Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720660 | XP_013453689.1 | 97.876 | 659 | 11 | 2 | 1 | 657 | 1 | 658 | 0.0 | 1342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720660 | sp|Q9T074|PCKA1_ARATH | 83.208 | 667 | 98 | 6 | 2 | 657 | 8 | 671 | 0.0 | 1146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720660 | G7KF50 | 97.876 | 659 | 11 | 2 | 1 | 657 | 1 | 658 | 0.0 | 1342 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043120 | Msa0720660 | 0.825616 | 4.254689e-54 | -8.615850e-47 |
| Msa0059880 | Msa0720660 | 0.809831 | 1.557564e-50 | -8.615850e-47 |
| Msa0072380 | Msa0720660 | 0.806735 | 7.120004e-50 | -8.615850e-47 |
| Msa0720660 | Msa0738660 | 0.801816 | 7.530920e-49 | -8.615850e-47 |
| Msa0720660 | Msa0761250 | 0.929363 | 7.734518e-93 | -8.615850e-47 |
| Msa0720660 | Msa0803560 | 0.865699 | 4.885730e-65 | -8.615850e-47 |
| Msa0720660 | Msa0841800 | 0.931006 | 7.140267e-94 | -8.615850e-47 |
| Msa0720660 | Msa0883610 | 0.809215 | 2.112461e-50 | -8.615850e-47 |
| Msa0720660 | Msa0910570 | 0.810226 | 1.280558e-50 | -8.615850e-47 |
| Msa0720660 | Msa0948460 | 0.816835 | 4.506256e-52 | -8.615850e-47 |
| Msa0720660 | Msa0985250 | 0.813512 | 2.465198e-51 | -8.615850e-47 |
| Msa0720660 | Msa0985290 | 0.814548 | 1.456648e-51 | -8.615850e-47 |
| Msa0720660 | Msa1100560 | 0.800611 | 1.328605e-48 | -8.615850e-47 |
| Msa0150910 | Msa0720660 | 0.805150 | 1.533708e-49 | -8.615850e-47 |
| Msa0378390 | Msa0720660 | 0.810186 | 1.306375e-50 | -8.615850e-47 |
| Msa0407330 | Msa0720660 | 0.829565 | 4.793749e-55 | -8.615850e-47 |
| Msa0427740 | Msa0720660 | 0.809154 | 2.176490e-50 | -8.615850e-47 |
| Msa0427970 | Msa0720660 | 0.818195 | 2.225049e-52 | -8.615850e-47 |
| Msa0318370 | Msa0720660 | 0.808452 | 3.076433e-50 | -8.615850e-47 |
| Msa0518570 | Msa0720660 | 0.808068 | 3.714489e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720660 | MtrunA17_Chr5g0411471 | 97.876 | 659 | 11 | 2 | 1 | 657 | 1 | 658 | 0.0 | 1342 |
| Msa0720660 | MtrunA17_Chr8g0366821 | 85.023 | 641 | 85 | 6 | 22 | 657 | 13 | 647 | 0.0 | 1100 |
| Msa0720660 | MtrunA17_Chr3g0141011 | 81.431 | 657 | 108 | 5 | 14 | 657 | 26 | 681 | 0.0 | 1100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720660 | AT4G37870.1 | 83.208 | 667 | 98 | 6 | 2 | 657 | 8 | 671 | 0.0 | 1146 |
| Msa0720660 | AT5G65690.1 | 78.120 | 681 | 114 | 7 | 1 | 657 | 1 | 670 | 0.0 | 1099 |
| Msa0720660 | AT5G65690.4 | 78.120 | 681 | 114 | 7 | 1 | 657 | 1 | 670 | 0.0 | 1099 |
| Msa0720660 | AT5G65690.2 | 74.719 | 712 | 114 | 8 | 1 | 657 | 1 | 701 | 0.0 | 1082 |
| Msa0720660 | AT5G65690.3 | 78.646 | 576 | 89 | 6 | 1 | 552 | 1 | 566 | 0.0 | 942 |
Find 194 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTGAAGTTGCAGTTTC+TGG | 0.137217 | 5_1:+16738027 | None:intergenic |
| CTTACACTCTGGTTCTAATA+TGG | 0.179996 | 5_1:-16733766 | Msa0720660:CDS |
| GGAGCAATGGCAACACTTTC+TGG | 0.186986 | 5_1:-16736010 | Msa0720660:CDS |
| GGCGATGTTGCTCTCTTCTT+TGG | 0.196899 | 5_1:-16733735 | Msa0720660:CDS |
| CCTGAAGAGCTGGAGAATTT+TGG | 0.219791 | 5_1:-16733987 | Msa0720660:CDS |
| GTTAGGGTGGTAGAATAAAT+TGG | 0.224190 | 5_1:-16731642 | Msa0720660:three_prime_UTR |
| ACCTTCACCAACTACAAAAT+TGG | 0.225091 | 5_1:-16731757 | Msa0720660:CDS |
| GCCAAAAGAATAACATTCTT+TGG | 0.240576 | 5_1:+16732537 | None:intergenic |
| CCAAAATTCTCCAGCTCTTC+AGG | 0.242891 | 5_1:+16733987 | None:intergenic |
| TCCAAAGAATGTTATTCTTT+TGG | 0.252662 | 5_1:-16732538 | Msa0720660:CDS |
| CATCATTATTGCACTTCTTA+TGG | 0.257353 | 5_1:-16738816 | Msa0720660:five_prime_UTR |
| AATTGGGCCTTATAATATAT+TGG | 0.262653 | 5_1:-16731625 | Msa0720660:three_prime_UTR |
| CTGATATCTGGAATGCAATT+AGG | 0.263491 | 5_1:-16733390 | Msa0720660:CDS |
| TGTGTGGGACTAGGATTGTT+AGG | 0.280398 | 5_1:-16731659 | Msa0720660:three_prime_UTR |
| ACGGTTACATGGAAACTTTC+CGG | 0.288544 | 5_1:+16733938 | None:intergenic |
| TGAACGACCAATTCTTGAAT+TGG | 0.290588 | 5_1:-16734336 | Msa0720660:CDS |
| CTGACTTTGATTCTGTTCTC+TGG | 0.294165 | 5_1:+16734310 | None:intergenic |
| CAACCAACCAATATATTATA+AGG | 0.298077 | 5_1:+16731618 | None:intergenic |
| ACATCCTAGCTACAATTCTT+TGG | 0.301682 | 5_1:-16738730 | Msa0720660:intron |
| GGATCTCCCTTCACCACCTT+TGG | 0.308079 | 5_1:+16736673 | None:intergenic |
| GGAGTTGAAGTTCCTGTATT+AGG | 0.311899 | 5_1:+16738077 | None:intergenic |
| AGTTGATTACTTGAATTCTT+TGG | 0.317106 | 5_1:-16735559 | Msa0720660:CDS |
| GTAAATTATGATCAACCTTC+TGG | 0.327850 | 5_1:+16736641 | None:intergenic |
| TTGATCTTAATCTTGCTAGA+AGG | 0.332635 | 5_1:-16733884 | Msa0720660:CDS |
| ATTGCTTCACTTCAAAAGAT+TGG | 0.338636 | 5_1:+16731691 | None:intergenic |
| CTTATAATATATTGGTTGGT+TGG | 0.343784 | 5_1:-16731617 | Msa0720660:three_prime_UTR |
| TATTCTGATAAATCAGTTAC+AGG | 0.344858 | 5_1:-16733192 | Msa0720660:intron |
| CTGGATCCCAATTCAAGAAT+TGG | 0.347042 | 5_1:+16734329 | None:intergenic |
| CTAATTGCATTCCAGATATC+AGG | 0.350357 | 5_1:+16733391 | None:intergenic |
| ACACATGGTAACTTTGCATT+TGG | 0.355254 | 5_1:+16732570 | None:intergenic |
| AGGATGTTGCTGAGAAAATC+TGG | 0.363492 | 5_1:+16738746 | None:intergenic |
| ACTTAGTTTGATACGATTCC+CGG | 0.369523 | 5_1:+16732071 | None:intergenic |
| GCTCTCTTCTTTGGACTCTC+AGG | 0.378934 | 5_1:-16733726 | Msa0720660:intron |
| TTATAATATATTGGTTGGTT+GGG | 0.384637 | 5_1:-16731616 | Msa0720660:three_prime_UTR |
| GGGAGAAAGAGCCTGATATC+TGG | 0.386458 | 5_1:-16733402 | Msa0720660:CDS |
| TAGAGACAAGCGTGTGGTTA+AGG | 0.386634 | 5_1:-16735966 | Msa0720660:CDS |
| GGATAACTAACCGCATTGAT+AGG | 0.392059 | 5_1:+16731922 | None:intergenic |
| ATCTGGAATGCAATTAGGTT+TGG | 0.396803 | 5_1:-16733385 | Msa0720660:CDS |
| ATGGAGAGCCATGGTGCAAC+AGG | 0.406887 | 5_1:-16732228 | Msa0720660:CDS |
| TAATCTTGCTAGAAGGGAAA+TGG | 0.408462 | 5_1:-16733877 | Msa0720660:CDS |
| CAACAGAGAACGGGAGCAAC+GGG | 0.409664 | 5_1:-16738226 | Msa0720660:CDS |
| ATATATTGGTTGGTTGGGTC+AGG | 0.410932 | 5_1:-16731611 | Msa0720660:three_prime_UTR |
| GATCATAATAGATATTTGAT+TGG | 0.411882 | 5_1:-16733505 | Msa0720660:CDS |
| AGATATCAGGCTCTTTCTCC+CGG | 0.413843 | 5_1:+16733404 | None:intergenic |
| TTCTCCAGCTCTTCAGGACT+GGG | 0.416723 | 5_1:+16733993 | None:intergenic |
| TGGTACTGAGGATGGTATAA+AGG | 0.419919 | 5_1:-16732337 | Msa0720660:CDS |
| CAGTATATCCACTGATGAAA+TGG | 0.420627 | 5_1:+16732454 | None:intergenic |
| TCAACCTTCTGGCTCTTGGC+TGG | 0.425374 | 5_1:+16736652 | None:intergenic |
| ATGATCAACCTTCTGGCTCT+TGG | 0.426037 | 5_1:+16736648 | None:intergenic |
| AACTGCAACTTCAATCAATT+AGG | 0.428100 | 5_1:-16738022 | Msa0720660:intron |
| TCCTCATCCATCTCAATGTT+AGG | 0.429129 | 5_1:+16735609 | None:intergenic |
| ATGTAATGTGAAAGACAAAT+AGG | 0.432576 | 5_1:+16738836 | None:intergenic |
| GTGTGGGACTAGGATTGTTA+GGG | 0.435038 | 5_1:-16731658 | Msa0720660:three_prime_UTR |
| GTTCCTGTATTAGGTGTAGA+AGG | 0.436750 | 5_1:+16738086 | None:intergenic |
| AAGTGTTGCCATTGCTCCAT+TGG | 0.439666 | 5_1:+16736015 | None:intergenic |
| ATTCTCCAGCTCTTCAGGAC+TGG | 0.443936 | 5_1:+16733992 | None:intergenic |
| TTGGAGATGATGAACATTGT+TGG | 0.450977 | 5_1:-16733486 | Msa0720660:CDS |
| GAACGACCAATTCTTGAATT+GGG | 0.451977 | 5_1:-16734335 | Msa0720660:CDS |
| CAAGCGTGTGGTTAAGGATA+AGG | 0.452105 | 5_1:-16735960 | Msa0720660:CDS |
| TTAGGGTGGTAGAATAAATT+GGG | 0.453977 | 5_1:-16731641 | Msa0720660:three_prime_UTR |
| AGCATTGCAGCATACTTTGT+AGG | 0.462291 | 5_1:+16732261 | None:intergenic |
| CTCTACAATCTCTCCCCAGC+TGG | 0.470396 | 5_1:-16736553 | Msa0720660:intron |
| CATATTAGAACCAGAGTGTA+AGG | 0.471495 | 5_1:+16733767 | None:intergenic |
| TACTGAAAATGAACTTTGGT+GGG | 0.472517 | 5_1:-16735936 | Msa0720660:CDS |
| TCCTCGGCACACAGTACGCC+GGG | 0.476619 | 5_1:-16733851 | Msa0720660:CDS |
| GATGGATGAGGAGACTTTCA+TGG | 0.477834 | 5_1:-16735598 | Msa0720660:CDS |
| TTACACTCTGGTTCTAATAT+GGG | 0.481177 | 5_1:-16733765 | Msa0720660:CDS |
| TATGTAGGTGGCTGGTACTG+AGG | 0.482389 | 5_1:-16732349 | Msa0720660:intron |
| GGACACCCTCTACTTCAGTT+GGG | 0.483575 | 5_1:+16731962 | None:intergenic |
| AATGGTACATGGTCTGCGCC+AGG | 0.489790 | 5_1:+16732472 | None:intergenic |
| CTAAATGCATCGATCTCTCC+CGG | 0.489864 | 5_1:-16733423 | Msa0720660:CDS |
| ACACTGGTTGGTCCGGTGGC+AGG | 0.490211 | 5_1:-16732194 | Msa0720660:intron |
| GAAGTGCTGCAACAGAGAAC+GGG | 0.493568 | 5_1:-16738235 | Msa0720660:CDS |
| GGGCCTTATAATATATTGGT+TGG | 0.497479 | 5_1:-16731621 | Msa0720660:three_prime_UTR |
| CTACTTCAGTTGGGGTCTGA+AGG | 0.499246 | 5_1:+16731971 | None:intergenic |
| AAGACCTTTCTTCATTTCCC+CGG | 0.500559 | 5_1:+16733833 | None:intergenic |
| AAGGAGAGAATTTGACGCTT+AGG | 0.500625 | 5_1:+16733786 | None:intergenic |
| ACGACACAGAAAAGTGTGAA+TGG | 0.501173 | 5_1:-16738191 | Msa0720660:CDS |
| TGATCTTAATCTTGCTAGAA+GGG | 0.503025 | 5_1:-16733883 | Msa0720660:CDS |
| CTTGTTAACACTGGTTGGTC+CGG | 0.504922 | 5_1:-16732201 | Msa0720660:CDS |
| AATCAATGCAGCTATGGTAC+CGG | 0.505303 | 5_1:-16732090 | Msa0720660:intron |
| ACACTTTCTGGTGCCAAGAC+AGG | 0.508621 | 5_1:-16735998 | Msa0720660:CDS |
| TCTTCTTGTATTCTGCCTCC+AGG | 0.510342 | 5_1:+16732007 | None:intergenic |
| AGAATAACATTCTTTGGATG+AGG | 0.511311 | 5_1:+16732543 | None:intergenic |
| GCATTTGGTATGTACTCTAT+CGG | 0.512324 | 5_1:+16732585 | None:intergenic |
| CAATGCGACATTGTTGAAGC+TGG | 0.513933 | 5_1:-16731806 | Msa0720660:CDS |
| TGATCAGAGAGAGTAGCAAA+TGG | 0.515175 | 5_1:+16738056 | None:intergenic |
| CATCAGTGGATATACTGCTC+TGG | 0.515676 | 5_1:-16732448 | Msa0720660:intron |
| CCGACCCAGTCCTGAAGAGC+TGG | 0.516317 | 5_1:-16733997 | Msa0720660:CDS |
| CGACACAGAAAAGTGTGAAT+GGG | 0.516432 | 5_1:-16738190 | Msa0720660:CDS |
| GCATTGCAGCATACTTTGTA+GGG | 0.518322 | 5_1:+16732262 | None:intergenic |
| ACAGAAGAGATTCTTGCAGC+TGG | 0.519195 | 5_1:-16731715 | Msa0720660:CDS |
| CTTTCATGGTGAATAGAGAA+AGG | 0.519639 | 5_1:-16735584 | Msa0720660:CDS |
| GTTATGTTGTGTGTGGGACT+AGG | 0.521181 | 5_1:-16731668 | Msa0720660:three_prime_UTR |
| TCTAGGAGAACGACCTGTCT+TGG | 0.522767 | 5_1:+16735985 | None:intergenic |
| TGCAATGCTTGCTGAAAAGA+TGG | 0.522791 | 5_1:-16732247 | Msa0720660:CDS |
| GCATCATTGACAAGAGAAAG+TGG | 0.524765 | 5_1:-16736697 | Msa0720660:CDS |
| TTACTGAAAATGAACTTTGG+TGG | 0.525635 | 5_1:-16735937 | Msa0720660:CDS |
| ACCAACTACAAAATTGGAAA+GGG | 0.529142 | 5_1:-16731751 | Msa0720660:CDS |
| TGGTGTAGAACTATATGAGC+AGG | 0.531503 | 5_1:-16736071 | Msa0720660:intron |
| AAGTGGACCAAAGGTGGTGA+AGG | 0.532921 | 5_1:-16736680 | Msa0720660:CDS |
| TAGTGAGTGAAACGGTTACA+TGG | 0.534817 | 5_1:+16733927 | None:intergenic |
| TTAACCACACGCTTGTCTCT+AGG | 0.537668 | 5_1:+16735968 | None:intergenic |
| TGGGACTAGGATTGTTAGGG+TGG | 0.537957 | 5_1:-16731655 | Msa0720660:three_prime_UTR |
| GCAACAGAGAACGGGAGCAA+CGG | 0.538555 | 5_1:-16738227 | Msa0720660:CDS |
| GCACCTTCTACACCTAATAC+AGG | 0.542170 | 5_1:-16738089 | Msa0720660:CDS |
| ATCAATGCAGCTATGGTACC+GGG | 0.545238 | 5_1:-16732089 | Msa0720660:intron |
| TGTGAAAGACAAATAGGTGA+TGG | 0.545611 | 5_1:+16738842 | None:intergenic |
| GCATTGTATATAGTGAAGTC+CGG | 0.545860 | 5_1:+16733960 | None:intergenic |
| TATTCACAATGGAAGCCTCC+TGG | 0.545910 | 5_1:-16732025 | Msa0720660:CDS |
| AATGCAATTAGGTTTGGTAC+AGG | 0.548007 | 5_1:-16733379 | Msa0720660:intron |
| GGGACACCCTCTACTTCAGT+TGG | 0.548012 | 5_1:+16731961 | None:intergenic |
| GGATCATTCATCACTTCCAA+TGG | 0.548370 | 5_1:-16736031 | Msa0720660:CDS |
| GAACATTGTTGGAGTGAGAA+TGG | 0.551621 | 5_1:-16733475 | Msa0720660:CDS |
| ATTATTGATGCTATTCACAA+TGG | 0.551643 | 5_1:-16732036 | Msa0720660:CDS |
| GGAAGTGCTGCAACAGAGAA+CGG | 0.551941 | 5_1:-16738236 | Msa0720660:CDS |
| CGAACCAAAGAATTGTAGCT+AGG | 0.555604 | 5_1:+16738726 | None:intergenic |
| GACTTCACTATATACAATGC+CGG | 0.556176 | 5_1:-16733957 | Msa0720660:CDS |
| TTAAGGGAGTTGTACCAGCT+GGG | 0.561260 | 5_1:+16736539 | None:intergenic |
| AAAATGGCATCAAACGGAAA+CGG | 0.562203 | 5_1:-16738257 | Msa0720660:CDS |
| CACCAACTACAAAATTGGAA+AGG | 0.562306 | 5_1:-16731752 | Msa0720660:CDS |
| TTTCATGGTGAATAGAGAAA+GGG | 0.563156 | 5_1:-16735583 | Msa0720660:CDS |
| AGGTTACTGAAAATGAACTT+TGG | 0.564008 | 5_1:-16735940 | Msa0720660:CDS |
| CAAATTCTCTCCTTACACTC+TGG | 0.566178 | 5_1:-16733777 | Msa0720660:CDS |
| CAGGCGATAAAATATGAGAA+AGG | 0.567458 | 5_1:-16736052 | Msa0720660:CDS |
| GGGATTTGTCACGATGATAG+TGG | 0.568344 | 5_1:-16738170 | Msa0720660:CDS |
| GTTAACACTGGTTGGTCCGG+TGG | 0.568391 | 5_1:-16732198 | Msa0720660:CDS |
| GATATCAGGCTCTTTCTCCC+GGG | 0.569948 | 5_1:+16733405 | None:intergenic |
| GGGTTCTCCTAACATTGAGA+TGG | 0.576526 | 5_1:-16735616 | Msa0720660:CDS |
| TGTTGTGCATGAACAATGAA+TGG | 0.579766 | 5_1:+16734266 | None:intergenic |
| ATAGGATCAAGAATTTCTGA+AGG | 0.581378 | 5_1:+16731940 | None:intergenic |
| TCAGACCCCAACTGAAGTAG+AGG | 0.582028 | 5_1:-16731968 | Msa0720660:CDS |
| TCCTAACATTGAGATGGATG+AGG | 0.583346 | 5_1:-16735610 | Msa0720660:CDS |
| ATGTCATGTAGTGAGTGAAA+CGG | 0.587227 | 5_1:+16733919 | None:intergenic |
| TTTATTTGTATACTACAATG+AGG | 0.588133 | 5_1:+16731486 | None:intergenic |
| CATCACTTCCAATGGAGCAA+TGG | 0.588910 | 5_1:-16736023 | Msa0720660:CDS |
| ACTGAAAATGAACTTTGGTG+GGG | 0.589502 | 5_1:-16735935 | Msa0720660:CDS |
| GAACAATGAATGGTATGCTC+TGG | 0.589973 | 5_1:+16734276 | None:intergenic |
| GACAAGAGAAAGTGGACCAA+AGG | 0.590224 | 5_1:-16736689 | Msa0720660:CDS |
| CTAACAGCAATGGTTGGAGC+AGG | 0.593955 | 5_1:+16736604 | None:intergenic |
| TTACTTGAATTCTTTGGACA+AGG | 0.593969 | 5_1:-16735553 | Msa0720660:intron |
| AATGCAAAGTTACCATGTGT+TGG | 0.595409 | 5_1:-16732567 | Msa0720660:CDS |
| TGGTATGTACTCTATCGGAT+AGG | 0.597196 | 5_1:+16732590 | None:intergenic |
| AGAAGGGAAATGGTTATCCT+CGG | 0.598433 | 5_1:-16733867 | Msa0720660:CDS |
| GATGGCTTGTTAACACTGGT+TGG | 0.601864 | 5_1:-16732206 | Msa0720660:CDS |
| ATAACAACCACCTTCAATGT+TGG | 0.603993 | 5_1:+16733447 | None:intergenic |
| ATGGTACATGGTCTGCGCCA+GGG | 0.609620 | 5_1:+16732473 | None:intergenic |
| TACGCCGGGGAAATGAAGAA+AGG | 0.609823 | 5_1:-16733837 | Msa0720660:CDS |
| TCCACTGATGAAATGGTACA+TGG | 0.610146 | 5_1:+16732461 | None:intergenic |
| CCCCGGCGTACTGTGTGCCG+AGG | 0.610936 | 5_1:+16733850 | None:intergenic |
| CCAGCTCTTCAGGACTGGGT+CGG | 0.611651 | 5_1:+16733997 | None:intergenic |
| GACACCCTCTACTTCAGTTG+GGG | 0.614848 | 5_1:+16731963 | None:intergenic |
| ATTATGATCAGTAGAAAGAG+TGG | 0.616425 | 5_1:+16733519 | None:intergenic |
| AGTGGACCAAAGGTGGTGAA+GGG | 0.616458 | 5_1:-16736679 | Msa0720660:CDS |
| AAGATTAAGATCAATGCTAG+TGG | 0.617025 | 5_1:+16733893 | None:intergenic |
| TTTGGATGAGGTCCAACACA+TGG | 0.620676 | 5_1:+16732555 | None:intergenic |
| AGAGCCATGGTGCAACAGGA+TGG | 0.624139 | 5_1:-16732224 | Msa0720660:CDS |
| CTGTCACTAACAGCAATGGT+TGG | 0.625090 | 5_1:+16736598 | None:intergenic |
| TAAATGCATCGATCTCTCCC+GGG | 0.625176 | 5_1:-16733422 | Msa0720660:CDS |
| ATCCTCGGCACACAGTACGC+CGG | 0.626445 | 5_1:-16733852 | Msa0720660:CDS |
| ACCATGTACCATTTCATCAG+TGG | 0.627912 | 5_1:-16732462 | Msa0720660:CDS |
| GGTTCTAATATGGGCAAAGG+TGG | 0.628625 | 5_1:-16733756 | Msa0720660:CDS |
| GCCAGGGTTAGCTTACTCAC+AGG | 0.631139 | 5_1:+16732489 | None:intergenic |
| AAGAGAAAGTGGACCAAAGG+TGG | 0.633631 | 5_1:-16736686 | Msa0720660:CDS |
| AGATCCAGCCAAGAGCCAGA+AGG | 0.636098 | 5_1:-16736656 | Msa0720660:CDS |
| AGCAATGTTATGTTGTGTGT+GGG | 0.636522 | 5_1:-16731674 | Msa0720660:three_prime_UTR |
| TAAGGGAGTTGTACCAGCTG+GGG | 0.637564 | 5_1:+16736540 | None:intergenic |
| AATGGTGTCTCCAACATTGA+AGG | 0.637962 | 5_1:-16733457 | Msa0720660:CDS |
| TCTTGTATTCTGCCTCCAGG+AGG | 0.639299 | 5_1:+16732010 | None:intergenic |
| ACTAAAAGCATACCTGCCAC+CGG | 0.640253 | 5_1:+16732182 | None:intergenic |
| AGCACTGTCACTAACAGCAA+TGG | 0.640876 | 5_1:+16736594 | None:intergenic |
| TCTGGTTCTAATATGGGCAA+AGG | 0.641708 | 5_1:-16733759 | Msa0720660:CDS |
| AGAAAGCTAAAGAGAAACGA+AGG | 0.645233 | 5_1:+16738775 | None:intergenic |
| TAGGTGGCTGGTACTGAGGA+TGG | 0.645802 | 5_1:-16732345 | Msa0720660:CDS |
| TAGGATCAAGAATTTCTGAA+GGG | 0.654771 | 5_1:+16731941 | None:intergenic |
| ACCTGTGAGTAAGCTAACCC+TGG | 0.655761 | 5_1:-16732490 | Msa0720660:CDS |
| CAAGCTGAAAATGTTGCTTG+TGG | 0.656547 | 5_1:+16732312 | None:intergenic |
| AAGCAATGTTATGTTGTGTG+TGG | 0.657330 | 5_1:-16731675 | Msa0720660:three_prime_UTR |
| CAAGCCATCCTGTTGCACCA+TGG | 0.664526 | 5_1:+16732220 | None:intergenic |
| AATGCGACATTGTTGAAGCT+GGG | 0.664858 | 5_1:-16731805 | Msa0720660:CDS |
| GCGACATTGTTGAAGCTGGG+TGG | 0.666561 | 5_1:-16731802 | Msa0720660:CDS |
| ATTGTCAGTGTTGGAAAACG+TGG | 0.669949 | 5_1:-16733244 | Msa0720660:intron |
| CAGACCCCAACTGAAGTAGA+GGG | 0.670526 | 5_1:-16731967 | Msa0720660:CDS |
| ACAGGATGGCTTGTTAACAC+TGG | 0.686381 | 5_1:-16732210 | Msa0720660:CDS |
| CTGCAAGAATCTCTTCTGTG+AGG | 0.694213 | 5_1:+16731719 | None:intergenic |
| AGGGTTAGCTTACTCACAGG+TGG | 0.703538 | 5_1:+16732492 | None:intergenic |
| GGTGTCTCCAACATTGAAGG+TGG | 0.709321 | 5_1:-16733454 | Msa0720660:CDS |
| GCTGAAAAGATGGAGAGCCA+TGG | 0.710111 | 5_1:-16732237 | Msa0720660:CDS |
| TCACAATGGAAGCCTCCTGG+AGG | 0.723196 | 5_1:-16732022 | Msa0720660:CDS |
| TGGTTGGAGCAGGAACATGA+TGG | 0.724922 | 5_1:+16736614 | None:intergenic |
| AATTCTTGATCCTATCAATG+CGG | 0.731649 | 5_1:-16731932 | Msa0720660:intron |
| TTCTCCTAGAGACAAGCGTG+TGG | 0.745257 | 5_1:-16735972 | Msa0720660:CDS |
| TTGGAGCAGGAACATGATGG+TGG | 0.756365 | 5_1:+16736617 | None:intergenic |
| CCTCGGCACACAGTACGCCG+GGG | 0.764331 | 5_1:-16733850 | Msa0720660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTTTTTTTTTTTT+TGG | - | chr5_1:16732628-16732647 | Msa0720660:intron | 0.0% |
| !!! | ATTTTTTTTTTTTTTTTTTT+GGG | - | chr5_1:16732629-16732648 | Msa0720660:intron | 0.0% |
| !! | ATTAATTATTTATTGCAAAA+TGG | - | chr5_1:16733038-16733057 | Msa0720660:intron | 10.0% |
| !! | CAAATAAAAAATTTAACTAA+GGG | + | chr5_1:16733750-16733769 | None:intergenic | 10.0% |
| !!! | TGTTTATTTTTAAATGTTTT+TGG | + | chr5_1:16734875-16734894 | None:intergenic | 10.0% |
| !! | CAAATTATTTATAAATTCAT+TGG | - | chr5_1:16735426-16735445 | Msa0720660:intron | 10.0% |
| !!! | CAAATTTATTAAACTTATTT+TGG | - | chr5_1:16735599-16735618 | Msa0720660:CDS | 10.0% |
| !! | TAAAGTTAAAAAAAAAATGA+AGG | + | chr5_1:16738833-16738852 | None:intergenic | 10.0% |
| !! | TATTCATATCCATAAAAAAT+GGG | - | chr5_1:16732306-16732325 | Msa0720660:CDS | 15.0% |
| !! | AATTAAAGTCAAATAAATGT+AGG | + | chr5_1:16732397-16732416 | None:intergenic | 15.0% |
| !! | ATAAATCAGAAATTATTATG+TGG | - | chr5_1:16732529-16732548 | Msa0720660:CDS | 15.0% |
| !! | TAAATCAGAAATTATTATGT+GGG | - | chr5_1:16732530-16732549 | Msa0720660:CDS | 15.0% |
| !! | AAACTATAATTAAGTTAGAA+GGG | + | chr5_1:16732726-16732745 | None:intergenic | 15.0% |
| !!! | TTTTCATTTTTATTCTTTTG+TGG | - | chr5_1:16733463-16733482 | Msa0720660:CDS | 15.0% |
| !! | CCAAATAAAAAATTTAACTA+AGG | + | chr5_1:16733751-16733770 | None:intergenic | 15.0% |
| !!! | CCTTAGTTAAATTTTTTATT+TGG | - | chr5_1:16733748-16733767 | Msa0720660:CDS | 15.0% |
| !! | AACAAATATCTACATATAAT+TGG | - | chr5_1:16734093-16734112 | Msa0720660:intron | 15.0% |
| !!! | TTTTTTTTTTCTGTTTTGTT+TGG | - | chr5_1:16734155-16734174 | Msa0720660:intron | 15.0% |
| !!! | ATTATTTATCACATCTTTTT+TGG | + | chr5_1:16734760-16734779 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTAGTAAGATAT+GGG | - | chr5_1:16735078-16735097 | Msa0720660:intron | 15.0% |
| !!! | GTAATTATTTTCTTAAAGAA+TGG | + | chr5_1:16735163-16735182 | None:intergenic | 15.0% |
| !!! | TTTTGTTCAAAAGATTATTT+AGG | - | chr5_1:16735475-16735494 | Msa0720660:intron | 15.0% |
| !! | TTAGTTTCAATTTATACTTA+AGG | - | chr5_1:16735532-16735551 | Msa0720660:intron | 15.0% |
| !! | TAGTTTCAATTTATACTTAA+GGG | - | chr5_1:16735533-16735552 | Msa0720660:intron | 15.0% |
| !!! | TCATTTTCTTATAATTCTAA+TGG | - | chr5_1:16736669-16736688 | Msa0720660:CDS | 15.0% |
| !!! | TTCCTTATTTTTTTTGAAAT+AGG | - | chr5_1:16736699-16736718 | Msa0720660:CDS | 15.0% |
| !! | TACCTATTTCAAAAAAAATA+AGG | + | chr5_1:16736704-16736723 | None:intergenic | 15.0% |
| !! | ATATAAAAAACTTTATGTCA+CGG | - | chr5_1:16736916-16736935 | Msa0720660:intron | 15.0% |
| !! | ATTTAATTAAGATGAGTATT+TGG | - | chr5_1:16737096-16737115 | Msa0720660:intron | 15.0% |
| !! | AATCTATATATTATTGTGAA+AGG | - | chr5_1:16737293-16737312 | Msa0720660:intron | 15.0% |
| !!! | AATTATAACCATTTTTATGT+AGG | - | chr5_1:16737888-16737907 | Msa0720660:intron | 15.0% |
| !!! | TTTTAACAGTATTTATGTGT+CGG | + | chr5_1:16731704-16731723 | None:intergenic | 20.0% |
| !!! | ATTTTATAAAAGTGCACTTA+GGG | - | chr5_1:16731833-16731852 | Msa0720660:intron | 20.0% |
| !! | GTATTCATATCCATAAAAAA+TGG | - | chr5_1:16732305-16732324 | Msa0720660:CDS | 20.0% |
| !! | ATTCATATCCATAAAAAATG+GGG | - | chr5_1:16732307-16732326 | Msa0720660:CDS | 20.0% |
| !! | TGTAAAATAGATTGTTTAGA+TGG | - | chr5_1:16732764-16732783 | Msa0720660:intron | 20.0% |
| !! | GAAACTATAATTAAGTTAGA+AGG | + | chr5_1:16732727-16732746 | None:intergenic | 20.0% |
| !!! | TTTTGATAAGACATATGAAA+TGG | - | chr5_1:16733423-16733442 | Msa0720660:CDS | 20.0% |
| !! | ATAAAAAATTTAACTAAGGG+AGG | + | chr5_1:16733747-16733766 | None:intergenic | 20.0% |
| !!! | TTTCAAATAAATTTGCTAGA+GGG | + | chr5_1:16733900-16733919 | None:intergenic | 20.0% |
| !!! | ATTTCAAATAAATTTGCTAG+AGG | + | chr5_1:16733901-16733920 | None:intergenic | 20.0% |
| !! | GTTATACATTTCATTAAGTA+AGG | + | chr5_1:16734076-16734095 | None:intergenic | 20.0% |
| !!! | TATGAAGAACATATACTTTT+AGG | - | chr5_1:16734411-16734430 | Msa0720660:intron | 20.0% |
| !!! | TGCAAATTTTGTAAATTGTA+GGG | - | chr5_1:16734615-16734634 | Msa0720660:intron | 20.0% |
| !! | TTAAGATAATGACATAGAAA+TGG | - | chr5_1:16734932-16734951 | Msa0720660:intron | 20.0% |
| !!! | AAATGTCATTTATTTGCAAA+AGG | - | chr5_1:16735027-16735046 | Msa0720660:intron | 20.0% |
| !!! | CTTTGTATTTTAGTAAGATA+TGG | - | chr5_1:16735077-16735096 | Msa0720660:intron | 20.0% |
| !!! | TTGTATTTTAGTAAGATATG+GGG | - | chr5_1:16735079-16735098 | Msa0720660:intron | 20.0% |
| !! | ATAATACAACAACACATAAA+AGG | + | chr5_1:16735281-16735300 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTGAAATAGGTAC+TGG | - | chr5_1:16736705-16736724 | Msa0720660:CDS | 20.0% |
| !! | GATCATAATAGATATTTGAT+TGG | - | chr5_1:16736747-16736766 | Msa0720660:intron | 20.0% |
| !!! | CTCTTAATTCTTTTGTTTAA+TGG | - | chr5_1:16737122-16737141 | Msa0720660:intron | 20.0% |
| !!! | TTATAATATATTGGTTGGTT+GGG | - | chr5_1:16738636-16738655 | Msa0720660:intron | 20.0% |
| !! | TTTATTTGTATACTACAATG+AGG | + | chr5_1:16738769-16738788 | None:intergenic | 20.0% |
| ! | ATGTAATGTGAAAGACAAAT+AGG | + | chr5_1:16731419-16731438 | None:intergenic | 25.0% |
| !! | TGTTTTCTTTACATGTAGTT+TGG | - | chr5_1:16731578-16731597 | Msa0720660:three_prime_UTR | 25.0% |
| !! | AGTGCACTTTTATAAAATCA+CGG | + | chr5_1:16731831-16731850 | None:intergenic | 25.0% |
| !!! | GATTTTATAAAAGTGCACTT+AGG | - | chr5_1:16731832-16731851 | Msa0720660:intron | 25.0% |
| !!! | ATTGTTTTTGCATTTACAGT+GGG | + | chr5_1:16732109-16732128 | None:intergenic | 25.0% |
| !!! | AATTGTTTTTGCATTTACAG+TGG | + | chr5_1:16732110-16732129 | None:intergenic | 25.0% |
| !! | GCGTAAAAATACCTTTTTAA+TGG | - | chr5_1:16732946-16732965 | Msa0720660:intron | 25.0% |
| !! | CTTCTCTTTTTCCATTAAAA+AGG | + | chr5_1:16732960-16732979 | None:intergenic | 25.0% |
| !! | CCAAAAATTTCGATCTTTTT+AGG | + | chr5_1:16733355-16733374 | None:intergenic | 25.0% |
| !! | CCTAAAAAGATCGAAATTTT+TGG | - | chr5_1:16733352-16733371 | Msa0720660:intron | 25.0% |
| !!! | TTTTCTGTTTTGTTTGGATT+TGG | - | chr5_1:16734161-16734180 | Msa0720660:intron | 25.0% |
| ! | GTACATAATTTGGACAATAT+TGG | - | chr5_1:16734347-16734366 | Msa0720660:intron | 25.0% |
| !!! | GAACATATACTTTTAGGATT+AGG | - | chr5_1:16734417-16734436 | Msa0720660:intron | 25.0% |
| !! | GTGCAAATTTTGTAAATTGT+AGG | - | chr5_1:16734614-16734633 | Msa0720660:intron | 25.0% |
| !! | GCAAATTTTGTAAATTGTAG+GGG | - | chr5_1:16734616-16734635 | Msa0720660:intron | 25.0% |
| ! | AGTTGATTACTTGAATTCTT+TGG | - | chr5_1:16734693-16734712 | Msa0720660:intron | 25.0% |
| ! | AAACTAAAAGAAAAGAAGAG+AGG | + | chr5_1:16734736-16734755 | None:intergenic | 25.0% |
| ! | ATAATATTGTGCCACATAAA+GGG | + | chr5_1:16734995-16735014 | None:intergenic | 25.0% |
| !! | TATTTTCTTAAAGAATGGTG+TGG | + | chr5_1:16735158-16735177 | None:intergenic | 25.0% |
| !!! | ATAGATGCTTTTTTTAATGG+AGG | + | chr5_1:16735321-16735340 | None:intergenic | 25.0% |
| !!! | GAGATAGATGCTTTTTTTAA+TGG | + | chr5_1:16735324-16735343 | None:intergenic | 25.0% |
| ! | AAGATAAATAACTGAGACAA+AGG | + | chr5_1:16735349-16735368 | None:intergenic | 25.0% |
| !! | CTCTTATCTCAGTTAATTTT+TGG | - | chr5_1:16735371-16735390 | Msa0720660:intron | 25.0% |
| !!! | AACTTATTTTGGTTTAGATG+AGG | - | chr5_1:16735610-16735629 | Msa0720660:CDS | 25.0% |
| ! | TCAAACTAATTCATTCCAAT+TGG | - | chr5_1:16735657-16735676 | Msa0720660:intron | 25.0% |
| ! | AAAATTACCAACACTTTGTT+TGG | - | chr5_1:16736039-16736058 | Msa0720660:CDS | 25.0% |
| !!! | TCGACTATTTTTACATACTT+GGG | + | chr5_1:16736211-16736230 | None:intergenic | 25.0% |
| !!! | ATCGACTATTTTTACATACT+TGG | + | chr5_1:16736212-16736231 | None:intergenic | 25.0% |
| ! | ATGTAAAAATAGTCGATAAC+TGG | - | chr5_1:16736215-16736234 | Msa0720660:intron | 25.0% |
| ! | TGTAAAAATAGTCGATAACT+GGG | - | chr5_1:16736216-16736235 | Msa0720660:intron | 25.0% |
| ! | TGTTTCGAAAAATATATACG+CGG | + | chr5_1:16736954-16736973 | None:intergenic | 25.0% |
| ! | TATTCTGATAAATCAGTTAC+AGG | - | chr5_1:16737060-16737079 | Msa0720660:intron | 25.0% |
| ! | AATATAAACCTCCTGTAATA+CGG | - | chr5_1:16737330-16737349 | Msa0720660:intron | 25.0% |
| !! | TCCAAAGAATGTTATTCTTT+TGG | - | chr5_1:16737714-16737733 | Msa0720660:intron | 25.0% |
| ! | TTGTATAATTGAAGCAACAT+TGG | + | chr5_1:16737870-16737889 | None:intergenic | 25.0% |
| !!! | TATAACCATTTTTATGTAGG+TGG | - | chr5_1:16737891-16737910 | Msa0720660:intron | 25.0% |
| ! | ATTATTGATGCTATTCACAA+TGG | - | chr5_1:16738216-16738235 | Msa0720660:CDS | 25.0% |
| !! | AATTGGGCCTTATAATATAT+TGG | - | chr5_1:16738627-16738646 | Msa0720660:intron | 25.0% |
| ! | CAACCAACCAATATATTATA+AGG | + | chr5_1:16738637-16738656 | None:intergenic | 25.0% |
| !! | CTTATAATATATTGGTTGGT+TGG | - | chr5_1:16738635-16738654 | Msa0720660:intron | 25.0% |
| CATCATTATTGCACTTCTTA+TGG | - | chr5_1:16731436-16731455 | Msa0720660:three_prime_UTR | 30.0% | |
| TTTGTTCTGCAGAGAAAAAA+TGG | - | chr5_1:16731979-16731998 | Msa0720660:CDS | 30.0% | |
| AGAGAAAAAATGGCATCAAA+CGG | - | chr5_1:16731989-16732008 | Msa0720660:CDS | 30.0% | |
| AACTGCAACTTCAATCAATT+AGG | - | chr5_1:16732230-16732249 | Msa0720660:CDS | 30.0% | |
| !!! | ATAACACTCCCCATTTTTTA+TGG | + | chr5_1:16732318-16732337 | None:intergenic | 30.0% |
| !! | ATAAAAAATGGGGAGTGTTA+TGG | - | chr5_1:16732317-16732336 | Msa0720660:CDS | 30.0% |
| AAAAGTTTACCACTCAATTG+AGG | - | chr5_1:16732897-16732916 | Msa0720660:intron | 30.0% | |
| ! | TTTTAATAGCCTCAATTGAG+TGG | + | chr5_1:16732909-16732928 | None:intergenic | 30.0% |
| TTAAGTCAATTGAAGACAAG+CGG | - | chr5_1:16733063-16733082 | Msa0720660:intron | 30.0% | |
| GTAAATTATGATCAACCTTC+TGG | + | chr5_1:16733614-16733633 | None:intergenic | 30.0% | |
| AAGGGAGGTTTAGAAATTAA+GGG | + | chr5_1:16733732-16733751 | None:intergenic | 30.0% | |
| TAAGGGAGGTTTAGAAATTA+AGG | + | chr5_1:16733733-16733752 | None:intergenic | 30.0% | |
| AGGTTACTGAAAATGAACTT+TGG | - | chr5_1:16734312-16734331 | Msa0720660:CDS | 30.0% | |
| TTACTGAAAATGAACTTTGG+TGG | - | chr5_1:16734315-16734334 | Msa0720660:CDS | 30.0% | |
| TACTGAAAATGAACTTTGGT+GGG | - | chr5_1:16734316-16734335 | Msa0720660:CDS | 30.0% | |
| GGGAAAGTAAGTACATAATT+TGG | - | chr5_1:16734337-16734356 | Msa0720660:CDS | 30.0% | |
| GTAACAATATGTGTTAGTGT+CGG | + | chr5_1:16734472-16734491 | None:intergenic | 30.0% | |
| TTTCATGGTGAATAGAGAAA+GGG | - | chr5_1:16734669-16734688 | Msa0720660:intron | 30.0% | |
| TTACTTGAATTCTTTGGACA+AGG | - | chr5_1:16734699-16734718 | Msa0720660:intron | 30.0% | |
| CATCACTTTCACACAAAAAA+TGG | - | chr5_1:16734830-16734849 | Msa0720660:intron | 30.0% | |
| AATGTGTCTCATTCATTTCA+TGG | - | chr5_1:16734906-16734925 | Msa0720660:intron | 30.0% | |
| !!! | ATGTTGTCATTTTGTACAAG+TGG | - | chr5_1:16734958-16734977 | Msa0720660:intron | 30.0% |
| !!! | TGTTGTCATTTTGTACAAGT+GGG | - | chr5_1:16734959-16734978 | Msa0720660:intron | 30.0% |
| GATAATATTGTGCCACATAA+AGG | + | chr5_1:16734996-16735015 | None:intergenic | 30.0% | |
| TCACTTAGCAATATGCAAAA+TGG | + | chr5_1:16735118-16735137 | None:intergenic | 30.0% | |
| !!! | GAGGTGGACTAATTTAATTT+TGG | - | chr5_1:16735568-16735587 | Msa0720660:CDS | 30.0% |
| TTATATTGAGCGAAATTTCG+AGG | + | chr5_1:16735778-16735797 | None:intergenic | 30.0% | |
| AACGATATAGGATACTTATC+TGG | + | chr5_1:16736113-16736132 | None:intergenic | 30.0% | |
| TATAAGGCTTTCAACGATAT+AGG | + | chr5_1:16736125-16736144 | None:intergenic | 30.0% | |
| AAGATTAAGATCAATGCTAG+TGG | + | chr5_1:16736362-16736381 | None:intergenic | 30.0% | |
| TTGATCTTAATCTTGCTAGA+AGG | - | chr5_1:16736368-16736387 | Msa0720660:intron | 30.0% | |
| TGATCTTAATCTTGCTAGAA+GGG | - | chr5_1:16736369-16736388 | Msa0720660:intron | 30.0% | |
| !! | TTACACTCTGGTTCTAATAT+GGG | - | chr5_1:16736487-16736506 | Msa0720660:intron | 30.0% |
| GTATATATCTAGTGGAGTAT+AGG | + | chr5_1:16736618-16736637 | None:intergenic | 30.0% | |
| ATGGCTAAGTATATATCTAG+TGG | + | chr5_1:16736626-16736645 | None:intergenic | 30.0% | |
| ACTAGATATATACTTAGCCA+TGG | - | chr5_1:16736625-16736644 | Msa0720660:CDS | 30.0% | |
| TTAGCCATGGATATTAGTTA+TGG | - | chr5_1:16736638-16736657 | Msa0720660:CDS | 30.0% | |
| AAAGCCATAACTAATATCCA+TGG | + | chr5_1:16736645-16736664 | None:intergenic | 30.0% | |
| ATTATGATCAGTAGAAAGAG+TGG | + | chr5_1:16736736-16736755 | None:intergenic | 30.0% | |
| ! | ATGGTTGACTTCATCAAATT+TGG | - | chr5_1:16737141-16737160 | Msa0720660:intron | 30.0% |
| TATTCAATAGCTGACAAAAG+AGG | - | chr5_1:16737191-16737210 | Msa0720660:intron | 30.0% | |
| CATATGAAGTACAACTTGTA+AGG | + | chr5_1:16737265-16737284 | None:intergenic | 30.0% | |
| CAATAAAAAAATTCAGCAGC+TGG | + | chr5_1:16737440-16737459 | None:intergenic | 30.0% | |
| AGAATAACATTCTTTGGATG+AGG | + | chr5_1:16737712-16737731 | None:intergenic | 30.0% | |
| GCCAAAAGAATAACATTCTT+TGG | + | chr5_1:16737718-16737737 | None:intergenic | 30.0% | |
| ! | TACAAGAAGAGTGAGATTTT+TGG | - | chr5_1:16738258-16738277 | Msa0720660:exon | 30.0% |
| TAGGATCAAGAATTTCTGAA+GGG | + | chr5_1:16738314-16738333 | None:intergenic | 30.0% | |
| ATAGGATCAAGAATTTCTGA+AGG | + | chr5_1:16738315-16738334 | None:intergenic | 30.0% | |
| AATTCTTGATCCTATCAATG+CGG | - | chr5_1:16738320-16738339 | Msa0720660:intron | 30.0% | |
| ! | GTGAATAAACGAACTGTTTT+AGG | + | chr5_1:16738354-16738373 | None:intergenic | 30.0% |
| !! | TATCTCGTGTTTTATTACCA+AGG | + | chr5_1:16738376-16738395 | None:intergenic | 30.0% |
| ACCAACTACAAAATTGGAAA+GGG | - | chr5_1:16738501-16738520 | Msa0720660:intron | 30.0% | |
| ATTGCTTCACTTCAAAAGAT+TGG | + | chr5_1:16738564-16738583 | None:intergenic | 30.0% | |
| TTAGGGTGGTAGAATAAATT+GGG | - | chr5_1:16738611-16738630 | Msa0720660:intron | 30.0% | |
| AGAAAGCTAAAGAGAAACGA+AGG | + | chr5_1:16731480-16731499 | None:intergenic | 35.0% | |
| ACATCCTAGCTACAATTCTT+TGG | - | chr5_1:16731522-16731541 | Msa0720660:three_prime_UTR | 35.0% | |
| ATCCAGTGCGTTTGATATTA+CGG | - | chr5_1:16731602-16731621 | Msa0720660:three_prime_UTR | 35.0% | |
| !! | TGTTTGCATGTTTGCTATCA+GGG | + | chr5_1:16731660-16731679 | None:intergenic | 35.0% |
| !! | TTGTTTGCATGTTTGCTATC+AGG | + | chr5_1:16731661-16731680 | None:intergenic | 35.0% |
| ! | GCACTTTTATAAAATCACGG+TGG | + | chr5_1:16731828-16731847 | None:intergenic | 35.0% |
| GAATCTTTGATCTTGAACCA+TGG | - | chr5_1:16731889-16731908 | Msa0720660:intron | 35.0% | |
| !! | GCTTTGTTTGAAACTTTCCA+TGG | + | chr5_1:16731909-16731928 | None:intergenic | 35.0% |
| AAAATGGCATCAAACGGAAA+CGG | - | chr5_1:16731995-16732014 | Msa0720660:CDS | 35.0% | |
| ! | CTTTTCTGTGTCGTGATTTT+TGG | + | chr5_1:16732055-16732074 | None:intergenic | 35.0% |
| TTGATTGAAGTTGCAGTTTC+TGG | + | chr5_1:16732228-16732247 | None:intergenic | 35.0% | |
| GTTATGGTCATGTGAAAAAG+TGG | - | chr5_1:16732333-16732352 | Msa0720660:CDS | 35.0% | |
| CATGTGAAAAAGTGGTAAAG+CGG | - | chr5_1:16732341-16732360 | Msa0720660:CDS | 35.0% | |
| TCTCATCAGTTTCTTAGTCA+AGG | + | chr5_1:16733144-16733163 | None:intergenic | 35.0% | |
| TGACTAAGAAACTGATGAGA+TGG | - | chr5_1:16733144-16733163 | Msa0720660:intron | 35.0% | |
| ! | ACCAAATCAGCGTTTTATCT+TGG | - | chr5_1:16733200-16733219 | Msa0720660:CDS | 35.0% |
| ! | CCAAATCAGCGTTTTATCTT+GGG | - | chr5_1:16733201-16733220 | Msa0720660:CDS | 35.0% |
| TGTACATGTAGTGTACGAAA+TGG | - | chr5_1:16733862-16733881 | Msa0720660:CDS | 35.0% | |
| CAGGCGATAAAATATGAGAA+AGG | - | chr5_1:16734200-16734219 | Msa0720660:intron | 35.0% | |
| ACTGAAAATGAACTTTGGTG+GGG | - | chr5_1:16734317-16734336 | Msa0720660:CDS | 35.0% | |
| !!! | TTTTAGGATTAGGCATGTCT+AGG | - | chr5_1:16734427-16734446 | Msa0720660:intron | 35.0% |
| TCAAACTCAGATATGGATAC+CGG | + | chr5_1:16734551-16734570 | None:intergenic | 35.0% | |
| ATGAAGCTCAAACTCAGATA+TGG | + | chr5_1:16734558-16734577 | None:intergenic | 35.0% | |
| TATCTGAGTTTGAGCTTCAT+AGG | - | chr5_1:16734558-16734577 | Msa0720660:intron | 35.0% | |
| CTTTCATGGTGAATAGAGAA+AGG | - | chr5_1:16734668-16734687 | Msa0720660:intron | 35.0% | |
| ! | GTTTTACTTGACCCTTTATG+TGG | - | chr5_1:16734981-16735000 | Msa0720660:intron | 35.0% |
| ! | TGCGTTTTCTAATGACTTTG+CGG | - | chr5_1:16735052-16735071 | Msa0720660:intron | 35.0% |
| TCTTAAAGAATGGTGTGGAA+TGG | + | chr5_1:16735153-16735172 | None:intergenic | 35.0% | |
| TTATACTTAAGGGTGACTAC+AGG | - | chr5_1:16735543-16735562 | Msa0720660:intron | 35.0% | |
| TGAACGACCAATTCTTGAAT+TGG | - | chr5_1:16735916-16735935 | Msa0720660:intron | 35.0% | |
| GAACGACCAATTCTTGAATT+GGG | - | chr5_1:16735917-16735936 | Msa0720660:intron | 35.0% | |
| TGTTGTGCATGAACAATGAA+TGG | + | chr5_1:16735989-16736008 | None:intergenic | 35.0% | |
| AGAGAAACCAAACAAAGTGT+TGG | + | chr5_1:16736049-16736068 | None:intergenic | 35.0% | |
| TTGTTCCTTGAAGACAAAAG+AGG | - | chr5_1:16736070-16736089 | Msa0720660:intron | 35.0% | |
| GATATAGGATACTTATCTGG+TGG | + | chr5_1:16736110-16736129 | None:intergenic | 35.0% | |
| AAAATAGTCGATAACTGGGT+TGG | - | chr5_1:16736220-16736239 | Msa0720660:intron | 35.0% | |
| GCATTGTATATAGTGAAGTC+CGG | + | chr5_1:16736295-16736314 | None:intergenic | 35.0% | |
| GACTTCACTATATACAATGC+CGG | - | chr5_1:16736295-16736314 | Msa0720660:intron | 35.0% | |
| ATGTCATGTAGTGAGTGAAA+CGG | + | chr5_1:16736336-16736355 | None:intergenic | 35.0% | |
| TAATCTTGCTAGAAGGGAAA+TGG | - | chr5_1:16736375-16736394 | Msa0720660:intron | 35.0% | |
| CATATTAGAACCAGAGTGTA+AGG | + | chr5_1:16736488-16736507 | None:intergenic | 35.0% | |
| !! | CTTACACTCTGGTTCTAATA+TGG | - | chr5_1:16736486-16736505 | Msa0720660:intron | 35.0% |
| CTCAGGTATAGTATTCAATG+TGG | - | chr5_1:16736543-16736562 | Msa0720660:intron | 35.0% | |
| TTGGAGATGATGAACATTGT+TGG | - | chr5_1:16736766-16736785 | Msa0720660:intron | 35.0% | |
| ATAACAACCACCTTCAATGT+TGG | + | chr5_1:16736808-16736827 | None:intergenic | 35.0% | |
| CTAATTGCATTCCAGATATC+AGG | + | chr5_1:16736864-16736883 | None:intergenic | 35.0% | |
| ! | CTGATATCTGGAATGCAATT+AGG | - | chr5_1:16736862-16736881 | Msa0720660:intron | 35.0% |
| ! | ATCTGGAATGCAATTAGGTT+TGG | - | chr5_1:16736867-16736886 | Msa0720660:intron | 35.0% |
| ! | AATGCAATTAGGTTTGGTAC+AGG | - | chr5_1:16736873-16736892 | Msa0720660:intron | 35.0% |
| TCGAAAAATATATACGCGGT+TGG | + | chr5_1:16736950-16736969 | None:intergenic | 35.0% | |
| !! | GGTTTTGTACATGACTAAGA+TGG | - | chr5_1:16737162-16737181 | Msa0720660:intron | 35.0% |
| GTACGAAGTCAACTGTTAAT+TGG | + | chr5_1:16737240-16737259 | None:intergenic | 35.0% | |
| TATCCATAATGCCGTATTAC+AGG | + | chr5_1:16737344-16737363 | None:intergenic | 35.0% | |
| TGTAATACGGCATTATGGAT+AGG | - | chr5_1:16737343-16737362 | Msa0720660:intron | 35.0% | |
| ! | TTATGGATAGGAGTATAGGA+CGG | - | chr5_1:16737355-16737374 | Msa0720660:intron | 35.0% |
| GCTACAAAGGTTTCTTGTAA+AGG | + | chr5_1:16737477-16737496 | None:intergenic | 35.0% | |
| TCTCAACTGATAGTTACATG+TGG | - | chr5_1:16737609-16737628 | Msa0720660:intron | 35.0% | |
| GCATTTGGTATGTACTCTAT+CGG | + | chr5_1:16737670-16737689 | None:intergenic | 35.0% | |
| ACACATGGTAACTTTGCATT+TGG | + | chr5_1:16737685-16737704 | None:intergenic | 35.0% | |
| AATGCAAAGTTACCATGTGT+TGG | - | chr5_1:16737685-16737704 | Msa0720660:intron | 35.0% | |
| CAGTATATCCACTGATGAAA+TGG | + | chr5_1:16737801-16737820 | None:intergenic | 35.0% | |
| !! | GCAACATTTTCAGCTTGTTT+CGG | - | chr5_1:16737946-16737965 | Msa0720660:intron | 35.0% |
| ATGTCAAATCAATGCAGCTA+TGG | - | chr5_1:16738156-16738175 | Msa0720660:CDS | 35.0% | |
| ! | ACTTAGTTTGATACGATTCC+CGG | + | chr5_1:16738184-16738203 | None:intergenic | 35.0% |
| AACAGTTCGTTTATTCACCT+TGG | - | chr5_1:16738356-16738375 | Msa0720660:intron | 35.0% | |
| !! | GTGTTTTTGATGAATTGCAG+TGG | - | chr5_1:16738406-16738425 | Msa0720660:intron | 35.0% |
| ACCTTCACCAACTACAAAAT+TGG | - | chr5_1:16738495-16738514 | Msa0720660:intron | 35.0% | |
| !!! | TCCAATTTTGTAGTTGGTGA+AGG | + | chr5_1:16738499-16738518 | None:intergenic | 35.0% |
| CACCAACTACAAAATTGGAA+AGG | - | chr5_1:16738500-16738519 | Msa0720660:intron | 35.0% | |
| ! | ACCCTTTCCAATTTTGTAGT+TGG | + | chr5_1:16738505-16738524 | None:intergenic | 35.0% |
| AAGCAATGTTATGTTGTGTG+TGG | - | chr5_1:16738577-16738596 | Msa0720660:intron | 35.0% | |
| AGCAATGTTATGTTGTGTGT+GGG | - | chr5_1:16738578-16738597 | Msa0720660:intron | 35.0% | |
| GTTAGGGTGGTAGAATAAAT+TGG | - | chr5_1:16738610-16738629 | Msa0720660:intron | 35.0% | |
| ! | GGGCCTTATAATATATTGGT+TGG | - | chr5_1:16738631-16738650 | Msa0720660:intron | 35.0% |
| AGGATGTTGCTGAGAAAATC+TGG | + | chr5_1:16731509-16731528 | None:intergenic | 40.0% | |
| CGAACCAAAGAATTGTAGCT+AGG | + | chr5_1:16731529-16731548 | None:intergenic | 40.0% | |
| TACGGTGAATTTGTCAAGTG+TGG | - | chr5_1:16731620-16731639 | Msa0720660:three_prime_UTR | 40.0% | |
| ! | ACAGTATTTATGTGTCGGTG+TGG | + | chr5_1:16731699-16731718 | None:intergenic | 40.0% |
| TGACACCAACACGATATTGA+TGG | + | chr5_1:16731745-16731764 | None:intergenic | 40.0% | |
| ! | ACGACACAGAAAAGTGTGAA+TGG | - | chr5_1:16732061-16732080 | Msa0720660:CDS | 40.0% |
| ! | CGACACAGAAAAGTGTGAAT+GGG | - | chr5_1:16732062-16732081 | Msa0720660:CDS | 40.0% |
| GTTCCTGTATTAGGTGTAGA+AGG | + | chr5_1:16732169-16732188 | None:intergenic | 40.0% | |
| GGAGTTGAAGTTCCTGTATT+AGG | + | chr5_1:16732178-16732197 | None:intergenic | 40.0% | |
| TGATCAGAGAGAGTAGCAAA+TGG | + | chr5_1:16732199-16732218 | None:intergenic | 40.0% | |
| AACCTAAAAGGTGGGATTGT+GGG | - | chr5_1:16733101-16733120 | Msa0720660:intron | 40.0% | |
| ! | ATTGTGGGTCCCATTTTATG+TGG | - | chr5_1:16733116-16733135 | Msa0720660:intron | 40.0% |
| AACTGATGAGATGGATCTGA+CGG | - | chr5_1:16733153-16733172 | Msa0720660:intron | 40.0% | |
| ! | CCCAAGATAAAACGCTGATT+TGG | + | chr5_1:16733204-16733223 | None:intergenic | 40.0% |
| GCATCATTGACAAGAGAAAG+TGG | - | chr5_1:16733555-16733574 | Msa0720660:intron | 40.0% | |
| TGGTGTAGAACTATATGAGC+AGG | - | chr5_1:16734181-16734200 | Msa0720660:intron | 40.0% | |
| GGATCATTCATCACTTCCAA+TGG | - | chr5_1:16734221-16734240 | Msa0720660:intron | 40.0% | |
| TCCTAACATTGAGATGGATG+AGG | - | chr5_1:16734642-16734661 | Msa0720660:intron | 40.0% | |
| TCCTCATCCATCTCAATGTT+AGG | + | chr5_1:16734646-16734665 | None:intergenic | 40.0% | |
| TCTCAGCATGATGAATTCTG+AGG | + | chr5_1:16735190-16735209 | None:intergenic | 40.0% | |
| ATGGTGCTCTATACTGTGAA+AGG | + | chr5_1:16735235-16735254 | None:intergenic | 40.0% | |
| TCCAATTGGACAAGTTTGAG+AGG | - | chr5_1:16735671-16735690 | Msa0720660:intron | 40.0% | |
| ACCTCTCAAACTTGTCCAAT+TGG | + | chr5_1:16735675-16735694 | None:intergenic | 40.0% | |
| CTGGATCCCAATTCAAGAAT+TGG | + | chr5_1:16735926-16735945 | None:intergenic | 40.0% | |
| CTGACTTTGATTCTGTTCTC+TGG | + | chr5_1:16735945-16735964 | None:intergenic | 40.0% | |
| GAACAATGAATGGTATGCTC+TGG | + | chr5_1:16735979-16735998 | None:intergenic | 40.0% | |
| TCCTTGAAGACAAAAGAGGT+AGG | - | chr5_1:16736074-16736093 | Msa0720660:intron | 40.0% | |
| ! | ACCTACCTCTTTTGTCTTCA+AGG | + | chr5_1:16736078-16736097 | None:intergenic | 40.0% |
| ACGGTTACATGGAAACTTTC+CGG | + | chr5_1:16736317-16736336 | None:intergenic | 40.0% | |
| TAGTGAGTGAAACGGTTACA+TGG | + | chr5_1:16736328-16736347 | None:intergenic | 40.0% | |
| AGAAGGGAAATGGTTATCCT+CGG | - | chr5_1:16736385-16736404 | Msa0720660:intron | 40.0% | |
| AAGACCTTTCTTCATTTCCC+CGG | + | chr5_1:16736422-16736441 | None:intergenic | 40.0% | |
| AAGGAGAGAATTTGACGCTT+AGG | + | chr5_1:16736469-16736488 | None:intergenic | 40.0% | |
| CAAATTCTCTCCTTACACTC+TGG | - | chr5_1:16736475-16736494 | Msa0720660:intron | 40.0% | |
| !! | TCTGGTTCTAATATGGGCAA+AGG | - | chr5_1:16736493-16736512 | Msa0720660:intron | 40.0% |
| ATCTAGTGGAGTATAGGACA+AGG | + | chr5_1:16736612-16736631 | None:intergenic | 40.0% | |
| GAACATTGTTGGAGTGAGAA+TGG | - | chr5_1:16736777-16736796 | Msa0720660:intron | 40.0% | |
| AATGGTGTCTCCAACATTGA+AGG | - | chr5_1:16736795-16736814 | Msa0720660:intron | 40.0% | |
| ! | CTCTTTTGCATTGTCAGTGT+TGG | - | chr5_1:16736999-16737018 | Msa0720660:intron | 40.0% |
| ! | ATTGTCAGTGTTGGAAAACG+TGG | - | chr5_1:16737008-16737027 | Msa0720660:intron | 40.0% |
| ! | GGCATTATGGATAGGAGTAT+AGG | - | chr5_1:16737351-16737370 | Msa0720660:intron | 40.0% |
| ! | CAAAAGTGTGAGTGCTACAA+AGG | + | chr5_1:16737490-16737509 | None:intergenic | 40.0% |
| TGGTATGTACTCTATCGGAT+AGG | + | chr5_1:16737665-16737684 | None:intergenic | 40.0% | |
| ! | CTTTTGGCATGTGATGCATT+TGG | - | chr5_1:16737730-16737749 | Msa0720660:intron | 40.0% |
| ACCATGTACCATTTCATCAG+TGG | - | chr5_1:16737790-16737809 | Msa0720660:intron | 40.0% | |
| TCCACTGATGAAATGGTACA+TGG | + | chr5_1:16737794-16737813 | None:intergenic | 40.0% | |
| !! | ACCATTTTTATGTAGGTGGC+TGG | - | chr5_1:16737895-16737914 | Msa0720660:intron | 40.0% |
| ACCAGCCACCTACATAAAAA+TGG | + | chr5_1:16737899-16737918 | None:intergenic | 40.0% | |
| ! | TGGTACTGAGGATGGTATAA+AGG | - | chr5_1:16737915-16737934 | Msa0720660:intron | 40.0% |
| ! | CAAGCTGAAAATGTTGCTTG+TGG | + | chr5_1:16737943-16737962 | None:intergenic | 40.0% |
| GCATTGCAGCATACTTTGTA+GGG | + | chr5_1:16737993-16738012 | None:intergenic | 40.0% | |
| AGCATTGCAGCATACTTTGT+AGG | + | chr5_1:16737994-16738013 | None:intergenic | 40.0% | |
| ! | TGCAATGCTTGCTGAAAAGA+TGG | - | chr5_1:16738005-16738024 | Msa0720660:intron | 40.0% |
| AATCAATGCAGCTATGGTAC+CGG | - | chr5_1:16738162-16738181 | Msa0720660:CDS | 40.0% | |
| ! | GGATAACTAACCGCATTGAT+AGG | + | chr5_1:16738333-16738352 | None:intergenic | 40.0% |
| AATGCGACATTGTTGAAGCT+GGG | - | chr5_1:16738447-16738466 | Msa0720660:intron | 40.0% | |
| ! | ATATATTGGTTGGTTGGGTC+AGG | - | chr5_1:16738641-16738660 | Msa0720660:intron | 40.0% |
| CACCGTAATATCAAACGCAC+TGG | + | chr5_1:16731607-16731626 | None:intergenic | 45.0% | |
| CCAACACGATATTGATGGAG+TGG | + | chr5_1:16731740-16731759 | None:intergenic | 45.0% | |
| CCACTCCATCAATATCGTGT+TGG | - | chr5_1:16731737-16731756 | Msa0720660:CDS | 45.0% | |
| GGGATTTGTCACGATGATAG+TGG | - | chr5_1:16732082-16732101 | Msa0720660:CDS | 45.0% | |
| GCACCTTCTACACCTAATAC+AGG | - | chr5_1:16732163-16732182 | Msa0720660:intron | 45.0% | |
| AGACAAGCGGAAAATCCGTT+TGG | - | chr5_1:16733076-16733095 | Msa0720660:intron | 45.0% | |
| GACAAGCGGAAAATCCGTTT+GGG | - | chr5_1:16733077-16733096 | Msa0720660:intron | 45.0% | |
| ATCCGTTTGGGCAACCTAAA+AGG | - | chr5_1:16733089-16733108 | Msa0720660:intron | 45.0% | |
| !!! | CACCTTTTAGGTTGCCCAAA+CGG | + | chr5_1:16733094-16733113 | None:intergenic | 45.0% |
| GTTTGGGCAACCTAAAAGGT+GGG | - | chr5_1:16733093-16733112 | Msa0720660:intron | 45.0% | |
| CAACCTAAAAGGTGGGATTG+TGG | - | chr5_1:16733100-16733119 | Msa0720660:intron | 45.0% | |
| ! | GTCAAGGCGCCACATAAAAT+GGG | + | chr5_1:16733128-16733147 | None:intergenic | 45.0% |
| ! | AGTCAAGGCGCCACATAAAA+TGG | + | chr5_1:16733129-16733148 | None:intergenic | 45.0% |
| GACAAGAGAAAGTGGACCAA+AGG | - | chr5_1:16733563-16733582 | Msa0720660:intron | 45.0% | |
| AAGAGAAAGTGGACCAAAGG+TGG | - | chr5_1:16733566-16733585 | Msa0720660:intron | 45.0% | |
| !! | ATGATCAACCTTCTGGCTCT+TGG | + | chr5_1:16733607-16733626 | None:intergenic | 45.0% |
| CTGTCACTAACAGCAATGGT+TGG | + | chr5_1:16733657-16733676 | None:intergenic | 45.0% | |
| AGCACTGTCACTAACAGCAA+TGG | + | chr5_1:16733661-16733680 | None:intergenic | 45.0% | |
| TTAAGGGAGTTGTACCAGCT+GGG | + | chr5_1:16733716-16733735 | None:intergenic | 45.0% | |
| ATTAAGGGAGTTGTACCAGC+TGG | + | chr5_1:16733717-16733736 | None:intergenic | 45.0% | |
| CATCACTTCCAATGGAGCAA+TGG | - | chr5_1:16734229-16734248 | Msa0720660:intron | 45.0% | |
| ! | AAGTGTTGCCATTGCTCCAT+TGG | + | chr5_1:16734240-16734259 | None:intergenic | 45.0% |
| TTAACCACACGCTTGTCTCT+AGG | + | chr5_1:16734287-16734306 | None:intergenic | 45.0% | |
| TAGAGACAAGCGTGTGGTTA+AGG | - | chr5_1:16734286-16734305 | Msa0720660:CDS | 45.0% | |
| CAAGCGTGTGGTTAAGGATA+AGG | - | chr5_1:16734292-16734311 | Msa0720660:CDS | 45.0% | |
| TGACGTGTTTGTGTTGTGTC+CGG | - | chr5_1:16734529-16734548 | Msa0720660:intron | 45.0% | |
| GGGTTCTCCTAACATTGAGA+TGG | - | chr5_1:16734636-16734655 | Msa0720660:intron | 45.0% | |
| GATGGATGAGGAGACTTTCA+TGG | - | chr5_1:16734654-16734673 | Msa0720660:intron | 45.0% | |
| TTAAGGGTGACTACAGGTTG+AGG | - | chr5_1:16735549-16735568 | Msa0720660:intron | 45.0% | |
| !! | TCGATAACTGGGTTGGTTAC+AGG | - | chr5_1:16736227-16736246 | Msa0720660:intron | 45.0% |
| CCAAAATTCTCCAGCTCTTC+AGG | + | chr5_1:16736268-16736287 | None:intergenic | 45.0% | |
| ! | CCTGAAGAGCTGGAGAATTT+TGG | - | chr5_1:16736265-16736284 | Msa0720660:intron | 45.0% |
| !! | GCTGGAGAATTTTGGTACTC+CGG | - | chr5_1:16736273-16736292 | Msa0720660:intron | 45.0% |
| ! | GGTTCTAATATGGGCAAAGG+TGG | - | chr5_1:16736496-16736515 | Msa0720660:intron | 45.0% |
| ACAAGGAAGGGAACATATCG+GGG | + | chr5_1:16736595-16736614 | None:intergenic | 45.0% | |
| GACAAGGAAGGGAACATATC+GGG | + | chr5_1:16736596-16736615 | None:intergenic | 45.0% | |
| GGACAAGGAAGGGAACATAT+CGG | + | chr5_1:16736597-16736616 | None:intergenic | 45.0% | |
| GTGGAGTATAGGACAAGGAA+GGG | + | chr5_1:16736607-16736626 | None:intergenic | 45.0% | |
| AGTGGAGTATAGGACAAGGA+AGG | + | chr5_1:16736608-16736627 | None:intergenic | 45.0% | |
| ! | CTAAATGCATCGATCTCTCC+CGG | - | chr5_1:16736829-16736848 | Msa0720660:intron | 45.0% |
| ! | TAAATGCATCGATCTCTCCC+GGG | - | chr5_1:16736830-16736849 | Msa0720660:intron | 45.0% |
| AGATATCAGGCTCTTTCTCC+CGG | + | chr5_1:16736851-16736870 | None:intergenic | 45.0% | |
| CCATAATGCCGTATTACAGG+AGG | + | chr5_1:16737341-16737360 | None:intergenic | 45.0% | |
| CCTCCTGTAATACGGCATTA+TGG | - | chr5_1:16737338-16737357 | Msa0720660:intron | 45.0% | |
| TTTGGATGAGGTCCAACACA+TGG | + | chr5_1:16737700-16737719 | None:intergenic | 45.0% | |
| CATCAGTGGATATACTGCTC+TGG | - | chr5_1:16737804-16737823 | Msa0720660:intron | 45.0% | |
| !! | ACAGGATGGCTTGTTAACAC+TGG | - | chr5_1:16738042-16738061 | Msa0720660:CDS | 45.0% |
| !! | GATGGCTTGTTAACACTGGT+TGG | - | chr5_1:16738046-16738065 | Msa0720660:CDS | 45.0% |
| ! | CTTGTTAACACTGGTTGGTC+CGG | - | chr5_1:16738051-16738070 | Msa0720660:CDS | 45.0% |
| ! | ACTAAAAGCATACCTGCCAC+CGG | + | chr5_1:16738073-16738092 | None:intergenic | 45.0% |
| ATCAATGCAGCTATGGTACC+GGG | - | chr5_1:16738163-16738182 | Msa0720660:CDS | 45.0% | |
| TATTCACAATGGAAGCCTCC+TGG | - | chr5_1:16738227-16738246 | Msa0720660:CDS | 45.0% | |
| TCTTCTTGTATTCTGCCTCC+AGG | + | chr5_1:16738248-16738267 | None:intergenic | 45.0% | |
| CAATGCGACATTGTTGAAGC+TGG | - | chr5_1:16738446-16738465 | Msa0720660:intron | 45.0% | |
| CTGCAAGAATCTCTTCTGTG+AGG | + | chr5_1:16738536-16738555 | None:intergenic | 45.0% | |
| ACAGAAGAGATTCTTGCAGC+TGG | - | chr5_1:16738537-16738556 | Msa0720660:intron | 45.0% | |
| GTTATGTTGTGTGTGGGACT+AGG | - | chr5_1:16738584-16738603 | Msa0720660:intron | 45.0% | |
| TGTGTGGGACTAGGATTGTT+AGG | - | chr5_1:16738593-16738612 | Msa0720660:intron | 45.0% | |
| GTGTGGGACTAGGATTGTTA+GGG | - | chr5_1:16738594-16738613 | Msa0720660:intron | 45.0% | |
| !!! | AATTTGTTAATTTTTTTTTT+TGG | + | chr5_1:16735412-16735431 | None:intergenic | 5.0% |
| !!! | TAATACTAAAATTTATTTTA+AGG | + | chr5_1:16735715-16735734 | None:intergenic | 5.0% |
| !!! | AAATAAATTTTAGTATTATT+TGG | - | chr5_1:16735717-16735736 | Msa0720660:intron | 5.0% |
| !! | ACATATATAAATTATATATA+AGG | + | chr5_1:16736141-16736160 | None:intergenic | 5.0% |
| !! | TTATATATGTATAAATAAAA+AGG | - | chr5_1:16736151-16736170 | Msa0720660:intron | 5.0% |
| !! | GGAAGTGCTGCAACAGAGAA+CGG | - | chr5_1:16732016-16732035 | Msa0720660:CDS | 50.0% |
| !! | GAAGTGCTGCAACAGAGAAC+GGG | - | chr5_1:16732017-16732036 | Msa0720660:CDS | 50.0% |
| CGTTTGGGCAACCTAAAAGG+TGG | - | chr5_1:16733092-16733111 | Msa0720660:intron | 50.0% | |
| ! | GACCCACAATCCCACCTTTT+AGG | + | chr5_1:16733106-16733125 | None:intergenic | 50.0% |
| TGCCAAATGCTCTGATTGCG+TGG | - | chr5_1:16733176-16733195 | Msa0720660:intron | 50.0% | |
| GCCAAATGCTCTGATTGCGT+GGG | - | chr5_1:16733177-16733196 | Msa0720660:intron | 50.0% | |
| ! | TCCCACGCAATCAGAGCATT+TGG | + | chr5_1:16733181-16733200 | None:intergenic | 50.0% |
| AAGTGGACCAAAGGTGGTGA+AGG | - | chr5_1:16733572-16733591 | Msa0720660:intron | 50.0% | |
| AGTGGACCAAAGGTGGTGAA+GGG | - | chr5_1:16733573-16733592 | Msa0720660:intron | 50.0% | |
| TTGGAGCAGGAACATGATGG+TGG | + | chr5_1:16733638-16733657 | None:intergenic | 50.0% | |
| TGGTTGGAGCAGGAACATGA+TGG | + | chr5_1:16733641-16733660 | None:intergenic | 50.0% | |
| CTAACAGCAATGGTTGGAGC+AGG | + | chr5_1:16733651-16733670 | None:intergenic | 50.0% | |
| TAAGGGAGTTGTACCAGCTG+GGG | + | chr5_1:16733715-16733734 | None:intergenic | 50.0% | |
| GGAGCAATGGCAACACTTTC+TGG | - | chr5_1:16734242-16734261 | Msa0720660:intron | 50.0% | |
| ! | ACACTTTCTGGTGCCAAGAC+AGG | - | chr5_1:16734254-16734273 | Msa0720660:intron | 50.0% |
| TCTAGGAGAACGACCTGTCT+TGG | + | chr5_1:16734270-16734289 | None:intergenic | 50.0% | |
| TTCTCCTAGAGACAAGCGTG+TGG | - | chr5_1:16734280-16734299 | Msa0720660:CDS | 50.0% | |
| GATTAGGCATGTCTAGGCGT+CGG | - | chr5_1:16734433-16734452 | Msa0720660:intron | 50.0% | |
| ACCATGCCTATGCTGTGCTA+AGG | - | chr5_1:16735250-16735269 | Msa0720660:intron | 50.0% | |
| GACATGCCTTAGCACAGCAT+AGG | + | chr5_1:16735259-16735278 | None:intergenic | 50.0% | |
| GTCGATGACTATGTAACCGC+AGG | - | chr5_1:16735887-16735906 | Msa0720660:intron | 50.0% | |
| TGGTCGTTCACAAACACCTG+CGG | + | chr5_1:16735906-16735925 | None:intergenic | 50.0% | |
| TTCTCCAGCTCTTCAGGACT+GGG | + | chr5_1:16736262-16736281 | None:intergenic | 50.0% | |
| ATTCTCCAGCTCTTCAGGAC+TGG | + | chr5_1:16736263-16736282 | None:intergenic | 50.0% | |
| TACGCCGGGGAAATGAAGAA+AGG | - | chr5_1:16736415-16736434 | Msa0720660:intron | 50.0% | |
| GGCGATGTTGCTCTCTTCTT+TGG | - | chr5_1:16736517-16736536 | Msa0720660:intron | 50.0% | |
| GCTCTCTTCTTTGGACTCTC+AGG | - | chr5_1:16736526-16736545 | Msa0720660:intron | 50.0% | |
| GGTGTCTCCAACATTGAAGG+TGG | - | chr5_1:16736798-16736817 | Msa0720660:intron | 50.0% | |
| GATATCAGGCTCTTTCTCCC+GGG | + | chr5_1:16736850-16736869 | None:intergenic | 50.0% | |
| GGGAGAAAGAGCCTGATATC+TGG | - | chr5_1:16736850-16736869 | Msa0720660:intron | 50.0% | |
| !! | AGGGTTAGCTTACTCACAGG+TGG | + | chr5_1:16737763-16737782 | None:intergenic | 50.0% |
| ACCTGTGAGTAAGCTAACCC+TGG | - | chr5_1:16737762-16737781 | Msa0720660:intron | 50.0% | |
| TATGTAGGTGGCTGGTACTG+AGG | - | chr5_1:16737903-16737922 | Msa0720660:intron | 50.0% | |
| GCTGAAAAGATGGAGAGCCA+TGG | - | chr5_1:16738015-16738034 | Msa0720660:intron | 50.0% | |
| TCTTGTATTCTGCCTCCAGG+AGG | + | chr5_1:16738245-16738264 | None:intergenic | 50.0% | |
| CTACTTCAGTTGGGGTCTGA+AGG | + | chr5_1:16738284-16738303 | None:intergenic | 50.0% | |
| TCAGACCCCAACTGAAGTAG+AGG | - | chr5_1:16738284-16738303 | Msa0720660:intron | 50.0% | |
| CAGACCCCAACTGAAGTAGA+GGG | - | chr5_1:16738285-16738304 | Msa0720660:intron | 50.0% | |
| GACACCCTCTACTTCAGTTG+GGG | + | chr5_1:16738292-16738311 | None:intergenic | 50.0% | |
| GGACACCCTCTACTTCAGTT+GGG | + | chr5_1:16738293-16738312 | None:intergenic | 50.0% | |
| TGGGACTAGGATTGTTAGGG+TGG | - | chr5_1:16738597-16738616 | Msa0720660:intron | 50.0% | |
| GCAACAGAGAACGGGAGCAA+CGG | - | chr5_1:16732025-16732044 | Msa0720660:CDS | 55.0% | |
| CAACAGAGAACGGGAGCAAC+GGG | - | chr5_1:16732026-16732045 | Msa0720660:CDS | 55.0% | |
| GGATCTCCCTTCACCACCTT+TGG | + | chr5_1:16733582-16733601 | None:intergenic | 55.0% | |
| AGATCCAGCCAAGAGCCAGA+AGG | - | chr5_1:16733596-16733615 | Msa0720660:intron | 55.0% | |
| !! | TCAACCTTCTGGCTCTTGGC+TGG | + | chr5_1:16733603-16733622 | None:intergenic | 55.0% |
| CTCTACAATCTCTCCCCAGC+TGG | - | chr5_1:16733699-16733718 | Msa0720660:intron | 55.0% | |
| GCCTTAGCACAGCATAGGCA+TGG | + | chr5_1:16735254-16735273 | None:intergenic | 55.0% | |
| ! | AGGGTGACTACAGGTTGAGG+TGG | - | chr5_1:16735552-16735571 | Msa0720660:intron | 55.0% |
| ! | AGCGCATGGTTGGTTGGAAG+AGG | + | chr5_1:16736572-16736591 | None:intergenic | 55.0% |
| !! | GCCAGGGTTAGCTTACTCAC+AGG | + | chr5_1:16737766-16737785 | None:intergenic | 55.0% |
| ATGGTACATGGTCTGCGCCA+GGG | + | chr5_1:16737782-16737801 | None:intergenic | 55.0% | |
| AATGGTACATGGTCTGCGCC+AGG | + | chr5_1:16737783-16737802 | None:intergenic | 55.0% | |
| ! | TAGGTGGCTGGTACTGAGGA+TGG | - | chr5_1:16737907-16737926 | Msa0720660:intron | 55.0% |
| ATGGAGAGCCATGGTGCAAC+AGG | - | chr5_1:16738024-16738043 | Msa0720660:CDS | 55.0% | |
| AGAGCCATGGTGCAACAGGA+TGG | - | chr5_1:16738028-16738047 | Msa0720660:CDS | 55.0% | |
| CAAGCCATCCTGTTGCACCA+TGG | + | chr5_1:16738035-16738054 | None:intergenic | 55.0% | |
| ! | GTTAACACTGGTTGGTCCGG+TGG | - | chr5_1:16738054-16738073 | Msa0720660:CDS | 55.0% |
| TCACAATGGAAGCCTCCTGG+AGG | - | chr5_1:16738230-16738249 | Msa0720660:CDS | 55.0% | |
| GGGACACCCTCTACTTCAGT+TGG | + | chr5_1:16738294-16738313 | None:intergenic | 55.0% | |
| GCGACATTGTTGAAGCTGGG+TGG | - | chr5_1:16738450-16738469 | Msa0720660:intron | 55.0% | |
| CCAGCTCTTCAGGACTGGGT+CGG | + | chr5_1:16736258-16736277 | None:intergenic | 60.0% | |
| ! | CATATCGGGGAGCGCATGGT+TGG | + | chr5_1:16736582-16736601 | None:intergenic | 60.0% |
| ! | GGAACATATCGGGGAGCGCA+TGG | + | chr5_1:16736586-16736605 | None:intergenic | 60.0% |
| CCGACCCAGTCCTGAAGAGC+TGG | - | chr5_1:16736255-16736274 | Msa0720660:intron | 65.0% | |
| ! | TCGGGGAGCGCATGGTTGGT+TGG | + | chr5_1:16736578-16736597 | None:intergenic | 65.0% |
| ! | ACACTGGTTGGTCCGGTGGC+AGG | - | chr5_1:16738058-16738077 | Msa0720660:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 16731411 | 16738863 | 16731411 | ID=Msa0720660;Name=Msa0720660 |
| chr5_1 | mRNA | 16731411 | 16738863 | 16731411 | ID=Msa0720660-mRNA-1;Parent=Msa0720660;Name=Msa0720660-mRNA-1;_AED=0.10;_eAED=0.10;_QI=140|1|1|1|0.91|0.84|13|291|657 |
| chr5_1 | exon | 16731411 | 16731848 | 16731411 | ID=Msa0720660-mRNA-1:exon:6348;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16731933 | 16732101 | 16731933 | ID=Msa0720660-mRNA-1:exon:6347;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16732195 | 16732364 | 16732195 | ID=Msa0720660-mRNA-1:exon:6346;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16732449 | 16732627 | 16732449 | ID=Msa0720660-mRNA-1:exon:6345;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16733193 | 16733258 | 16733193 | ID=Msa0720660-mRNA-1:exon:6344;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16733380 | 16733553 | 16733380 | ID=Msa0720660-mRNA-1:exon:6343;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16733727 | 16734025 | 16733727 | ID=Msa0720660-mRNA-1:exon:6342;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16734265 | 16734365 | 16734265 | ID=Msa0720660-mRNA-1:exon:6341;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16735554 | 16735638 | 16735554 | ID=Msa0720660-mRNA-1:exon:6340;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16735932 | 16736085 | 16735932 | ID=Msa0720660-mRNA-1:exon:6339;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16736554 | 16736729 | 16736554 | ID=Msa0720660-mRNA-1:exon:6338;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16738023 | 16738283 | 16738023 | ID=Msa0720660-mRNA-1:exon:6337;Parent=Msa0720660-mRNA-1 |
| chr5_1 | exon | 16738731 | 16738863 | 16738731 | ID=Msa0720660-mRNA-1:exon:6336;Parent=Msa0720660-mRNA-1 |
| chr5_1 | five_prime_UTR | 16738731 | 16738863 | 16738731 | ID=Msa0720660-mRNA-1:five_prime_utr;Parent=Msa0720660-mRNA-1 |
| chr5_1 | five_prime_UTR | 16738277 | 16738283 | 16738277 | ID=Msa0720660-mRNA-1:five_prime_utr;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16738023 | 16738276 | 16738023 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16736554 | 16736729 | 16736554 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16735932 | 16736085 | 16735932 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16735554 | 16735638 | 16735554 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16734265 | 16734365 | 16734265 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16733727 | 16734025 | 16733727 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16733380 | 16733553 | 16733380 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16733193 | 16733258 | 16733193 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16732449 | 16732627 | 16732449 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16732195 | 16732364 | 16732195 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16731933 | 16732101 | 16731933 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | CDS | 16731702 | 16731848 | 16731702 | ID=Msa0720660-mRNA-1:cds;Parent=Msa0720660-mRNA-1 |
| chr5_1 | three_prime_UTR | 16731411 | 16731701 | 16731411 | ID=Msa0720660-mRNA-1:three_prime_utr;Parent=Msa0720660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
