Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761250 | XP_013453689.1 | 97.724 | 659 | 7 | 3 | 1 | 652 | 1 | 658 | 0.0 | 1335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761250 | sp|Q9T074|PCKA1_ARATH | 82.609 | 667 | 97 | 7 | 2 | 652 | 8 | 671 | 0.0 | 1132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761250 | G7KF50 | 97.724 | 659 | 7 | 3 | 1 | 652 | 1 | 658 | 0.0 | 1335 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0059880 | Msa0761250 | 0.808536 | 2.952144e-50 | -8.615850e-47 |
| Msa0720660 | Msa0761250 | 0.929363 | 7.734518e-93 | -8.615850e-47 |
| Msa0761250 | Msa0803560 | 0.878287 | 3.172044e-69 | -8.615850e-47 |
| Msa0761250 | Msa0841800 | 0.892452 | 1.566328e-74 | -8.615850e-47 |
| Msa0761250 | Msa0883610 | 0.805491 | 1.301303e-49 | -8.615850e-47 |
| Msa0761250 | Msa0985250 | 0.811259 | 7.656002e-51 | -8.615850e-47 |
| Msa0761250 | Msa0985290 | 0.802678 | 5.004812e-49 | -8.615850e-47 |
| Msa0761250 | Msa1064930 | 0.802217 | 6.231070e-49 | -8.615850e-47 |
| Msa0150910 | Msa0761250 | 0.811007 | 8.684020e-51 | -8.615850e-47 |
| Msa0378390 | Msa0761250 | 0.832701 | 8.133372e-56 | -8.615850e-47 |
| Msa0427740 | Msa0761250 | 0.833973 | 3.919280e-56 | -8.615850e-47 |
| Msa0427970 | Msa0761250 | 0.840923 | 6.489653e-58 | -8.615850e-47 |
| Msa0518570 | Msa0761250 | 0.833972 | 3.922126e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761250 | MtrunA17_Chr5g0411471 | 97.724 | 659 | 7 | 3 | 1 | 652 | 1 | 658 | 0.0 | 1335 |
| Msa0761250 | MtrunA17_Chr8g0366821 | 84.711 | 641 | 82 | 7 | 22 | 652 | 13 | 647 | 0.0 | 1090 |
| Msa0761250 | MtrunA17_Chr3g0141011 | 80.670 | 657 | 108 | 6 | 14 | 652 | 26 | 681 | 0.0 | 1083 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761250 | AT4G37870.1 | 82.609 | 667 | 97 | 7 | 2 | 652 | 8 | 671 | 0.0 | 1132 |
| Msa0761250 | AT5G65690.1 | 77.533 | 681 | 113 | 8 | 1 | 652 | 1 | 670 | 0.0 | 1083 |
| Msa0761250 | AT5G65690.4 | 77.533 | 681 | 113 | 8 | 1 | 652 | 1 | 670 | 0.0 | 1083 |
| Msa0761250 | AT5G65690.2 | 74.157 | 712 | 113 | 9 | 1 | 652 | 1 | 701 | 0.0 | 1068 |
| Msa0761250 | AT5G65690.3 | 77.778 | 576 | 89 | 7 | 1 | 547 | 1 | 566 | 0.0 | 926 |
Find 195 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTGAAGTTGCAGTTTC+TGG | 0.137217 | 5_2:+18342276 | None:intergenic |
| GGAGCAATGGCAACACTTTC+TGG | 0.186986 | 5_2:-18340310 | Msa0761250:CDS |
| GGCGATGTTGCTCTCTTCTT+TGG | 0.196899 | 5_2:-18338151 | Msa0761250:CDS |
| CCTGAAGAGCTGGAGAATTT+TGG | 0.219791 | 5_2:-18338403 | Msa0761250:CDS |
| ACCTTCACCAACTACAAAAT+TGG | 0.225091 | 5_2:-18336153 | Msa0761250:CDS |
| GCCAAAAGAATAACATTCTT+TGG | 0.240576 | 5_2:+18336952 | None:intergenic |
| CCAAAATTCTCCAGCTCTTC+AGG | 0.242891 | 5_2:+18338403 | None:intergenic |
| CTTACACTCTGGTTCCAATA+TGG | 0.243790 | 5_2:-18338182 | Msa0761250:CDS |
| TCCAAAGAATGTTATTCTTT+TGG | 0.252662 | 5_2:-18336953 | Msa0761250:CDS |
| CATCATTATTGCACTTCTTA+TGG | 0.257353 | 5_2:-18343055 | Msa0761250:five_prime_UTR |
| CTGATATCTGGAATGCAATT+AGG | 0.263491 | 5_2:-18337806 | Msa0761250:CDS |
| ATCGCCACCTTTGCCCATAT+TGG | 0.267671 | 5_2:+18338168 | None:intergenic |
| ACGGTTACATGGAAACTTTC+CGG | 0.288544 | 5_2:+18338354 | None:intergenic |
| TGAACGACCAATTCTTGAAT+TGG | 0.290588 | 5_2:-18338753 | Msa0761250:CDS |
| CTGACTTTGATTCTGTTCTC+TGG | 0.294165 | 5_2:+18338727 | None:intergenic |
| GGATCTCCCTTCACCACCTT+TGG | 0.308079 | 5_2:+18340937 | None:intergenic |
| GGAGTTGAAGTTCCTGTATT+AGG | 0.311899 | 5_2:+18342326 | None:intergenic |
| CAACCAACCAATATATTATA+AGG | 0.312697 | 5_2:+18336014 | None:intergenic |
| AGTTGATTACTTGAATTCTT+TGG | 0.317106 | 5_2:-18339880 | Msa0761250:CDS |
| GTAAATTATGATCAACCTTC+TGG | 0.327850 | 5_2:+18340905 | None:intergenic |
| TTGATCTTAATCTTGCTAGA+AGG | 0.332635 | 5_2:-18338300 | Msa0761250:CDS |
| ATTGCTTCACTTCAAAAGAT+TGG | 0.333898 | 5_2:+18336087 | None:intergenic |
| TATTCTGATAAATCAGTTAC+AGG | 0.344858 | 5_2:-18337607 | Msa0761250:intron |
| CTGGATCCCAATTCAAGAAT+TGG | 0.347042 | 5_2:+18338746 | None:intergenic |
| ACTTAGTTTGATGCGATTCC+CGG | 0.347489 | 5_2:+18336486 | None:intergenic |
| CTAATTGCATTCCAGATATC+AGG | 0.350357 | 5_2:+18337807 | None:intergenic |
| ACACATGGTAACTTTGCATT+TGG | 0.355254 | 5_2:+18336985 | None:intergenic |
| CTTATAATATATTGGTTGGT+TGG | 0.355641 | 5_2:-18336013 | Msa0761250:three_prime_UTR |
| AGGATGTTGCTGAGAAAATC+TGG | 0.363492 | 5_2:+18342985 | None:intergenic |
| AATGTGGCCTTATAATATAT+TGG | 0.376190 | 5_2:-18336021 | Msa0761250:three_prime_UTR |
| GCTCTCTTCTTTGGACTCTC+AGG | 0.378934 | 5_2:-18338142 | Msa0761250:intron |
| TTATAATATATTGGTTGGTT+GGG | 0.384637 | 5_2:-18336012 | Msa0761250:three_prime_UTR |
| GGGAGAAAGAGCCTGATATC+TGG | 0.386458 | 5_2:-18337818 | Msa0761250:CDS |
| TTAGCAAATTGTTCGTGATA+AGG | 0.386606 | 5_2:+18335790 | None:intergenic |
| TAGAGACAAGCGTGTGGTTA+AGG | 0.386634 | 5_2:-18340266 | Msa0761250:CDS |
| TATTTGTATACTACAATATG+AGG | 0.388752 | 5_2:+18335880 | None:intergenic |
| GGATAACTAACCGCATTGAT+AGG | 0.392059 | 5_2:+18336337 | None:intergenic |
| ATCTGGAATGCAATTAGGTT+TGG | 0.396803 | 5_2:-18337801 | Msa0761250:CDS |
| ATGGAGAGCCATGGTGCAAC+AGG | 0.406887 | 5_2:-18336643 | Msa0761250:CDS |
| TAATCTTGCTAGAAGGGAAA+TGG | 0.408462 | 5_2:-18338293 | Msa0761250:CDS |
| ATATATTGGTTGGTTGGGTC+AGG | 0.410932 | 5_2:-18336007 | Msa0761250:three_prime_UTR |
| GATCATAATAGATATTTGAT+TGG | 0.411882 | 5_2:-18337921 | Msa0761250:CDS |
| AGATATCAGGCTCTTTCTCC+CGG | 0.413843 | 5_2:+18337820 | None:intergenic |
| TTCTCCAGCTCTTCAGGACT+GGG | 0.416723 | 5_2:+18338409 | None:intergenic |
| TGGTACTGAGGATGGTATAA+AGG | 0.419919 | 5_2:-18336752 | Msa0761250:CDS |
| CAGTATATCCACTGATGAAA+TGG | 0.420627 | 5_2:+18336869 | None:intergenic |
| TCAACCTTCTGGCTCTTGGC+TGG | 0.425374 | 5_2:+18340916 | None:intergenic |
| ATGATCAACCTTCTGGCTCT+TGG | 0.426037 | 5_2:+18340912 | None:intergenic |
| AACTGCAACTTCAATCAATT+AGG | 0.428100 | 5_2:-18342271 | Msa0761250:intron |
| TCCTCATCCATCTCAATGTT+AGG | 0.429129 | 5_2:+18339930 | None:intergenic |
| ATGTAATGTGAAAGACAAAT+AGG | 0.432576 | 5_2:+18343075 | None:intergenic |
| GTTCCTGTATTAGGTGTAGA+AGG | 0.436750 | 5_2:+18342335 | None:intergenic |
| AAGTGTTGCCATTGCTCCAT+TGG | 0.439666 | 5_2:+18340315 | None:intergenic |
| ATTCTCCAGCTCTTCAGGAC+TGG | 0.443936 | 5_2:+18338408 | None:intergenic |
| TTACACTCTGGTTCCAATAT+GGG | 0.446622 | 5_2:-18338181 | Msa0761250:CDS |
| CAACAGAGAACGGGAGCAAC+GGG | 0.448119 | 5_2:-18342475 | Msa0761250:CDS |
| TTGGAGATGATGAACATTGT+TGG | 0.450977 | 5_2:-18337902 | Msa0761250:CDS |
| GAACGACCAATTCTTGAATT+GGG | 0.451977 | 5_2:-18338752 | Msa0761250:CDS |
| CAAGCGTGTGGTTAAGGATA+AGG | 0.452105 | 5_2:-18340260 | Msa0761250:CDS |
| AGCATTGCAGCATACTTTGT+AGG | 0.462291 | 5_2:+18336676 | None:intergenic |
| CTCTACAATCTCTCCCCAGC+TGG | 0.470396 | 5_2:-18340817 | Msa0761250:intron |
| TATTCACAATGGAAGCCTCC+TGG | 0.470980 | 5_2:-18336440 | Msa0761250:CDS |
| TACTGAAAATGAACTTTGGT+GGG | 0.472517 | 5_2:-18340236 | Msa0761250:CDS |
| ACATATGAATTACACTCATT+CGG | 0.475963 | 5_2:+18335932 | None:intergenic |
| TCCTCGGCACACAGTACGCC+GGG | 0.476619 | 5_2:-18338267 | Msa0761250:CDS |
| GATGGATGAGGAGACTTTCA+TGG | 0.477834 | 5_2:-18339919 | Msa0761250:CDS |
| TATGTAGGTGGCTGGTACTG+AGG | 0.482389 | 5_2:-18336764 | Msa0761250:intron |
| GGACACCCTCTACTTCAGTT+GGG | 0.483575 | 5_2:+18336377 | None:intergenic |
| ATTCACAATGGAAGCCTCCT+GGG | 0.488020 | 5_2:-18336439 | Msa0761250:CDS |
| AATGGTACATGGTCTGCGCC+AGG | 0.489790 | 5_2:+18336887 | None:intergenic |
| CTAAATGCATCGATCTCTCC+CGG | 0.489864 | 5_2:-18337839 | Msa0761250:CDS |
| ACACTGGTTGGTCCGGTGGC+AGG | 0.490211 | 5_2:-18336609 | Msa0761250:intron |
| CATATTGGAACCAGAGTGTA+AGG | 0.491290 | 5_2:+18338183 | None:intergenic |
| CAATGCGACATTGTTGAAGC+TGG | 0.493313 | 5_2:-18336202 | Msa0761250:CDS |
| GAAGTGTTGCAACAGAGAAC+GGG | 0.493568 | 5_2:-18342484 | Msa0761250:CDS |
| CTACTTCAGTTGGGGTCTGA+AGG | 0.499246 | 5_2:+18336386 | None:intergenic |
| ACATCCTAGCTACAATTCCT+TGG | 0.499252 | 5_2:-18342969 | Msa0761250:intron |
| AAGACCTTTCTTCATTTCCC+CGG | 0.500559 | 5_2:+18338249 | None:intergenic |
| AAGGAGAGAATTTGACGCTT+AGG | 0.500625 | 5_2:+18338202 | None:intergenic |
| ACGACACAGAAAAGTGTGAA+TGG | 0.501173 | 5_2:-18342440 | Msa0761250:CDS |
| AATTAATGCAGCTATGGTAC+CGG | 0.503007 | 5_2:-18336505 | Msa0761250:intron |
| TGATCTTAATCTTGCTAGAA+GGG | 0.503025 | 5_2:-18338299 | Msa0761250:CDS |
| CTTGTTAACACTGGTTGGTC+CGG | 0.504922 | 5_2:-18336616 | Msa0761250:CDS |
| ACACTTTCTGGTGCCAAGAC+AGG | 0.508621 | 5_2:-18340298 | Msa0761250:CDS |
| AGAATAACATTCTTTGGATG+AGG | 0.511311 | 5_2:+18336958 | None:intergenic |
| GCATTTGGTATGTACTCTAT+CGG | 0.512324 | 5_2:+18337000 | None:intergenic |
| TGATCAGAGAGAGTAGCAAA+TGG | 0.515175 | 5_2:+18342305 | None:intergenic |
| CATCAGTGGATATACTGCTC+TGG | 0.515676 | 5_2:-18336863 | Msa0761250:intron |
| CCGACCCAGTCCTGAAGAGC+TGG | 0.516317 | 5_2:-18338413 | Msa0761250:CDS |
| CGACACAGAAAAGTGTGAAT+GGG | 0.516432 | 5_2:-18342439 | Msa0761250:CDS |
| GCATTGCAGCATACTTTGTA+GGG | 0.518322 | 5_2:+18336677 | None:intergenic |
| ACAGAAGAGATTCTTGCAGC+TGG | 0.519195 | 5_2:-18336111 | Msa0761250:CDS |
| CTTTCATGGTGAATAGAGAA+AGG | 0.519639 | 5_2:-18339905 | Msa0761250:CDS |
| TCTAGGAGAACGACCTGTCT+TGG | 0.522767 | 5_2:+18340285 | None:intergenic |
| TGCAATGCTTGCTGAAAAGA+TGG | 0.522791 | 5_2:-18336662 | Msa0761250:CDS |
| GCATCATTGACAAGAGAAAG+TGG | 0.524765 | 5_2:-18340961 | Msa0761250:CDS |
| TTACTGAAAATGAACTTTGG+TGG | 0.525635 | 5_2:-18340237 | Msa0761250:CDS |
| ACCAACTACAAAATTGGAAA+GGG | 0.529142 | 5_2:-18336147 | Msa0761250:CDS |
| TGGTGTAGAACTATATGAGC+AGG | 0.531503 | 5_2:-18340371 | Msa0761250:intron |
| AAGTGGACCAAAGGTGGTGA+AGG | 0.532921 | 5_2:-18340944 | Msa0761250:CDS |
| TAGTGAGTGAAACGGTTACA+TGG | 0.534817 | 5_2:+18338343 | None:intergenic |
| TTAACCACACGCTTGTCTCT+AGG | 0.537668 | 5_2:+18340268 | None:intergenic |
| GCACCTTCTACACCTAATAC+AGG | 0.542170 | 5_2:-18342338 | Msa0761250:CDS |
| TGTGAAAGACAAATAGGTGA+TGG | 0.545611 | 5_2:+18343081 | None:intergenic |
| GCATTGTATATAGTGAAGTC+CGG | 0.545860 | 5_2:+18338376 | None:intergenic |
| GGGGACTAGGATTGTTAGGG+TGG | 0.547684 | 5_2:-18336051 | Msa0761250:three_prime_UTR |
| AATGCAATTAGGTTTGGTAC+AGG | 0.548007 | 5_2:-18337795 | Msa0761250:intron |
| GGGACACCCTCTACTTCAGT+TGG | 0.548012 | 5_2:+18336376 | None:intergenic |
| GGATCATTCATCACTTCCAA+TGG | 0.548370 | 5_2:-18340331 | Msa0761250:CDS |
| TGAAGCAATGTTGTGTTGTG+TGG | 0.551497 | 5_2:-18336073 | Msa0761250:three_prime_UTR |
| GAACATTGTTGGAGTGAGAA+TGG | 0.551621 | 5_2:-18337891 | Msa0761250:CDS |
| ATTATTGATGCTATTCACAA+TGG | 0.551643 | 5_2:-18336451 | Msa0761250:CDS |
| GCAACAGAGAACGGGAGCAA+CGG | 0.552813 | 5_2:-18342476 | Msa0761250:CDS |
| GGAAGTGTTGCAACAGAGAA+CGG | 0.555230 | 5_2:-18342485 | Msa0761250:CDS |
| GACTTCACTATATACAATGC+CGG | 0.556176 | 5_2:-18338373 | Msa0761250:CDS |
| CGAACCAAGGAATTGTAGCT+AGG | 0.557818 | 5_2:+18342965 | None:intergenic |
| AAAATGGCATCAAACGGAAA+CGG | 0.558552 | 5_2:-18342506 | Msa0761250:CDS |
| CACCAACTACAAAATTGGAA+AGG | 0.562306 | 5_2:-18336148 | Msa0761250:CDS |
| TTTCATGGTGAATAGAGAAA+GGG | 0.563156 | 5_2:-18339904 | Msa0761250:CDS |
| AGGTTACTGAAAATGAACTT+TGG | 0.564008 | 5_2:-18340240 | Msa0761250:CDS |
| CAAATTCTCTCCTTACACTC+TGG | 0.566178 | 5_2:-18338193 | Msa0761250:CDS |
| GGGATTTGTCACGATGATAG+TGG | 0.568344 | 5_2:-18342419 | Msa0761250:CDS |
| GTTAACACTGGTTGGTCCGG+TGG | 0.568391 | 5_2:-18336613 | Msa0761250:CDS |
| GATATCAGGCTCTTTCTCCC+GGG | 0.569948 | 5_2:+18337821 | None:intergenic |
| AAGTGAGTATAGTACCAGCT+GGG | 0.575051 | 5_2:+18340803 | None:intergenic |
| CAGGCGATAAAGTATGAGAA+AGG | 0.575852 | 5_2:-18340352 | Msa0761250:CDS |
| GGGTTCTCCTAACATTGAGA+TGG | 0.576526 | 5_2:-18339937 | Msa0761250:CDS |
| GAAGCAATGTTGTGTTGTGT+GGG | 0.576675 | 5_2:-18336072 | Msa0761250:three_prime_UTR |
| TGTTGTGCATGAACAATGAA+TGG | 0.579766 | 5_2:+18338683 | None:intergenic |
| ATAGGATCAAGAATTTCTGA+AGG | 0.581378 | 5_2:+18336355 | None:intergenic |
| TCAGACCCCAACTGAAGTAG+AGG | 0.582028 | 5_2:-18336383 | Msa0761250:CDS |
| TCCTAACATTGAGATGGATG+AGG | 0.583346 | 5_2:-18339931 | Msa0761250:CDS |
| ATGTCATGTAGTGAGTGAAA+CGG | 0.587227 | 5_2:+18338335 | None:intergenic |
| TGGCCTTATAATATATTGGT+TGG | 0.587877 | 5_2:-18336017 | Msa0761250:three_prime_UTR |
| CATCACTTCCAATGGAGCAA+TGG | 0.588910 | 5_2:-18340323 | Msa0761250:CDS |
| ACTGAAAATGAACTTTGGTG+GGG | 0.589502 | 5_2:-18340235 | Msa0761250:CDS |
| GAACAATGAATGGTATGCTC+TGG | 0.589973 | 5_2:+18338693 | None:intergenic |
| GACAAGAGAAAGTGGACCAA+AGG | 0.590224 | 5_2:-18340953 | Msa0761250:CDS |
| TTACTTGAATTCTTTGGACA+AGG | 0.593969 | 5_2:-18339874 | Msa0761250:intron |
| AATGCAAAGTTACCATGTGT+TGG | 0.595409 | 5_2:-18336982 | Msa0761250:CDS |
| ATTAATGCAGCTATGGTACC+GGG | 0.596656 | 5_2:-18336504 | Msa0761250:intron |
| TGGTATGTACTCTATCGGAT+AGG | 0.597196 | 5_2:+18337005 | None:intergenic |
| AGAAGGGAAATGGTTATCCT+CGG | 0.598433 | 5_2:-18338283 | Msa0761250:CDS |
| GATGGCTTGTTAACACTGGT+TGG | 0.601864 | 5_2:-18336621 | Msa0761250:CDS |
| ATAACAACCACCTTCAATGT+TGG | 0.603993 | 5_2:+18337863 | None:intergenic |
| GGTTCCAATATGGGCAAAGG+TGG | 0.607153 | 5_2:-18338172 | Msa0761250:CDS |
| TTCACAATGGAAGCCTCCTG+GGG | 0.607871 | 5_2:-18336438 | Msa0761250:CDS |
| ATGGTACATGGTCTGCGCCA+GGG | 0.609620 | 5_2:+18336888 | None:intergenic |
| TACGCCGGGGAAATGAAGAA+AGG | 0.609823 | 5_2:-18338253 | Msa0761250:CDS |
| TCCACTGATGAAATGGTACA+TGG | 0.610146 | 5_2:+18336876 | None:intergenic |
| CCCCGGCGTACTGTGTGCCG+AGG | 0.610936 | 5_2:+18338266 | None:intergenic |
| CCAGCTCTTCAGGACTGGGT+CGG | 0.611651 | 5_2:+18338413 | None:intergenic |
| GACACCCTCTACTTCAGTTG+GGG | 0.614848 | 5_2:+18336378 | None:intergenic |
| ATTATGATCAGTAGAAAGAG+TGG | 0.616425 | 5_2:+18337935 | None:intergenic |
| AGTGGACCAAAGGTGGTGAA+GGG | 0.616458 | 5_2:-18340943 | Msa0761250:CDS |
| AAGATTAAGATCAATGCTAG+TGG | 0.617025 | 5_2:+18338309 | None:intergenic |
| TCTGGTTCCAATATGGGCAA+AGG | 0.620236 | 5_2:-18338175 | Msa0761250:CDS |
| TTTGGATGAGGTCCAACACA+TGG | 0.620676 | 5_2:+18336970 | None:intergenic |
| AGAGCCATGGTGCAACAGGA+TGG | 0.624139 | 5_2:-18336639 | Msa0761250:CDS |
| TAAATGCATCGATCTCTCCC+GGG | 0.625176 | 5_2:-18337838 | Msa0761250:CDS |
| ATCCTCGGCACACAGTACGC+CGG | 0.626445 | 5_2:-18338268 | Msa0761250:CDS |
| ACCATGTACCATTTCATCAG+TGG | 0.627912 | 5_2:-18336877 | Msa0761250:CDS |
| CTGTCACTAACAGCAATGGT+TGG | 0.629050 | 5_2:+18340862 | None:intergenic |
| GCCAGGGTTAGCTTACTCAC+AGG | 0.631139 | 5_2:+18336904 | None:intergenic |
| AAGAGAAAGTGGACCAAAGG+TGG | 0.633631 | 5_2:-18340950 | Msa0761250:CDS |
| AGCAATGTTGTGTTGTGTGG+GGG | 0.635883 | 5_2:-18336070 | Msa0761250:three_prime_UTR |
| AGATCCAGCCAAGAGCCAGA+AGG | 0.636098 | 5_2:-18340920 | Msa0761250:CDS |
| AATGCGACATTGTTGAAGCT+GGG | 0.637634 | 5_2:-18336201 | Msa0761250:CDS |
| AATGGTGTCTCCAACATTGA+AGG | 0.637962 | 5_2:-18337873 | Msa0761250:CDS |
| CTAACAGCAATGGTTGGAGT+AGG | 0.638608 | 5_2:+18340868 | None:intergenic |
| ACTAAAAGCATACCTGCCAC+CGG | 0.640253 | 5_2:+18336597 | None:intergenic |
| AGCACTGTCACTAACAGCAA+TGG | 0.640876 | 5_2:+18340858 | None:intergenic |
| AGAAAGCTAAAGAGAAACGA+AGG | 0.645233 | 5_2:+18343014 | None:intergenic |
| TAGGTGGCTGGTACTGAGGA+TGG | 0.645802 | 5_2:-18336760 | Msa0761250:CDS |
| TTAGGGTGGTAGAATAAATG+TGG | 0.650810 | 5_2:-18336037 | Msa0761250:three_prime_UTR |
| TAGGATCAAGAATTTCTGAA+GGG | 0.654771 | 5_2:+18336356 | None:intergenic |
| ACCTGTGAGTAAGCTAACCC+TGG | 0.655761 | 5_2:-18336905 | Msa0761250:CDS |
| CAAGCTGAAAATGTTGCTTG+TGG | 0.656547 | 5_2:+18336727 | None:intergenic |
| CAAGCCATCCTGTTGCACCA+TGG | 0.664526 | 5_2:+18336635 | None:intergenic |
| GCGACATTGTTGAAGCTGGG+TGG | 0.666561 | 5_2:-18336198 | Msa0761250:CDS |
| ATTGTCAGTGTTGGAAAACG+TGG | 0.669949 | 5_2:-18337659 | Msa0761250:intron |
| AAGCAATGTTGTGTTGTGTG+GGG | 0.670355 | 5_2:-18336071 | Msa0761250:three_prime_UTR |
| CAGACCCCAACTGAAGTAGA+GGG | 0.670526 | 5_2:-18336382 | Msa0761250:CDS |
| AGTGAGTATAGTACCAGCTG+GGG | 0.682225 | 5_2:+18340804 | None:intergenic |
| ACAGGATGGCTTGTTAACAC+TGG | 0.686381 | 5_2:-18336625 | Msa0761250:CDS |
| TTGGAGTAGGAACATGATGG+TGG | 0.693055 | 5_2:+18340881 | None:intergenic |
| CTGCAAGAATCTCTTCTGTG+AGG | 0.694213 | 5_2:+18336115 | None:intergenic |
| AGGGTTAGCTTACTCACAGG+TGG | 0.703538 | 5_2:+18336907 | None:intergenic |
| GGTGTCTCCAACATTGAAGG+TGG | 0.709321 | 5_2:-18337870 | Msa0761250:CDS |
| GCTGAAAAGATGGAGAGCCA+TGG | 0.710111 | 5_2:-18336652 | Msa0761250:CDS |
| AATTCTTGATCCTATCAATG+CGG | 0.731649 | 5_2:-18336347 | Msa0761250:intron |
| TCACAATGGAAGCCTCCTGG+GGG | 0.734115 | 5_2:-18336437 | Msa0761250:CDS |
| TTCTCCTAGAGACAAGCGTG+TGG | 0.745257 | 5_2:-18340272 | Msa0761250:CDS |
| TGGTTGGAGTAGGAACATGA+TGG | 0.745342 | 5_2:+18340878 | None:intergenic |
| CCTCGGCACACAGTACGCCG+GGG | 0.764331 | 5_2:-18338266 | Msa0761250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTATTTTTTATTTTT+TGG | - | chr5_2:18337821-18337840 | Msa0761250:CDS | 0.0% |
| !! | ATTAATTATTTATTGCAAAT+CGG | - | chr5_2:18337399-18337418 | Msa0761250:intron | 10.0% |
| !!! | TTTTTTAAAATAAATTTTCC+AGG | + | chr5_2:18337680-18337699 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTATTTTTTGG+TGG | - | chr5_2:18337824-18337843 | Msa0761250:CDS | 10.0% |
| !! | AAAAGTAAAAATTTAACTAA+GGG | + | chr5_2:18338118-18338137 | None:intergenic | 10.0% |
| !! | AAAAAGTAAAAATTTAACTA+AGG | + | chr5_2:18338119-18338138 | None:intergenic | 10.0% |
| !!! | ACTTTTTTGATTTTTTTATT+TGG | - | chr5_2:18338132-18338151 | Msa0761250:intron | 10.0% |
| !! | CAAATTATTTATAAATTCAT+TGG | - | chr5_2:18339697-18339716 | Msa0761250:intron | 10.0% |
| !!! | TTTCTTATTTTTTTTGAAAT+AGG | - | chr5_2:18340913-18340932 | Msa0761250:CDS | 10.0% |
| !!! | GTGATATAATTTATTTTTTT+TGG | + | chr5_2:18343043-18343062 | None:intergenic | 10.0% |
| !! | AAAGTTAAAAAAAAAAATGA+GGG | + | chr5_2:18343071-18343090 | None:intergenic | 10.0% |
| !! | TAAAGTTAAAAAAAAAAATG+AGG | + | chr5_2:18343072-18343091 | None:intergenic | 10.0% |
| !! | TATTCATATCCATAAAAAAT+GGG | - | chr5_2:18336687-18336706 | Msa0761250:CDS | 15.0% |
| !! | AATTAAAGTCAAATAAATGT+AGG | + | chr5_2:18336778-18336797 | None:intergenic | 15.0% |
| !! | TAAATCAGAAATTATTTATG+TGG | - | chr5_2:18336907-18336926 | Msa0761250:CDS | 15.0% |
| !! | AAATCAGAAATTATTTATGT+GGG | - | chr5_2:18336908-18336927 | Msa0761250:CDS | 15.0% |
| !!! | ATTTGAGTTATTTTTTTTGA+AGG | + | chr5_2:18336964-18336983 | None:intergenic | 15.0% |
| !! | AAACTATAATTAAGTTAGAA+GGG | + | chr5_2:18337192-18337211 | None:intergenic | 15.0% |
| !!! | AATACCTTTTTAATAGAAAA+AGG | - | chr5_2:18337317-18337336 | Msa0761250:intron | 15.0% |
| !!! | ATACCTTTTTAATAGAAAAA+GGG | - | chr5_2:18337318-18337337 | Msa0761250:intron | 15.0% |
| !!! | TAAATATTTTAATAAATGCC+TGG | - | chr5_2:18337659-18337678 | Msa0761250:intron | 15.0% |
| !!! | TTTCAAATAAATTTGTTAGA+GGG | + | chr5_2:18338248-18338267 | None:intergenic | 15.0% |
| !!! | ATTTCAAATAAATTTGTTAG+AGG | + | chr5_2:18338249-18338268 | None:intergenic | 15.0% |
| !! | AAAATAAAATAAAAGAAGAG+AGG | + | chr5_2:18339042-18339061 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTAGTATAGATA+TGG | - | chr5_2:18339389-18339408 | Msa0761250:intron | 15.0% |
| !!! | TTGTATTTTAGTATAGATAT+GGG | - | chr5_2:18339390-18339409 | Msa0761250:intron | 15.0% |
| !!! | GTAATTATTTTCTTAAAGAA+TGG | + | chr5_2:18339475-18339494 | None:intergenic | 15.0% |
| !!! | TTTTTGTTGAAAGATTATTT+AGG | - | chr5_2:18339734-18339753 | Msa0761250:intron | 15.0% |
| !!! | TTAGTTCCATTTTATAATTA+AGG | - | chr5_2:18339791-18339810 | Msa0761250:intron | 15.0% |
| !!! | TAGTTCCATTTTATAATTAA+GGG | - | chr5_2:18339792-18339811 | Msa0761250:intron | 15.0% |
| !! | TAATACTGAAATTTATTGTA+AGG | + | chr5_2:18339924-18339943 | None:intergenic | 15.0% |
| !!! | TCATTTTCTTATAATTCTAA+TGG | - | chr5_2:18340883-18340902 | Msa0761250:CDS | 15.0% |
| !!! | TGTTTTGAAAAATATATACA+CGG | + | chr5_2:18341169-18341188 | None:intergenic | 15.0% |
| !! | ATTTAATTAAGATGAGTATT+TGG | - | chr5_2:18341311-18341330 | Msa0761250:intron | 15.0% |
| !! | AATCTATATATTATTGTGAA+AGG | - | chr5_2:18341508-18341527 | Msa0761250:intron | 15.0% |
| !!! | ATTTTATAAAAGTGCACTTA+GGG | - | chr5_2:18336213-18336232 | Msa0761250:CDS | 20.0% |
| !! | GTATTCATATCCATAAAAAA+TGG | - | chr5_2:18336686-18336705 | Msa0761250:CDS | 20.0% |
| !! | ATTCATATCCATAAAAAATG+GGG | - | chr5_2:18336688-18336707 | Msa0761250:CDS | 20.0% |
| !! | GAAACTATAATTAAGTTAGA+AGG | + | chr5_2:18337193-18337212 | None:intergenic | 20.0% |
| !!! | TTTTGATAAGACATATGAAA+TGG | - | chr5_2:18337784-18337803 | Msa0761250:intron | 20.0% |
| !!! | GTAGTAGATACATTTTATTA+AGG | + | chr5_2:18338421-18338440 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTTCTGTTTTGTT+TGG | - | chr5_2:18338485-18338504 | Msa0761250:intron | 20.0% |
| !! | AAATAGTATAATAACCAATG+AGG | + | chr5_2:18338886-18338905 | None:intergenic | 20.0% |
| !!! | TGCAAATTTTGTAAATTGTA+GGG | - | chr5_2:18338924-18338943 | Msa0761250:intron | 20.0% |
| !!! | TTATATCATCACATCTTTTT+TGG | + | chr5_2:18339066-18339085 | None:intergenic | 20.0% |
| !! | TTAAGATAATGACATAGAAA+TGG | - | chr5_2:18339243-18339262 | Msa0761250:intron | 20.0% |
| !! | ATAATATTGTGTCAGATAAA+GGG | + | chr5_2:18339306-18339325 | None:intergenic | 20.0% |
| !!! | TGTATTTTAGTATAGATATG+GGG | - | chr5_2:18339391-18339410 | Msa0761250:intron | 20.0% |
| !! | TTAAACTAATTCATTCCAAT+TGG | - | chr5_2:18339866-18339885 | Msa0761250:intron | 20.0% |
| !!! | ATTTTTTTTGAAATAGGTAC+TGG | - | chr5_2:18340919-18340938 | Msa0761250:CDS | 20.0% |
| !! | GATCATAATAGATATTTGAT+TGG | - | chr5_2:18340961-18340980 | Msa0761250:CDS | 20.0% |
| !!! | CTCTTAATTCTTTTGTTTAA+TGG | - | chr5_2:18341337-18341356 | Msa0761250:intron | 20.0% |
| !! | TTATATAATTGAAGCAACAT+TGG | + | chr5_2:18342085-18342104 | None:intergenic | 20.0% |
| !!! | AATTCTAACCATTTTTATGT+AGG | - | chr5_2:18342103-18342122 | Msa0761250:intron | 20.0% |
| !!! | TTAATAATTTGTGTGTTTGA+TGG | - | chr5_2:18342630-18342649 | Msa0761250:intron | 20.0% |
| !!! | TTATAATATATTGGTTGGTT+GGG | - | chr5_2:18342870-18342889 | Msa0761250:intron | 20.0% |
| !! | TATTTGTATACTACAATATG+AGG | + | chr5_2:18343005-18343024 | None:intergenic | 20.0% |
| ! | ATGTAATGTGAAAGACAAAT+AGG | + | chr5_2:18335810-18335829 | None:intergenic | 25.0% |
| !! | TGTTTTCTTTACATGTAGTT+TGG | - | chr5_2:18335969-18335988 | Msa0761250:three_prime_UTR | 25.0% |
| !! | AGTGCACTTTTATAAAATCA+CGG | + | chr5_2:18336211-18336230 | None:intergenic | 25.0% |
| !!! | GATTTTATAAAAGTGCACTT+AGG | - | chr5_2:18336212-18336231 | Msa0761250:CDS | 25.0% |
| !!! | ATTGTTTTTGCATTTACAGT+GGG | + | chr5_2:18336490-18336509 | None:intergenic | 25.0% |
| !!! | AATTGTTTTTGCATTTACAG+TGG | + | chr5_2:18336491-18336510 | None:intergenic | 25.0% |
| !!! | ATAATACTCCCCATTTTTTA+TGG | + | chr5_2:18336699-18336718 | None:intergenic | 25.0% |
| !!! | ATAAAAAATGGGGAGTATTA+TGG | - | chr5_2:18336698-18336717 | Msa0761250:CDS | 25.0% |
| !! | CTTCCCTTTTTCTATTAAAA+AGG | + | chr5_2:18337324-18337343 | None:intergenic | 25.0% |
| !! | CCAAAAATATCGATCTTTTA+AGG | + | chr5_2:18337716-18337735 | None:intergenic | 25.0% |
| !! | CCTTAAAAGATCGATATTTT+TGG | - | chr5_2:18337713-18337732 | Msa0761250:intron | 25.0% |
| ! | AGTAAAAATTTAACTAAGGG+AGG | + | chr5_2:18338115-18338134 | None:intergenic | 25.0% |
| ! | ATGTATCTACTACGTATAAT+TGG | - | chr5_2:18338428-18338447 | Msa0761250:intron | 25.0% |
| !!! | TTTTCTGTTTTGTTTGGATT+TGG | - | chr5_2:18338491-18338510 | Msa0761250:intron | 25.0% |
| ! | AATTGAAAGATAGAGATAGA+AGG | + | chr5_2:18338710-18338729 | None:intergenic | 25.0% |
| ! | TTCAATGTAATCATATGCAT+CGG | + | chr5_2:18338807-18338826 | None:intergenic | 25.0% |
| !! | GTGCAAATTTTGTAAATTGT+AGG | - | chr5_2:18338923-18338942 | Msa0761250:intron | 25.0% |
| !! | GCAAATTTTGTAAATTGTAG+GGG | - | chr5_2:18338925-18338944 | Msa0761250:intron | 25.0% |
| ! | AGTTGATTACTTGAATTCTT+TGG | - | chr5_2:18339002-18339021 | Msa0761250:intron | 25.0% |
| ! | GATAATATTGTGTCAGATAA+AGG | + | chr5_2:18339307-18339326 | None:intergenic | 25.0% |
| !! | AAATGTCATTTACTTGCAAA+AGG | - | chr5_2:18339338-18339357 | Msa0761250:intron | 25.0% |
| !! | TATTTTCTTAAAGAATGGTG+TGG | + | chr5_2:18339470-18339489 | None:intergenic | 25.0% |
| ! | AAGATAAATAACTGAGACAA+AGG | + | chr5_2:18339659-18339678 | None:intergenic | 25.0% |
| !! | TTCCATTTTATAATTAAGGG+TGG | - | chr5_2:18339795-18339814 | Msa0761250:intron | 25.0% |
| ! | TCAGTATTATAATGTCATCT+TGG | - | chr5_2:18339935-18339954 | Msa0761250:CDS | 25.0% |
| ! | TTATATCGAACAAAATTTCG+AGG | + | chr5_2:18339991-18340010 | None:intergenic | 25.0% |
| !!! | TCGACTATTTTTACATACTT+GGG | + | chr5_2:18340425-18340444 | None:intergenic | 25.0% |
| !!! | ATCGACTATTTTTACATACT+TGG | + | chr5_2:18340426-18340445 | None:intergenic | 25.0% |
| ! | ATGTAAAAATAGTCGATAAC+TGG | - | chr5_2:18340429-18340448 | Msa0761250:intron | 25.0% |
| ! | TGTAAAAATAGTCGATAACT+GGG | - | chr5_2:18340430-18340449 | Msa0761250:intron | 25.0% |
| ! | TTGAAAAATATATACACGGT+TGG | + | chr5_2:18341165-18341184 | None:intergenic | 25.0% |
| ! | TATTCTGATAAATCAGTTAC+AGG | - | chr5_2:18341275-18341294 | Msa0761250:intron | 25.0% |
| ! | AATATAAACCTCCTGTAATA+CGG | - | chr5_2:18341545-18341564 | Msa0761250:intron | 25.0% |
| !! | TCCAAAGAATGTTATTCTTT+TGG | - | chr5_2:18341929-18341948 | Msa0761250:intron | 25.0% |
| ! | ATTATTGATGCTATTCACAA+TGG | - | chr5_2:18342431-18342450 | Msa0761250:CDS | 25.0% |
| !!! | AATGTGGCCTTATAATATAT+TGG | - | chr5_2:18342861-18342880 | Msa0761250:intron | 25.0% |
| ! | CAACCAACCAATATATTATA+AGG | + | chr5_2:18342871-18342890 | None:intergenic | 25.0% |
| !! | CTTATAATATATTGGTTGGT+TGG | - | chr5_2:18342869-18342888 | Msa0761250:intron | 25.0% |
| ! | ACATATGAATTACACTCATT+CGG | + | chr5_2:18342953-18342972 | None:intergenic | 25.0% |
| CATCATTATTGCACTTCTTA+TGG | - | chr5_2:18335827-18335846 | Msa0761250:three_prime_UTR | 30.0% | |
| AAAATAAACAGAACGAACCA+AGG | + | chr5_2:18335933-18335952 | None:intergenic | 30.0% | |
| ATCCAGTGTGTTTGATATTA+CGG | - | chr5_2:18335993-18336012 | Msa0761250:three_prime_UTR | 30.0% | |
| TTGTTCTGCAGAGAAAAAAA+TGG | - | chr5_2:18336360-18336379 | Msa0761250:CDS | 30.0% | |
| GAGAAAAAAATGGCATCAAA+CGG | - | chr5_2:18336370-18336389 | Msa0761250:CDS | 30.0% | |
| AACTGCAACTTCAATCAATT+AGG | - | chr5_2:18336611-18336630 | Msa0761250:CDS | 30.0% | |
| ATTATGGTCATGTGAAAAAG+TGG | - | chr5_2:18336714-18336733 | Msa0761250:CDS | 30.0% | |
| TTAAGTCAATTGAAGACTAG+CGG | - | chr5_2:18337424-18337443 | Msa0761250:intron | 30.0% | |
| GTAAATTATGATCAACCTTC+TGG | + | chr5_2:18337980-18337999 | None:intergenic | 30.0% | |
| AGGTTACTGAAAATGAACTT+TGG | - | chr5_2:18338642-18338661 | Msa0761250:intron | 30.0% | |
| TTACTGAAAATGAACTTTGG+TGG | - | chr5_2:18338645-18338664 | Msa0761250:intron | 30.0% | |
| TACTGAAAATGAACTTTGGT+GGG | - | chr5_2:18338646-18338665 | Msa0761250:intron | 30.0% | |
| TTACGAGAACATATACTCTT+AGG | - | chr5_2:18338740-18338759 | Msa0761250:CDS | 30.0% | |
| TTTCATGGTGAATAGAGAAA+GGG | - | chr5_2:18338978-18338997 | Msa0761250:intron | 30.0% | |
| TTACTTGAATTCTTTGGACA+AGG | - | chr5_2:18339008-18339027 | Msa0761250:intron | 30.0% | |
| CATCACTTTCACACAAAAAA+TGG | - | chr5_2:18339142-18339161 | Msa0761250:intron | 30.0% | |
| TATGTGTCTCATTCATTTCA+TGG | - | chr5_2:18339217-18339236 | Msa0761250:intron | 30.0% | |
| TCACTTAGCAATATGCAAAA+TGG | + | chr5_2:18339430-18339449 | None:intergenic | 30.0% | |
| !!! | AGAGCTAGATGCTTTTTTAA+TGG | + | chr5_2:18339635-18339654 | None:intergenic | 30.0% |
| AGCCACCCTTAATTATAAAA+TGG | + | chr5_2:18339800-18339819 | None:intergenic | 30.0% | |
| !!! | GAAGTGGACTAATTTCATTT+TGG | - | chr5_2:18339827-18339846 | Msa0761250:intron | 30.0% |
| AATTGCCAACACTATTTGTT+TGG | - | chr5_2:18340254-18340273 | Msa0761250:CDS | 30.0% | |
| AGAAACCAAACAAATAGTGT+TGG | + | chr5_2:18340262-18340281 | None:intergenic | 30.0% | |
| TTTGTTCCTTGAAGACAAAA+AGG | - | chr5_2:18340284-18340303 | Msa0761250:CDS | 30.0% | |
| AACGATATAGGATACTTATC+TGG | + | chr5_2:18340327-18340346 | None:intergenic | 30.0% | |
| TATAAGGCTTTCAACGATAT+AGG | + | chr5_2:18340339-18340358 | None:intergenic | 30.0% | |
| AAGATTAAGATCAATGCTAG+TGG | + | chr5_2:18340576-18340595 | None:intergenic | 30.0% | |
| TTGATCTTAATCTTGCTAGA+AGG | - | chr5_2:18340582-18340601 | Msa0761250:intron | 30.0% | |
| TGATCTTAATCTTGCTAGAA+GGG | - | chr5_2:18340583-18340602 | Msa0761250:intron | 30.0% | |
| GTATATATCTAGTGGAGTAT+AGG | + | chr5_2:18340832-18340851 | None:intergenic | 30.0% | |
| ATGGCTAAGTATATATCTAG+TGG | + | chr5_2:18340840-18340859 | None:intergenic | 30.0% | |
| ACTAGATATATACTTAGCCA+TGG | - | chr5_2:18340839-18340858 | Msa0761250:CDS | 30.0% | |
| TTAGCCATGGATATTAGTTA+TGG | - | chr5_2:18340852-18340871 | Msa0761250:CDS | 30.0% | |
| AAAGCCATAACTAATATCCA+TGG | + | chr5_2:18340859-18340878 | None:intergenic | 30.0% | |
| ATTATGATCAGTAGAAAGAG+TGG | + | chr5_2:18340950-18340969 | None:intergenic | 30.0% | |
| ! | ATGGTTGACTTCATCAAATT+TGG | - | chr5_2:18341356-18341375 | Msa0761250:intron | 30.0% |
| TATTCAATAGCTGACAAAAG+AGG | - | chr5_2:18341406-18341425 | Msa0761250:intron | 30.0% | |
| CATATGAAGTACAACTTGTA+AGG | + | chr5_2:18341480-18341499 | None:intergenic | 30.0% | |
| AGAATAACATTCTTTGGATG+AGG | + | chr5_2:18341927-18341946 | None:intergenic | 30.0% | |
| GCCAAAAGAATAACATTCTT+TGG | + | chr5_2:18341933-18341952 | None:intergenic | 30.0% | |
| !! | TCTAACCATTTTTATGTAGG+TGG | - | chr5_2:18342106-18342125 | Msa0761250:intron | 30.0% |
| ATGTCAAATTAATGCAGCTA+TGG | - | chr5_2:18342371-18342390 | Msa0761250:CDS | 30.0% | |
| ! | TACAAGAAGAGTGAGATTTT+TGG | - | chr5_2:18342473-18342492 | Msa0761250:CDS | 30.0% |
| TAGGATCAAGAATTTCTGAA+GGG | + | chr5_2:18342529-18342548 | None:intergenic | 30.0% | |
| ATAGGATCAAGAATTTCTGA+AGG | + | chr5_2:18342530-18342549 | None:intergenic | 30.0% | |
| AATTCTTGATCCTATCAATG+CGG | - | chr5_2:18342535-18342554 | Msa0761250:intron | 30.0% | |
| ! | GTGAATAAACGAACTGTTTT+AGG | + | chr5_2:18342569-18342588 | None:intergenic | 30.0% |
| ACCAACTACAAAATTGGAAA+GGG | - | chr5_2:18342735-18342754 | Msa0761250:intron | 30.0% | |
| ATTGCTTCACTTCAAAAGAT+TGG | + | chr5_2:18342798-18342817 | None:intergenic | 30.0% | |
| !! | TGGCCTTATAATATATTGGT+TGG | - | chr5_2:18342865-18342884 | Msa0761250:intron | 30.0% |
| AGAAAGCTAAAGAGAAACGA+AGG | + | chr5_2:18335871-18335890 | None:intergenic | 35.0% | |
| TACGGTGAATTTGTCAATTG+TGG | - | chr5_2:18336011-18336030 | Msa0761250:three_prime_UTR | 35.0% | |
| !! | TGTTTGCATGTTTGCTATCA+CGG | + | chr5_2:18336051-18336070 | None:intergenic | 35.0% |
| ACAGTATTTATGTGTCAGTG+TGG | + | chr5_2:18336090-18336109 | None:intergenic | 35.0% | |
| ! | GCACTTTTATAAAATCACGG+TGG | + | chr5_2:18336208-18336227 | None:intergenic | 35.0% |
| GAATCTTTGATCTTGAACCA+TGG | - | chr5_2:18336269-18336288 | Msa0761250:intron | 35.0% | |
| !! | GCTTTGTTTGAAACTTTCCA+TGG | + | chr5_2:18336289-18336308 | None:intergenic | 35.0% |
| AAAATGGCATCAAACGGAAA+CGG | - | chr5_2:18336376-18336395 | Msa0761250:CDS | 35.0% | |
| ! | CTTTTCTGTGTCGTGATTTT+TGG | + | chr5_2:18336436-18336455 | None:intergenic | 35.0% |
| TTGATTGAAGTTGCAGTTTC+TGG | + | chr5_2:18336609-18336628 | None:intergenic | 35.0% | |
| CATGTGAAAAAGTGGTAAAG+CGG | - | chr5_2:18336722-18336741 | Msa0761250:CDS | 35.0% | |
| ! | TTTTAGTAGACTCAACTGAG+TGG | + | chr5_2:18337270-18337289 | None:intergenic | 35.0% |
| TCTCATCAGTTTCTTAGTCA+AGG | + | chr5_2:18337505-18337524 | None:intergenic | 35.0% | |
| TGACTAAGAAACTGATGAGA+TGG | - | chr5_2:18337505-18337524 | Msa0761250:intron | 35.0% | |
| TGTACATGTAGTGTACGAAA+TGG | - | chr5_2:18338210-18338229 | Msa0761250:CDS | 35.0% | |
| ACTGAAAATGAACTTTGGTG+GGG | - | chr5_2:18338647-18338666 | Msa0761250:intron | 35.0% | |
| GGGAAAGTAAGTACATACTT+TGG | - | chr5_2:18338667-18338686 | Msa0761250:intron | 35.0% | |
| CTTTCATGGTGAATAGAGAA+AGG | - | chr5_2:18338977-18338996 | Msa0761250:intron | 35.0% | |
| !!! | ATGTTGTCATTTTGCACAAG+TGG | - | chr5_2:18339269-18339288 | Msa0761250:intron | 35.0% |
| !!! | TGTTGTCATTTTGCACAAGT+GGG | - | chr5_2:18339270-18339289 | Msa0761250:intron | 35.0% |
| ! | TGCGTTTTCTAATGACTTTG+CGG | - | chr5_2:18339363-18339382 | Msa0761250:intron | 35.0% |
| TCTTAAAGAATGGTGTGGAA+TGG | + | chr5_2:18339465-18339484 | None:intergenic | 35.0% | |
| !!! | GCTAGATGCTTTTTTAATGG+AGG | + | chr5_2:18339632-18339651 | None:intergenic | 35.0% |
| TCATTCCAATTGGACATGTT+TGG | - | chr5_2:18339876-18339895 | Msa0761250:CDS | 35.0% | |
| CATTCCAATTGGACATGTTT+GGG | - | chr5_2:18339877-18339896 | Msa0761250:CDS | 35.0% | |
| TGAACGACCAATTCTTGAAT+TGG | - | chr5_2:18340129-18340148 | Msa0761250:intron | 35.0% | |
| GAACGACCAATTCTTGAATT+GGG | - | chr5_2:18340130-18340149 | Msa0761250:intron | 35.0% | |
| TGTTGTGCATGAACAATGAA+TGG | + | chr5_2:18340202-18340221 | None:intergenic | 35.0% | |
| TTCCTTGAAGACAAAAAGGT+AGG | - | chr5_2:18340288-18340307 | Msa0761250:CDS | 35.0% | |
| GATATAGGATACTTATCTGG+TGG | + | chr5_2:18340324-18340343 | None:intergenic | 35.0% | |
| AAAATAGTCGATAACTGGGT+TGG | - | chr5_2:18340434-18340453 | Msa0761250:intron | 35.0% | |
| GCATTGTATATAGTGAAGTC+CGG | + | chr5_2:18340509-18340528 | None:intergenic | 35.0% | |
| GACTTCACTATATACAATGC+CGG | - | chr5_2:18340509-18340528 | Msa0761250:intron | 35.0% | |
| ATGTCATGTAGTGAGTGAAA+CGG | + | chr5_2:18340550-18340569 | None:intergenic | 35.0% | |
| TAATCTTGCTAGAAGGGAAA+TGG | - | chr5_2:18340589-18340608 | Msa0761250:intron | 35.0% | |
| ! | TTACACTCTGGTTCCAATAT+GGG | - | chr5_2:18340701-18340720 | Msa0761250:intron | 35.0% |
| CTCAGGTATAGTATTCAATG+TGG | - | chr5_2:18340757-18340776 | Msa0761250:intron | 35.0% | |
| TTGGAGATGATGAACATTGT+TGG | - | chr5_2:18340980-18340999 | Msa0761250:intron | 35.0% | |
| ATAACAACCACCTTCAATGT+TGG | + | chr5_2:18341022-18341041 | None:intergenic | 35.0% | |
| CTAATTGCATTCCAGATATC+AGG | + | chr5_2:18341078-18341097 | None:intergenic | 35.0% | |
| ! | CTGATATCTGGAATGCAATT+AGG | - | chr5_2:18341076-18341095 | Msa0761250:intron | 35.0% |
| ! | ATCTGGAATGCAATTAGGTT+TGG | - | chr5_2:18341081-18341100 | Msa0761250:intron | 35.0% |
| ! | AATGCAATTAGGTTTGGTAC+AGG | - | chr5_2:18341087-18341106 | Msa0761250:intron | 35.0% |
| !! | GGTTTTGTACATGACTAAGA+TGG | - | chr5_2:18341377-18341396 | Msa0761250:intron | 35.0% |
| GTACGAAGTCAACTGTTAAT+TGG | + | chr5_2:18341455-18341474 | None:intergenic | 35.0% | |
| TATCCATAATGCCGTATTAC+AGG | + | chr5_2:18341559-18341578 | None:intergenic | 35.0% | |
| TGTAATACGGCATTATGGAT+AGG | - | chr5_2:18341558-18341577 | Msa0761250:intron | 35.0% | |
| ! | TTATGGATAGGAGTATAGGA+CGG | - | chr5_2:18341570-18341589 | Msa0761250:intron | 35.0% |
| CAATGAAAAAATTCAGCAGC+TGG | + | chr5_2:18341655-18341674 | None:intergenic | 35.0% | |
| TCTCAACTGATAGTTACATG+TGG | - | chr5_2:18341824-18341843 | Msa0761250:intron | 35.0% | |
| GCATTTGGTATGTACTCTAT+CGG | + | chr5_2:18341885-18341904 | None:intergenic | 35.0% | |
| ACACATGGTAACTTTGCATT+TGG | + | chr5_2:18341900-18341919 | None:intergenic | 35.0% | |
| AATGCAAAGTTACCATGTGT+TGG | - | chr5_2:18341900-18341919 | Msa0761250:intron | 35.0% | |
| CAGTATATCCACTGATGAAA+TGG | + | chr5_2:18342016-18342035 | None:intergenic | 35.0% | |
| !! | GCAACATTTTCAGCTTGTTT+CGG | - | chr5_2:18342161-18342180 | Msa0761250:intron | 35.0% |
| AATTAATGCAGCTATGGTAC+CGG | - | chr5_2:18342377-18342396 | Msa0761250:CDS | 35.0% | |
| !! | AAGTGTTTTATTACCACGCA+AGG | + | chr5_2:18342591-18342610 | None:intergenic | 35.0% |
| ACCTTCACCAACTACAAAAT+TGG | - | chr5_2:18342729-18342748 | Msa0761250:intron | 35.0% | |
| !!! | TCCAATTTTGTAGTTGGTGA+AGG | + | chr5_2:18342733-18342752 | None:intergenic | 35.0% |
| CACCAACTACAAAATTGGAA+AGG | - | chr5_2:18342734-18342753 | Msa0761250:intron | 35.0% | |
| ! | ACCCTTTCCAATTTTGTAGT+TGG | + | chr5_2:18342739-18342758 | None:intergenic | 35.0% |
| TTAGGGTGGTAGAATAAATG+TGG | - | chr5_2:18342845-18342864 | Msa0761250:intron | 35.0% | |
| AGGATGTTGCTGAGAAAATC+TGG | + | chr5_2:18335900-18335919 | None:intergenic | 40.0% | |
| ACATCCTAGCTACAATTCCT+TGG | - | chr5_2:18335913-18335932 | Msa0761250:three_prime_UTR | 40.0% | |
| CACCGTAATATCAAACACAC+TGG | + | chr5_2:18335998-18336017 | None:intergenic | 40.0% | |
| ! | ACGACACAGAAAAGTGTGAA+TGG | - | chr5_2:18336442-18336461 | Msa0761250:CDS | 40.0% |
| ! | CGACACAGAAAAGTGTGAAT+GGG | - | chr5_2:18336443-18336462 | Msa0761250:CDS | 40.0% |
| GTTCCTGTATTAGGTGTAGA+AGG | + | chr5_2:18336550-18336569 | None:intergenic | 40.0% | |
| GGAGTTGAAGTTCCTGTATT+AGG | + | chr5_2:18336559-18336578 | None:intergenic | 40.0% | |
| TGATCAGAGAGAGTAGCAAA+TGG | + | chr5_2:18336580-18336599 | None:intergenic | 40.0% | |
| AACCTAAAAGGTGGGATTGT+GGG | - | chr5_2:18337462-18337481 | Msa0761250:intron | 40.0% | |
| ! | ATTGTGGGTCCCATTTTATG+TGG | - | chr5_2:18337477-18337496 | Msa0761250:intron | 40.0% |
| AACTGATGAGATGGATCTGA+CGG | - | chr5_2:18337514-18337533 | Msa0761250:intron | 40.0% | |
| ACCAAATCAGCGTATCATCT+TGG | - | chr5_2:18337561-18337580 | Msa0761250:intron | 40.0% | |
| CCAAATCAGCGTATCATCTT+GGG | - | chr5_2:18337562-18337581 | Msa0761250:intron | 40.0% | |
| GCATCATTGACAAGAGAAAG+TGG | - | chr5_2:18337921-18337940 | Msa0761250:CDS | 40.0% | |
| AAGTGAGTATAGTACCAGCT+GGG | + | chr5_2:18338082-18338101 | None:intergenic | 40.0% | |
| TAAGTGAGTATAGTACCAGC+TGG | + | chr5_2:18338083-18338102 | None:intergenic | 40.0% | |
| TGGTGTAGAACTATATGAGC+AGG | - | chr5_2:18338511-18338530 | Msa0761250:intron | 40.0% | |
| CAGGCGATAAAGTATGAGAA+AGG | - | chr5_2:18338530-18338549 | Msa0761250:intron | 40.0% | |
| GGATCATTCATCACTTCCAA+TGG | - | chr5_2:18338551-18338570 | Msa0761250:intron | 40.0% | |
| GTCTCTGTGTTGGATATGTA+TGG | - | chr5_2:18338772-18338791 | Msa0761250:intron | 40.0% | |
| TCCTAACATTGAGATGGATG+AGG | - | chr5_2:18338951-18338970 | Msa0761250:intron | 40.0% | |
| TCCTCATCCATCTCAATGTT+AGG | + | chr5_2:18338955-18338974 | None:intergenic | 40.0% | |
| TTCTCAGCATGATGATTCTG+AGG | + | chr5_2:18339502-18339521 | None:intergenic | 40.0% | |
| ATGGTGCTCTATACTGTGAA+AGG | + | chr5_2:18339546-18339565 | None:intergenic | 40.0% | |
| CTGGATCCCAATTCAAGAAT+TGG | + | chr5_2:18340139-18340158 | None:intergenic | 40.0% | |
| CTGACTTTGATTCTGTTCTC+TGG | + | chr5_2:18340158-18340177 | None:intergenic | 40.0% | |
| GAACAATGAATGGTATGCTC+TGG | + | chr5_2:18340192-18340211 | None:intergenic | 40.0% | |
| ! | CACCTACCTTTTTGTCTTCA+AGG | + | chr5_2:18340293-18340312 | None:intergenic | 40.0% |
| ACGGTTACATGGAAACTTTC+CGG | + | chr5_2:18340531-18340550 | None:intergenic | 40.0% | |
| TAGTGAGTGAAACGGTTACA+TGG | + | chr5_2:18340542-18340561 | None:intergenic | 40.0% | |
| AGAAGGGAAATGGTTATCCT+CGG | - | chr5_2:18340599-18340618 | Msa0761250:intron | 40.0% | |
| AAGACCTTTCTTCATTTCCC+CGG | + | chr5_2:18340636-18340655 | None:intergenic | 40.0% | |
| AAGGAGAGAATTTGACGCTT+AGG | + | chr5_2:18340683-18340702 | None:intergenic | 40.0% | |
| CAAATTCTCTCCTTACACTC+TGG | - | chr5_2:18340689-18340708 | Msa0761250:intron | 40.0% | |
| CATATTGGAACCAGAGTGTA+AGG | + | chr5_2:18340702-18340721 | None:intergenic | 40.0% | |
| ! | CTTACACTCTGGTTCCAATA+TGG | - | chr5_2:18340700-18340719 | Msa0761250:intron | 40.0% |
| ATCTAGTGGAGTATAGGACA+AGG | + | chr5_2:18340826-18340845 | None:intergenic | 40.0% | |
| GAACATTGTTGGAGTGAGAA+TGG | - | chr5_2:18340991-18341010 | Msa0761250:intron | 40.0% | |
| AATGGTGTCTCCAACATTGA+AGG | - | chr5_2:18341009-18341028 | Msa0761250:intron | 40.0% | |
| ! | CTCTTTTGCATTGTCAGTGT+TGG | - | chr5_2:18341214-18341233 | Msa0761250:intron | 40.0% |
| ! | ATTGTCAGTGTTGGAAAACG+TGG | - | chr5_2:18341223-18341242 | Msa0761250:intron | 40.0% |
| ! | GGCATTATGGATAGGAGTAT+AGG | - | chr5_2:18341566-18341585 | Msa0761250:intron | 40.0% |
| GCTACAGAGGTTTCTTGTAA+AGG | + | chr5_2:18341692-18341711 | None:intergenic | 40.0% | |
| TGGTATGTACTCTATCGGAT+AGG | + | chr5_2:18341880-18341899 | None:intergenic | 40.0% | |
| ! | CTTTTGGCATGTGATGCATT+TGG | - | chr5_2:18341945-18341964 | Msa0761250:intron | 40.0% |
| ACCATGTACCATTTCATCAG+TGG | - | chr5_2:18342005-18342024 | Msa0761250:intron | 40.0% | |
| TCCACTGATGAAATGGTACA+TGG | + | chr5_2:18342009-18342028 | None:intergenic | 40.0% | |
| !! | ACCATTTTTATGTAGGTGGC+TGG | - | chr5_2:18342110-18342129 | Msa0761250:intron | 40.0% |
| ACCAGCCACCTACATAAAAA+TGG | + | chr5_2:18342114-18342133 | None:intergenic | 40.0% | |
| ! | TGGTACTGAGGATGGTATAA+AGG | - | chr5_2:18342130-18342149 | Msa0761250:intron | 40.0% |
| ! | CAAGCTGAAAATGTTGCTTG+TGG | + | chr5_2:18342158-18342177 | None:intergenic | 40.0% |
| GCATTGCAGCATACTTTGTA+GGG | + | chr5_2:18342208-18342227 | None:intergenic | 40.0% | |
| AGCATTGCAGCATACTTTGT+AGG | + | chr5_2:18342209-18342228 | None:intergenic | 40.0% | |
| ! | TGCAATGCTTGCTGAAAAGA+TGG | - | chr5_2:18342220-18342239 | Msa0761250:intron | 40.0% |
| ATTAATGCAGCTATGGTACC+GGG | - | chr5_2:18342378-18342397 | Msa0761250:CDS | 40.0% | |
| ! | ACTTAGTTTGATGCGATTCC+CGG | + | chr5_2:18342399-18342418 | None:intergenic | 40.0% |
| ! | GGATAACTAACCGCATTGAT+AGG | + | chr5_2:18342548-18342567 | None:intergenic | 40.0% |
| AATGCGACATTGTTGAAGCT+GGG | - | chr5_2:18342681-18342700 | Msa0761250:intron | 40.0% | |
| TGAAGCAATGTTGTGTTGTG+TGG | - | chr5_2:18342809-18342828 | Msa0761250:intron | 40.0% | |
| GAAGCAATGTTGTGTTGTGT+GGG | - | chr5_2:18342810-18342829 | Msa0761250:intron | 40.0% | |
| AAGCAATGTTGTGTTGTGTG+GGG | - | chr5_2:18342811-18342830 | Msa0761250:intron | 40.0% | |
| ! | ATATATTGGTTGGTTGGGTC+AGG | - | chr5_2:18342875-18342894 | Msa0761250:intron | 40.0% |
| CGAACCAAGGAATTGTAGCT+AGG | + | chr5_2:18335920-18335939 | None:intergenic | 45.0% | |
| CCACTCCATCAATATCGTGT+CGG | - | chr5_2:18336128-18336147 | Msa0761250:CDS | 45.0% | |
| TGACACCGACACGATATTGA+TGG | + | chr5_2:18336136-18336155 | None:intergenic | 45.0% | |
| !! | GGAAGTGTTGCAACAGAGAA+CGG | - | chr5_2:18336397-18336416 | Msa0761250:CDS | 45.0% |
| !! | GAAGTGTTGCAACAGAGAAC+GGG | - | chr5_2:18336398-18336417 | Msa0761250:CDS | 45.0% |
| GGGATTTGTCACGATGATAG+TGG | - | chr5_2:18336463-18336482 | Msa0761250:CDS | 45.0% | |
| GCACCTTCTACACCTAATAC+AGG | - | chr5_2:18336544-18336563 | Msa0761250:intron | 45.0% | |
| AGACTAGCGGAAAATCCGTT+TGG | - | chr5_2:18337437-18337456 | Msa0761250:intron | 45.0% | |
| GACTAGCGGAAAATCCGTTT+GGG | - | chr5_2:18337438-18337457 | Msa0761250:intron | 45.0% | |
| ATCCGTTTGGGCAACCTAAA+AGG | - | chr5_2:18337450-18337469 | Msa0761250:intron | 45.0% | |
| !!! | CACCTTTTAGGTTGCCCAAA+CGG | + | chr5_2:18337455-18337474 | None:intergenic | 45.0% |
| GTTTGGGCAACCTAAAAGGT+GGG | - | chr5_2:18337454-18337473 | Msa0761250:intron | 45.0% | |
| CAACCTAAAAGGTGGGATTG+TGG | - | chr5_2:18337461-18337480 | Msa0761250:intron | 45.0% | |
| ! | GTCAAGGCGCCACATAAAAT+GGG | + | chr5_2:18337489-18337508 | None:intergenic | 45.0% |
| ! | AGTCAAGGCGCCACATAAAA+TGG | + | chr5_2:18337490-18337509 | None:intergenic | 45.0% |
| ! | CCCAAGATGATACGCTGATT+TGG | + | chr5_2:18337565-18337584 | None:intergenic | 45.0% |
| GACAAGAGAAAGTGGACCAA+AGG | - | chr5_2:18337929-18337948 | Msa0761250:CDS | 45.0% | |
| AAGAGAAAGTGGACCAAAGG+TGG | - | chr5_2:18337932-18337951 | Msa0761250:CDS | 45.0% | |
| !! | ATGATCAACCTTCTGGCTCT+TGG | + | chr5_2:18337973-18337992 | None:intergenic | 45.0% |
| TTGGAGTAGGAACATGATGG+TGG | + | chr5_2:18338004-18338023 | None:intergenic | 45.0% | |
| TGGTTGGAGTAGGAACATGA+TGG | + | chr5_2:18338007-18338026 | None:intergenic | 45.0% | |
| CTAACAGCAATGGTTGGAGT+AGG | + | chr5_2:18338017-18338036 | None:intergenic | 45.0% | |
| CTGTCACTAACAGCAATGGT+TGG | + | chr5_2:18338023-18338042 | None:intergenic | 45.0% | |
| AGCACTGTCACTAACAGCAA+TGG | + | chr5_2:18338027-18338046 | None:intergenic | 45.0% | |
| AGTGAGTATAGTACCAGCTG+GGG | + | chr5_2:18338081-18338100 | None:intergenic | 45.0% | |
| CATCACTTCCAATGGAGCAA+TGG | - | chr5_2:18338559-18338578 | Msa0761250:intron | 45.0% | |
| ! | AAGTGTTGCCATTGCTCCAT+TGG | + | chr5_2:18338570-18338589 | None:intergenic | 45.0% |
| TTAACCACACGCTTGTCTCT+AGG | + | chr5_2:18338617-18338636 | None:intergenic | 45.0% | |
| TAGAGACAAGCGTGTGGTTA+AGG | - | chr5_2:18338616-18338635 | Msa0761250:intron | 45.0% | |
| CAAGCGTGTGGTTAAGGATA+AGG | - | chr5_2:18338622-18338641 | Msa0761250:intron | 45.0% | |
| GATTAGACGTGTCTCTGTGT+TGG | - | chr5_2:18338762-18338781 | Msa0761250:CDS | 45.0% | |
| GGGTTCTCCTAACATTGAGA+TGG | - | chr5_2:18338945-18338964 | Msa0761250:intron | 45.0% | |
| GATGGATGAGGAGACTTTCA+TGG | - | chr5_2:18338963-18338982 | Msa0761250:intron | 45.0% | |
| TCCAATTGGACATGTTTGGG+AGG | - | chr5_2:18339880-18339899 | Msa0761250:CDS | 45.0% | |
| ACCTCCCAAACATGTCCAAT+TGG | + | chr5_2:18339884-18339903 | None:intergenic | 45.0% | |
| GTCGATGACTATGTAACCAC+AGG | - | chr5_2:18340100-18340119 | Msa0761250:intron | 45.0% | |
| !! | TCGATAACTGGGTTGGTTAC+AGG | - | chr5_2:18340441-18340460 | Msa0761250:intron | 45.0% |
| CCAAAATTCTCCAGCTCTTC+AGG | + | chr5_2:18340482-18340501 | None:intergenic | 45.0% | |
| ! | CCTGAAGAGCTGGAGAATTT+TGG | - | chr5_2:18340479-18340498 | Msa0761250:intron | 45.0% |
| !! | GCTGGAGAATTTTGGTACTC+CGG | - | chr5_2:18340487-18340506 | Msa0761250:intron | 45.0% |
| ! | TCTGGTTCCAATATGGGCAA+AGG | - | chr5_2:18340707-18340726 | Msa0761250:intron | 45.0% |
| ACAAGGAAGGGAACATATCG+GGG | + | chr5_2:18340809-18340828 | None:intergenic | 45.0% | |
| GACAAGGAAGGGAACATATC+GGG | + | chr5_2:18340810-18340829 | None:intergenic | 45.0% | |
| GGACAAGGAAGGGAACATAT+CGG | + | chr5_2:18340811-18340830 | None:intergenic | 45.0% | |
| GTGGAGTATAGGACAAGGAA+GGG | + | chr5_2:18340821-18340840 | None:intergenic | 45.0% | |
| AGTGGAGTATAGGACAAGGA+AGG | + | chr5_2:18340822-18340841 | None:intergenic | 45.0% | |
| ! | CTAAATGCATCGATCTCTCC+CGG | - | chr5_2:18341043-18341062 | Msa0761250:intron | 45.0% |
| ! | TAAATGCATCGATCTCTCCC+GGG | - | chr5_2:18341044-18341063 | Msa0761250:intron | 45.0% |
| AGATATCAGGCTCTTTCTCC+CGG | + | chr5_2:18341065-18341084 | None:intergenic | 45.0% | |
| CCATAATGCCGTATTACAGG+AGG | + | chr5_2:18341556-18341575 | None:intergenic | 45.0% | |
| CCTCCTGTAATACGGCATTA+TGG | - | chr5_2:18341553-18341572 | Msa0761250:intron | 45.0% | |
| ! | CAAAAGTGTGAGTGCTACAG+AGG | + | chr5_2:18341705-18341724 | None:intergenic | 45.0% |
| TTTGGATGAGGTCCAACACA+TGG | + | chr5_2:18341915-18341934 | None:intergenic | 45.0% | |
| CATCAGTGGATATACTGCTC+TGG | - | chr5_2:18342019-18342038 | Msa0761250:intron | 45.0% | |
| !! | ACAGGATGGCTTGTTAACAC+TGG | - | chr5_2:18342257-18342276 | Msa0761250:intron | 45.0% |
| !! | GATGGCTTGTTAACACTGGT+TGG | - | chr5_2:18342261-18342280 | Msa0761250:intron | 45.0% |
| ! | CTTGTTAACACTGGTTGGTC+CGG | - | chr5_2:18342266-18342285 | Msa0761250:intron | 45.0% |
| ! | ACTAAAAGCATACCTGCCAC+CGG | + | chr5_2:18342288-18342307 | None:intergenic | 45.0% |
| TATTCACAATGGAAGCCTCC+TGG | - | chr5_2:18342442-18342461 | Msa0761250:CDS | 45.0% | |
| ATTCACAATGGAAGCCTCCT+GGG | - | chr5_2:18342443-18342462 | Msa0761250:CDS | 45.0% | |
| GTTCGTTTATTCACCTTGCG+TGG | - | chr5_2:18342575-18342594 | Msa0761250:intron | 45.0% | |
| !! | GTGTGTTTGATGGATTGCAG+TGG | - | chr5_2:18342640-18342659 | Msa0761250:intron | 45.0% |
| CAATGCGACATTGTTGAAGC+TGG | - | chr5_2:18342680-18342699 | Msa0761250:intron | 45.0% | |
| CTGCAAGAATCTCTTCTGTG+AGG | + | chr5_2:18342770-18342789 | None:intergenic | 45.0% | |
| ACAGAAGAGATTCTTGCAGC+TGG | - | chr5_2:18342771-18342790 | Msa0761250:intron | 45.0% | |
| AGCAATGTTGTGTTGTGTGG+GGG | - | chr5_2:18342812-18342831 | Msa0761250:intron | 45.0% | |
| !!! | TATTATAATTGATTTTTTAA+AGG | - | chr5_2:18337004-18337023 | Msa0761250:CDS | 5.0% |
| !!! | TTTATTTTTTTTTATTTTGT+TGG | - | chr5_2:18337064-18337083 | Msa0761250:intron | 5.0% |
| !!! | TTATTTTTTTTTATTTTGTT+GGG | - | chr5_2:18337065-18337084 | Msa0761250:intron | 5.0% |
| !!! | TATTTATTTTTTAATGTTTT+TGG | + | chr5_2:18339187-18339206 | None:intergenic | 5.0% |
| !! | ACATATATAAATTATATATA+AGG | + | chr5_2:18340355-18340374 | None:intergenic | 5.0% |
| !! | TTATATATGTATAAATAAAA+AGG | - | chr5_2:18340365-18340384 | Msa0761250:CDS | 5.0% |
| CCGACACGATATTGATGGAG+TGG | + | chr5_2:18336131-18336150 | None:intergenic | 50.0% | |
| CGTTTGGGCAACCTAAAAGG+TGG | - | chr5_2:18337453-18337472 | Msa0761250:intron | 50.0% | |
| ! | GACCCACAATCCCACCTTTT+AGG | + | chr5_2:18337467-18337486 | None:intergenic | 50.0% |
| GCCAAATGCTCTGATTGCGT+GGG | - | chr5_2:18337538-18337557 | Msa0761250:intron | 50.0% | |
| ! | TCCCACGCAATCAGAGCATT+TGG | + | chr5_2:18337542-18337561 | None:intergenic | 50.0% |
| AAGTGGACCAAAGGTGGTGA+AGG | - | chr5_2:18337938-18337957 | Msa0761250:CDS | 50.0% | |
| AGTGGACCAAAGGTGGTGAA+GGG | - | chr5_2:18337939-18337958 | Msa0761250:CDS | 50.0% | |
| GGAGCAATGGCAACACTTTC+TGG | - | chr5_2:18338572-18338591 | Msa0761250:intron | 50.0% | |
| ! | ACACTTTCTGGTGCCAAGAC+AGG | - | chr5_2:18338584-18338603 | Msa0761250:intron | 50.0% |
| TCTAGGAGAACGACCTGTCT+TGG | + | chr5_2:18338600-18338619 | None:intergenic | 50.0% | |
| TTCTCCTAGAGACAAGCGTG+TGG | - | chr5_2:18338610-18338629 | Msa0761250:intron | 50.0% | |
| ACCATGCCTATGCTGTGCTA+AGG | - | chr5_2:18339561-18339580 | Msa0761250:intron | 50.0% | |
| GACATGCCTTAGCACAGCAT+AGG | + | chr5_2:18339570-18339589 | None:intergenic | 50.0% | |
| ! | AGGGTGGCTACAAGTTGAAG+TGG | - | chr5_2:18339811-18339830 | Msa0761250:intron | 50.0% |
| TGGTCGTTCACAAACACCTG+TGG | + | chr5_2:18340119-18340138 | None:intergenic | 50.0% | |
| TTCTCCAGCTCTTCAGGACT+GGG | + | chr5_2:18340476-18340495 | None:intergenic | 50.0% | |
| ATTCTCCAGCTCTTCAGGAC+TGG | + | chr5_2:18340477-18340496 | None:intergenic | 50.0% | |
| TACGCCGGGGAAATGAAGAA+AGG | - | chr5_2:18340629-18340648 | Msa0761250:intron | 50.0% | |
| GGTTCCAATATGGGCAAAGG+TGG | - | chr5_2:18340710-18340729 | Msa0761250:intron | 50.0% | |
| ATCGCCACCTTTGCCCATAT+TGG | + | chr5_2:18340717-18340736 | None:intergenic | 50.0% | |
| GGCGATGTTGCTCTCTTCTT+TGG | - | chr5_2:18340731-18340750 | Msa0761250:intron | 50.0% | |
| GCTCTCTTCTTTGGACTCTC+AGG | - | chr5_2:18340740-18340759 | Msa0761250:intron | 50.0% | |
| GGTGTCTCCAACATTGAAGG+TGG | - | chr5_2:18341012-18341031 | Msa0761250:intron | 50.0% | |
| GATATCAGGCTCTTTCTCCC+GGG | + | chr5_2:18341064-18341083 | None:intergenic | 50.0% | |
| GGGAGAAAGAGCCTGATATC+TGG | - | chr5_2:18341064-18341083 | Msa0761250:intron | 50.0% | |
| !! | AGGGTTAGCTTACTCACAGG+TGG | + | chr5_2:18341978-18341997 | None:intergenic | 50.0% |
| ACCTGTGAGTAAGCTAACCC+TGG | - | chr5_2:18341977-18341996 | Msa0761250:intron | 50.0% | |
| TATGTAGGTGGCTGGTACTG+AGG | - | chr5_2:18342118-18342137 | Msa0761250:intron | 50.0% | |
| GCTGAAAAGATGGAGAGCCA+TGG | - | chr5_2:18342230-18342249 | Msa0761250:intron | 50.0% | |
| TTCACAATGGAAGCCTCCTG+GGG | - | chr5_2:18342444-18342463 | Msa0761250:CDS | 50.0% | |
| TCTTCTTGTATTCTGCCCCC+AGG | + | chr5_2:18342463-18342482 | None:intergenic | 50.0% | |
| CTACTTCAGTTGGGGTCTGA+AGG | + | chr5_2:18342499-18342518 | None:intergenic | 50.0% | |
| TCAGACCCCAACTGAAGTAG+AGG | - | chr5_2:18342499-18342518 | Msa0761250:CDS | 50.0% | |
| CAGACCCCAACTGAAGTAGA+GGG | - | chr5_2:18342500-18342519 | Msa0761250:CDS | 50.0% | |
| GACACCCTCTACTTCAGTTG+GGG | + | chr5_2:18342507-18342526 | None:intergenic | 50.0% | |
| GGACACCCTCTACTTCAGTT+GGG | + | chr5_2:18342508-18342527 | None:intergenic | 50.0% | |
| TGTGGGGGACTAGGATTGTT+AGG | - | chr5_2:18342827-18342846 | Msa0761250:intron | 50.0% | |
| GTGGGGGACTAGGATTGTTA+GGG | - | chr5_2:18342828-18342847 | Msa0761250:intron | 50.0% | |
| GCAACAGAGAACGGGAGCAA+CGG | - | chr5_2:18336406-18336425 | Msa0761250:CDS | 55.0% | |
| CAACAGAGAACGGGAGCAAC+GGG | - | chr5_2:18336407-18336426 | Msa0761250:CDS | 55.0% | |
| CGCCAAATGCTCTGATTGCG+TGG | - | chr5_2:18337537-18337556 | Msa0761250:intron | 55.0% | |
| GGATCTCCCTTCACCACCTT+TGG | + | chr5_2:18337948-18337967 | None:intergenic | 55.0% | |
| AGATCCAGCCAAGAGCCAGA+AGG | - | chr5_2:18337962-18337981 | Msa0761250:intron | 55.0% | |
| !! | TCAACCTTCTGGCTCTTGGC+TGG | + | chr5_2:18337969-18337988 | None:intergenic | 55.0% |
| CTCTACAATCTCTCCCCAGC+TGG | - | chr5_2:18338065-18338084 | Msa0761250:intron | 55.0% | |
| CAGACTCGAACGCGACACAT+CGG | + | chr5_2:18338861-18338880 | None:intergenic | 55.0% | |
| CGTTCGAGTCTGAGCCTCAT+TGG | - | chr5_2:18338869-18338888 | Msa0761250:intron | 55.0% | |
| GCCTTAGCACAGCATAGGCA+TGG | + | chr5_2:18339565-18339584 | None:intergenic | 55.0% | |
| !! | GCCAGGGTTAGCTTACTCAC+AGG | + | chr5_2:18341981-18342000 | None:intergenic | 55.0% |
| ATGGTACATGGTCTGCGCCA+GGG | + | chr5_2:18341997-18342016 | None:intergenic | 55.0% | |
| AATGGTACATGGTCTGCGCC+AGG | + | chr5_2:18341998-18342017 | None:intergenic | 55.0% | |
| ! | TAGGTGGCTGGTACTGAGGA+TGG | - | chr5_2:18342122-18342141 | Msa0761250:intron | 55.0% |
| ATGGAGAGCCATGGTGCAAC+AGG | - | chr5_2:18342239-18342258 | Msa0761250:intron | 55.0% | |
| AGAGCCATGGTGCAACAGGA+TGG | - | chr5_2:18342243-18342262 | Msa0761250:intron | 55.0% | |
| CAAGCCATCCTGTTGCACCA+TGG | + | chr5_2:18342250-18342269 | None:intergenic | 55.0% | |
| ! | GTTAACACTGGTTGGTCCGG+TGG | - | chr5_2:18342269-18342288 | Msa0761250:intron | 55.0% |
| TCACAATGGAAGCCTCCTGG+GGG | - | chr5_2:18342445-18342464 | Msa0761250:CDS | 55.0% | |
| TCTTGTATTCTGCCCCCAGG+AGG | + | chr5_2:18342460-18342479 | None:intergenic | 55.0% | |
| GGGACACCCTCTACTTCAGT+TGG | + | chr5_2:18342509-18342528 | None:intergenic | 55.0% | |
| GCGACATTGTTGAAGCTGGG+TGG | - | chr5_2:18342684-18342703 | Msa0761250:intron | 55.0% | |
| GTTGTGTTGTGTGGGGGACT+AGG | - | chr5_2:18342818-18342837 | Msa0761250:intron | 55.0% | |
| GGGGACTAGGATTGTTAGGG+TGG | - | chr5_2:18342831-18342850 | Msa0761250:intron | 55.0% | |
| CCAGCTCTTCAGGACTGGGT+CGG | + | chr5_2:18340472-18340491 | None:intergenic | 60.0% | |
| ATCCTCGGCACACAGTACGC+CGG | - | chr5_2:18340614-18340633 | Msa0761250:intron | 60.0% | |
| CCGACCCAGTCCTGAAGAGC+TGG | - | chr5_2:18340469-18340488 | Msa0761250:intron | 65.0% | |
| TCCTCGGCACACAGTACGCC+GGG | - | chr5_2:18340615-18340634 | Msa0761250:intron | 65.0% | |
| ! | ACACTGGTTGGTCCGGTGGC+AGG | - | chr5_2:18342273-18342292 | Msa0761250:CDS | 65.0% |
| CCTCGGCACACAGTACGCCG+GGG | - | chr5_2:18340616-18340635 | Msa0761250:intron | 70.0% | |
| CCCCGGCGTACTGTGTGCCG+AGG | + | chr5_2:18340619-18340638 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 18335802 | 18343102 | 18335802 | ID=Msa0761250;Name=Msa0761250 |
| chr5_2 | mRNA | 18335802 | 18343102 | 18335802 | ID=Msa0761250-mRNA-1;Parent=Msa0761250;Name=Msa0761250-mRNA-1;_AED=0.10;_eAED=0.10;_QI=141|0.91|0.92|1|0.91|0.84|13|296|652 |
| chr5_2 | exon | 18335802 | 18336244 | 18335802 | ID=Msa0761250-mRNA-1:exon:7960;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18336348 | 18336516 | 18336348 | ID=Msa0761250-mRNA-1:exon:7959;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18336610 | 18336779 | 18336610 | ID=Msa0761250-mRNA-1:exon:7958;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18336864 | 18337027 | 18336864 | ID=Msa0761250-mRNA-1:exon:7957;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18337608 | 18337673 | 18337608 | ID=Msa0761250-mRNA-1:exon:7956;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18337796 | 18337969 | 18337796 | ID=Msa0761250-mRNA-1:exon:7955;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18338143 | 18338441 | 18338143 | ID=Msa0761250-mRNA-1:exon:7954;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18338682 | 18338782 | 18338682 | ID=Msa0761250-mRNA-1:exon:7953;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18339875 | 18339959 | 18339875 | ID=Msa0761250-mRNA-1:exon:7952;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18340232 | 18340385 | 18340232 | ID=Msa0761250-mRNA-1:exon:7951;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18340818 | 18340993 | 18340818 | ID=Msa0761250-mRNA-1:exon:7950;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18342272 | 18342533 | 18342272 | ID=Msa0761250-mRNA-1:exon:7949;Parent=Msa0761250-mRNA-1 |
| chr5_2 | exon | 18342970 | 18343102 | 18342970 | ID=Msa0761250-mRNA-1:exon:7948;Parent=Msa0761250-mRNA-1 |
| chr5_2 | five_prime_UTR | 18342970 | 18343102 | 18342970 | ID=Msa0761250-mRNA-1:five_prime_utr;Parent=Msa0761250-mRNA-1 |
| chr5_2 | five_prime_UTR | 18342526 | 18342533 | 18342526 | ID=Msa0761250-mRNA-1:five_prime_utr;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18342272 | 18342525 | 18342272 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18340818 | 18340993 | 18340818 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18340232 | 18340385 | 18340232 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18339875 | 18339959 | 18339875 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18338682 | 18338782 | 18338682 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18338143 | 18338441 | 18338143 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18337796 | 18337969 | 18337796 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18337608 | 18337673 | 18337608 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18336864 | 18337027 | 18336864 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18336610 | 18336779 | 18336610 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18336348 | 18336516 | 18336348 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | CDS | 18336098 | 18336244 | 18336098 | ID=Msa0761250-mRNA-1:cds;Parent=Msa0761250-mRNA-1 |
| chr5_2 | three_prime_UTR | 18335802 | 18336097 | 18335802 | ID=Msa0761250-mRNA-1:three_prime_utr;Parent=Msa0761250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
