TGTATGGTCCTCCAGGAACT+GGG | - | chr5_3:38859296-38859315 | Msa0810440:intron | 50.0% | |
| CTAGATTTCCCAGTTCCTGG+AGG | + | chr5_3:38859307-38859326 | None:intergenic | 50.0% | |
| GATATTCCTGAGAGGAGGCA+TGG | - | chr5_3:38859475-38859494 | Msa0810440:intron | 50.0% | |
| GACGAATCCTCTCCCATTCA+AGG | + | chr5_3:38860503-38860522 | None:intergenic | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | chr5_3:38860558-38860577 | Msa0810440:intron | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | + | chr5_3:38860564-38860583 | None:intergenic | 50.0% | |
| CCTATTCAGGGTGTGTGCTA+TGG | + | chr5_3:38860800-38860819 | None:intergenic | 50.0% | |
| CCATAGCACACACCCTGAAT+AGG | - | chr5_3:38860797-38860816 | Msa0810440:intron | 50.0% | |
| !! | TTGAAGTATCGGGGCTTCAC+AGG | + | chr5_3:38861007-38861026 | None:intergenic | 50.0% |
| CAGATACGTCCCGATACTCA+CGG | - | chr5_3:38861152-38861171 | Msa0810440:intron | 50.0% | |
| ! | CTGCACTGATACGCCGATAT+GGG | + | chr5_3:38861557-38861576 | None:intergenic | 50.0% |
| ! | ACTGCACTGATACGCCGATA+TGG | + | chr5_3:38861558-38861577 | None:intergenic | 50.0% |
| CCCGGATACGAGATACGATA+CGG | + | chr5_3:38861588-38861607 | None:intergenic | 50.0% | |
| CCGTATCGTATCTCGTATCC+GGG | - | chr5_3:38861585-38861604 | Msa0810440:intron | 50.0% | |
| ACACGAAGGATCATCCCATG+AGG | + | chr5_3:38861765-38861784 | None:intergenic | 50.0% | |
| TGGATGCAGTTGACGCTATC+TGG | - | chr5_3:38862276-38862295 | Msa0810440:CDS | 50.0% | |
| !!! | GATCCAGCACTTTTAAGGCC+AGG | - | chr5_3:38862384-38862403 | Msa0810440:CDS | 50.0% |
| !! | CTTCCTGGCCTTAAAAGTGC+TGG | + | chr5_3:38862390-38862409 | None:intergenic | 50.0% |
| AATTCCTCGGCAACTTGTGC+AGG | + | chr5_3:38862549-38862568 | None:intergenic | 50.0% | |
| GGTTGCAAGCAAAAACGAGG+TGG | - | chr5_3:38862702-38862721 | Msa0810440:CDS | 50.0% | |
| TGCAAGCAAAAACGAGGTGG+TGG | - | chr5_3:38862705-38862724 | Msa0810440:CDS | 50.0% | |
| GCAAGCAAAAACGAGGTGGT+GGG | - | chr5_3:38862706-38862725 | Msa0810440:CDS | 50.0% | |
| !! | AGGTAGCCACGGATTGGTTG+TGG | + | chr5_3:38858638-38858657 | None:intergenic | 55.0% |
| AGTGTGAGTGTAGGGGAACG+TGG | + | chr5_3:38858689-38858708 | None:intergenic | 55.0% | |
| ! | GTTGGTAGGGCTTGGAAACG+TGG | - | chr5_3:38859265-38859284 | Msa0810440:CDS | 55.0% |
| CTAGGCCTAGCCTAGCATGT+GGG | - | chr5_3:38860327-38860346 | Msa0810440:intron | 55.0% | |
| CAGAACCCACATGCTAGGCT+AGG | + | chr5_3:38860335-38860354 | None:intergenic | 55.0% | |
| TCGGGGCTTCACAGGTGAAA+TGG | + | chr5_3:38860999-38861018 | None:intergenic | 55.0% | |
| !! | GGGAAGTATCGGGCAGGTAT+CGG | + | chr5_3:38861066-38861085 | None:intergenic | 55.0% |
| AACACCTGCACAAGTTGCCG+AGG | - | chr5_3:38862542-38862561 | Msa0810440:CDS | 55.0% | |
| GATGAAGAACGAAGACGCGG+AGG | - | chr5_3:38862569-38862588 | Msa0810440:CDS | 55.0% | |
| CCTTCTCCATGCCTCCTCTC+AGG | + | chr5_3:38859484-38859503 | None:intergenic | 60.0% | |
| ! | CCTGAGAGGAGGCATGGAGA+AGG | - | chr5_3:38859481-38859500 | Msa0810440:intron | 60.0% |
| GCTAGGCCTAGCCTAGCATG+TGG | - | chr5_3:38860326-38860345 | Msa0810440:intron | 60.0% | |
| !! | GGTATCGGTGCAGGATACGC+AGG | + | chr5_3:38861051-38861070 | None:intergenic | 60.0% |
| !! | TATCGGGCAGGTATCGGTGC+AGG | + | chr5_3:38861060-38861079 | None:intergenic | 60.0% |
| !! | CGTATCGGGAAGTATCGGGC+AGG | + | chr5_3:38861072-38861091 | None:intergenic | 60.0% |
| GACGCGGAGGCGACGCTCGA+AGG | - | chr5_3:38862582-38862601 | Msa0810440:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 38858460 | 38863109 | 38858460 | ID=Msa0810440;Name=Msa0810440 |
| chr5_3 | mRNA | 38858460 | 38863109 | 38858460 | ID=Msa0810440-mRNA-1;Parent=Msa0810440;Name=Msa0810440-mRNA-1;_AED=0.07;_eAED=0.07;_QI=70|1|1|1|1|1|2|312|503 |
| chr5_3 | exon | 38858460 | 38859284 | 38858460 | ID=Msa0810440-mRNA-1:exon:11814;Parent=Msa0810440-mRNA-1 |
| chr5_3 | exon | 38862041 | 38863109 | 38862041 | ID=Msa0810440-mRNA-1:exon:11813;Parent=Msa0810440-mRNA-1 |
| chr5_3 | five_prime_UTR | 38863040 | 38863109 | 38863040 | ID=Msa0810440-mRNA-1:five_prime_utr;Parent=Msa0810440-mRNA-1 |
| chr5_3 | CDS | 38862041 | 38863039 | 38862041 | ID=Msa0810440-mRNA-1:cds;Parent=Msa0810440-mRNA-1 |
| chr5_3 | CDS | 38858772 | 38859284 | 38858772 | ID=Msa0810440-mRNA-1:cds;Parent=Msa0810440-mRNA-1 |
| chr5_3 | three_prime_UTR | 38858460 | 38858771 | 38858460 | ID=Msa0810440-mRNA-1:three_prime_utr;Parent=Msa0810440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
