Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378390 | AES72921.1 | 97.723 | 483 | 10 | 1 | 1 | 482 | 1 | 483 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378390 | sp|Q38967|AAP2_ARATH | 65.639 | 454 | 152 | 2 | 29 | 478 | 36 | 489 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378390 | G7JC72 | 97.723 | 483 | 10 | 1 | 1 | 482 | 1 | 483 | 0.0 | 964 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0378390 | 0.815845 | 7.502175e-52 | -8.615850e-47 |
| Msa0019570 | Msa0378390 | 0.841565 | 4.398469e-58 | -8.615850e-47 |
| Msa0039610 | Msa0378390 | 0.805352 | 1.391324e-49 | -8.615850e-47 |
| Msa0043240 | Msa0378390 | 0.803227 | 3.854124e-49 | -8.615850e-47 |
| Msa0043840 | Msa0378390 | 0.837488 | 5.047918e-57 | -8.615850e-47 |
| Msa0046390 | Msa0378390 | 0.811679 | 6.204162e-51 | -8.615850e-47 |
| Msa0046430 | Msa0378390 | 0.800352 | 1.500710e-48 | -8.615850e-47 |
| Msa0059880 | Msa0378390 | 0.829217 | 5.826079e-55 | -8.615850e-47 |
| Msa0085110 | Msa0378390 | 0.805592 | 1.238982e-49 | -8.615850e-47 |
| Msa0090500 | Msa0378390 | 0.825250 | 5.193410e-54 | -8.615850e-47 |
| Msa0116480 | Msa0378390 | 0.818755 | 1.660763e-52 | -8.615850e-47 |
| Msa0124070 | Msa0378390 | -0.801989 | 6.938702e-49 | -8.615850e-47 |
| Msa0130710 | Msa0378390 | 0.800200 | 1.611242e-48 | -8.615850e-47 |
| Msa0137970 | Msa0378390 | 0.842324 | 2.772429e-58 | -8.615850e-47 |
| Msa0150910 | Msa0378390 | 0.830976 | 2.168515e-55 | -8.615850e-47 |
| Msa0183920 | Msa0378390 | 0.817599 | 3.033769e-52 | -8.615850e-47 |
| Msa0212550 | Msa0378390 | 0.800737 | 1.252301e-48 | -8.615850e-47 |
| Msa0225910 | Msa0378390 | 0.803566 | 3.279911e-49 | -8.615850e-47 |
| Msa0234120 | Msa0378390 | 0.805059 | 1.602911e-49 | -8.615850e-47 |
| Msa0369660 | Msa0378390 | 0.801270 | 9.744886e-49 | -8.615850e-47 |
| Msa0378390 | Msa0388200 | -0.800831 | 1.198482e-48 | -8.615850e-47 |
| Msa0378390 | Msa0396790 | 0.800475 | 1.416123e-48 | -8.615850e-47 |
| Msa0378390 | Msa0398690 | 0.807134 | 5.863351e-50 | -8.615850e-47 |
| Msa0378390 | Msa0424240 | 0.814405 | 1.566591e-51 | -8.615850e-47 |
| Msa0378390 | Msa0427740 | 0.990268 | 7.773794e-182 | -8.615850e-47 |
| Msa0378390 | Msa0427970 | 0.986900 | 2.326000e-168 | -8.615850e-47 |
| Msa0378390 | Msa0433670 | -0.820088 | 8.251129e-53 | -8.615850e-47 |
| Msa0378390 | Msa0444400 | 0.806592 | 7.634579e-50 | -8.615850e-47 |
| Msa0378390 | Msa0463890 | 0.810518 | 1.107435e-50 | -8.615850e-47 |
| Msa0378390 | Msa0464310 | 0.807646 | 4.565143e-50 | -8.615850e-47 |
| Msa0378390 | Msa0478400 | 0.816548 | 5.226428e-52 | -8.615850e-47 |
| Msa0378390 | Msa0518570 | 0.990578 | 2.643715e-183 | -8.615850e-47 |
| Msa0378390 | Msa0521570 | -0.803162 | 3.976301e-49 | -8.615850e-47 |
| Msa0378390 | Msa0538440 | 0.809977 | 1.449308e-50 | -8.615850e-47 |
| Msa0378390 | Msa0621870 | -0.849353 | 3.415761e-60 | -8.615850e-47 |
| Msa0378390 | Msa0634290 | 0.806072 | 9.824978e-50 | -8.615850e-47 |
| Msa0378390 | Msa0668220 | 0.805424 | 1.343993e-49 | -8.615850e-47 |
| Msa0378390 | Msa0716600 | 0.811525 | 6.703490e-51 | -8.615850e-47 |
| Msa0378390 | Msa0720660 | 0.810186 | 1.306375e-50 | -8.615850e-47 |
| Msa0378390 | Msa0735340 | 0.809040 | 2.303027e-50 | -8.615850e-47 |
| Msa0378390 | Msa0752290 | -0.812631 | 3.846082e-51 | -8.615850e-47 |
| Msa0378390 | Msa0761250 | 0.832701 | 8.133372e-56 | -8.615850e-47 |
| Msa0378390 | Msa0777070 | 0.803391 | 3.564909e-49 | -8.615850e-47 |
| Msa0378390 | Msa0787860 | 0.803831 | 2.889849e-49 | -8.615850e-47 |
| Msa0378390 | Msa0799710 | -0.801370 | 9.298350e-49 | -8.615850e-47 |
| Msa0378390 | Msa0803560 | 0.857491 | 1.574129e-62 | -8.615850e-47 |
| Msa0378390 | Msa0814160 | 0.810301 | 1.233793e-50 | -8.615850e-47 |
| Msa0378390 | Msa0833230 | 0.809382 | 1.945253e-50 | -8.615850e-47 |
| Msa0378390 | Msa0854840 | 0.811602 | 6.448748e-51 | -8.615850e-47 |
| Msa0378390 | Msa0864730 | -0.802425 | 5.644235e-49 | -8.615850e-47 |
| Msa0378390 | Msa0864750 | -0.803460 | 3.448777e-49 | -8.615850e-47 |
| Msa0378390 | Msa0880060 | -0.824427 | 8.121258e-54 | -8.615850e-47 |
| Msa0378390 | Msa0882430 | 0.845480 | 3.956761e-59 | -8.615850e-47 |
| Msa0378390 | Msa0886370 | 0.805299 | 1.427187e-49 | -8.615850e-47 |
| Msa0378390 | Msa0910590 | 0.806085 | 9.760986e-50 | -8.615850e-47 |
| Msa0378390 | Msa0913500 | 0.814424 | 1.551566e-51 | -8.615850e-47 |
| Msa0378390 | Msa0931370 | 0.801572 | 8.453552e-49 | -8.615850e-47 |
| Msa0378390 | Msa0951060 | 0.821343 | 4.245795e-53 | -8.615850e-47 |
| Msa0378390 | Msa0973890 | -0.802728 | 4.889223e-49 | -8.615850e-47 |
| Msa0378390 | Msa0985250 | 0.803381 | 3.581847e-49 | -8.615850e-47 |
| Msa0378390 | Msa0985260 | 0.820112 | 8.145907e-53 | -8.615850e-47 |
| Msa0378390 | Msa1014530 | -0.829258 | 5.693859e-55 | -8.615850e-47 |
| Msa0378390 | Msa1024420 | 0.802167 | 6.377715e-49 | -8.615850e-47 |
| Msa0378390 | Msa1037060 | 0.856004 | 4.312625e-62 | -8.615850e-47 |
| Msa0378390 | Msa1077940 | 0.861836 | 7.753712e-64 | -8.615850e-47 |
| Msa0378390 | Msa1087380 | 0.805855 | 1.091324e-49 | -8.615850e-47 |
| Msa0378390 | Msa1096280 | -0.812538 | 4.030502e-51 | -8.615850e-47 |
| Msa0378390 | Msa1129540 | 0.826726 | 2.315839e-54 | -8.615850e-47 |
| Msa0378390 | Msa1164800 | 0.842548 | 2.418195e-58 | -8.615850e-47 |
| Msa0378390 | Msa1173290 | 0.803076 | 4.141598e-49 | -8.615850e-47 |
| Msa0378390 | Msa1177960 | -0.801197 | 1.008613e-48 | -8.615850e-47 |
| Msa0378390 | Msa1184010 | -0.808522 | 2.971832e-50 | -8.615850e-47 |
| Msa0378390 | Msa1219780 | 0.847137 | 1.398495e-59 | -8.615850e-47 |
| Msa0378390 | Msa1222030 | 0.829743 | 4.339815e-55 | -8.615850e-47 |
| Msa0378390 | Msa1228350 | -0.800256 | 1.569449e-48 | -8.615850e-47 |
| Msa0378390 | Msa1262320 | 0.802565 | 5.281873e-49 | -8.615850e-47 |
| Msa0378390 | Msa1265990 | -0.849450 | 3.209705e-60 | -8.615850e-47 |
| Msa0378390 | Msa1266710 | 0.832078 | 1.160622e-55 | -8.615850e-47 |
| Msa0378390 | Msa1323150 | 0.807844 | 4.145462e-50 | -8.615850e-47 |
| Msa0378390 | Msa1341030 | 0.813488 | 2.495146e-51 | -8.615850e-47 |
| Msa0378390 | Msa1373910 | -0.801307 | 9.576208e-49 | -8.615850e-47 |
| Msa0378390 | Msa1379250 | 0.816676 | 4.891236e-52 | -8.615850e-47 |
| Msa0378390 | Msa1400700 | 0.877704 | 5.074792e-69 | -8.615850e-47 |
| Msa0378390 | Msa1407210 | 0.844136 | 9.113265e-59 | -8.615850e-47 |
| Msa0378390 | Msa1423660 | 0.809648 | 1.705368e-50 | -8.615850e-47 |
| Msa0378390 | Msa1428990 | -0.802360 | 5.822866e-49 | -8.615850e-47 |
| Msa0378390 | Msa1445780 | 0.808147 | 3.572750e-50 | -8.615850e-47 |
| Msa0378390 | Msa1450130 | 0.804918 | 1.715395e-49 | -8.615850e-47 |
| Msa0378390 | Msa1462600 | -0.807576 | 4.724239e-50 | -8.615850e-47 |
| Msa0264220 | Msa0378390 | 0.810835 | 9.461727e-51 | -8.615850e-47 |
| Msa0274260 | Msa0378390 | 0.804523 | 2.074085e-49 | -8.615850e-47 |
| Msa0297950 | Msa0378390 | 0.848135 | 7.434235e-60 | -8.615850e-47 |
| Msa0302220 | Msa0378390 | 0.813275 | 2.778968e-51 | -8.615850e-47 |
| Msa0318370 | Msa0378390 | 0.829468 | 5.062419e-55 | -8.615850e-47 |
| Msa0335890 | Msa0378390 | 0.823075 | 1.683389e-53 | -8.615850e-47 |
| Msa0336640 | Msa0378390 | 0.802778 | 4.774461e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378390 | MtrunA17_Chr8g0384661 | 68.736 | 451 | 141 | 0 | 31 | 481 | 43 | 493 | 0.0 | 667 |
| Msa0378390 | MtrunA17_Chr3g0130651 | 70.130 | 462 | 136 | 1 | 19 | 480 | 7 | 466 | 0.0 | 658 |
| Msa0378390 | MtrunA17_Chr3g0130641 | 66.180 | 479 | 157 | 2 | 1 | 479 | 1 | 474 | 0.0 | 658 |
| Msa0378390 | MtrunA17_Chr3g0125091 | 61.284 | 483 | 177 | 5 | 1 | 479 | 1 | 477 | 0.0 | 612 |
| Msa0378390 | MtrunA17_Chr3g0125081 | 60.707 | 481 | 180 | 4 | 1 | 478 | 1 | 475 | 0.0 | 611 |
| Msa0378390 | MtrunA17_Chr4g0037201 | 61.339 | 463 | 170 | 2 | 28 | 481 | 49 | 511 | 0.0 | 606 |
| Msa0378390 | MtrunA17_Chr3g0125101 | 59.627 | 483 | 185 | 5 | 1 | 479 | 1 | 477 | 0.0 | 593 |
| Msa0378390 | MtrunA17_Chr1g0159761 | 63.516 | 455 | 162 | 2 | 28 | 478 | 17 | 471 | 0.0 | 592 |
| Msa0378390 | MtrunA17_Chr3g0140761 | 54.430 | 474 | 210 | 4 | 11 | 478 | 5 | 478 | 0.0 | 521 |
| Msa0378390 | MtrunA17_Chr1g0146491 | 53.829 | 457 | 206 | 3 | 27 | 478 | 12 | 468 | 0.0 | 514 |
| Msa0378390 | MtrunA17_Chr3g0130671 | 96.761 | 247 | 7 | 1 | 1 | 246 | 1 | 247 | 7.68e-175 | 492 |
| Msa0378390 | MtrunA17_Chr1g0206871 | 51.868 | 455 | 205 | 4 | 37 | 478 | 14 | 467 | 3.19e-167 | 480 |
| Msa0378390 | MtrunA17_Chr3g0103231 | 51.020 | 441 | 211 | 2 | 31 | 468 | 16 | 454 | 7.91e-165 | 473 |
| Msa0378390 | MtrunA17_Chr3g0103211 | 50.113 | 441 | 215 | 2 | 31 | 468 | 16 | 454 | 1.04e-158 | 458 |
| Msa0378390 | MtrunA17_Chr3g0103221 | 51.030 | 437 | 209 | 3 | 35 | 468 | 27 | 461 | 3.65e-158 | 457 |
| Msa0378390 | MtrunA17_Chr5g0447221 | 50.229 | 436 | 210 | 4 | 37 | 468 | 28 | 460 | 7.58e-157 | 453 |
| Msa0378390 | MtrunA17_Chr3g0103271 | 49.115 | 452 | 220 | 4 | 20 | 467 | 9 | 454 | 1.34e-150 | 437 |
| Msa0378390 | MtrunA17_Chr3g0140531 | 47.046 | 457 | 237 | 3 | 26 | 478 | 12 | 467 | 2.09e-149 | 434 |
| Msa0378390 | MtrunA17_Chr1g0146411 | 46.930 | 456 | 232 | 4 | 26 | 478 | 21 | 469 | 1.47e-148 | 432 |
| Msa0378390 | MtrunA17_Chr1g0146331 | 46.137 | 453 | 236 | 5 | 32 | 479 | 14 | 463 | 6.42e-147 | 428 |
| Msa0378390 | MtrunA17_Chr1g0146391 | 46.018 | 452 | 237 | 4 | 32 | 479 | 6 | 454 | 6.00e-146 | 425 |
| Msa0378390 | MtrunA17_Chr2g0293331 | 46.358 | 453 | 236 | 4 | 31 | 479 | 5 | 454 | 4.20e-145 | 423 |
| Msa0378390 | MtrunA17_Chr3g0140541 | 47.323 | 467 | 240 | 4 | 15 | 478 | 3 | 466 | 1.97e-142 | 417 |
| Msa0378390 | MtrunA17_Chr5g0447231 | 43.349 | 436 | 241 | 3 | 37 | 468 | 24 | 457 | 7.45e-134 | 394 |
| Msa0378390 | MtrunA17_Chr3g0130661 | 99.448 | 181 | 1 | 0 | 302 | 482 | 1 | 181 | 1.64e-127 | 368 |
| Msa0378390 | MtrunA17_Chr1g0206851 | 48.361 | 366 | 178 | 4 | 119 | 479 | 19 | 378 | 1.05e-125 | 371 |
| Msa0378390 | MtrunA17_Chr5g0402151 | 60.000 | 295 | 85 | 3 | 41 | 335 | 3 | 264 | 9.48e-114 | 336 |
| Msa0378390 | MtrunA17_Chr1g0206831 | 50.298 | 336 | 156 | 4 | 143 | 473 | 6 | 335 | 7.35e-113 | 337 |
| Msa0378390 | MtrunA17_Chr3g0103251 | 48.424 | 349 | 146 | 3 | 152 | 468 | 21 | 367 | 9.80e-113 | 337 |
| Msa0378390 | MtrunA17_Chr1g0206821 | 53.785 | 251 | 113 | 3 | 20 | 268 | 5 | 254 | 9.54e-83 | 265 |
| Msa0378390 | MtrunA17_Chr1g0206821 | 52.232 | 224 | 104 | 1 | 261 | 481 | 307 | 530 | 2.32e-78 | 254 |
| Msa0378390 | MtrunA17_Chr6g0458931 | 28.889 | 450 | 276 | 11 | 38 | 479 | 42 | 455 | 1.14e-43 | 160 |
| Msa0378390 | MtrunA17_Chr2g0331721 | 30.120 | 415 | 243 | 12 | 39 | 443 | 48 | 425 | 8.16e-43 | 157 |
| Msa0378390 | MtrunA17_Chr8g0376991 | 27.902 | 448 | 281 | 12 | 39 | 479 | 24 | 436 | 3.09e-42 | 155 |
| Msa0378390 | MtrunA17_Chr4g0057851 | 28.989 | 445 | 274 | 10 | 39 | 476 | 11 | 420 | 1.13e-40 | 151 |
| Msa0378390 | MtrunA17_Chr5g0422741 | 30.679 | 427 | 250 | 13 | 27 | 445 | 17 | 405 | 4.72e-39 | 147 |
| Msa0378390 | MtrunA17_Chr1g0184721 | 26.872 | 454 | 293 | 12 | 32 | 478 | 16 | 437 | 1.44e-38 | 145 |
| Msa0378390 | MtrunA17_Chr6g0458921 | 29.821 | 446 | 276 | 10 | 39 | 479 | 15 | 428 | 4.85e-35 | 135 |
| Msa0378390 | MtrunA17_Chr6g0459031 | 29.821 | 446 | 276 | 10 | 39 | 479 | 15 | 428 | 5.04e-35 | 135 |
| Msa0378390 | MtrunA17_Chr3g0103261 | 49.587 | 121 | 61 | 0 | 31 | 151 | 16 | 136 | 6.24e-35 | 128 |
| Msa0378390 | MtrunA17_Chr1g0206861 | 50.781 | 128 | 61 | 2 | 17 | 143 | 1 | 127 | 3.94e-34 | 125 |
| Msa0378390 | MtrunA17_Chr1g0206841 | 63.830 | 94 | 34 | 0 | 27 | 120 | 10 | 103 | 8.95e-34 | 123 |
| Msa0378390 | MtrunA17_Chr2g0328081 | 29.372 | 446 | 280 | 8 | 38 | 479 | 14 | 428 | 1.10e-33 | 132 |
| Msa0378390 | MtrunA17_Chr6g0459021 | 28.571 | 469 | 291 | 12 | 20 | 479 | 14 | 447 | 2.62e-33 | 131 |
| Msa0378390 | MtrunA17_Chr6g0459011 | 29.621 | 422 | 261 | 9 | 54 | 471 | 1 | 390 | 3.12e-33 | 130 |
| Msa0378390 | MtrunA17_Chr7g0230011 | 28.194 | 454 | 272 | 11 | 39 | 479 | 31 | 443 | 3.56e-33 | 130 |
| Msa0378390 | MtrunA17_Chr3g0077651 | 28.381 | 451 | 279 | 12 | 39 | 479 | 53 | 469 | 5.40e-33 | 130 |
| Msa0378390 | MtrunA17_Chr1g0198081 | 26.608 | 451 | 285 | 17 | 44 | 481 | 64 | 481 | 5.63e-32 | 127 |
| Msa0378390 | MtrunA17_Chr1g0198531 | 28.571 | 427 | 261 | 13 | 27 | 445 | 13 | 403 | 7.27e-32 | 127 |
| Msa0378390 | MtrunA17_Chr4g0027241 | 26.941 | 438 | 270 | 16 | 20 | 440 | 17 | 421 | 1.57e-31 | 126 |
| Msa0378390 | MtrunA17_Chr6g0459001 | 28.184 | 479 | 283 | 13 | 38 | 479 | 22 | 476 | 1.18e-30 | 124 |
| Msa0378390 | MtrunA17_Chr3g0122921 | 25.887 | 479 | 288 | 13 | 17 | 479 | 1 | 428 | 1.98e-30 | 122 |
| Msa0378390 | MtrunA17_Chr1g0198541 | 27.111 | 450 | 284 | 11 | 34 | 475 | 20 | 433 | 2.81e-30 | 122 |
| Msa0378390 | MtrunA17_Chr1g0146351 | 58.586 | 99 | 40 | 1 | 48 | 146 | 13 | 110 | 3.37e-29 | 110 |
| Msa0378390 | MtrunA17_Chr8g0387941 | 23.899 | 477 | 312 | 16 | 20 | 479 | 6 | 448 | 3.91e-26 | 110 |
| Msa0378390 | MtrunA17_Chr4g0038711 | 24.729 | 461 | 295 | 14 | 39 | 477 | 71 | 501 | 3.36e-22 | 99.4 |
| Msa0378390 | MtrunA17_Chr5g0436281 | 26.128 | 421 | 258 | 16 | 69 | 479 | 4 | 381 | 1.33e-19 | 90.5 |
| Msa0378390 | MtrunA17_Chr3g0143701 | 22.560 | 461 | 309 | 13 | 26 | 468 | 68 | 498 | 1.44e-19 | 91.7 |
| Msa0378390 | MtrunA17_Chr5g0406351 | 23.570 | 437 | 286 | 12 | 39 | 459 | 108 | 512 | 8.40e-17 | 83.2 |
| Msa0378390 | MtrunA17_Chr3g0112971 | 25.061 | 407 | 250 | 15 | 84 | 479 | 72 | 434 | 5.44e-15 | 77.0 |
| Msa0378390 | MtrunA17_Chr5g0406331 | 23.488 | 430 | 280 | 12 | 39 | 452 | 87 | 483 | 2.17e-14 | 75.5 |
| Msa0378390 | MtrunA17_Chr1g0159751 | 39.024 | 82 | 43 | 1 | 281 | 362 | 1 | 75 | 5.41e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378390 | AT5G09220.1 | 65.639 | 454 | 152 | 2 | 29 | 478 | 36 | 489 | 0.0 | 644 |
| Msa0378390 | AT5G63850.1 | 63.676 | 457 | 162 | 2 | 29 | 481 | 9 | 465 | 0.0 | 628 |
| Msa0378390 | AT1G77380.1 | 65.419 | 454 | 154 | 1 | 28 | 478 | 19 | 472 | 0.0 | 618 |
| Msa0378390 | AT1G44100.1 | 61.638 | 464 | 167 | 4 | 26 | 479 | 15 | 477 | 0.0 | 611 |
| Msa0378390 | AT1G10010.1 | 52.863 | 454 | 210 | 2 | 29 | 478 | 18 | 471 | 0.0 | 516 |
| Msa0378390 | AT1G10010.2 | 52.863 | 454 | 210 | 2 | 29 | 478 | 19 | 472 | 0.0 | 516 |
| Msa0378390 | AT1G58360.1 | 53.027 | 479 | 214 | 4 | 4 | 478 | 9 | 480 | 4.64e-180 | 513 |
| Msa0378390 | AT5G49630.1 | 54.585 | 458 | 202 | 4 | 28 | 479 | 22 | 479 | 2.00e-177 | 506 |
| Msa0378390 | AT5G23810.1 | 46.753 | 462 | 236 | 5 | 15 | 468 | 2 | 461 | 4.23e-136 | 401 |
| Msa0378390 | AT5G23810.2 | 47.493 | 339 | 173 | 3 | 15 | 350 | 2 | 338 | 5.10e-100 | 305 |
| Msa0378390 | AT5G23810.4 | 44.747 | 257 | 137 | 3 | 15 | 268 | 2 | 256 | 2.39e-67 | 217 |
| Msa0378390 | AT5G23810.5 | 43.541 | 209 | 115 | 2 | 15 | 220 | 2 | 210 | 7.90e-51 | 173 |
| Msa0378390 | AT5G23810.3 | 43.541 | 209 | 115 | 2 | 15 | 220 | 2 | 210 | 7.90e-51 | 173 |
| Msa0378390 | AT5G40780.1 | 28.378 | 444 | 284 | 9 | 39 | 479 | 34 | 446 | 3.27e-43 | 159 |
| Msa0378390 | AT1G48640.1 | 28.788 | 462 | 291 | 10 | 24 | 479 | 24 | 453 | 2.15e-42 | 156 |
| Msa0378390 | AT5G40780.3 | 28.205 | 429 | 274 | 9 | 54 | 479 | 1 | 398 | 1.50e-39 | 147 |
| Msa0378390 | AT5G40780.2 | 28.205 | 429 | 274 | 9 | 54 | 479 | 1 | 398 | 1.50e-39 | 147 |
| Msa0378390 | AT1G24400.1 | 29.139 | 453 | 269 | 12 | 39 | 479 | 29 | 441 | 4.99e-39 | 147 |
| Msa0378390 | AT1G67640.1 | 29.464 | 448 | 274 | 10 | 39 | 479 | 29 | 441 | 1.40e-37 | 143 |
| Msa0378390 | AT3G01760.1 | 26.724 | 464 | 303 | 11 | 19 | 474 | 8 | 442 | 1.99e-36 | 140 |
| Msa0378390 | AT1G71680.1 | 29.130 | 460 | 289 | 10 | 26 | 479 | 20 | 448 | 7.53e-35 | 135 |
| Msa0378390 | AT1G61270.1 | 28.670 | 436 | 267 | 11 | 39 | 465 | 34 | 434 | 8.86e-35 | 135 |
| Msa0378390 | AT1G71680.2 | 31.672 | 341 | 210 | 9 | 26 | 360 | 20 | 343 | 3.81e-32 | 126 |
| Msa0378390 | AT1G25530.1 | 28.054 | 442 | 269 | 13 | 38 | 467 | 27 | 431 | 2.71e-30 | 122 |
| Msa0378390 | AT1G08230.2 | 25.885 | 452 | 298 | 12 | 37 | 479 | 26 | 449 | 2.73e-27 | 114 |
| Msa0378390 | AT5G41800.1 | 24.672 | 458 | 295 | 16 | 37 | 479 | 25 | 447 | 2.49e-23 | 102 |
| Msa0378390 | AT3G55740.1 | 25.167 | 449 | 279 | 18 | 44 | 479 | 33 | 437 | 6.52e-21 | 95.5 |
| Msa0378390 | AT3G55740.2 | 25.416 | 421 | 261 | 16 | 69 | 479 | 4 | 381 | 7.20e-21 | 94.7 |
| Msa0378390 | AT3G55740.3 | 25.416 | 421 | 261 | 16 | 69 | 479 | 4 | 381 | 7.20e-21 | 94.7 |
| Msa0378390 | AT1G08230.4 | 28.526 | 312 | 199 | 7 | 174 | 479 | 37 | 330 | 2.13e-20 | 92.4 |
| Msa0378390 | AT1G08230.6 | 28.526 | 312 | 199 | 7 | 174 | 479 | 37 | 330 | 2.13e-20 | 92.4 |
| Msa0378390 | AT1G08230.5 | 28.526 | 312 | 199 | 7 | 174 | 479 | 37 | 330 | 2.13e-20 | 92.4 |
| Msa0378390 | AT1G08230.3 | 28.846 | 312 | 198 | 8 | 174 | 479 | 56 | 349 | 3.00e-20 | 92.4 |
| Msa0378390 | AT2G36590.1 | 25.126 | 398 | 245 | 16 | 44 | 430 | 30 | 385 | 3.50e-19 | 90.1 |
| Msa0378390 | AT2G39890.2 | 23.142 | 471 | 313 | 17 | 17 | 479 | 11 | 440 | 4.32e-19 | 90.1 |
| Msa0378390 | AT2G39890.1 | 23.142 | 471 | 313 | 17 | 17 | 479 | 11 | 440 | 4.32e-19 | 90.1 |
| Msa0378390 | AT2G39890.3 | 23.501 | 417 | 274 | 14 | 69 | 479 | 4 | 381 | 6.33e-18 | 85.9 |
| Msa0378390 | AT4G35180.1 | 23.077 | 442 | 293 | 10 | 21 | 444 | 30 | 442 | 7.57e-12 | 67.8 |
Find 160 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAATTCTCTGTCAATTT+TGG | 0.067119 | 3_1:+79148858 | None:intergenic |
| TGATTGGGGCATTGGGATTT+TGG | 0.112131 | 3_1:-79148711 | Msa0378390:CDS |
| ATCCACTTCCTACTCCATTT+TGG | 0.128680 | 3_1:+79148637 | None:intergenic |
| CGTTGTGGTGACACCGAATT+TGG | 0.176572 | 3_1:-79151630 | Msa0378390:CDS |
| GTACTTCTGCAGGAAATATT+TGG | 0.182217 | 3_1:-79148135 | Msa0378390:three_prime_UTR |
| ATCTTCGTGGTCTATCTTAA+TGG | 0.227125 | 3_1:-79148215 | Msa0378390:three_prime_UTR |
| GCCATCATCGTCATAGTATT+TGG | 0.231930 | 3_1:+79151922 | None:intergenic |
| TTCATTTACAGACGCCTAAT+TGG | 0.231959 | 3_1:-79153958 | Msa0378390:five_prime_UTR |
| TTGCATTCAAGAAGAATAAT+TGG | 0.259206 | 3_1:-79148382 | Msa0378390:three_prime_UTR |
| CTTTCTCGACGAAGGCAAAT+AGG | 0.260797 | 3_1:+79148899 | None:intergenic |
| TCTTCGTGGTCTATCTTAAT+GGG | 0.270464 | 3_1:-79148214 | Msa0378390:three_prime_UTR |
| GATGGTTGTCACGGTCTTCT+TGG | 0.282987 | 3_1:-79148440 | Msa0378390:three_prime_UTR |
| AAGATACAACACAAATAAAA+TGG | 0.292708 | 3_1:+79148233 | None:intergenic |
| GCTCAGATGGGTTGGATTGC+TGG | 0.293758 | 3_1:-79151720 | Msa0378390:CDS |
| ACAGGAAAGTAAACAGTTAA+AGG | 0.298387 | 3_1:+79148688 | None:intergenic |
| AAAACATATTTACGTTAGTT+TGG | 0.301907 | 3_1:-79148804 | Msa0378390:CDS |
| GGGAACCTGCTCGCCGGATT+TGG | 0.301956 | 3_1:-79149009 | Msa0378390:CDS |
| TAAAATCTATTGCCTCCTTC+TGG | 0.312586 | 3_1:-79148488 | Msa0378390:three_prime_UTR |
| TGCATGGGATATGCTGCTTT+TGG | 0.316047 | 3_1:-79149045 | Msa0378390:CDS |
| GTATCTATTGTGGCTGGTCT+TGG | 0.319531 | 3_1:-79148580 | Msa0378390:CDS |
| TGGTGTCTCAAAAGCATATT+GGG | 0.324806 | 3_1:-79148989 | Msa0378390:CDS |
| CTTGGAATTTCCAAAGTTGC+AGG | 0.329872 | 3_1:-79150135 | Msa0378390:intron |
| GGAAATATTTGGAGCCTTGA+TGG | 0.330090 | 3_1:-79148124 | Msa0378390:three_prime_UTR |
| AATAGAAAACGGTACTGTTA+TGG | 0.340529 | 3_1:-79149840 | Msa0378390:intron |
| GAGTAGGAAGTGGATTATTC+TGG | 0.341119 | 3_1:-79148629 | Msa0378390:CDS |
| TTTCTCGACGAAGGCAAATA+GGG | 0.341560 | 3_1:+79148900 | None:intergenic |
| ATAGTTTCTCTTTCCAAATT+CGG | 0.343023 | 3_1:+79151617 | None:intergenic |
| TTCTTCTTGAATGCAACTTC+GGG | 0.345008 | 3_1:+79148389 | None:intergenic |
| TTTGGGAGTGATTGGGGCAT+TGG | 0.355425 | 3_1:-79148719 | Msa0378390:CDS |
| AACCCATACATGATAGCTTT+TGG | 0.357510 | 3_1:-79150264 | Msa0378390:CDS |
| GATGCAGTTAGTAACATTCT+TGG | 0.359420 | 3_1:-79151585 | Msa0378390:intron |
| ACGATGATGGCCGTGTTAAA+CGG | 0.361196 | 3_1:-79151910 | Msa0378390:CDS |
| AAAGAGAAACTATACTTTCA+TGG | 0.361574 | 3_1:-79151607 | Msa0378390:CDS |
| TGTGGCTGGTCTTGGCTCAT+TGG | 0.362801 | 3_1:-79148572 | Msa0378390:CDS |
| TCCACAATTGCTCTTGCTCT+TGG | 0.363333 | 3_1:-79150153 | Msa0378390:CDS |
| TACAAATGAAGATCCCAAAA+TGG | 0.364992 | 3_1:-79148651 | Msa0378390:CDS |
| TTGGCTCATTGGTCGGTGTC+TGG | 0.365007 | 3_1:-79148561 | Msa0378390:CDS |
| ACACTTGGTATGCTCCAAAA+AGG | 0.366510 | 3_1:+79148932 | None:intergenic |
| TTGGGAGTGATTGGGGCATT+GGG | 0.373067 | 3_1:-79148718 | Msa0378390:CDS |
| TGCAGCAATTAGGTAGGAAT+TGG | 0.373886 | 3_1:+79153553 | None:intergenic |
| ATTTCAGAATCTCTCACTCT+TGG | 0.374704 | 3_1:-79153613 | Msa0378390:intron |
| AAAGACGCATGTCATATTTC+AGG | 0.375996 | 3_1:-79150288 | Msa0378390:CDS |
| ATAACAGCTGTGATAGGATC+TGG | 0.377729 | 3_1:-79151768 | Msa0378390:CDS |
| TGATTTAGTACCAATGGTAT+TGG | 0.380556 | 3_1:+79148310 | None:intergenic |
| CACCACATGTTATGAAAATC+TGG | 0.392967 | 3_1:+79150213 | None:intergenic |
| AGGTATATAACCTGCAACTT+TGG | 0.398196 | 3_1:+79150125 | None:intergenic |
| ACGCCAAAAGCTATCATGTA+TGG | 0.400343 | 3_1:+79150261 | None:intergenic |
| TGTGGCCATGTCTGCATCCC+AGG | 0.402671 | 3_1:-79148187 | Msa0378390:three_prime_UTR |
| TTGGTGTCTCAAAAGCATAT+TGG | 0.403668 | 3_1:-79148990 | Msa0378390:CDS |
| TTATTTGTGTTGTATCTTCG+TGG | 0.405006 | 3_1:-79148228 | Msa0378390:three_prime_UTR |
| ATAGAAAACGGTACTGTTAT+GGG | 0.405404 | 3_1:-79149839 | Msa0378390:intron |
| GTGGAGTCGGCGGTCCAATT+AGG | 0.406438 | 3_1:+79153944 | None:intergenic |
| ATGGTTGTCACGGTCTTCTT+GGG | 0.408530 | 3_1:-79148439 | Msa0378390:three_prime_UTR |
| AACGAAAATGTGCAGCAATT+AGG | 0.415145 | 3_1:+79153543 | None:intergenic |
| TCAAACTTTATAGAGAGATC+AGG | 0.419783 | 3_1:-79153588 | Msa0378390:five_prime_UTR |
| AAAGGTGTACCTGAATTTCC+AGG | 0.430716 | 3_1:+79149708 | None:intergenic |
| ATGGGTTGGATTGCTGGTCC+TGG | 0.431751 | 3_1:-79151714 | Msa0378390:CDS |
| ATTCTTCTTGAATGCAACTT+CGG | 0.436362 | 3_1:+79148388 | None:intergenic |
| TTGGGATCTTATTTCATAAG+TGG | 0.437854 | 3_1:-79148421 | Msa0378390:three_prime_UTR |
| GTTATAATTGATGCTGTGAT+AGG | 0.438753 | 3_1:-79148279 | Msa0378390:three_prime_UTR |
| GGTCTATAGCTCAGATGGGT+TGG | 0.444852 | 3_1:-79151728 | Msa0378390:CDS |
| CTGGGGTGCTCTCCTTAGCC+TGG | 0.452285 | 3_1:-79151749 | Msa0378390:CDS |
| GGGCCCAGTGTTAAGATTTG+TGG | 0.452949 | 3_1:-79151324 | Msa0378390:CDS |
| GAAAATCTGGAATTTGAGAA+AGG | 0.460822 | 3_1:+79150226 | None:intergenic |
| ACCACTAGGCAGCCGCCTTG+TGG | 0.468871 | 3_1:+79153925 | None:intergenic |
| AGCCTGGTCTATAGCTCAGA+TGG | 0.469391 | 3_1:-79151733 | Msa0378390:CDS |
| CTGCCTCATTGTATCTATTG+TGG | 0.469595 | 3_1:-79148590 | Msa0378390:CDS |
| CTCATTGTATCTATTGTGGC+TGG | 0.472707 | 3_1:-79148586 | Msa0378390:CDS |
| TTATCTGCTCTGTGGCTGCA+TGG | 0.476635 | 3_1:-79149061 | Msa0378390:CDS |
| GAATTCAAAGTTAAAATCCC+TGG | 0.478084 | 3_1:-79148844 | Msa0378390:CDS |
| TTATGTGTCCATACCTCTGA+TGG | 0.478499 | 3_1:-79150312 | Msa0378390:CDS |
| ACTACGTGTAAGTGGAGGCC+TGG | 0.480806 | 3_1:+79148169 | None:intergenic |
| ACTGTTATGGGTAGCCTCAC+AGG | 0.482753 | 3_1:-79149827 | Msa0378390:CDS |
| GACGAAGGCAAATAGGGGTT+GGG | 0.484362 | 3_1:+79148906 | None:intergenic |
| AAGATGGTAGAACACTCTTC+CGG | 0.487867 | 3_1:-79152007 | Msa0378390:CDS |
| CACATTATAACAGCTGTGAT+AGG | 0.489553 | 3_1:-79151774 | Msa0378390:CDS |
| TTAATTTGTACCAATACCAT+TGG | 0.490079 | 3_1:-79148320 | Msa0378390:three_prime_UTR |
| GGCCCAGTGTTAAGATTTGT+GGG | 0.490344 | 3_1:-79151323 | Msa0378390:CDS |
| TCCAAGAGCAAGAGCAATTG+TGG | 0.490585 | 3_1:+79150152 | None:intergenic |
| GTTTAATTCGATAAGCTGAA+TGG | 0.491434 | 3_1:+79148517 | None:intergenic |
| ATTTGCCTTCGTCGAGAAAG+AGG | 0.492276 | 3_1:-79148896 | Msa0378390:CDS |
| AATCCGGCGAGCAGGTTCCC+TGG | 0.492450 | 3_1:+79149012 | None:intergenic |
| TGAATGGTTTGTATTTCTGC+AGG | 0.492604 | 3_1:+79148533 | None:intergenic |
| ACATATTTACGTTAGTTTGG+AGG | 0.492783 | 3_1:-79148801 | Msa0378390:CDS |
| CAATATCTCCACGGTAGCTA+AGG | 0.493540 | 3_1:+79151978 | None:intergenic |
| GAAACTTATGTGGGAGGTGA+TGG | 0.494098 | 3_1:-79148458 | Msa0378390:three_prime_UTR |
| AGCGTGAATTGCAGCGGCAG+TGG | 0.495378 | 3_1:-79153982 | Msa0378390:five_prime_UTR |
| TGCTGCCTCTTTCTCGACGA+AGG | 0.495845 | 3_1:+79148891 | None:intergenic |
| CAAAATCTACGTACTTCTGC+AGG | 0.497196 | 3_1:-79148145 | Msa0378390:three_prime_UTR |
| CGACGAAGGCAAATAGGGGT+TGG | 0.498834 | 3_1:+79148905 | None:intergenic |
| TTTAACTGTTTACTTTCCTG+TGG | 0.499525 | 3_1:-79148686 | Msa0378390:CDS |
| TATCTGCTCTGTGGCTGCAT+GGG | 0.499617 | 3_1:-79149060 | Msa0378390:CDS |
| AGCTACCGTGGAGATATTGT+TGG | 0.499909 | 3_1:-79151974 | Msa0378390:CDS |
| TCCCAAAATGGAGTAGGAAG+TGG | 0.501131 | 3_1:-79148639 | Msa0378390:CDS |
| CATTTATGATTTAGTACCAA+TGG | 0.504869 | 3_1:+79148304 | None:intergenic |
| ACGGTAGCTAAGGTTGGTTC+CGG | 0.506142 | 3_1:+79151988 | None:intergenic |
| AGGCGATGTTTCCAAGACCT+TGG | 0.513092 | 3_1:+79149756 | None:intergenic |
| TGGAATGTAAGAAACTTATG+TGG | 0.520890 | 3_1:-79148468 | Msa0378390:three_prime_UTR |
| AGACACCAAATCCGGCGAGC+AGG | 0.523063 | 3_1:+79149004 | None:intergenic |
| TAACAGCTGTGATAGGATCT+GGG | 0.524232 | 3_1:-79151767 | Msa0378390:CDS |
| AGGCAGCCGCCTTGTGGAGT+CGG | 0.524356 | 3_1:+79153931 | None:intergenic |
| TCCAAATACTATGACGATGA+TGG | 0.532295 | 3_1:-79151923 | Msa0378390:CDS |
| TGACTGTAGACTGGCAAACC+AGG | 0.534144 | 3_1:+79148826 | None:intergenic |
| GCTGGTCTTGGCTCATTGGT+CGG | 0.537162 | 3_1:-79148568 | Msa0378390:CDS |
| GGAGGCCTGGGATGCAGACA+TGG | 0.538651 | 3_1:+79148182 | None:intergenic |
| CTCGCTGATTGTTATCGTTG+TGG | 0.546122 | 3_1:-79151645 | Msa0378390:CDS |
| CGCCAAAAGCTATCATGTAT+GGG | 0.549420 | 3_1:+79150262 | None:intergenic |
| CTACGTGTAAGTGGAGGCCT+GGG | 0.549747 | 3_1:+79148170 | None:intergenic |
| CATAGTATATCCATAAAAGA+TGG | 0.550433 | 3_1:-79152023 | Msa0378390:intron |
| CAAACTTTATAGAGAGATCA+GGG | 0.555815 | 3_1:-79153587 | Msa0378390:five_prime_UTR |
| GTGGGAGCATGTAGTCCAAA+CGG | 0.556209 | 3_1:+79151794 | None:intergenic |
| CTGCCTAGTGGTGAGGTAGT+CGG | 0.556528 | 3_1:-79153914 | Msa0378390:five_prime_UTR |
| TGGAGATATTGTTGGCATTG+AGG | 0.559066 | 3_1:-79151966 | Msa0378390:CDS |
| ATAGGGGTTGGGCATACACT+TGG | 0.560213 | 3_1:+79148917 | None:intergenic |
| GGGAATGAATAATTCCATCA+AGG | 0.562148 | 3_1:+79148110 | None:intergenic |
| AATCTGAGTCAGGAACCGTT+TGG | 0.563153 | 3_1:-79151809 | Msa0378390:intron |
| TAAGTTTCTTACATTCCAGA+AGG | 0.564332 | 3_1:+79148473 | None:intergenic |
| GCGCCAGGGAACCTGCTCGC+CGG | 0.570329 | 3_1:-79149015 | Msa0378390:CDS |
| TATCCCACAAATCTTAACAC+TGG | 0.570920 | 3_1:+79151320 | None:intergenic |
| GATGGCCGTGTTAAACGGAC+AGG | 0.572114 | 3_1:-79151905 | Msa0378390:intron |
| GTTTCTTACATTCCAGAAGG+AGG | 0.573257 | 3_1:+79148476 | None:intergenic |
| CTATCACAGCTGTTATAATG+TGG | 0.579458 | 3_1:+79151775 | None:intergenic |
| TGAAGATCCCAAAATGGAGT+AGG | 0.579767 | 3_1:-79148645 | Msa0378390:CDS |
| ATCAAATCTCCACCATCAGA+AGG | 0.581249 | 3_1:-79149135 | Msa0378390:CDS |
| GCCTGGTCTATAGCTCAGAT+GGG | 0.582657 | 3_1:-79151732 | Msa0378390:CDS |
| ATCTCCACGGTAGCTAAGGT+TGG | 0.584583 | 3_1:+79151982 | None:intergenic |
| GATATTGTTGGCATTGAGGA+TGG | 0.590897 | 3_1:-79151962 | Msa0378390:CDS |
| TTGGTACTAAATCATAAATG+AGG | 0.591014 | 3_1:-79148301 | Msa0378390:three_prime_UTR |
| CTTAACTCACATCATGCTCA+TGG | 0.591519 | 3_1:+79151245 | None:intergenic |
| ATCCCACAAATCTTAACACT+GGG | 0.591549 | 3_1:+79151321 | None:intergenic |
| TATCACAGCTGTTATAATGT+GGG | 0.593327 | 3_1:+79151776 | None:intergenic |
| TCTATCTTAATGGGGTCATG+TGG | 0.597322 | 3_1:-79148205 | Msa0378390:three_prime_UTR |
| TCGCCGACTACCTCACCACT+AGG | 0.598683 | 3_1:+79153911 | None:intergenic |
| AAAATGTGCAGCAATTAGGT+AGG | 0.598754 | 3_1:+79153547 | None:intergenic |
| ATTGGACCGCCGACTCCACA+AGG | 0.600644 | 3_1:-79153940 | Msa0378390:five_prime_UTR |
| TTCTCGACGAAGGCAAATAG+GGG | 0.607159 | 3_1:+79148901 | None:intergenic |
| TCCACAAGGCGGCTGCCTAG+TGG | 0.608268 | 3_1:-79153926 | Msa0378390:five_prime_UTR |
| GACTGTAGACTGGCAAACCA+GGG | 0.610020 | 3_1:+79148827 | None:intergenic |
| TTATACCTGTCCGTTTAACA+CGG | 0.610345 | 3_1:+79151900 | None:intergenic |
| AAGGCGGCTGCCTAGTGGTG+AGG | 0.610367 | 3_1:-79153921 | Msa0378390:five_prime_UTR |
| AATCAACATTGCGATGAGAG+TGG | 0.611911 | 3_1:+79148759 | None:intergenic |
| CTGAGCTATAGACCAGGCTA+AGG | 0.616886 | 3_1:+79151737 | None:intergenic |
| TGTACGATATACATCTCCAC+AGG | 0.631987 | 3_1:+79148670 | None:intergenic |
| AAGCGTCGGAACAGTGACCC+CGG | 0.633976 | 3_1:-79149801 | Msa0378390:CDS |
| AAAAGAATATGAATAAGCAA+AGG | 0.634204 | 3_1:+79149736 | None:intergenic |
| ACCCATCTGAGCTATAGACC+AGG | 0.634300 | 3_1:+79151731 | None:intergenic |
| CTTCGTGGTCTATCTTAATG+GGG | 0.634365 | 3_1:-79148213 | Msa0378390:three_prime_UTR |
| GGAATGTAAGAAACTTATGT+GGG | 0.635634 | 3_1:-79148467 | Msa0378390:three_prime_UTR |
| GTGGGAGGTGATGGTTGTCA+CGG | 0.637126 | 3_1:-79148449 | Msa0378390:three_prime_UTR |
| CAGCCGCCTTGTGGAGTCGG+CGG | 0.641708 | 3_1:+79153934 | None:intergenic |
| AGCCTCACAGGAGTAAGCGT+CGG | 0.646014 | 3_1:-79149815 | Msa0378390:CDS |
| AACAGCTGTGATAGGATCTG+GGG | 0.646224 | 3_1:-79151766 | Msa0378390:CDS |
| CAATGCCAACAATATCTCCA+CGG | 0.659764 | 3_1:+79151969 | None:intergenic |
| GGAACCAACCTTAGCTACCG+TGG | 0.665944 | 3_1:-79151986 | Msa0378390:CDS |
| TTTGAACTACGTGTAAGTGG+AGG | 0.679550 | 3_1:+79148164 | None:intergenic |
| TGTTGAAGCGTGAATTGCAG+CGG | 0.681101 | 3_1:-79153988 | None:intergenic |
| TTCCGACGCTTACTCCTGTG+AGG | 0.685835 | 3_1:+79149813 | None:intergenic |
| CAGCCACAATAGATACAATG+AGG | 0.686773 | 3_1:+79148587 | None:intergenic |
| ATGTAAGAAACTTATGTGGG+AGG | 0.688654 | 3_1:-79148464 | Msa0378390:three_prime_UTR |
| GGACCGCCGACTCCACAAGG+CGG | 0.742099 | 3_1:-79153937 | Msa0378390:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATACAAAATATTTTTTTG+TGG | - | chr3_1:79149355-79149374 | Msa0378390:intron | 10.0% |
| !!! | TTTGATTAAATTTTAAGAAA+CGG | + | chr3_1:79149810-79149829 | None:intergenic | 10.0% |
| !!! | AAAAAAAAATCATCTTATTT+CGG | + | chr3_1:79150959-79150978 | None:intergenic | 10.0% |
| !!! | ATTTTTTACAAATAGATTAA+AGG | + | chr3_1:79152405-79152424 | None:intergenic | 10.0% |
| !! | TATTAAAATTTAACATGATT+TGG | + | chr3_1:79152450-79152469 | None:intergenic | 10.0% |
| !!! | AATTTTTGTACTTTTGATAT+CGG | + | chr3_1:79148211-79148230 | None:intergenic | 15.0% |
| !! | AACTTATATTAACATCATAA+AGG | + | chr3_1:79148393-79148412 | None:intergenic | 15.0% |
| !! | TATTTAGTATACTATTTAGT+TGG | - | chr3_1:79149169-79149188 | Msa0378390:intron | 15.0% |
| !!! | TTCTATTGAATTTTAAGAAA+TGG | + | chr3_1:79149855-79149874 | None:intergenic | 15.0% |
| !!! | TTGAAGTTATATTTTCTTTA+AGG | - | chr3_1:79151143-79151162 | Msa0378390:intron | 15.0% |
| !!! | TGAAGTTATATTTTCTTTAA+GGG | - | chr3_1:79151144-79151163 | Msa0378390:intron | 15.0% |
| !! | AAAACACAAAATTAAAGAAA+GGG | + | chr3_1:79151349-79151368 | None:intergenic | 15.0% |
| !!! | ACAAATTTTCACTTAATTTT+TGG | - | chr3_1:79152007-79152026 | Msa0378390:CDS | 15.0% |
| !!! | TTTATCTAATTTTGTTCAAT+TGG | - | chr3_1:79152223-79152242 | Msa0378390:intron | 15.0% |
| !!! | TTATAACCTCTTTATTTTTA+AGG | - | chr3_1:79152596-79152615 | Msa0378390:intron | 15.0% |
| !!! | GTTATTTTTAACTTCTAAAA+TGG | + | chr3_1:79152662-79152681 | None:intergenic | 15.0% |
| !!! | AATATAAGTTTCATTTTCAG+TGG | - | chr3_1:79148403-79148422 | Msa0378390:three_prime_UTR | 20.0% |
| !!! | ACTCTGTTTTTGTTTTAATT+TGG | - | chr3_1:79148590-79148609 | Msa0378390:CDS | 20.0% |
| !!! | ATGATTTTTAATTCGTTGTT+TGG | - | chr3_1:79148619-79148638 | Msa0378390:CDS | 20.0% |
| !! | ACTTCCTTAATAACAATATT+TGG | + | chr3_1:79148871-79148890 | None:intergenic | 20.0% |
| !!! | AAGGAAGTTTTGTTTTTATT+TGG | - | chr3_1:79148883-79148902 | Msa0378390:CDS | 20.0% |
| !! | GTTTAACGTTAAATTTAAGA+AGG | - | chr3_1:79148978-79148997 | Msa0378390:CDS | 20.0% |
| !! | TAGTATACTAAATACATACA+CGG | + | chr3_1:79149163-79149182 | None:intergenic | 20.0% |
| !! | TTAAACGACAAAATTACAAA+GGG | - | chr3_1:79149501-79149520 | Msa0378390:intron | 20.0% |
| !! | TTACAAAACAATTTATCACA+TGG | + | chr3_1:79150563-79150582 | None:intergenic | 20.0% |
| !!! | GATGATTTTTTTTTTGCTAT+TGG | - | chr3_1:79150965-79150984 | Msa0378390:intron | 20.0% |
| !!! | TAGAAAAAGTTTCTTCTTTT+AGG | + | chr3_1:79151208-79151227 | None:intergenic | 20.0% |
| !! | CAAAACACAAAATTAAAGAA+AGG | + | chr3_1:79151350-79151369 | None:intergenic | 20.0% |
| !!! | TTCTTTAATTTTGTGTTTTG+TGG | - | chr3_1:79151350-79151369 | Msa0378390:intron | 20.0% |
| !!! | TCTTTAATTTTGTGTTTTGT+GGG | - | chr3_1:79151351-79151370 | Msa0378390:intron | 20.0% |
| !! | AATTGGAATATATTGAAGTA+TGG | + | chr3_1:79151528-79151547 | None:intergenic | 20.0% |
| !!! | TATTATCTAGCTTGATTAAT+TGG | + | chr3_1:79151545-79151564 | None:intergenic | 20.0% |
| !! | TGATATATGGTTATATAGTT+TGG | - | chr3_1:79151682-79151701 | Msa0378390:CDS | 20.0% |
| !!! | TAATTTTGTTCAATTGGTTA+TGG | - | chr3_1:79152229-79152248 | Msa0378390:intron | 20.0% |
| !! | AAAAGAATATGAATAAGCAA+AGG | + | chr3_1:79152359-79152378 | None:intergenic | 20.0% |
| !! | AAAACACCTTAAAAATAAAG+AGG | + | chr3_1:79152605-79152624 | None:intergenic | 20.0% |
| !!! | AGATTAGACATTAATTTGTT+TGG | + | chr3_1:79152921-79152940 | None:intergenic | 20.0% |
| !! | AAAACATATTTACGTTAGTT+TGG | - | chr3_1:79153288-79153307 | Msa0378390:intron | 20.0% |
| !! | AAGATACAACACAAATAAAA+TGG | + | chr3_1:79153862-79153881 | None:intergenic | 20.0% |
| !! | TCAAAAGTACAAAAATTCTC+TGG | - | chr3_1:79148214-79148233 | Msa0378390:three_prime_UTR | 25.0% |
| ! | TGAAATTGCAAATTGCAAAT+TGG | + | chr3_1:79148465-79148484 | None:intergenic | 25.0% |
| !!! | TTTTAATTCGTTGTTTGGAT+TGG | - | chr3_1:79148624-79148643 | Msa0378390:CDS | 25.0% |
| !! | GTCTCCAAATATTGTTATTA+AGG | - | chr3_1:79148864-79148883 | Msa0378390:CDS | 25.0% |
| !! | ATTTAAGAAGGTACAAATTG+CGG | - | chr3_1:79148990-79149009 | Msa0378390:CDS | 25.0% |
| !!! | AACAGGGATTTTATTTTTTG+TGG | - | chr3_1:79149207-79149226 | Msa0378390:intron | 25.0% |
| !!! | ACAGGGATTTTATTTTTTGT+GGG | - | chr3_1:79149208-79149227 | Msa0378390:intron | 25.0% |
| !! | TGGAATGATCTTTTATTGAA+GGG | - | chr3_1:79149375-79149394 | Msa0378390:intron | 25.0% |
| ! | GTTAAACGACAAAATTACAA+AGG | - | chr3_1:79149500-79149519 | Msa0378390:intron | 25.0% |
| ! | GTAGATGATTATCAAAATCT+GGG | + | chr3_1:79149660-79149679 | None:intergenic | 25.0% |
| ! | AGTAGATGATTATCAAAATC+TGG | + | chr3_1:79149661-79149680 | None:intergenic | 25.0% |
| ! | TGATAATCATCTACTCTAAA+TGG | - | chr3_1:79149666-79149685 | Msa0378390:intron | 25.0% |
| ! | TTAATCTGAACTTTCTCATA+AGG | - | chr3_1:79149781-79149800 | Msa0378390:CDS | 25.0% |
| ! | TTAAGAAATGGAAACCTTAT+GGG | + | chr3_1:79149843-79149862 | None:intergenic | 25.0% |
| ! | TTTAAGAAATGGAAACCTTA+TGG | + | chr3_1:79149844-79149863 | None:intergenic | 25.0% |
| !! | CATCTTTTATGGATATACTA+TGG | + | chr3_1:79150071-79150090 | None:intergenic | 25.0% |
| ! | CATAGTATATCCATAAAAGA+TGG | - | chr3_1:79150069-79150088 | Msa0378390:intron | 25.0% |
| ! | ATAGTTTCTCTTTCCAAATT+CGG | + | chr3_1:79150478-79150497 | None:intergenic | 25.0% |
| ! | AAAGAGAAACTATACTTTCA+TGG | - | chr3_1:79150485-79150504 | Msa0378390:intron | 25.0% |
| !! | GTTCAGTATTTGAATCTTTT+CGG | - | chr3_1:79150795-79150814 | Msa0378390:intron | 25.0% |
| ! | GTGTTTGTTTGTGTTTAATT+GGG | + | chr3_1:79151009-79151028 | None:intergenic | 25.0% |
| ! | TGTGTTTGTTTGTGTTTAAT+TGG | + | chr3_1:79151010-79151029 | None:intergenic | 25.0% |
| !!! | GTTTTAAATTGCACTGTAAA+TGG | + | chr3_1:79151506-79151525 | None:intergenic | 25.0% |
| ! | GATAATATTAATTCTGTTGC+TGG | - | chr3_1:79151558-79151577 | Msa0378390:intron | 25.0% |
| ! | CATTTCTTTCTACTGATATA+TGG | - | chr3_1:79151669-79151688 | Msa0378390:CDS | 25.0% |
| ! | ATTGGTTATGGAATAGAAAA+CGG | - | chr3_1:79152241-79152260 | Msa0378390:intron | 25.0% |
| ! | CATTAGTAAGTAATCTATAG+GGG | + | chr3_1:79152525-79152544 | None:intergenic | 25.0% |
| ! | GCATTAGTAAGTAATCTATA+GGG | + | chr3_1:79152526-79152545 | None:intergenic | 25.0% |
| ! | AGCATTAGTAAGTAATCTAT+AGG | + | chr3_1:79152527-79152546 | None:intergenic | 25.0% |
| ! | AGATTACTTACTAATGCTAT+AGG | - | chr3_1:79152529-79152548 | Msa0378390:intron | 25.0% |
| ! | AATTCTTCTTATCAGTACTT+AGG | + | chr3_1:79152722-79152741 | None:intergenic | 25.0% |
| ! | TAACTATTAAGGCTATATCT+TGG | + | chr3_1:79152747-79152766 | None:intergenic | 25.0% |
| !! | AGATATAGCCTTAATAGTTA+AGG | - | chr3_1:79152747-79152766 | Msa0378390:intron | 25.0% |
| !! | GATATAGCCTTAATAGTTAA+GGG | - | chr3_1:79152748-79152767 | Msa0378390:intron | 25.0% |
| ! | AATGTCTAATCTAATTACAC+AGG | - | chr3_1:79152929-79152948 | Msa0378390:intron | 25.0% |
| !! | TTGAATTCTCTGTCAATTTT+GGG | + | chr3_1:79153236-79153255 | None:intergenic | 25.0% |
| !! | TTTGAATTCTCTGTCAATTT+TGG | + | chr3_1:79153237-79153256 | None:intergenic | 25.0% |
| ! | TTGCATTCAAGAAGAATAAT+TGG | - | chr3_1:79153710-79153729 | Msa0378390:intron | 25.0% |
| !!! | TTAATTTGTACCAATACCAT+TGG | - | chr3_1:79153772-79153791 | Msa0378390:intron | 25.0% |
| ! | CATTTATGATTTAGTACCAA+TGG | + | chr3_1:79153791-79153810 | None:intergenic | 25.0% |
| ! | TTGGTACTAAATCATAAATG+AGG | - | chr3_1:79153791-79153810 | Msa0378390:intron | 25.0% |
| !!! | TCTCTTTTAATTTTGACCAC+TGG | - | chr3_1:79148296-79148315 | Msa0378390:three_prime_UTR | 30.0% |
| TCAAACTTTATAGAGAGATC+AGG | - | chr3_1:79148504-79148523 | Msa0378390:exon | 30.0% | |
| CAAACTTTATAGAGAGATCA+GGG | - | chr3_1:79148505-79148524 | Msa0378390:exon | 30.0% | |
| TAAAACAAAAACAGAGTGTG+TGG | + | chr3_1:79148587-79148606 | None:intergenic | 30.0% | |
| !! | CTGAACTTAACTTGTTAATC+TGG | - | chr3_1:79148715-79148734 | Msa0378390:CDS | 30.0% |
| !! | CTTAACTTGTTAATCTGGTT+TGG | - | chr3_1:79148720-79148739 | Msa0378390:CDS | 30.0% |
| !! | TTTTCTGTTTCTTTATGACC+TGG | - | chr3_1:79148759-79148778 | Msa0378390:CDS | 30.0% |
| ! | TTTCTGTTTCTTTATGACCT+GGG | - | chr3_1:79148760-79148779 | Msa0378390:CDS | 30.0% |
| CACACAAACACATTTAATAC+AGG | - | chr3_1:79149051-79149070 | Msa0378390:CDS | 30.0% | |
| AAATACATACACGGAATGAT+AGG | + | chr3_1:79149154-79149173 | None:intergenic | 30.0% | |
| ATACTATTTAGTTGGTCAGT+TGG | - | chr3_1:79149177-79149196 | Msa0378390:intron | 30.0% | |
| TACTATTTAGTTGGTCAGTT+GGG | - | chr3_1:79149178-79149197 | Msa0378390:intron | 30.0% | |
| ! | TGGGATGATCTTTTATACAA+GGG | - | chr3_1:79149227-79149246 | Msa0378390:intron | 30.0% |
| ! | GATCTTTTATACAAGGGATT+TGG | - | chr3_1:79149233-79149252 | Msa0378390:intron | 30.0% |
| ! | GTGGAATGATCTTTTATTGA+AGG | - | chr3_1:79149374-79149393 | Msa0378390:intron | 30.0% |
| ! | GATCTTTTATTGAAGGGATT+TGG | - | chr3_1:79149381-79149400 | Msa0378390:intron | 30.0% |
| ACAAAATTACAAAGGGAACA+TGG | - | chr3_1:79149508-79149527 | Msa0378390:intron | 30.0% | |
| ATTTATCCGGCAAAGAAAAA+GGG | - | chr3_1:79149581-79149600 | Msa0378390:intron | 30.0% | |
| ! | ATGGTTATTTGCTTCTGAAA+TGG | + | chr3_1:79149722-79149741 | None:intergenic | 30.0% |
| ! | CACTCATTTTGCCAAAATTT+TGG | - | chr3_1:79149745-79149764 | Msa0378390:CDS | 30.0% |
| TTCAGATTAAAAATCCCAAG+TGG | + | chr3_1:79149771-79149790 | None:intergenic | 30.0% | |
| CAAATTTGAACTTTCCCATA+AGG | - | chr3_1:79149826-79149845 | Msa0378390:CDS | 30.0% | |
| TATTGGAATAGATCGGTTAT+CGG | + | chr3_1:79149904-79149923 | None:intergenic | 30.0% | |
| ! | TGTGTAGTATTGGAATAGAT+CGG | + | chr3_1:79149911-79149930 | None:intergenic | 30.0% |
| TCAAGTAAACTGTGTAGTAT+TGG | + | chr3_1:79149921-79149940 | None:intergenic | 30.0% | |
| ! | TTTTATGGATATACTATGGC+AGG | + | chr3_1:79150067-79150086 | None:intergenic | 30.0% |
| AATATCATATCACCGAATCA+AGG | + | chr3_1:79150254-79150273 | None:intergenic | 30.0% | |
| TATCACAGCTGTTATAATGT+GGG | + | chr3_1:79150319-79150338 | None:intergenic | 30.0% | |
| GATGATGCTGAAAAATATCA+TGG | + | chr3_1:79150406-79150425 | None:intergenic | 30.0% | |
| AACTACAGACATAGAAACTT+GGG | + | chr3_1:79150636-79150655 | None:intergenic | 30.0% | |
| ACACGTTATAATGCATGTTA+TGG | + | chr3_1:79150739-79150758 | None:intergenic | 30.0% | |
| !! | TTGTTTGAATCAGCTGATTT+TGG | - | chr3_1:79151734-79151753 | Msa0378390:CDS | 30.0% |
| ! | GAAAATCTGGAATTTGAGAA+AGG | + | chr3_1:79151869-79151888 | None:intergenic | 30.0% |
| ! | TTCCAGATTTTCATAACATG+TGG | - | chr3_1:79151877-79151896 | Msa0378390:intron | 30.0% |
| TGTATCGAACAAATTGAAGT+AGG | + | chr3_1:79151990-79152009 | None:intergenic | 30.0% | |
| CTATAGTTCAAGACTTCAAA+GGG | + | chr3_1:79152054-79152073 | None:intergenic | 30.0% | |
| TTACTGCAGAAAACTTCTTA+CGG | - | chr3_1:79152076-79152095 | Msa0378390:intron | 30.0% | |
| CTTCTTACGGTTTAAAAATG+TGG | - | chr3_1:79152089-79152108 | Msa0378390:intron | 30.0% | |
| CTTGAACTTATAAACTGTGT+AGG | + | chr3_1:79152156-79152175 | None:intergenic | 30.0% | |
| AATAGAAAACGGTACTGTTA+TGG | - | chr3_1:79152252-79152271 | Msa0378390:intron | 30.0% | |
| ATAGAAAACGGTACTGTTAT+GGG | - | chr3_1:79152253-79152272 | Msa0378390:intron | 30.0% | |
| ! | TTCATATTCTTTTGTTCTCC+TGG | - | chr3_1:79152366-79152385 | Msa0378390:intron | 30.0% |
| AAAAAACCTTTAGCATGTGA+GGG | + | chr3_1:79152565-79152584 | None:intergenic | 30.0% | |
| TAAAAAACCTTTAGCATGTG+AGG | + | chr3_1:79152566-79152585 | None:intergenic | 30.0% | |
| ATATGCACCCTTAACTATTA+AGG | + | chr3_1:79152758-79152777 | None:intergenic | 30.0% | |
| ! | AATAGTTAAGGGTGCATATT+AGG | - | chr3_1:79152759-79152778 | Msa0378390:intron | 30.0% |
| !! | CAACATGTAAGTGATTTGTT+TGG | + | chr3_1:79152862-79152881 | None:intergenic | 30.0% |
| GAATTCAAAGTTAAAATCCC+TGG | - | chr3_1:79153248-79153267 | Msa0378390:intron | 30.0% | |
| !!! | AATATGTTTTGACTGTAGAC+TGG | + | chr3_1:79153278-79153297 | None:intergenic | 30.0% |
| ! | ACATATTTACGTTAGTTTGG+AGG | - | chr3_1:79153291-79153310 | Msa0378390:intron | 30.0% |
| ACAGGAAAGTAAACAGTTAA+AGG | + | chr3_1:79153407-79153426 | None:intergenic | 30.0% | |
| TTTAACTGTTTACTTTCCTG+TGG | - | chr3_1:79153406-79153425 | Msa0378390:intron | 30.0% | |
| TACAAATGAAGATCCCAAAA+TGG | - | chr3_1:79153441-79153460 | Msa0378390:intron | 30.0% | |
| GTTTAATTCGATAAGCTGAA+TGG | + | chr3_1:79153578-79153597 | None:intergenic | 30.0% | |
| TAAGTTTCTTACATTCCAGA+AGG | + | chr3_1:79153622-79153641 | None:intergenic | 30.0% | |
| TGGAATGTAAGAAACTTATG+TGG | - | chr3_1:79153624-79153643 | Msa0378390:intron | 30.0% | |
| GGAATGTAAGAAACTTATGT+GGG | - | chr3_1:79153625-79153644 | Msa0378390:intron | 30.0% | |
| ! | TTGGGATCTTATTTCATAAG+TGG | - | chr3_1:79153671-79153690 | Msa0378390:intron | 30.0% |
| ATTCTTCTTGAATGCAACTT+CGG | + | chr3_1:79153707-79153726 | None:intergenic | 30.0% | |
| TGATTTAGTACCAATGGTAT+TGG | + | chr3_1:79153785-79153804 | None:intergenic | 30.0% | |
| GTTATAATTGATGCTGTGAT+AGG | - | chr3_1:79153813-79153832 | Msa0378390:intron | 30.0% | |
| TTATTTGTGTTGTATCTTCG+TGG | - | chr3_1:79153864-79153883 | Msa0378390:intron | 30.0% | |
| TTCATTTACAGACGCCTAAT+TGG | - | chr3_1:79148134-79148153 | Msa0378390:three_prime_UTR | 35.0% | |
| TTCACTAAAAATAGAGCCAG+TGG | + | chr3_1:79148315-79148334 | None:intergenic | 35.0% | |
| ATTTCAGAATCTCTCACTCT+TGG | - | chr3_1:79148479-79148498 | Msa0378390:three_prime_UTR | 35.0% | |
| AAAATGTGCAGCAATTAGGT+AGG | + | chr3_1:79148548-79148567 | None:intergenic | 35.0% | |
| AACGAAAATGTGCAGCAATT+AGG | + | chr3_1:79148552-79148571 | None:intergenic | 35.0% | |
| TTCTTTATGACCTGGGTAAT+TGG | - | chr3_1:79148767-79148786 | Msa0378390:CDS | 35.0% | |
| ! | ACTGATTCTTAGCATGTGTT+TGG | - | chr3_1:79148907-79148926 | Msa0378390:CDS | 35.0% |
| TTCTTAGCATGTGTTTGGAT+TGG | - | chr3_1:79148912-79148931 | Msa0378390:CDS | 35.0% | |
| AGATAACTATTGTGACGTGA+AGG | + | chr3_1:79148938-79148957 | None:intergenic | 35.0% | |
| TATCTTCTCCTTTAGACATG+CGG | + | chr3_1:79149026-79149045 | None:intergenic | 35.0% | |
| ! | TTCAATGTCAGGTTGTTACT+CGG | + | chr3_1:79149109-79149128 | None:intergenic | 35.0% |
| ! | GTGGGATGATCTTTTATACA+AGG | - | chr3_1:79149226-79149245 | Msa0378390:intron | 35.0% |
| !! | GATTTGGCTTGAGTGAAATA+AGG | - | chr3_1:79149249-79149268 | Msa0378390:intron | 35.0% |
| AAATTACAAAGGGAACATGG+AGG | - | chr3_1:79149511-79149530 | Msa0378390:intron | 35.0% | |
| AATTACAAAGGGAACATGGA+GGG | - | chr3_1:79149512-79149531 | Msa0378390:intron | 35.0% | |
| CATTTATCCGGCAAAGAAAA+AGG | - | chr3_1:79149580-79149599 | Msa0378390:intron | 35.0% | |
| TTTATCCGGCAAAGAAAAAG+GGG | - | chr3_1:79149582-79149601 | Msa0378390:intron | 35.0% | |
| ! | TTTAACTTCACTCTCAAGTG+AGG | + | chr3_1:79149621-79149640 | None:intergenic | 35.0% |
| AAGTTAAATCCCAATGTGAG+TGG | - | chr3_1:79149633-79149652 | Msa0378390:intron | 35.0% | |
| TTTGGCAAAATGAGTGTACA+TGG | + | chr3_1:79149741-79149760 | None:intergenic | 35.0% | |
| ATTGGAATAGATCGGTTATC+GGG | + | chr3_1:79149903-79149922 | None:intergenic | 35.0% | |
| AAAGCATGCACAAAAGAAAG+AGG | + | chr3_1:79149962-79149981 | None:intergenic | 35.0% | |
| ! | GAGTGTTCTACCATCTTTTA+TGG | + | chr3_1:79150082-79150101 | None:intergenic | 35.0% |
| TCCAAATACTATGACGATGA+TGG | - | chr3_1:79150169-79150188 | Msa0378390:CDS | 35.0% | |
| TTATACCTGTCCGTTTAACA+CGG | + | chr3_1:79150195-79150214 | None:intergenic | 35.0% | |
| CTATCACAGCTGTTATAATG+TGG | + | chr3_1:79150320-79150339 | None:intergenic | 35.0% | |
| CACATTATAACAGCTGTGAT+AGG | - | chr3_1:79150318-79150337 | Msa0378390:CDS | 35.0% | |
| CTGAAAAATATCATGGATCC+AGG | + | chr3_1:79150399-79150418 | None:intergenic | 35.0% | |
| GATGCAGTTAGTAACATTCT+TGG | - | chr3_1:79150507-79150526 | Msa0378390:intron | 35.0% | |
| CAACTACAGACATAGAAACT+TGG | + | chr3_1:79150637-79150656 | None:intergenic | 35.0% | |
| ! | TGCATTATAACGTGTTTTGC+AGG | - | chr3_1:79150744-79150763 | Msa0378390:intron | 35.0% |
| ! | ATTATAACGTGTTTTGCAGG+CGG | - | chr3_1:79150747-79150766 | Msa0378390:intron | 35.0% |
| ATCCCACAAATCTTAACACT+GGG | + | chr3_1:79150774-79150793 | None:intergenic | 35.0% | |
| TATCCCACAAATCTTAACAC+TGG | + | chr3_1:79150775-79150794 | None:intergenic | 35.0% | |
| !! | AATCTTTTCGGAAGTGCAAT+AGG | - | chr3_1:79150807-79150826 | Msa0378390:intron | 35.0% |
| !!! | TTTTTTTGCTATTGGCCAAG+TGG | - | chr3_1:79150973-79150992 | Msa0378390:intron | 35.0% |
| TGTTACAAGTTACAACCTAG+TGG | + | chr3_1:79151107-79151126 | None:intergenic | 35.0% | |
| TTTCTTAACATGTGCCCTTA+GGG | + | chr3_1:79151185-79151204 | None:intergenic | 35.0% | |
| !! | AATCATTAACTTGTGCCTTG+AGG | - | chr3_1:79151307-79151326 | Msa0378390:CDS | 35.0% |
| !! | ATCATTAACTTGTGCCTTGA+GGG | - | chr3_1:79151308-79151327 | Msa0378390:CDS | 35.0% |
| ! | TGTGTTTTGTGGGATTCAAA+TGG | - | chr3_1:79151361-79151380 | Msa0378390:intron | 35.0% |
| ! | CTGGCAGTTGCATTTTATTA+TGG | - | chr3_1:79151577-79151596 | Msa0378390:intron | 35.0% |
| TGATGACAGTTGAACTTGTA+TGG | - | chr3_1:79151706-79151725 | Msa0378390:CDS | 35.0% | |
| GATGACAGTTGAACTTGTAT+GGG | - | chr3_1:79151707-79151726 | Msa0378390:CDS | 35.0% | |
| AAAGACGCATGTCATATTTC+AGG | - | chr3_1:79151804-79151823 | Msa0378390:intron | 35.0% | |
| ! | AACCCATACATGATAGCTTT+TGG | - | chr3_1:79151828-79151847 | Msa0378390:intron | 35.0% |
| CACCACATGTTATGAAAATC+TGG | + | chr3_1:79151882-79151901 | None:intergenic | 35.0% | |
| ! | CAGATTTTCATAACATGTGG+TGG | - | chr3_1:79151880-79151899 | Msa0378390:intron | 35.0% |
| AGGTATATAACCTGCAACTT+TGG | + | chr3_1:79151970-79151989 | None:intergenic | 35.0% | |
| ! | TTCAAGACTTCAAAGGGTAT+CGG | + | chr3_1:79152048-79152067 | None:intergenic | 35.0% |
| CCTATAGTTCAAGACTTCAA+AGG | + | chr3_1:79152055-79152074 | None:intergenic | 35.0% | |
| !! | CCTTTGAAGTCTTGAACTAT+AGG | - | chr3_1:79152052-79152071 | Msa0378390:intron | 35.0% |
| ! | TTTTCTGCATGTGATCTGAT+AGG | + | chr3_1:79152132-79152151 | None:intergenic | 35.0% |
| ! | TTTTGTTCTCCTGGAAATTC+AGG | - | chr3_1:79152375-79152394 | Msa0378390:intron | 35.0% |
| AAAAACCTTTAGCATGTGAG+GGG | + | chr3_1:79152564-79152583 | None:intergenic | 35.0% | |
| !! | TTCATTGCTTTTCCTTCTGA+TGG | + | chr3_1:79152972-79152991 | None:intergenic | 35.0% |
| ! | ACAACATTTTATCTGCTCTG+TGG | - | chr3_1:79153023-79153042 | Msa0378390:intron | 35.0% |
| ! | GCTATCGTTATTCACCTTTT+TGG | - | chr3_1:79153146-79153165 | Msa0378390:intron | 35.0% |
| AGAAAGAGGCAGCAAAAAAA+TGG | - | chr3_1:79153210-79153229 | Msa0378390:intron | 35.0% | |
| !! | TCCATTTTTCAACGACGTTT+TGG | - | chr3_1:79153355-79153374 | Msa0378390:intron | 35.0% |
| !! | CCATTTTTCAACGACGTTTT+GGG | - | chr3_1:79153356-79153375 | Msa0378390:intron | 35.0% |
| ! | TGAATGGTTTGTATTTCTGC+AGG | + | chr3_1:79153562-79153581 | None:intergenic | 35.0% |
| ! | AGGAGGCAATAGATTTTATG+TGG | + | chr3_1:79153602-79153621 | None:intergenic | 35.0% |
| TAAAATCTATTGCCTCCTTC+TGG | - | chr3_1:79153604-79153623 | Msa0378390:five_prime_UTR | 35.0% | |
| ATGTAAGAAACTTATGTGGG+AGG | - | chr3_1:79153628-79153647 | Msa0378390:intron | 35.0% | |
| TTCTTCTTGAATGCAACTTC+GGG | + | chr3_1:79153706-79153725 | None:intergenic | 35.0% | |
| ATCTTCGTGGTCTATCTTAA+TGG | - | chr3_1:79153877-79153896 | Msa0378390:intron | 35.0% | |
| TCTTCGTGGTCTATCTTAAT+GGG | - | chr3_1:79153878-79153897 | Msa0378390:intron | 35.0% | |
| ! | GATTTTGAACTACGTGTAAG+TGG | + | chr3_1:79153934-79153953 | None:intergenic | 35.0% |
| GTACTTCTGCAGGAAATATT+TGG | - | chr3_1:79153957-79153976 | Msa0378390:five_prime_UTR | 35.0% | |
| GGGAATGAATAATTCCATCA+AGG | + | chr3_1:79153985-79154004 | None:intergenic | 35.0% | |
| TGCAGCAATTAGGTAGGAAT+TGG | + | chr3_1:79148542-79148561 | None:intergenic | 40.0% | |
| AACATAGCGTCTTCAATGTC+AGG | + | chr3_1:79149120-79149139 | None:intergenic | 40.0% | |
| !!! | GTCAGTTGGGTTTTGAAACA+GGG | - | chr3_1:79149191-79149210 | Msa0378390:intron | 40.0% |
| ! | GATTTGGCTCGAGTGAAATA+AGG | - | chr3_1:79149397-79149416 | Msa0378390:intron | 40.0% |
| TTATCCGGCAAAGAAAAAGG+GGG | - | chr3_1:79149583-79149602 | Msa0378390:intron | 40.0% | |
| ! | TTTACCCCCTTTTTCTTTGC+CGG | + | chr3_1:79149590-79149609 | None:intergenic | 40.0% |
| CACTCTCAAGTGAGGATAAA+TGG | + | chr3_1:79149613-79149632 | None:intergenic | 40.0% | |
| !! | TTGCCAAAATTTTGGCCACT+TGG | - | chr3_1:79149753-79149772 | Msa0378390:CDS | 40.0% |
| !! | TGCCAAAATTTTGGCCACTT+GGG | - | chr3_1:79149754-79149773 | Msa0378390:CDS | 40.0% |
| ! | ATCCCAAGTGGCCAAAATTT+TGG | + | chr3_1:79149759-79149778 | None:intergenic | 40.0% |
| GGTTATCGGGTAAAATGAGA+GGG | + | chr3_1:79149890-79149909 | None:intergenic | 40.0% | |
| CATGCACAAAAGAAAGAGGT+TGG | + | chr3_1:79149958-79149977 | None:intergenic | 40.0% | |
| GTTGCATTCACAGATCACAA+AGG | + | chr3_1:79149987-79150006 | None:intergenic | 40.0% | |
| TGGCAGGACAAATATAAGTG+AGG | + | chr3_1:79150051-79150070 | None:intergenic | 40.0% | |
| AAGATGGTAGAACACTCTTC+CGG | - | chr3_1:79150085-79150104 | Msa0378390:intron | 40.0% | |
| CAATGCCAACAATATCTCCA+CGG | + | chr3_1:79150126-79150145 | None:intergenic | 40.0% | |
| TGGAGATATTGTTGGCATTG+AGG | - | chr3_1:79150126-79150145 | Msa0378390:intron | 40.0% | |
| ! | GATATTGTTGGCATTGAGGA+TGG | - | chr3_1:79150130-79150149 | Msa0378390:intron | 40.0% |
| GCCATCATCGTCATAGTATT+TGG | + | chr3_1:79150173-79150192 | None:intergenic | 40.0% | |
| AAGGACACAGGAAATGTACA+AGG | + | chr3_1:79150235-79150254 | None:intergenic | 40.0% | |
| CATTTCCTGTGTCCTTGATT+CGG | - | chr3_1:79150239-79150258 | Msa0378390:CDS | 40.0% | |
| TTGTTGCCTTAATCTGAGTC+AGG | - | chr3_1:79150273-79150292 | Msa0378390:CDS | 40.0% | |
| ATAACAGCTGTGATAGGATC+TGG | - | chr3_1:79150324-79150343 | Msa0378390:CDS | 40.0% | |
| TAACAGCTGTGATAGGATCT+GGG | - | chr3_1:79150325-79150344 | Msa0378390:CDS | 40.0% | |
| CAGACATAGAAACTTGGGAT+AGG | + | chr3_1:79150631-79150650 | None:intergenic | 40.0% | |
| ! | TTATAACGTGTTTTGCAGGC+GGG | - | chr3_1:79150748-79150767 | Msa0378390:intron | 40.0% |
| CTTAACTCACATCATGCTCA+TGG | + | chr3_1:79150850-79150869 | None:intergenic | 40.0% | |
| CATGAGCATGATGTGAGTTA+AGG | - | chr3_1:79150848-79150867 | Msa0378390:intron | 40.0% | |
| GTGTTTAATTGGGCATGTGT+TGG | + | chr3_1:79150999-79151018 | None:intergenic | 40.0% | |
| !! | GTCATTTTATGTGGAGTCCA+CGG | + | chr3_1:79151072-79151091 | None:intergenic | 40.0% |
| CAAGTTACAACCTAGTGGTT+TGG | + | chr3_1:79151102-79151121 | None:intergenic | 40.0% | |
| ! | GGTTGTAACTTGTAACAACG+AGG | - | chr3_1:79151110-79151129 | Msa0378390:intron | 40.0% |
| !! | TAGTGTTAACTTGTGCCCTA+AGG | - | chr3_1:79151167-79151186 | Msa0378390:intron | 40.0% |
| !! | AGTGTTAACTTGTGCCCTAA+GGG | - | chr3_1:79151168-79151187 | Msa0378390:intron | 40.0% |
| GTTTCTTAACATGTGCCCTT+AGG | + | chr3_1:79151186-79151205 | None:intergenic | 40.0% | |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr3_1:79151325-79151344 | None:intergenic | 40.0% |
| CTGTAAATGGATGCTCACAT+TGG | + | chr3_1:79151493-79151512 | None:intergenic | 40.0% | |
| !!! | ATCAGCTGATTTTGGTTGAC+AGG | - | chr3_1:79151742-79151761 | Msa0378390:CDS | 40.0% |
| !!! | TCAGCTGATTTTGGTTGACA+GGG | - | chr3_1:79151743-79151762 | Msa0378390:CDS | 40.0% |
| TTATGTGTCCATACCTCTGA+TGG | - | chr3_1:79151780-79151799 | Msa0378390:CDS | 40.0% | |
| CGCCAAAAGCTATCATGTAT+GGG | + | chr3_1:79151833-79151852 | None:intergenic | 40.0% | |
| ACGCCAAAAGCTATCATGTA+TGG | + | chr3_1:79151834-79151853 | None:intergenic | 40.0% | |
| ! | ATACATGATAGCTTTTGGCG+TGG | - | chr3_1:79151833-79151852 | Msa0378390:intron | 40.0% |
| CTTGGAATTTCCAAAGTTGC+AGG | - | chr3_1:79151957-79151976 | Msa0378390:CDS | 40.0% | |
| !! | GAAAACCCCCCATACTTTTT+GGG | + | chr3_1:79152317-79152336 | None:intergenic | 40.0% |
| ! | AAAGGTGTACCTGAATTTCC+AGG | + | chr3_1:79152387-79152406 | None:intergenic | 40.0% |
| AAAACCTTTAGCATGTGAGG+GGG | + | chr3_1:79152563-79152582 | None:intergenic | 40.0% | |
| ATCAAATCTCCACCATCAGA+AGG | - | chr3_1:79152957-79152976 | Msa0378390:intron | 40.0% | |
| !! | ATTGCTTTTCCTTCTGATGG+TGG | + | chr3_1:79152969-79152988 | None:intergenic | 40.0% |
| ACACTTGGTATGCTCCAAAA+AGG | + | chr3_1:79153163-79153182 | None:intergenic | 40.0% | |
| TTTCTCGACGAAGGCAAATA+GGG | + | chr3_1:79153195-79153214 | None:intergenic | 40.0% | |
| AATCAACATTGCGATGAGAG+TGG | + | chr3_1:79153336-79153355 | None:intergenic | 40.0% | |
| CCCAAAACGTCGTTGAAAAA+TGG | + | chr3_1:79153359-79153378 | None:intergenic | 40.0% | |
| TGTACGATATACATCTCCAC+AGG | + | chr3_1:79153425-79153444 | None:intergenic | 40.0% | |
| TGAAGATCCCAAAATGGAGT+AGG | - | chr3_1:79153447-79153466 | Msa0378390:intron | 40.0% | |
| ! | TCCACTTCCTACTCCATTTT+GGG | + | chr3_1:79153457-79153476 | None:intergenic | 40.0% |
| ! | ATCCACTTCCTACTCCATTT+TGG | + | chr3_1:79153458-79153477 | None:intergenic | 40.0% |
| !! | GAGTAGGAAGTGGATTATTC+TGG | - | chr3_1:79153463-79153482 | Msa0378390:intron | 40.0% |
| CTGCCTCATTGTATCTATTG+TGG | - | chr3_1:79153502-79153521 | Msa0378390:intron | 40.0% | |
| CAGCCACAATAGATACAATG+AGG | + | chr3_1:79153508-79153527 | None:intergenic | 40.0% | |
| CTCATTGTATCTATTGTGGC+TGG | - | chr3_1:79153506-79153525 | Msa0378390:intron | 40.0% | |
| GTTTCTTACATTCCAGAAGG+AGG | + | chr3_1:79153619-79153638 | None:intergenic | 40.0% | |
| CTTCGTGGTCTATCTTAATG+GGG | - | chr3_1:79153879-79153898 | Msa0378390:five_prime_UTR | 40.0% | |
| TCTATCTTAATGGGGTCATG+TGG | - | chr3_1:79153887-79153906 | Msa0378390:five_prime_UTR | 40.0% | |
| TTTGAACTACGTGTAAGTGG+AGG | + | chr3_1:79153931-79153950 | None:intergenic | 40.0% | |
| CAAAATCTACGTACTTCTGC+AGG | - | chr3_1:79153947-79153966 | Msa0378390:five_prime_UTR | 40.0% | |
| ! | GGAAATATTTGGAGCCTTGA+TGG | - | chr3_1:79153968-79153987 | Msa0378390:five_prime_UTR | 40.0% |
| ! | GCACATTTTCGTTAACTGCC+AGG | - | chr3_1:79148559-79148578 | Msa0378390:CDS | 45.0% |
| AAAACAGAGTGTGTGGTACC+TGG | + | chr3_1:79148580-79148599 | None:intergenic | 45.0% | |
| AAACACGACACCAATTACCC+AGG | + | chr3_1:79148780-79148799 | None:intergenic | 45.0% | |
| ! | GAAGGTACAAATTGCGGCTT+TGG | - | chr3_1:79148996-79149015 | Msa0378390:CDS | 45.0% |
| TTGGATTGCCGCATGTCTAA+AGG | - | chr3_1:79149015-79149034 | Msa0378390:CDS | 45.0% | |
| !!! | GGTCAGTTGGGTTTTGAAAC+AGG | - | chr3_1:79149190-79149209 | Msa0378390:intron | 45.0% |
| CATGGAGGGATACATACAAC+AGG | - | chr3_1:79149526-79149545 | Msa0378390:intron | 45.0% | |
| ! | TTCTTGCAGAAAGTGTGTCC+TGG | - | chr3_1:79149551-79149570 | Msa0378390:intron | 45.0% |
| ! | TCTTGCAGAAAGTGTGTCCT+GGG | - | chr3_1:79149552-79149571 | Msa0378390:intron | 45.0% |
| TCCTGGGGTCAACATTTATC+CGG | - | chr3_1:79149568-79149587 | Msa0378390:intron | 45.0% | |
| AATCTGGGTCCACTCACATT+GGG | + | chr3_1:79149645-79149664 | None:intergenic | 45.0% | |
| AAATCTGGGTCCACTCACAT+TGG | + | chr3_1:79149646-79149665 | None:intergenic | 45.0% | |
| CGGTTATCGGGTAAAATGAG+AGG | + | chr3_1:79149891-79149910 | None:intergenic | 45.0% | |
| CAATATCTCCACGGTAGCTA+AGG | + | chr3_1:79150117-79150136 | None:intergenic | 45.0% | |
| AGCTACCGTGGAGATATTGT+TGG | - | chr3_1:79150118-79150137 | Msa0378390:intron | 45.0% | |
| ! | ACGATGATGGCCGTGTTAAA+CGG | - | chr3_1:79150182-79150201 | Msa0378390:CDS | 45.0% |
| TATCACCGAATCAAGGACAC+AGG | + | chr3_1:79150247-79150266 | None:intergenic | 45.0% | |
| ACGGTTCCTGACTCAGATTA+AGG | + | chr3_1:79150282-79150301 | None:intergenic | 45.0% | |
| AATCTGAGTCAGGAACCGTT+TGG | - | chr3_1:79150283-79150302 | Msa0378390:CDS | 45.0% | |
| AACAGCTGTGATAGGATCTG+GGG | - | chr3_1:79150326-79150345 | Msa0378390:CDS | 45.0% | |
| ! | CTCGCTGATTGTTATCGTTG+TGG | - | chr3_1:79150447-79150466 | Msa0378390:intron | 45.0% |
| GGCCCAGTGTTAAGATTTGT+GGG | - | chr3_1:79150769-79150788 | Msa0378390:intron | 45.0% | |
| !! | GGCTGTGAGGTCATTTTATG+TGG | + | chr3_1:79151081-79151100 | None:intergenic | 45.0% |
| TACCACACAACTGACAAACG+TGG | - | chr3_1:79151614-79151633 | Msa0378390:CDS | 45.0% | |
| ! | CGTCTTTTCCATCAGAGGTA+TGG | + | chr3_1:79151791-79151810 | None:intergenic | 45.0% |
| ! | ACATGCGTCTTTTCCATCAG+AGG | + | chr3_1:79151796-79151815 | None:intergenic | 45.0% |
| TCCACAATTGCTCTTGCTCT+TGG | - | chr3_1:79151939-79151958 | Msa0378390:CDS | 45.0% | |
| TCCAAGAGCAAGAGCAATTG+TGG | + | chr3_1:79151943-79151962 | None:intergenic | 45.0% | |
| ! | GGAAAACCCCCCATACTTTT+TGG | + | chr3_1:79152318-79152337 | None:intergenic | 45.0% |
| ! | AAAGTATGGGGGGTTTTCCA+AGG | - | chr3_1:79152319-79152338 | Msa0378390:intron | 45.0% |
| !!! | TGCATGGGATATGCTGCTTT+TGG | - | chr3_1:79153047-79153066 | Msa0378390:intron | 45.0% |
| TTCTCGACGAAGGCAAATAG+GGG | + | chr3_1:79153194-79153213 | None:intergenic | 45.0% | |
| CTTTCTCGACGAAGGCAAAT+AGG | + | chr3_1:79153196-79153215 | None:intergenic | 45.0% | |
| ATTTGCCTTCGTCGAGAAAG+AGG | - | chr3_1:79153196-79153215 | Msa0378390:intron | 45.0% | |
| !!! | AACGACGTTTTGGGAGTGAT+TGG | - | chr3_1:79153365-79153384 | Msa0378390:intron | 45.0% |
| !!! | ACGACGTTTTGGGAGTGATT+GGG | - | chr3_1:79153366-79153385 | Msa0378390:intron | 45.0% |
| !!! | TGATTGGGGCATTGGGATTT+TGG | - | chr3_1:79153381-79153400 | Msa0378390:intron | 45.0% |
| TCCCAAAATGGAGTAGGAAG+TGG | - | chr3_1:79153453-79153472 | Msa0378390:intron | 45.0% | |
| !! | GTATCTATTGTGGCTGGTCT+TGG | - | chr3_1:79153512-79153531 | Msa0378390:intron | 45.0% |
| GAAACTTATGTGGGAGGTGA+TGG | - | chr3_1:79153634-79153653 | Msa0378390:intron | 45.0% | |
| ATGGTTGTCACGGTCTTCTT+GGG | - | chr3_1:79153653-79153672 | Msa0378390:intron | 45.0% | |
| !! | AATAATAATAAAAAATTGAA+GGG | + | chr3_1:79148268-79148287 | None:intergenic | 5.0% |
| !! | TAATAATAATAAAAAATTGA+AGG | + | chr3_1:79148269-79148288 | None:intergenic | 5.0% |
| !! | AAATATAGAAAAAAAATTAT+TGG | + | chr3_1:79151286-79151305 | None:intergenic | 5.0% |
| ! | CTTGCAGAAAGTGTGTCCTG+GGG | - | chr3_1:79149553-79149572 | Msa0378390:intron | 50.0% |
| ! | ACGGTAGCTAAGGTTGGTTC+CGG | + | chr3_1:79150107-79150126 | None:intergenic | 50.0% |
| ATCTCCACGGTAGCTAAGGT+TGG | + | chr3_1:79150113-79150132 | None:intergenic | 50.0% | |
| ! | GTGGGAGCATGTAGTCCAAA+CGG | + | chr3_1:79150301-79150320 | None:intergenic | 50.0% |
| CTGAGCTATAGACCAGGCTA+AGG | + | chr3_1:79150358-79150377 | None:intergenic | 50.0% | |
| AGCCTGGTCTATAGCTCAGA+TGG | - | chr3_1:79150359-79150378 | Msa0378390:intron | 50.0% | |
| GCCTGGTCTATAGCTCAGAT+GGG | - | chr3_1:79150360-79150379 | Msa0378390:intron | 50.0% | |
| ACCCATCTGAGCTATAGACC+AGG | + | chr3_1:79150364-79150383 | None:intergenic | 50.0% | |
| GGTCTATAGCTCAGATGGGT+TGG | - | chr3_1:79150364-79150383 | Msa0378390:intron | 50.0% | |
| CGTTGTGGTGACACCGAATT+TGG | - | chr3_1:79150462-79150481 | Msa0378390:intron | 50.0% | |
| GGGCCCAGTGTTAAGATTTG+TGG | - | chr3_1:79150768-79150787 | Msa0378390:intron | 50.0% | |
| CAAACAAACACACGCACACG+AGG | - | chr3_1:79151018-79151037 | Msa0378390:intron | 50.0% | |
| ! | AACCTAGTGGTTTGGCTGTG+AGG | + | chr3_1:79151094-79151113 | None:intergenic | 50.0% |
| ACTGTTATGGGTAGCCTCAC+AGG | - | chr3_1:79152265-79152284 | Msa0378390:intron | 50.0% | |
| AGGCGATGTTTCCAAGACCT+TGG | + | chr3_1:79152339-79152358 | None:intergenic | 50.0% | |
| CATACCCCCTCACATGCTAA+AGG | - | chr3_1:79152556-79152575 | Msa0378390:intron | 50.0% | |
| TTATCTGCTCTGTGGCTGCA+TGG | - | chr3_1:79153031-79153050 | Msa0378390:intron | 50.0% | |
| TATCTGCTCTGTGGCTGCAT+GGG | - | chr3_1:79153032-79153051 | Msa0378390:intron | 50.0% | |
| !! | CTTTTGGAGACAATGCGCCA+GGG | - | chr3_1:79153063-79153082 | Msa0378390:intron | 50.0% |
| ATAGGGGTTGGGCATACACT+TGG | + | chr3_1:79153178-79153197 | None:intergenic | 50.0% | |
| GACGAAGGCAAATAGGGGTT+GGG | + | chr3_1:79153189-79153208 | None:intergenic | 50.0% | |
| GACTGTAGACTGGCAAACCA+GGG | + | chr3_1:79153268-79153287 | None:intergenic | 50.0% | |
| TGACTGTAGACTGGCAAACC+AGG | + | chr3_1:79153269-79153288 | None:intergenic | 50.0% | |
| !!! | CGACGTTTTGGGAGTGATTG+GGG | - | chr3_1:79153367-79153386 | Msa0378390:intron | 50.0% |
| TTTGGGAGTGATTGGGGCAT+TGG | - | chr3_1:79153373-79153392 | Msa0378390:intron | 50.0% | |
| ! | TTGGGAGTGATTGGGGCATT+GGG | - | chr3_1:79153374-79153393 | Msa0378390:intron | 50.0% |
| GATGGTTGTCACGGTCTTCT+TGG | - | chr3_1:79153652-79153671 | Msa0378390:intron | 50.0% | |
| CTGCCTAGTGGTGAGGTAGT+CGG | - | chr3_1:79148178-79148197 | Msa0378390:three_prime_UTR | 55.0% | |
| GCCGGATAAATGTTGACCCC+AGG | + | chr3_1:79149572-79149591 | None:intergenic | 55.0% | |
| GGAACCAACCTTAGCTACCG+TGG | - | chr3_1:79150106-79150125 | Msa0378390:intron | 55.0% | |
| GATGGCCGTGTTAAACGGAC+AGG | - | chr3_1:79150187-79150206 | Msa0378390:CDS | 55.0% | |
| !! | GCTCAGATGGGTTGGATTGC+TGG | - | chr3_1:79150372-79150391 | Msa0378390:intron | 55.0% |
| !! | ATGGGTTGGATTGCTGGTCC+TGG | - | chr3_1:79150378-79150397 | Msa0378390:intron | 55.0% |
| ! | TTGGGCATGTGTTGGCCACT+TGG | + | chr3_1:79150991-79151010 | None:intergenic | 55.0% |
| ACAAACACACGCACACGAGG+AGG | - | chr3_1:79151021-79151040 | Msa0378390:intron | 55.0% | |
| CAAACACACGCACACGAGGA+GGG | - | chr3_1:79151022-79151041 | Msa0378390:intron | 55.0% | |
| AAACACACGCACACGAGGAG+GGG | - | chr3_1:79151023-79151042 | Msa0378390:intron | 55.0% | |
| GACCTCACAGCCAAACCACT+AGG | - | chr3_1:79151089-79151108 | Msa0378390:intron | 55.0% | |
| CGCCACGTTTGTCAGTTGTG+TGG | + | chr3_1:79151619-79151638 | None:intergenic | 55.0% | |
| AGCCTCACAGGAGTAAGCGT+CGG | - | chr3_1:79152277-79152296 | Msa0378390:intron | 55.0% | |
| TTCCGACGCTTACTCCTGTG+AGG | + | chr3_1:79152282-79152301 | None:intergenic | 55.0% | |
| TGACCCCGGCCCAAAAAGTA+TGG | - | chr3_1:79152305-79152324 | Msa0378390:intron | 55.0% | |
| ! | GACCCCGGCCCAAAAAGTAT+GGG | - | chr3_1:79152306-79152325 | Msa0378390:intron | 55.0% |
| ! | ACCCCGGCCCAAAAAGTATG+GGG | - | chr3_1:79152307-79152326 | Msa0378390:intron | 55.0% |
| !! | ACCCCCCATACTTTTTGGGC+CGG | + | chr3_1:79152313-79152332 | None:intergenic | 55.0% |
| ! | TGGGGGGTTTTCCAAGGTCT+TGG | - | chr3_1:79152325-79152344 | Msa0378390:intron | 55.0% |
| !! | GCTTTTGGAGACAATGCGCC+AGG | - | chr3_1:79153062-79153081 | Msa0378390:intron | 55.0% |
| CGACGAAGGCAAATAGGGGT+TGG | + | chr3_1:79153190-79153209 | None:intergenic | 55.0% | |
| TGCTGCCTCTTTCTCGACGA+AGG | + | chr3_1:79153204-79153223 | None:intergenic | 55.0% | |
| !! | TGTGGCTGGTCTTGGCTCAT+TGG | - | chr3_1:79153520-79153539 | Msa0378390:intron | 55.0% |
| !! | GCTGGTCTTGGCTCATTGGT+CGG | - | chr3_1:79153524-79153543 | Msa0378390:intron | 55.0% |
| ! | TTGGCTCATTGGTCGGTGTC+TGG | - | chr3_1:79153531-79153550 | Msa0378390:intron | 55.0% |
| ! | GTGGGAGGTGATGGTTGTCA+CGG | - | chr3_1:79153643-79153662 | Msa0378390:intron | 55.0% |
| CTACGTGTAAGTGGAGGCCT+GGG | + | chr3_1:79153925-79153944 | None:intergenic | 55.0% | |
| ACTACGTGTAAGTGGAGGCC+TGG | + | chr3_1:79153926-79153945 | None:intergenic | 55.0% | |
| AGCGTGAATTGCAGCGGCAG+TGG | - | chr3_1:79148110-79148129 | Msa0378390:three_prime_UTR | 60.0% | |
| GTGGAGTCGGCGGTCCAATT+AGG | + | chr3_1:79148151-79148170 | None:intergenic | 60.0% | |
| !! | ATTGGACCGCCGACTCCACA+AGG | - | chr3_1:79148152-79148171 | Msa0378390:three_prime_UTR | 60.0% |
| ! | TCGCCGACTACCTCACCACT+AGG | + | chr3_1:79148184-79148203 | None:intergenic | 60.0% |
| AACACACGCACACGAGGAGG+GGG | - | chr3_1:79151024-79151043 | Msa0378390:intron | 60.0% | |
| GGAGTCCACGGTTTGAACCC+AGG | + | chr3_1:79151060-79151079 | None:intergenic | 60.0% | |
| !! | AAGCGTCGGAACAGTGACCC+CGG | - | chr3_1:79152291-79152310 | Msa0378390:intron | 60.0% |
| !! | CCCCCATACTTTTTGGGCCG+GGG | + | chr3_1:79152311-79152330 | None:intergenic | 60.0% |
| ! | CCCCGGCCCAAAAAGTATGG+GGG | - | chr3_1:79152308-79152327 | Msa0378390:intron | 60.0% |
| !! | CCCCCCATACTTTTTGGGCC+GGG | + | chr3_1:79152312-79152331 | None:intergenic | 60.0% |
| ! | CCCGGCCCAAAAAGTATGGG+GGG | - | chr3_1:79152309-79152328 | Msa0378390:intron | 60.0% |
| TGTGGCCATGTCTGCATCCC+AGG | - | chr3_1:79153905-79153924 | Msa0378390:five_prime_UTR | 60.0% | |
| AGGCAGCCGCCTTGTGGAGT+CGG | + | chr3_1:79148164-79148183 | None:intergenic | 65.0% | |
| TCCACAAGGCGGCTGCCTAG+TGG | - | chr3_1:79148166-79148185 | Msa0378390:three_prime_UTR | 65.0% | |
| ACCACTAGGCAGCCGCCTTG+TGG | + | chr3_1:79148170-79148189 | None:intergenic | 65.0% | |
| AAGGCGGCTGCCTAGTGGTG+AGG | - | chr3_1:79148171-79148190 | Msa0378390:three_prime_UTR | 65.0% | |
| ! | CTGGGGTGCTCTCCTTAGCC+TGG | - | chr3_1:79150343-79150362 | Msa0378390:intron | 65.0% |
| GCACACGAGGAGGGGGAATG+TGG | - | chr3_1:79151031-79151050 | Msa0378390:intron | 65.0% | |
| CACGAGGAGGGGGAATGTGG+TGG | - | chr3_1:79151034-79151053 | Msa0378390:intron | 65.0% | |
| GAGGGGGAATGTGGTGGCCT+GGG | - | chr3_1:79151040-79151059 | Msa0378390:intron | 65.0% | |
| GGTGGCCTGGGTTCAAACCG+TGG | - | chr3_1:79151052-79151071 | Msa0378390:intron | 65.0% | |
| AATCCGGCGAGCAGGTTCCC+TGG | + | chr3_1:79153083-79153102 | None:intergenic | 65.0% | |
| GGGAACCTGCTCGCCGGATT+TGG | - | chr3_1:79153083-79153102 | Msa0378390:intron | 65.0% | |
| GGAGGCCTGGGATGCAGACA+TGG | + | chr3_1:79153913-79153932 | None:intergenic | 65.0% | |
| !! | GGACCGCCGACTCCACAAGG+CGG | - | chr3_1:79148155-79148174 | Msa0378390:three_prime_UTR | 70.0% |
| CAGCCGCCTTGTGGAGTCGG+CGG | + | chr3_1:79148161-79148180 | None:intergenic | 70.0% | |
| GGAGGGGGAATGTGGTGGCC+TGG | - | chr3_1:79151039-79151058 | Msa0378390:intron | 70.0% | |
| GCGCCAGGGAACCTGCTCGC+CGG | - | chr3_1:79153077-79153096 | Msa0378390:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 79148108 | 79154006 | 79148108 | ID=Msa0378390;Name=Msa0378390 |
| chr3_1 | mRNA | 79148108 | 79154006 | 79148108 | ID=Msa0378390-mRNA-1;Parent=Msa0378390;Name=Msa0378390-mRNA-1;_AED=0.28;_eAED=0.28;_QI=237|1|1|1|0.71|0.62|8|411|482 |
| chr3_1 | exon | 79148108 | 79149163 | 79148108 | ID=Msa0378390-mRNA-1:exon:19334;Parent=Msa0378390-mRNA-1 |
| chr3_1 | exon | 79149718 | 79149857 | 79149718 | ID=Msa0378390-mRNA-1:exon:19333;Parent=Msa0378390-mRNA-1 |
| chr3_1 | exon | 79150136 | 79150350 | 79150136 | ID=Msa0378390-mRNA-1:exon:19332;Parent=Msa0378390-mRNA-1 |
| chr3_1 | exon | 79151255 | 79151348 | 79151255 | ID=Msa0378390-mRNA-1:exon:19331;Parent=Msa0378390-mRNA-1 |
| chr3_1 | exon | 79151586 | 79151819 | 79151586 | ID=Msa0378390-mRNA-1:exon:19330;Parent=Msa0378390-mRNA-1 |
| chr3_1 | exon | 79151906 | 79152040 | 79151906 | ID=Msa0378390-mRNA-1:exon:19329;Parent=Msa0378390-mRNA-1 |
| chr3_1 | exon | 79153534 | 79153628 | 79153534 | ID=Msa0378390-mRNA-1:exon:19328;Parent=Msa0378390-mRNA-1 |
| chr3_1 | exon | 79153879 | 79154006 | 79153879 | ID=Msa0378390-mRNA-1:exon:19327;Parent=Msa0378390-mRNA-1 |
| chr3_1 | five_prime_UTR | 79153879 | 79154006 | 79153879 | ID=Msa0378390-mRNA-1:five_prime_utr;Parent=Msa0378390-mRNA-1 |
| chr3_1 | five_prime_UTR | 79153534 | 79153628 | 79153534 | ID=Msa0378390-mRNA-1:five_prime_utr;Parent=Msa0378390-mRNA-1 |
| chr3_1 | five_prime_UTR | 79152027 | 79152040 | 79152027 | ID=Msa0378390-mRNA-1:five_prime_utr;Parent=Msa0378390-mRNA-1 |
| chr3_1 | CDS | 79151906 | 79152026 | 79151906 | ID=Msa0378390-mRNA-1:cds;Parent=Msa0378390-mRNA-1 |
| chr3_1 | CDS | 79151586 | 79151819 | 79151586 | ID=Msa0378390-mRNA-1:cds;Parent=Msa0378390-mRNA-1 |
| chr3_1 | CDS | 79151255 | 79151348 | 79151255 | ID=Msa0378390-mRNA-1:cds;Parent=Msa0378390-mRNA-1 |
| chr3_1 | CDS | 79150136 | 79150350 | 79150136 | ID=Msa0378390-mRNA-1:cds;Parent=Msa0378390-mRNA-1 |
| chr3_1 | CDS | 79149718 | 79149857 | 79149718 | ID=Msa0378390-mRNA-1:cds;Parent=Msa0378390-mRNA-1 |
| chr3_1 | CDS | 79148519 | 79149163 | 79148519 | ID=Msa0378390-mRNA-1:cds;Parent=Msa0378390-mRNA-1 |
| chr3_1 | three_prime_UTR | 79148108 | 79148518 | 79148108 | ID=Msa0378390-mRNA-1:three_prime_utr;Parent=Msa0378390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
