Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841800 | XP_013453689.1 | 91.806 | 659 | 8 | 4 | 1 | 614 | 1 | 658 | 0.0 | 1234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841800 | sp|Q9T074|PCKA1_ARATH | 77.661 | 667 | 92 | 8 | 2 | 614 | 8 | 671 | 0.0 | 1042 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841800 | G7KF50 | 91.806 | 659 | 8 | 4 | 1 | 614 | 1 | 658 | 0.0 | 1234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024890 | Msa0841800 | 0.824971 | 6.045128e-54 | -8.615850e-47 |
| Msa0043120 | Msa0841800 | 0.820394 | 7.020743e-53 | -8.615850e-47 |
| Msa0059880 | Msa0841800 | 0.805959 | 1.037737e-49 | -8.615850e-47 |
| Msa0720660 | Msa0841800 | 0.931006 | 7.140267e-94 | -8.615850e-47 |
| Msa0761250 | Msa0841800 | 0.892452 | 1.566328e-74 | -8.615850e-47 |
| Msa0803560 | Msa0841800 | 0.816883 | 4.396300e-52 | -8.615850e-47 |
| Msa0841800 | Msa0948460 | 0.802052 | 6.736925e-49 | -8.615850e-47 |
| Msa0841800 | Msa0985290 | 0.800561 | 1.360231e-48 | -8.615850e-47 |
| Msa0140270 | Msa0841800 | 0.803594 | 3.236528e-49 | -8.615850e-47 |
| Msa0150910 | Msa0841800 | 0.802812 | 4.697484e-49 | -8.615850e-47 |
| Msa0184150 | Msa0841800 | 0.808773 | 2.626827e-50 | -8.615850e-47 |
| Msa0212550 | Msa0841800 | 0.804004 | 2.659365e-49 | -8.615850e-47 |
| Msa0242700 | Msa0841800 | 0.825235 | 5.234551e-54 | -8.615850e-47 |
| Msa0252930 | Msa0841800 | 0.800949 | 1.133521e-48 | -8.615850e-47 |
| Msa0280950 | Msa0841800 | 0.802436 | 5.615526e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841800 | MtrunA17_Chr5g0411471 | 91.806 | 659 | 8 | 4 | 1 | 614 | 1 | 658 | 0.0 | 1234 |
| Msa0841800 | MtrunA17_Chr3g0141011 | 76.104 | 657 | 100 | 7 | 14 | 614 | 26 | 681 | 0.0 | 995 |
| Msa0841800 | MtrunA17_Chr8g0366821 | 79.251 | 641 | 79 | 8 | 22 | 614 | 13 | 647 | 0.0 | 994 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841800 | AT4G37870.1 | 77.661 | 667 | 92 | 8 | 2 | 614 | 8 | 671 | 0.0 | 1042 |
| Msa0841800 | AT5G65690.1 | 72.687 | 681 | 108 | 9 | 1 | 614 | 1 | 670 | 0.0 | 994 |
| Msa0841800 | AT5G65690.4 | 72.687 | 681 | 108 | 9 | 1 | 614 | 1 | 670 | 0.0 | 994 |
| Msa0841800 | AT5G65690.2 | 69.522 | 712 | 108 | 10 | 1 | 614 | 1 | 701 | 0.0 | 977 |
| Msa0841800 | AT5G65690.3 | 72.049 | 576 | 84 | 8 | 1 | 509 | 1 | 566 | 0.0 | 835 |
Find 182 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTGAAGTTGCAGTTTC+TGG | 0.137217 | 5_4:+18473422 | None:intergenic |
| GGAGCAATGGCAACACTTTC+TGG | 0.186986 | 5_4:-18471424 | Msa0841800:CDS |
| GGCGATGTTGCTCTCTTCTT+TGG | 0.196899 | 5_4:-18469141 | Msa0841800:CDS |
| CCTGAAGAGCTGGAGAATTT+TGG | 0.219791 | 5_4:-18469393 | Msa0841800:CDS |
| ACCTTCACCAACTACAAAAT+TGG | 0.225091 | 5_4:-18467156 | Msa0841800:CDS |
| GCCAAAAGAATAACATTCTT+TGG | 0.240576 | 5_4:+18467932 | None:intergenic |
| CCAAAATTCTCCAGCTCTTC+AGG | 0.242891 | 5_4:+18469393 | None:intergenic |
| CTTACACTCTGGTTCCAATA+TGG | 0.243790 | 5_4:-18469172 | Msa0841800:CDS |
| TCCAAAGAATGTTATTCTTT+TGG | 0.252662 | 5_4:-18467933 | Msa0841800:CDS |
| CATCGTTATTGCACTTCTTA+TGG | 0.255333 | 5_4:-18474189 | Msa0841800:five_prime_UTR |
| CTGATATCTGGAATGCAATT+AGG | 0.263491 | 5_4:-18468787 | Msa0841800:CDS |
| ATCGCCACCTTTGCCCATAT+TGG | 0.267671 | 5_4:+18469158 | None:intergenic |
| ACGGTTACATGGAAACTTTC+CGG | 0.288544 | 5_4:+18469344 | None:intergenic |
| TGAACGACCAATTCTTGAAT+TGG | 0.290588 | 5_4:-18469742 | Msa0841800:CDS |
| CTGACTTTGATTCTGTTCTC+TGG | 0.294165 | 5_4:+18469716 | None:intergenic |
| AATGCGGCCTTATAATATAT+TGG | 0.294889 | 5_4:-18467024 | Msa0841800:three_prime_UTR |
| TGTGGAGGACTAGGATTGTT+AGG | 0.296047 | 5_4:-18467058 | Msa0841800:three_prime_UTR |
| GGATCTCCCTTCACCACCTT+TGG | 0.308079 | 5_4:+18472072 | None:intergenic |
| GGAGTTGAAGTTCCTGTATT+AGG | 0.311899 | 5_4:+18473472 | None:intergenic |
| CAACCAACCAATATATTATA+AGG | 0.312697 | 5_4:+18467017 | None:intergenic |
| GTAAATTATGATCAACCTTC+TGG | 0.327850 | 5_4:+18472040 | None:intergenic |
| TTGATCTTAATCTTGCTAGA+AGG | 0.332635 | 5_4:-18469290 | Msa0841800:CDS |
| ATTGCTTCACTTCAAAAGAT+TGG | 0.333898 | 5_4:+18467090 | None:intergenic |
| CAGAGTGTAAGGAGAGAATT+TGG | 0.338311 | 5_4:+18469184 | None:intergenic |
| TATTCTGATAAATCAGTTAC+AGG | 0.344858 | 5_4:-18468588 | Msa0841800:intron |
| CTGGATCCCAATTCAAGAAT+TGG | 0.347042 | 5_4:+18469735 | None:intergenic |
| CTAATTGCATTCCAGATATC+AGG | 0.350357 | 5_4:+18468788 | None:intergenic |
| ACACATGGTAACTTTGCATT+TGG | 0.355254 | 5_4:+18467965 | None:intergenic |
| ACTCAGTTTGATGCGATTCC+CGG | 0.356155 | 5_4:+18467466 | None:intergenic |
| AGGATGTTGCTGAGAAAATC+TGG | 0.363492 | 5_4:+18474119 | None:intergenic |
| GCTCTCTTCTTTGGACTCTC+AGG | 0.378934 | 5_4:-18469132 | Msa0841800:intron |
| CTTATAATATATTGGTTGGT+TGG | 0.380277 | 5_4:-18467016 | Msa0841800:three_prime_UTR |
| TTATAATATATTGGTTGGTT+GGG | 0.384637 | 5_4:-18467015 | Msa0841800:three_prime_UTR |
| GGGAGAAAGAGCCTGATATC+TGG | 0.386458 | 5_4:-18468799 | Msa0841800:CDS |
| TAGAGACAAGCGTGTGGTTA+AGG | 0.386634 | 5_4:-18471380 | Msa0841800:CDS |
| GGATAACTAACCGCATTGAT+AGG | 0.392059 | 5_4:+18467317 | None:intergenic |
| ATCTGGAATGCAATTAGGTT+TGG | 0.396803 | 5_4:-18468782 | Msa0841800:CDS |
| ATGGAGAGCCATGGTGCAAC+AGG | 0.406887 | 5_4:-18467623 | Msa0841800:CDS |
| TAATCTTGCTAGAAGGGAAA+TGG | 0.408462 | 5_4:-18469283 | Msa0841800:CDS |
| ATGTAATGTGAAAGACAAAT+AGG | 0.409825 | 5_4:+18474209 | None:intergenic |
| ATATATTGGTTGGTTGGGTC+AGG | 0.410932 | 5_4:-18467010 | Msa0841800:three_prime_UTR |
| GATCATAATAGATATTTGAT+TGG | 0.411882 | 5_4:-18468902 | Msa0841800:CDS |
| AGATATCAGGCTCTTTCTCC+CGG | 0.413843 | 5_4:+18468801 | None:intergenic |
| AACTGCAACTTCAATCAATT+AGG | 0.415682 | 5_4:-18473417 | Msa0841800:intron |
| TTCTCCAGCTCTTCAGGACT+GGG | 0.416723 | 5_4:+18469399 | None:intergenic |
| TGGTACTGAGGATGGTATAA+AGG | 0.419919 | 5_4:-18467732 | Msa0841800:CDS |
| CAGTATATCCACTGATGAAA+TGG | 0.420627 | 5_4:+18467849 | None:intergenic |
| TCAACCTTCTGGCTCTTGGC+TGG | 0.425374 | 5_4:+18472051 | None:intergenic |
| ATGATCAACCTTCTGGCTCT+TGG | 0.426037 | 5_4:+18472047 | None:intergenic |
| GTGGAGGACTAGGATTGTTA+GGG | 0.435038 | 5_4:-18467057 | Msa0841800:three_prime_UTR |
| GTTCCTGTATTAGGTGTAGA+AGG | 0.436750 | 5_4:+18473481 | None:intergenic |
| AAGTGTTGCCATTGCTCCAT+TGG | 0.439666 | 5_4:+18471429 | None:intergenic |
| ATTCTCCAGCTCTTCAGGAC+TGG | 0.443936 | 5_4:+18469398 | None:intergenic |
| TTACACTCTGGTTCCAATAT+GGG | 0.446622 | 5_4:-18469171 | Msa0841800:CDS |
| CAACAGAGAACGGGAGCAAC+GGG | 0.448119 | 5_4:-18473621 | Msa0841800:CDS |
| TTGGAGATGATGAACATTGT+TGG | 0.450977 | 5_4:-18468883 | Msa0841800:CDS |
| GAACGACCAATTCTTGAATT+GGG | 0.451977 | 5_4:-18469741 | Msa0841800:CDS |
| CAAGCGTGTGGTTAAGGATA+AGG | 0.452105 | 5_4:-18471374 | Msa0841800:intron |
| AGCATTGCAGCATACTTTGT+AGG | 0.462291 | 5_4:+18467656 | None:intergenic |
| CTCTACAATCTCTCCCCAGC+TGG | 0.470396 | 5_4:-18471952 | Msa0841800:intron |
| TATTCACAATGGAAGCCTCC+TGG | 0.470980 | 5_4:-18467420 | Msa0841800:CDS |
| CGGCCTTATAATATATTGGT+TGG | 0.474696 | 5_4:-18467020 | Msa0841800:three_prime_UTR |
| TATGTAGGTGGCTGGTACTG+AGG | 0.482389 | 5_4:-18467744 | Msa0841800:intron |
| GGACACCCTCTACTTCAGTT+GGG | 0.483575 | 5_4:+18467357 | None:intergenic |
| ATTCACAATGGAAGCCTCCT+GGG | 0.488020 | 5_4:-18467419 | Msa0841800:CDS |
| AATGGTACATGGTCTGCGCC+AGG | 0.489790 | 5_4:+18467867 | None:intergenic |
| CTAAATGCATCGATCTCTCC+CGG | 0.489864 | 5_4:-18468820 | Msa0841800:CDS |
| ACACTGGTTGGTCCGGTGGC+AGG | 0.490211 | 5_4:-18467589 | Msa0841800:intron |
| AAGGAGAGAATTTGGCGCTT+AGG | 0.490229 | 5_4:+18469192 | None:intergenic |
| CATATTGGAACCAGAGTGTA+AGG | 0.491290 | 5_4:+18469173 | None:intergenic |
| TCCTCGGCACACAATACGCC+GGG | 0.491543 | 5_4:-18469257 | Msa0841800:CDS |
| CAATGCGACATTGTTGAAGC+TGG | 0.493313 | 5_4:-18467205 | Msa0841800:CDS |
| GAAGTGTTGCAACAGAGAAC+GGG | 0.493568 | 5_4:-18473630 | Msa0841800:CDS |
| CTACTTCAGTTGGGGTCTGA+AGG | 0.499246 | 5_4:+18467366 | None:intergenic |
| ACATCCTAGCTACAATTCCT+TGG | 0.499252 | 5_4:-18474103 | Msa0841800:intron |
| AAGACCTTTCTTCATTTCCC+CGG | 0.500559 | 5_4:+18469239 | None:intergenic |
| ACGACACAGAAAAGTGTGAA+TGG | 0.501173 | 5_4:-18473586 | Msa0841800:CDS |
| GTTGTGTTGTGTGGAGGACT+AGG | 0.502831 | 5_4:-18467067 | Msa0841800:three_prime_UTR |
| AATTAATGCAGCTATGGTAC+CGG | 0.503007 | 5_4:-18467485 | Msa0841800:intron |
| TGATCTTAATCTTGCTAGAA+GGG | 0.503025 | 5_4:-18469289 | Msa0841800:CDS |
| CTTGTTAACACTGGTTGGTC+CGG | 0.504922 | 5_4:-18467596 | Msa0841800:CDS |
| ACACTTTCTGGTGCCAAGAC+AGG | 0.508621 | 5_4:-18471412 | Msa0841800:CDS |
| AGAATAACATTCTTTGGATG+AGG | 0.511311 | 5_4:+18467938 | None:intergenic |
| GCATTTGGTATGTACTCTAT+CGG | 0.512324 | 5_4:+18467980 | None:intergenic |
| TGATCAGAGAGAGTAGCAAA+TGG | 0.515175 | 5_4:+18473451 | None:intergenic |
| CATCAGTGGATATACTGCTC+TGG | 0.515676 | 5_4:-18467843 | Msa0841800:intron |
| CCGACCCAGTCCTGAAGAGC+TGG | 0.516317 | 5_4:-18469403 | Msa0841800:CDS |
| CGACACAGAAAAGTGTGAAT+GGG | 0.516432 | 5_4:-18473585 | Msa0841800:CDS |
| GCATTGCAGCATACTTTGTA+GGG | 0.518322 | 5_4:+18467657 | None:intergenic |
| ACAGAAGAGATTCTTGCAGC+TGG | 0.519195 | 5_4:-18467114 | Msa0841800:CDS |
| TCTAGGAGAACGACCTGTCT+TGG | 0.522767 | 5_4:+18471399 | None:intergenic |
| TGCAATGCTTGCTGAAAAGA+TGG | 0.522791 | 5_4:-18467642 | Msa0841800:CDS |
| GCATCATTGACAAGAGAAAG+TGG | 0.524765 | 5_4:-18472096 | Msa0841800:CDS |
| ACCAACTACAAAATTGGAAA+GGG | 0.529142 | 5_4:-18467150 | Msa0841800:CDS |
| TGGTGTAGAACTATATGAGC+AGG | 0.531503 | 5_4:-18471485 | Msa0841800:intron |
| AAGTGGACCAAAGGTGGTGA+AGG | 0.532921 | 5_4:-18472079 | Msa0841800:CDS |
| TAGTGAGTGAAACGGTTACA+TGG | 0.534817 | 5_4:+18469333 | None:intergenic |
| TTAACCACACGCTTGTCTCT+AGG | 0.537668 | 5_4:+18471382 | None:intergenic |
| GCACCTTCTACACCTAATAC+AGG | 0.542170 | 5_4:-18473484 | Msa0841800:CDS |
| TGTGAAAGACAAATAGGTGA+TGG | 0.545611 | 5_4:+18474215 | None:intergenic |
| GCATTGTATATAGTGAAGTC+CGG | 0.545860 | 5_4:+18469366 | None:intergenic |
| AATGCAATTAGGTTTGGTAC+AGG | 0.548007 | 5_4:-18468776 | Msa0841800:intron |
| GGGACACCCTCTACTTCAGT+TGG | 0.548012 | 5_4:+18467356 | None:intergenic |
| GGATCATTCATCACTTCCAA+TGG | 0.548370 | 5_4:-18471445 | Msa0841800:CDS |
| GAACATTGTTGGAGTGAGAA+TGG | 0.551621 | 5_4:-18468872 | Msa0841800:CDS |
| ATTATTGATGCTATTCACAA+TGG | 0.551643 | 5_4:-18467431 | Msa0841800:CDS |
| GCAACAGAGAACGGGAGCAA+CGG | 0.552813 | 5_4:-18473622 | Msa0841800:CDS |
| GGAAGTGTTGCAACAGAGAA+CGG | 0.555230 | 5_4:-18473631 | Msa0841800:CDS |
| GACTTCACTATATACAATGC+CGG | 0.556176 | 5_4:-18469363 | Msa0841800:CDS |
| CGAACCAAGGAATTGTAGCT+AGG | 0.557818 | 5_4:+18474099 | None:intergenic |
| TTAAGGGAGTTGTACCAGCT+GGG | 0.561260 | 5_4:+18471938 | None:intergenic |
| AAAATGGCATCAAACGGAAA+CGG | 0.562203 | 5_4:-18473652 | Msa0841800:CDS |
| CACCAACTACAAAATTGGAA+AGG | 0.562306 | 5_4:-18467151 | Msa0841800:CDS |
| CAAATTCTCTCCTTACACTC+TGG | 0.566178 | 5_4:-18469183 | Msa0841800:CDS |
| CAGGCGATAAAATATGAGAA+AGG | 0.567458 | 5_4:-18471466 | Msa0841800:CDS |
| GGGATTTGTCACGATGATAG+TGG | 0.568344 | 5_4:-18473565 | Msa0841800:CDS |
| GTTAACACTGGTTGGTCCGG+TGG | 0.568391 | 5_4:-18467593 | Msa0841800:CDS |
| GATATCAGGCTCTTTCTCCC+GGG | 0.569948 | 5_4:+18468802 | None:intergenic |
| CCCCGGCGTATTGTGTGCCG+AGG | 0.572139 | 5_4:+18469256 | None:intergenic |
| GAGGACTAGGATTGTTAGGG+TGG | 0.577430 | 5_4:-18467054 | Msa0841800:three_prime_UTR |
| TGTTGTGCATGAACAATGAA+TGG | 0.579766 | 5_4:+18469672 | None:intergenic |
| ATAGGATCAAGAATTTCTGA+AGG | 0.581378 | 5_4:+18467335 | None:intergenic |
| TCAGACCCCAACTGAAGTAG+AGG | 0.582028 | 5_4:-18467363 | Msa0841800:CDS |
| ATGTCATGTAGTGAGTGAAA+CGG | 0.587227 | 5_4:+18469325 | None:intergenic |
| TTTATTTGTATACTACAATG+AGG | 0.588133 | 5_4:+18466883 | None:intergenic |
| CATCACTTCCAATGGAGCAA+TGG | 0.588910 | 5_4:-18471437 | Msa0841800:CDS |
| GAACAATGAATGGTATGCTC+TGG | 0.589973 | 5_4:+18469682 | None:intergenic |
| GACAAGAGAAAGTGGACCAA+AGG | 0.590224 | 5_4:-18472088 | Msa0841800:CDS |
| CTAACAGCAATGGTTGGAGC+AGG | 0.593955 | 5_4:+18472003 | None:intergenic |
| AATGCAAAGTTACCATGTGT+TGG | 0.595409 | 5_4:-18467962 | Msa0841800:CDS |
| TGAAGCAATGTTGTGTTGTG+TGG | 0.596242 | 5_4:-18467076 | Msa0841800:three_prime_UTR |
| ATTAATGCAGCTATGGTACC+GGG | 0.596656 | 5_4:-18467484 | Msa0841800:intron |
| TGGTATGTACTCTATCGGAT+AGG | 0.597196 | 5_4:+18467985 | None:intergenic |
| AGAAGGGAAATGGTTATCCT+CGG | 0.598433 | 5_4:-18469273 | Msa0841800:CDS |
| GATGGCTTGTTAACACTGGT+TGG | 0.601864 | 5_4:-18467601 | Msa0841800:CDS |
| ATAACAACCACCTTCAATGT+TGG | 0.603993 | 5_4:+18468844 | None:intergenic |
| GGTTCCAATATGGGCAAAGG+TGG | 0.607153 | 5_4:-18469162 | Msa0841800:CDS |
| TTCACAATGGAAGCCTCCTG+GGG | 0.607871 | 5_4:-18467418 | Msa0841800:CDS |
| ATGGTACATGGTCTGCGCCA+GGG | 0.609620 | 5_4:+18467868 | None:intergenic |
| TACGCCGGGGAAATGAAGAA+AGG | 0.609823 | 5_4:-18469243 | Msa0841800:CDS |
| TCCACTGATGAAATGGTACA+TGG | 0.610146 | 5_4:+18467856 | None:intergenic |
| CCAGCTCTTCAGGACTGGGT+CGG | 0.611651 | 5_4:+18469403 | None:intergenic |
| GACACCCTCTACTTCAGTTG+GGG | 0.614848 | 5_4:+18467358 | None:intergenic |
| ATTATGATCAGTAGAAAGAG+TGG | 0.616425 | 5_4:+18468916 | None:intergenic |
| AGTGGACCAAAGGTGGTGAA+GGG | 0.616458 | 5_4:-18472078 | Msa0841800:CDS |
| AAGATTAAGATCAATGCTAG+TGG | 0.617025 | 5_4:+18469299 | None:intergenic |
| TCTGGTTCCAATATGGGCAA+AGG | 0.620236 | 5_4:-18469165 | Msa0841800:CDS |
| TTTGGATGAGGTCCAACACA+TGG | 0.620676 | 5_4:+18467950 | None:intergenic |
| AGAGCCATGGTGCAACAGGA+TGG | 0.624139 | 5_4:-18467619 | Msa0841800:CDS |
| CTGTCACTAACAGCAATGGT+TGG | 0.625090 | 5_4:+18471997 | None:intergenic |
| TAAATGCATCGATCTCTCCC+GGG | 0.625176 | 5_4:-18468819 | Msa0841800:CDS |
| ACCATGTACCATTTCATCAG+TGG | 0.627912 | 5_4:-18467857 | Msa0841800:CDS |
| GCCAGGGTTAGCTTACTCAC+AGG | 0.631139 | 5_4:+18467884 | None:intergenic |
| AAGAGAAAGTGGACCAAAGG+TGG | 0.633631 | 5_4:-18472085 | Msa0841800:CDS |
| AGATCCAGCCAAGAGCCAGA+AGG | 0.636098 | 5_4:-18472055 | Msa0841800:CDS |
| TAAGGGAGTTGTACCAGCTG+GGG | 0.637564 | 5_4:+18471939 | None:intergenic |
| AATGCGACATTGTTGAAGCT+GGG | 0.637634 | 5_4:-18467204 | Msa0841800:CDS |
| AATGGTGTCTCCAACATTGA+AGG | 0.637962 | 5_4:-18468854 | Msa0841800:CDS |
| ACTAAAAGCATACCTGCCAC+CGG | 0.640253 | 5_4:+18467577 | None:intergenic |
| AGCACTGTCACTAACAGCAA+TGG | 0.640876 | 5_4:+18471993 | None:intergenic |
| ATCCTCGGCACACAATACGC+CGG | 0.643837 | 5_4:-18469258 | Msa0841800:CDS |
| TAGGTGGCTGGTACTGAGGA+TGG | 0.645802 | 5_4:-18467740 | Msa0841800:CDS |
| TAGGATCAAGAATTTCTGAA+GGG | 0.654771 | 5_4:+18467336 | None:intergenic |
| ACCTGTGAGTAAGCTAACCC+TGG | 0.655761 | 5_4:-18467885 | Msa0841800:CDS |
| CAAGCTGAAAATGTTGCTTG+TGG | 0.656547 | 5_4:+18467707 | None:intergenic |
| CAAGCCATCCTGTTGCACCA+TGG | 0.664526 | 5_4:+18467615 | None:intergenic |
| GCGACATTGTTGAAGCTGGG+TGG | 0.666561 | 5_4:-18467201 | Msa0841800:CDS |
| ATTGTCAGTGTTGGAAAACG+TGG | 0.669949 | 5_4:-18468640 | Msa0841800:intron |
| AGCAATGTTGTGTTGTGTGG+AGG | 0.670274 | 5_4:-18467073 | Msa0841800:three_prime_UTR |
| CAGACCCCAACTGAAGTAGA+GGG | 0.670526 | 5_4:-18467362 | Msa0841800:CDS |
| ACAGGATGGCTTGTTAACAC+TGG | 0.686381 | 5_4:-18467605 | Msa0841800:CDS |
| CTGCAAGAATCTCTTCTGTG+AGG | 0.694213 | 5_4:+18467118 | None:intergenic |
| TTAGGGTGGTAGAATAAATG+CGG | 0.694305 | 5_4:-18467040 | Msa0841800:three_prime_UTR |
| AGGGTTAGCTTACTCACAGG+TGG | 0.703538 | 5_4:+18467887 | None:intergenic |
| GGTGTCTCCAACATTGAAGG+TGG | 0.709321 | 5_4:-18468851 | Msa0841800:CDS |
| GCTGAAAAGATGGAGAGCCA+TGG | 0.710111 | 5_4:-18467632 | Msa0841800:CDS |
| TGGTTGGAGCAGGAACATGA+TGG | 0.724922 | 5_4:+18472013 | None:intergenic |
| AATTCTTGATCCTATCAATG+CGG | 0.731649 | 5_4:-18467327 | Msa0841800:intron |
| TCACAATGGAAGCCTCCTGG+GGG | 0.734115 | 5_4:-18467417 | Msa0841800:CDS |
| TTCTCCTAGAGACAAGCGTG+TGG | 0.745257 | 5_4:-18471386 | Msa0841800:CDS |
| TTGGAGCAGGAACATGATGG+TGG | 0.756365 | 5_4:+18472016 | None:intergenic |
| CCTCGGCACACAATACGCCG+GGG | 0.757267 | 5_4:-18469256 | Msa0841800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTTATTTTTTTT+GGG | - | chr5_4:18468000-18468019 | Msa0841800:intron | 0.0% |
| !! | ATTAATTATTTATTGCAAAA+TGG | - | chr5_4:18468411-18468430 | Msa0841800:intron | 10.0% |
| !! | CAAATAAAAAATTTAACTAA+GGG | + | chr5_4:18469124-18469143 | None:intergenic | 10.0% |
| !!! | TGTTTATTTTTAAATGTTTT+TGG | + | chr5_4:18470234-18470253 | None:intergenic | 10.0% |
| !! | CAAATTATTTATAAATTCAT+TGG | - | chr5_4:18470793-18470812 | Msa0841800:intron | 10.0% |
| !!! | CAAATTTATTAAACTTATTT+TGG | - | chr5_4:18470966-18470985 | Msa0841800:intron | 10.0% |
| !!! | TTCTTATTATTTTTCTTATT+AGG | - | chr5_4:18472075-18472094 | Msa0841800:CDS | 10.0% |
| !!! | TAGTGATATAATTTTTTTTT+TGG | + | chr5_4:18474181-18474200 | None:intergenic | 10.0% |
| !! | ATTAAGTTAAAAAAAAATGA+AGG | + | chr5_4:18474207-18474226 | None:intergenic | 10.0% |
| !! | TATTCATATCCATAAAAAAT+GGG | - | chr5_4:18467684-18467703 | Msa0841800:CDS | 15.0% |
| !! | AATTAAAGTCAAATAAATGT+AGG | + | chr5_4:18467775-18467794 | None:intergenic | 15.0% |
| !! | ATAAATCAGAAATTATTATG+TGG | - | chr5_4:18467903-18467922 | Msa0841800:CDS | 15.0% |
| !! | TAAATCAGAAATTATTATGT+GGG | - | chr5_4:18467904-18467923 | Msa0841800:CDS | 15.0% |
| !! | AAACTATAATTAAGTTAGAA+GGG | + | chr5_4:18468177-18468196 | None:intergenic | 15.0% |
| !!! | TTTTCATTTTTATTCTTTTG+TGG | - | chr5_4:18468837-18468856 | Msa0841800:CDS | 15.0% |
| !! | CCAAATAAAAAATTTAACTA+AGG | + | chr5_4:18469125-18469144 | None:intergenic | 15.0% |
| !!! | CCTTAGTTAAATTTTTTATT+TGG | - | chr5_4:18469122-18469141 | Msa0841800:intron | 15.0% |
| !! | AACAAATATCTACATATAAT+TGG | - | chr5_4:18469457-18469476 | Msa0841800:intron | 15.0% |
| !!! | ATTATTTATCACATCTTTTT+TGG | + | chr5_4:18470119-18470138 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTAGTAAGATAT+GGG | - | chr5_4:18470437-18470456 | Msa0841800:intron | 15.0% |
| !!! | GTAATTATTTTCTTAAAGAA+TGG | + | chr5_4:18470522-18470541 | None:intergenic | 15.0% |
| !!! | TTTTGTTCAAAAGATTATTT+AGG | - | chr5_4:18470842-18470861 | Msa0841800:intron | 15.0% |
| !! | TTAGTTTCAATTTATACTTA+AGG | - | chr5_4:18470899-18470918 | Msa0841800:intron | 15.0% |
| !! | TAGTTTCAATTTATACTTAA+GGG | - | chr5_4:18470900-18470919 | Msa0841800:intron | 15.0% |
| !!! | TCATTTTCTTATAATTCTAA+TGG | - | chr5_4:18472044-18472063 | Msa0841800:CDS | 15.0% |
| !!! | TATAAAAAACTTTTATGTCA+CGG | - | chr5_4:18472293-18472312 | Msa0841800:intron | 15.0% |
| !! | ATTTAATTAAGATGAGTATT+TGG | - | chr5_4:18472473-18472492 | Msa0841800:intron | 15.0% |
| !! | AATCTATATATTATTGTGAA+AGG | - | chr5_4:18472670-18472689 | Msa0841800:intron | 15.0% |
| !!! | TTAATAATTTGTGTTTTTGA+TGG | - | chr5_4:18473770-18473789 | Msa0841800:intron | 15.0% |
| !!! | ATTTTATAAAAGTGCACTTA+GGG | - | chr5_4:18467219-18467238 | Msa0841800:CDS | 20.0% |
| !! | GTATTCATATCCATAAAAAA+TGG | - | chr5_4:18467683-18467702 | Msa0841800:CDS | 20.0% |
| !! | ATTCATATCCATAAAAAATG+GGG | - | chr5_4:18467685-18467704 | Msa0841800:CDS | 20.0% |
| !! | GAAACTATAATTAAGTTAGA+AGG | + | chr5_4:18468178-18468197 | None:intergenic | 20.0% |
| !!! | CAAAAAATTTCGATCTTTTT+AGG | + | chr5_4:18468728-18468747 | None:intergenic | 20.0% |
| !!! | CTAAAAAGATCGAAATTTTT+TGG | - | chr5_4:18468726-18468745 | Msa0841800:intron | 20.0% |
| !!! | TTTTGATAAGACATATGAAA+TGG | - | chr5_4:18468797-18468816 | Msa0841800:CDS | 20.0% |
| !! | ATAAAAAATTTAACTAAGGG+AGG | + | chr5_4:18469121-18469140 | None:intergenic | 20.0% |
| !!! | TTTCAAATAAATTTGCTAGA+GGG | + | chr5_4:18469269-18469288 | None:intergenic | 20.0% |
| !!! | ATTTCAAATAAATTTGCTAG+AGG | + | chr5_4:18469270-18469289 | None:intergenic | 20.0% |
| !! | GTTATACATTTCATTAAGTA+AGG | + | chr5_4:18469440-18469459 | None:intergenic | 20.0% |
| !!! | TATGAAGAACATATACTTTT+AGG | - | chr5_4:18469770-18469789 | Msa0841800:intron | 20.0% |
| !!! | TGCAAATTTTGTAAATTGTA+GGG | - | chr5_4:18469974-18469993 | Msa0841800:intron | 20.0% |
| !! | TTAAGATAATGACATAGAAA+TGG | - | chr5_4:18470291-18470310 | Msa0841800:intron | 20.0% |
| !!! | CTTTGTATTTTAGTAAGATA+TGG | - | chr5_4:18470436-18470455 | Msa0841800:intron | 20.0% |
| !!! | TTGTATTTTAGTAAGATATG+GGG | - | chr5_4:18470438-18470457 | Msa0841800:intron | 20.0% |
| !! | ATAATACAACAACACATAAA+AGG | + | chr5_4:18470647-18470666 | None:intergenic | 20.0% |
| !!! | AGATAGATGCTTTTTTTTAA+TGG | + | chr5_4:18470690-18470709 | None:intergenic | 20.0% |
| !! | AGTATATATGATATATCTAG+TGG | + | chr5_4:18471993-18472012 | None:intergenic | 20.0% |
| !!! | TTATTTTTCTTATTAGGTAC+TGG | - | chr5_4:18472081-18472100 | Msa0841800:CDS | 20.0% |
| !! | GATCATAATAGATATTTGAT+TGG | - | chr5_4:18472123-18472142 | Msa0841800:intron | 20.0% |
| !!! | CTCTTAATTCTTTTGTTTAA+TGG | - | chr5_4:18472499-18472518 | Msa0841800:intron | 20.0% |
| !! | TTATATAATTGAAGCAACAT+TGG | + | chr5_4:18473248-18473267 | None:intergenic | 20.0% |
| !!! | AATTCTAACCATTTTTATGT+AGG | - | chr5_4:18473266-18473285 | Msa0841800:intron | 20.0% |
| !!! | TTATAATATATTGGTTGGTT+GGG | - | chr5_4:18474010-18474029 | Msa0841800:intron | 20.0% |
| !! | TTTATTTGTATACTACAATG+AGG | + | chr5_4:18474145-18474164 | None:intergenic | 20.0% |
| ! | ATGTAATGTGAAAGACAAAT+AGG | + | chr5_4:18466819-18466838 | None:intergenic | 25.0% |
| !! | TGTTTTCTTTACATGTACTT+TGG | - | chr5_4:18466978-18466997 | Msa0841800:three_prime_UTR | 25.0% |
| !! | AGTGCACTTTTATAAAATCA+CGG | + | chr5_4:18467217-18467236 | None:intergenic | 25.0% |
| !!! | GATTTTATAAAAGTGCACTT+AGG | - | chr5_4:18467218-18467237 | Msa0841800:CDS | 25.0% |
| !!! | ATTGTTTTTGCATTTACAGT+GGG | + | chr5_4:18467487-18467506 | None:intergenic | 25.0% |
| !!! | AATTGTTTTTGCATTTACAG+TGG | + | chr5_4:18467488-18467507 | None:intergenic | 25.0% |
| !!! | ATAATACTCCCCATTTTTTA+TGG | + | chr5_4:18467696-18467715 | None:intergenic | 25.0% |
| !!! | ATAAAAAATGGGGAGTATTA+TGG | - | chr5_4:18467695-18467714 | Msa0841800:CDS | 25.0% |
| !! | GCGTAAAAATACCTTTTTAA+TGG | - | chr5_4:18468319-18468338 | Msa0841800:intron | 25.0% |
| !! | CTTCTCTTTTTCCATTAAAA+AGG | + | chr5_4:18468333-18468352 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTTCTGTTTTGCT+TGG | - | chr5_4:18469514-18469533 | Msa0841800:intron | 25.0% |
| ! | GTACATAATTTGGACAATAT+TGG | - | chr5_4:18469706-18469725 | Msa0841800:CDS | 25.0% |
| !!! | GAACATATACTTTTAGGATT+AGG | - | chr5_4:18469776-18469795 | Msa0841800:intron | 25.0% |
| !! | GTGCAAATTTTGTAAATTGT+AGG | - | chr5_4:18469973-18469992 | Msa0841800:intron | 25.0% |
| !! | GCAAATTTTGTAAATTGTAG+GGG | - | chr5_4:18469975-18469994 | Msa0841800:intron | 25.0% |
| ! | AGTTGATTACTTGAATTCTT+TGG | - | chr5_4:18470052-18470071 | Msa0841800:intron | 25.0% |
| ! | AAACTAAAAGAAAAGAAGAG+AGG | + | chr5_4:18470095-18470114 | None:intergenic | 25.0% |
| ! | ATAATATTGTGCCACATAAA+GGG | + | chr5_4:18470354-18470373 | None:intergenic | 25.0% |
| !! | AAATGTCATTTACTTGCAAA+AGG | - | chr5_4:18470386-18470405 | Msa0841800:intron | 25.0% |
| !! | TATTTTCTTAAAGAATGGTG+TGG | + | chr5_4:18470517-18470536 | None:intergenic | 25.0% |
| !!! | TAGATGCTTTTTTTTAATGG+AGG | + | chr5_4:18470687-18470706 | None:intergenic | 25.0% |
| ! | AAGATAAATAACTGAGACAA+AGG | + | chr5_4:18470716-18470735 | None:intergenic | 25.0% |
| !! | CTCTTATCTCAGTTAATTTT+TGG | - | chr5_4:18470738-18470757 | Msa0841800:intron | 25.0% |
| !!! | AACTTATTTTGGTTTAGATG+AGG | - | chr5_4:18470977-18470996 | Msa0841800:intron | 25.0% |
| ! | TCAAACTAATTCATTCCAAT+TGG | - | chr5_4:18471024-18471043 | Msa0841800:intron | 25.0% |
| ! | AAAATTACCAACACTTTGTT+TGG | - | chr5_4:18471406-18471425 | Msa0841800:CDS | 25.0% |
| !!! | TTGACTATTTTTACGTACTT+GGG | + | chr5_4:18471578-18471597 | None:intergenic | 25.0% |
| !!! | ATTGACTATTTTTACGTACT+TGG | + | chr5_4:18471579-18471598 | None:intergenic | 25.0% |
| ! | ACGTAAAAATAGTCAATAAC+TGG | - | chr5_4:18471582-18471601 | Msa0841800:intron | 25.0% |
| ! | CGTAAAAATAGTCAATAACT+GGG | - | chr5_4:18471583-18471602 | Msa0841800:intron | 25.0% |
| ! | ATATCATATATACTTAGCCA+TGG | - | chr5_4:18471999-18472018 | Msa0841800:CDS | 25.0% |
| ! | TGTTTCGAAAAATATATACG+CGG | + | chr5_4:18472331-18472350 | None:intergenic | 25.0% |
| ! | TATTCTGATAAATCAGTTAC+AGG | - | chr5_4:18472437-18472456 | Msa0841800:intron | 25.0% |
| !! | ATGGTTGACTTTATCAAATT+TGG | - | chr5_4:18472518-18472537 | Msa0841800:intron | 25.0% |
| ! | AATATAAACCTCCTGTATTA+CGG | - | chr5_4:18472707-18472726 | Msa0841800:intron | 25.0% |
| !! | TCCAAAGAATGTTATTCTTT+TGG | - | chr5_4:18473092-18473111 | Msa0841800:intron | 25.0% |
| ! | ATTATTGATGCTATTCACAA+TGG | - | chr5_4:18473594-18473613 | Msa0841800:CDS | 25.0% |
| ! | CAACCAACCAATATATTATA+AGG | + | chr5_4:18474011-18474030 | None:intergenic | 25.0% |
| !! | CTTATAATATATTGGTTGGT+TGG | - | chr5_4:18474009-18474028 | Msa0841800:intron | 25.0% |
| AAAATAAACAGAACGAACCA+AGG | + | chr5_4:18466942-18466961 | None:intergenic | 30.0% | |
| ATCCAGTGTGTTTGATATTA+CGG | - | chr5_4:18467002-18467021 | Msa0841800:three_prime_UTR | 30.0% | |
| TTTGTTCTGCAGAGAAAAAA+TGG | - | chr5_4:18467357-18467376 | Msa0841800:CDS | 30.0% | |
| AGAGAAAAAATGGCATCAAA+CGG | - | chr5_4:18467367-18467386 | Msa0841800:CDS | 30.0% | |
| AACTGCAACTTCAATCAATT+AGG | - | chr5_4:18467608-18467627 | Msa0841800:CDS | 30.0% | |
| ATTATGGTCATGTGAAAAAG+TGG | - | chr5_4:18467711-18467730 | Msa0841800:CDS | 30.0% | |
| AAAAGTTTACCACTCAATTG+AGG | - | chr5_4:18468270-18468289 | Msa0841800:intron | 30.0% | |
| ! | TTTTAATAGCCTCAATTGAG+TGG | + | chr5_4:18468282-18468301 | None:intergenic | 30.0% |
| TTAAGTCAATTGAAGACAAG+CGG | - | chr5_4:18468436-18468455 | Msa0841800:intron | 30.0% | |
| GTAAATTATGATCAACCTTC+TGG | + | chr5_4:18468988-18469007 | None:intergenic | 30.0% | |
| AAGGGAGGTTTAGAAATTAA+GGG | + | chr5_4:18469106-18469125 | None:intergenic | 30.0% | |
| TAAGGGAGGTTTAGAAATTA+AGG | + | chr5_4:18469107-18469126 | None:intergenic | 30.0% | |
| ! | TTTTCTGTTTTGCTTGGATT+TGG | - | chr5_4:18469520-18469539 | Msa0841800:intron | 30.0% |
| AGGTTACTGAAAATGAACTT+TGG | - | chr5_4:18469671-18469690 | Msa0841800:CDS | 30.0% | |
| TTACTGAAAATGAACTTTGG+TGG | - | chr5_4:18469674-18469693 | Msa0841800:CDS | 30.0% | |
| TACTGAAAATGAACTTTGGT+GGG | - | chr5_4:18469675-18469694 | Msa0841800:CDS | 30.0% | |
| GGGAAAGTAAGTACATAATT+TGG | - | chr5_4:18469696-18469715 | Msa0841800:CDS | 30.0% | |
| GTAACAATATGTGTTAGTGT+CGG | + | chr5_4:18469831-18469850 | None:intergenic | 30.0% | |
| TTTCATGGTGAATAGAGAAA+GGG | - | chr5_4:18470028-18470047 | Msa0841800:intron | 30.0% | |
| TTACTTGAATTCTTTGGACA+AGG | - | chr5_4:18470058-18470077 | Msa0841800:intron | 30.0% | |
| CATCACTTTCACACAAAAAA+TGG | - | chr5_4:18470189-18470208 | Msa0841800:intron | 30.0% | |
| AATGTGTCTCATTCATTTCA+TGG | - | chr5_4:18470265-18470284 | Msa0841800:intron | 30.0% | |
| !!! | ATGTTGTCATTTTGTACAAG+TGG | - | chr5_4:18470317-18470336 | Msa0841800:intron | 30.0% |
| !!! | TGTTGTCATTTTGTACAAGT+GGG | - | chr5_4:18470318-18470337 | Msa0841800:intron | 30.0% |
| GATAATATTGTGCCACATAA+AGG | + | chr5_4:18470355-18470374 | None:intergenic | 30.0% | |
| TCACTTAGCAATATGCAAAA+TGG | + | chr5_4:18470477-18470496 | None:intergenic | 30.0% | |
| !!! | GAGGTGGACTAATTTAATTT+TGG | - | chr5_4:18470935-18470954 | Msa0841800:intron | 30.0% |
| TTATATTGAGCGAAATTTCG+AGG | + | chr5_4:18471145-18471164 | None:intergenic | 30.0% | |
| AACGATATAGGATACTTATC+TGG | + | chr5_4:18471480-18471499 | None:intergenic | 30.0% | |
| TATAAGGCTTTCAACGATAT+AGG | + | chr5_4:18471492-18471511 | None:intergenic | 30.0% | |
| AAAATAGTCAATAACTGGGT+TGG | - | chr5_4:18471587-18471606 | Msa0841800:intron | 30.0% | |
| AAGATTAAGATCAATGCTAG+TGG | + | chr5_4:18471729-18471748 | None:intergenic | 30.0% | |
| TTGATCTTAATCTTGCTAGA+AGG | - | chr5_4:18471735-18471754 | Msa0841800:intron | 30.0% | |
| TGATCTTAATCTTGCTAGAA+GGG | - | chr5_4:18471736-18471755 | Msa0841800:intron | 30.0% | |
| TGATATATCTAGTGGAGTAT+AGG | + | chr5_4:18471985-18472004 | None:intergenic | 30.0% | |
| TTAGCCATGGATATTAGTTA+TGG | - | chr5_4:18472012-18472031 | Msa0841800:CDS | 30.0% | |
| AAAGCCATAACTAATATCCA+TGG | + | chr5_4:18472019-18472038 | None:intergenic | 30.0% | |
| ATTATGATCAGTAGAAAGAG+TGG | + | chr5_4:18472112-18472131 | None:intergenic | 30.0% | |
| TATTCAATAGCTGACAAAAG+AGG | - | chr5_4:18472568-18472587 | Msa0841800:intron | 30.0% | |
| CATATGAAGTACAACTTGTA+AGG | + | chr5_4:18472642-18472661 | None:intergenic | 30.0% | |
| CAATAAAAAAATTCAGCAGC+TGG | + | chr5_4:18472817-18472836 | None:intergenic | 30.0% | |
| AGAATAACATTCTTTGGATG+AGG | + | chr5_4:18473090-18473109 | None:intergenic | 30.0% | |
| GCCAAAAGAATAACATTCTT+TGG | + | chr5_4:18473096-18473115 | None:intergenic | 30.0% | |
| !! | TCTAACCATTTTTATGTAGG+TGG | - | chr5_4:18473269-18473288 | Msa0841800:intron | 30.0% |
| ATGTCAAATTAATGCAGCTA+TGG | - | chr5_4:18473534-18473553 | Msa0841800:CDS | 30.0% | |
| ! | TACAAGAAGAGTGAGATTTT+TGG | - | chr5_4:18473636-18473655 | Msa0841800:CDS | 30.0% |
| TAGGATCAAGAATTTCTGAA+GGG | + | chr5_4:18473692-18473711 | None:intergenic | 30.0% | |
| ATAGGATCAAGAATTTCTGA+AGG | + | chr5_4:18473693-18473712 | None:intergenic | 30.0% | |
| AATTCTTGATCCTATCAATG+CGG | - | chr5_4:18473698-18473717 | Msa0841800:intron | 30.0% | |
| ! | GTGAATAAACGAACTGTTTT+AGG | + | chr5_4:18473732-18473751 | None:intergenic | 30.0% |
| ACCAACTACAAAATTGGAAA+GGG | - | chr5_4:18473875-18473894 | Msa0841800:intron | 30.0% | |
| ATTGCTTCACTTCAAAAGAT+TGG | + | chr5_4:18473938-18473957 | None:intergenic | 30.0% | |
| ! | AATGCGGCCTTATAATATAT+TGG | - | chr5_4:18474001-18474020 | Msa0841800:intron | 30.0% |
| CATCGTTATTGCACTTCTTA+TGG | - | chr5_4:18466836-18466855 | Msa0841800:three_prime_UTR | 35.0% | |
| !! | TGTTTGCATGTTTGCTATCA+CGG | + | chr5_4:18467060-18467079 | None:intergenic | 35.0% |
| ACAGTATTTATGTGTCAGTG+TGG | + | chr5_4:18467099-18467118 | None:intergenic | 35.0% | |
| ! | GCACTTTTATAAAATCACGG+TGG | + | chr5_4:18467214-18467233 | None:intergenic | 35.0% |
| GAATCTTTGATCTTGAACCA+TGG | - | chr5_4:18467267-18467286 | Msa0841800:intron | 35.0% | |
| !! | GCTTTGTTTGAAACTTTCCA+TGG | + | chr5_4:18467287-18467306 | None:intergenic | 35.0% |
| AAAATGGCATCAAACGGAAA+CGG | - | chr5_4:18467373-18467392 | Msa0841800:CDS | 35.0% | |
| ! | CTTTTCTGTGTCGTGATTTT+TGG | + | chr5_4:18467433-18467452 | None:intergenic | 35.0% |
| TTGATTGAAGTTGCAGTTTC+TGG | + | chr5_4:18467606-18467625 | None:intergenic | 35.0% | |
| CATGTGAAAAAGTGGTAAAG+CGG | - | chr5_4:18467719-18467738 | Msa0841800:CDS | 35.0% | |
| TCTCATCAGTTTCTTAGTCA+AGG | + | chr5_4:18468517-18468536 | None:intergenic | 35.0% | |
| TGACTAAGAAACTGATGAGA+TGG | - | chr5_4:18468517-18468536 | Msa0841800:intron | 35.0% | |
| ! | ACCAAATCAGCGTTTTATCT+TGG | - | chr5_4:18468573-18468592 | Msa0841800:intron | 35.0% |
| ! | CCAAATCAGCGTTTTATCTT+GGG | - | chr5_4:18468574-18468593 | Msa0841800:intron | 35.0% |
| TGTACATGTAGTGTACGAAA+TGG | - | chr5_4:18469231-18469250 | Msa0841800:CDS | 35.0% | |
| CAGGCGATAAAATATGAGAA+AGG | - | chr5_4:18469559-18469578 | Msa0841800:intron | 35.0% | |
| ACTGAAAATGAACTTTGGTG+GGG | - | chr5_4:18469676-18469695 | Msa0841800:CDS | 35.0% | |
| !!! | TTTTAGGATTAGGCATGTCT+AGG | - | chr5_4:18469786-18469805 | Msa0841800:intron | 35.0% |
| TCAAACTCAGATATGGATAC+CGG | + | chr5_4:18469910-18469929 | None:intergenic | 35.0% | |
| ATGAAGCTCAAACTCAGATA+TGG | + | chr5_4:18469917-18469936 | None:intergenic | 35.0% | |
| TATCTGAGTTTGAGCTTCAT+AGG | - | chr5_4:18469917-18469936 | Msa0841800:intron | 35.0% | |
| CTTTCATGGTGAATAGAGAA+AGG | - | chr5_4:18470027-18470046 | Msa0841800:intron | 35.0% | |
| ! | GTTTTACTTGACCCTTTATG+TGG | - | chr5_4:18470340-18470359 | Msa0841800:intron | 35.0% |
| ! | TGCGTTTTCTAATGACTTTG+CGG | - | chr5_4:18470411-18470430 | Msa0841800:intron | 35.0% |
| TCTTAAAGAATGGTGTGGAA+TGG | + | chr5_4:18470512-18470531 | None:intergenic | 35.0% | |
| TTATACTTAAGGGTGACTAC+AGG | - | chr5_4:18470910-18470929 | Msa0841800:intron | 35.0% | |
| TGAACGACCAATTCTTGAAT+TGG | - | chr5_4:18471283-18471302 | Msa0841800:intron | 35.0% | |
| GAACGACCAATTCTTGAATT+GGG | - | chr5_4:18471284-18471303 | Msa0841800:intron | 35.0% | |
| TGTTGTGCATGAACAATGAA+TGG | + | chr5_4:18471356-18471375 | None:intergenic | 35.0% | |
| AGAGAAACCAAACAAAGTGT+TGG | + | chr5_4:18471416-18471435 | None:intergenic | 35.0% | |
| ! | CTTTTGTTCCTTGAAGACAA+AGG | - | chr5_4:18471434-18471453 | Msa0841800:CDS | 35.0% |
| GATATAGGATACTTATCTGG+TGG | + | chr5_4:18471477-18471496 | None:intergenic | 35.0% | |
| GCATTGTATATAGTGAAGTC+CGG | + | chr5_4:18471662-18471681 | None:intergenic | 35.0% | |
| GACTTCACTATATACAATGC+CGG | - | chr5_4:18471662-18471681 | Msa0841800:intron | 35.0% | |
| ATGTCATGTAGTGAGTGAAA+CGG | + | chr5_4:18471703-18471722 | None:intergenic | 35.0% | |
| TAATCTTGCTAGAAGGGAAA+TGG | - | chr5_4:18471742-18471761 | Msa0841800:intron | 35.0% | |
| ! | TTACACTCTGGTTCCAATAT+GGG | - | chr5_4:18471854-18471873 | Msa0841800:intron | 35.0% |
| TTGGAGATGATGAACATTGT+TGG | - | chr5_4:18472142-18472161 | Msa0841800:intron | 35.0% | |
| ATAACAACCACCTTCAATGT+TGG | + | chr5_4:18472184-18472203 | None:intergenic | 35.0% | |
| CTAATTGCATTCCAGATATC+AGG | + | chr5_4:18472240-18472259 | None:intergenic | 35.0% | |
| ! | CTGATATCTGGAATGCAATT+AGG | - | chr5_4:18472238-18472257 | Msa0841800:intron | 35.0% |
| ! | ATCTGGAATGCAATTAGGTT+TGG | - | chr5_4:18472243-18472262 | Msa0841800:intron | 35.0% |
| ! | AATGCAATTAGGTTTGGTAC+AGG | - | chr5_4:18472249-18472268 | Msa0841800:intron | 35.0% |
| TCGAAAAATATATACGCGGT+TGG | + | chr5_4:18472327-18472346 | None:intergenic | 35.0% | |
| !! | GGTTTTGTACATGACTAAGA+TGG | - | chr5_4:18472539-18472558 | Msa0841800:intron | 35.0% |
| GTACGAAGTCAACTGTTAAT+TGG | + | chr5_4:18472617-18472636 | None:intergenic | 35.0% | |
| TATCCATAATGCCGTAATAC+AGG | + | chr5_4:18472721-18472740 | None:intergenic | 35.0% | |
| TGTATTACGGCATTATGGAT+AGG | - | chr5_4:18472720-18472739 | Msa0841800:intron | 35.0% | |
| ! | TTATGGATAGGAGTATAGGA+CGG | - | chr5_4:18472732-18472751 | Msa0841800:intron | 35.0% |
| TCTCAACTGATAGTTACATG+TGG | - | chr5_4:18472986-18473005 | Msa0841800:intron | 35.0% | |
| GCATTTGGTATGTACTCTAT+CGG | + | chr5_4:18473048-18473067 | None:intergenic | 35.0% | |
| ACACATGGTAACTTTGCATT+TGG | + | chr5_4:18473063-18473082 | None:intergenic | 35.0% | |
| AATGCAAAGTTACCATGTGT+TGG | - | chr5_4:18473063-18473082 | Msa0841800:intron | 35.0% | |
| CAGTATATCCACTGATGAAA+TGG | + | chr5_4:18473179-18473198 | None:intergenic | 35.0% | |
| !! | GCAACATTTTCAGCTTGTTT+CGG | - | chr5_4:18473324-18473343 | Msa0841800:intron | 35.0% |
| AATTAATGCAGCTATGGTAC+CGG | - | chr5_4:18473540-18473559 | Msa0841800:CDS | 35.0% | |
| ACCTTCACCAACTACAAAAT+TGG | - | chr5_4:18473869-18473888 | Msa0841800:intron | 35.0% | |
| !!! | TCCAATTTTGTAGTTGGTGA+AGG | + | chr5_4:18473873-18473892 | None:intergenic | 35.0% |
| CACCAACTACAAAATTGGAA+AGG | - | chr5_4:18473874-18473893 | Msa0841800:intron | 35.0% | |
| ! | ACCCTTTCCAATTTTGTAGT+TGG | + | chr5_4:18473879-18473898 | None:intergenic | 35.0% |
| TTAGGGTGGTAGAATAAATG+CGG | - | chr5_4:18473985-18474004 | Msa0841800:intron | 35.0% | |
| ! | CGGCCTTATAATATATTGGT+TGG | - | chr5_4:18474005-18474024 | Msa0841800:intron | 35.0% |
| AGGATGTTGCTGAGAAAATC+TGG | + | chr5_4:18466909-18466928 | None:intergenic | 40.0% | |
| ACATCCTAGCTACAATTCCT+TGG | - | chr5_4:18466922-18466941 | Msa0841800:three_prime_UTR | 40.0% | |
| CACCGTAATATCAAACACAC+TGG | + | chr5_4:18467007-18467026 | None:intergenic | 40.0% | |
| TGCTATCACGGAAGATTTGT+CGG | + | chr5_4:18467048-18467067 | None:intergenic | 40.0% | |
| ! | ACGACACAGAAAAGTGTGAA+TGG | - | chr5_4:18467439-18467458 | Msa0841800:CDS | 40.0% |
| ! | CGACACAGAAAAGTGTGAAT+GGG | - | chr5_4:18467440-18467459 | Msa0841800:CDS | 40.0% |
| GTTCCTGTATTAGGTGTAGA+AGG | + | chr5_4:18467547-18467566 | None:intergenic | 40.0% | |
| GGAGTTGAAGTTCCTGTATT+AGG | + | chr5_4:18467556-18467575 | None:intergenic | 40.0% | |
| TGATCAGAGAGAGTAGCAAA+TGG | + | chr5_4:18467577-18467596 | None:intergenic | 40.0% | |
| AACCTAAAAGGTGGGATTGT+GGG | - | chr5_4:18468474-18468493 | Msa0841800:intron | 40.0% | |
| ! | ATTGTGGGTCCCATTTTATG+TGG | - | chr5_4:18468489-18468508 | Msa0841800:intron | 40.0% |
| AACTGATGAGATGGATCTGA+CGG | - | chr5_4:18468526-18468545 | Msa0841800:intron | 40.0% | |
| ! | CCCAAGATAAAACGCTGATT+TGG | + | chr5_4:18468577-18468596 | None:intergenic | 40.0% |
| GCATCATTGACAAGAGAAAG+TGG | - | chr5_4:18468929-18468948 | Msa0841800:CDS | 40.0% | |
| TGGTGTAGAACTATATGAGC+AGG | - | chr5_4:18469540-18469559 | Msa0841800:intron | 40.0% | |
| GGATCATTCATCACTTCCAA+TGG | - | chr5_4:18469580-18469599 | Msa0841800:intron | 40.0% | |
| TCCTAACATTGAGATGGATG+AGG | - | chr5_4:18470001-18470020 | Msa0841800:intron | 40.0% | |
| TCCTCATCCATCTCAATGTT+AGG | + | chr5_4:18470005-18470024 | None:intergenic | 40.0% | |
| TCTCAGCATGATGAATTCTG+AGG | + | chr5_4:18470549-18470568 | None:intergenic | 40.0% | |
| ATGGTGCTCTATACTGTGAA+AGG | + | chr5_4:18470601-18470620 | None:intergenic | 40.0% | |
| TCCAATTGGACAAGTTTGAG+AGG | - | chr5_4:18471038-18471057 | Msa0841800:intron | 40.0% | |
| ACCTCTCAAACTTGTCCAAT+TGG | + | chr5_4:18471042-18471061 | None:intergenic | 40.0% | |
| CTGGATCCCAATTCAAGAAT+TGG | + | chr5_4:18471293-18471312 | None:intergenic | 40.0% | |
| CTGACTTTGATTCTGTTCTC+TGG | + | chr5_4:18471312-18471331 | None:intergenic | 40.0% | |
| GAACAATGAATGGTATGCTC+TGG | + | chr5_4:18471346-18471365 | None:intergenic | 40.0% | |
| TTGTTCCTTGAAGACAAAGG+AGG | - | chr5_4:18471437-18471456 | Msa0841800:CDS | 40.0% | |
| !! | TCAATAACTGGGTTGGTTAC+AGG | - | chr5_4:18471594-18471613 | Msa0841800:intron | 40.0% |
| ACGGTTACATGGAAACTTTC+CGG | + | chr5_4:18471684-18471703 | None:intergenic | 40.0% | |
| TAGTGAGTGAAACGGTTACA+TGG | + | chr5_4:18471695-18471714 | None:intergenic | 40.0% | |
| AGAAGGGAAATGGTTATCCT+CGG | - | chr5_4:18471752-18471771 | Msa0841800:intron | 40.0% | |
| AAGACCTTTCTTCATTTCCC+CGG | + | chr5_4:18471789-18471808 | None:intergenic | 40.0% | |
| CAGAGTGTAAGGAGAGAATT+TGG | + | chr5_4:18471844-18471863 | None:intergenic | 40.0% | |
| CAAATTCTCTCCTTACACTC+TGG | - | chr5_4:18471842-18471861 | Msa0841800:intron | 40.0% | |
| CATATTGGAACCAGAGTGTA+AGG | + | chr5_4:18471855-18471874 | None:intergenic | 40.0% | |
| ! | CTTACACTCTGGTTCCAATA+TGG | - | chr5_4:18471853-18471872 | Msa0841800:intron | 40.0% |
| ATCTAGTGGAGTATAGGACA+AGG | + | chr5_4:18471979-18471998 | None:intergenic | 40.0% | |
| GAACATTGTTGGAGTGAGAA+TGG | - | chr5_4:18472153-18472172 | Msa0841800:intron | 40.0% | |
| AATGGTGTCTCCAACATTGA+AGG | - | chr5_4:18472171-18472190 | Msa0841800:intron | 40.0% | |
| ! | CTCTTTTGCATTGTCAGTGT+TGG | - | chr5_4:18472376-18472395 | Msa0841800:intron | 40.0% |
| ! | ATTGTCAGTGTTGGAAAACG+TGG | - | chr5_4:18472385-18472404 | Msa0841800:intron | 40.0% |
| ! | GGCATTATGGATAGGAGTAT+AGG | - | chr5_4:18472728-18472747 | Msa0841800:intron | 40.0% |
| GCTACAGAGGTTTCTTGTAA+AGG | + | chr5_4:18472854-18472873 | None:intergenic | 40.0% | |
| TGGTATGTACTCTATCGGAT+AGG | + | chr5_4:18473043-18473062 | None:intergenic | 40.0% | |
| ! | CTTTTGGCATGTGATGCATT+TGG | - | chr5_4:18473108-18473127 | Msa0841800:intron | 40.0% |
| ACCATGTACCATTTCATCAG+TGG | - | chr5_4:18473168-18473187 | Msa0841800:intron | 40.0% | |
| TCCACTGATGAAATGGTACA+TGG | + | chr5_4:18473172-18473191 | None:intergenic | 40.0% | |
| !! | ACCATTTTTATGTAGGTGGC+TGG | - | chr5_4:18473273-18473292 | Msa0841800:intron | 40.0% |
| ACCAGCCACCTACATAAAAA+TGG | + | chr5_4:18473277-18473296 | None:intergenic | 40.0% | |
| ! | TGGTACTGAGGATGGTATAA+AGG | - | chr5_4:18473293-18473312 | Msa0841800:intron | 40.0% |
| ! | CAAGCTGAAAATGTTGCTTG+TGG | + | chr5_4:18473321-18473340 | None:intergenic | 40.0% |
| GCATTGCAGCATACTTTGTA+GGG | + | chr5_4:18473371-18473390 | None:intergenic | 40.0% | |
| AGCATTGCAGCATACTTTGT+AGG | + | chr5_4:18473372-18473391 | None:intergenic | 40.0% | |
| ! | TGCAATGCTTGCTGAAAAGA+TGG | - | chr5_4:18473383-18473402 | Msa0841800:intron | 40.0% |
| ATTAATGCAGCTATGGTACC+GGG | - | chr5_4:18473541-18473560 | Msa0841800:CDS | 40.0% | |
| ! | GGATAACTAACCGCATTGAT+AGG | + | chr5_4:18473711-18473730 | None:intergenic | 40.0% |
| !!! | GTGTTTTTGATGGATTGCAG+TGG | - | chr5_4:18473780-18473799 | Msa0841800:intron | 40.0% |
| AATGCGACATTGTTGAAGCT+GGG | - | chr5_4:18473821-18473840 | Msa0841800:intron | 40.0% | |
| TGAAGCAATGTTGTGTTGTG+TGG | - | chr5_4:18473949-18473968 | Msa0841800:intron | 40.0% | |
| ! | ATATATTGGTTGGTTGGGTC+AGG | - | chr5_4:18474015-18474034 | Msa0841800:intron | 40.0% |
| CGAACCAAGGAATTGTAGCT+AGG | + | chr5_4:18466929-18466948 | None:intergenic | 45.0% | |
| CCACTCCATCAATATCGTGT+CGG | - | chr5_4:18467137-18467156 | Msa0841800:CDS | 45.0% | |
| TGACACCGACACGATATTGA+TGG | + | chr5_4:18467145-18467164 | None:intergenic | 45.0% | |
| !! | GGAAGTGTTGCAACAGAGAA+CGG | - | chr5_4:18467394-18467413 | Msa0841800:CDS | 45.0% |
| !! | GAAGTGTTGCAACAGAGAAC+GGG | - | chr5_4:18467395-18467414 | Msa0841800:CDS | 45.0% |
| GGGATTTGTCACGATGATAG+TGG | - | chr5_4:18467460-18467479 | Msa0841800:CDS | 45.0% | |
| GCACCTTCTACACCTAATAC+AGG | - | chr5_4:18467541-18467560 | Msa0841800:intron | 45.0% | |
| AGACAAGCGGAAAATCCGTT+TGG | - | chr5_4:18468449-18468468 | Msa0841800:intron | 45.0% | |
| GACAAGCGGAAAATCCGTTT+GGG | - | chr5_4:18468450-18468469 | Msa0841800:intron | 45.0% | |
| ATCCGTTTGGGCAACCTAAA+AGG | - | chr5_4:18468462-18468481 | Msa0841800:intron | 45.0% | |
| !!! | CACCTTTTAGGTTGCCCAAA+CGG | + | chr5_4:18468467-18468486 | None:intergenic | 45.0% |
| GTTTGGGCAACCTAAAAGGT+GGG | - | chr5_4:18468466-18468485 | Msa0841800:intron | 45.0% | |
| CAACCTAAAAGGTGGGATTG+TGG | - | chr5_4:18468473-18468492 | Msa0841800:intron | 45.0% | |
| ! | GTCAAGGCGCCACATAAAAT+GGG | + | chr5_4:18468501-18468520 | None:intergenic | 45.0% |
| ! | AGTCAAGGCGCCACATAAAA+TGG | + | chr5_4:18468502-18468521 | None:intergenic | 45.0% |
| GACAAGAGAAAGTGGACCAA+AGG | - | chr5_4:18468937-18468956 | Msa0841800:intron | 45.0% | |
| AAGAGAAAGTGGACCAAAGG+TGG | - | chr5_4:18468940-18468959 | Msa0841800:intron | 45.0% | |
| !! | ATGATCAACCTTCTGGCTCT+TGG | + | chr5_4:18468981-18469000 | None:intergenic | 45.0% |
| CTGTCACTAACAGCAATGGT+TGG | + | chr5_4:18469031-18469050 | None:intergenic | 45.0% | |
| AGCACTGTCACTAACAGCAA+TGG | + | chr5_4:18469035-18469054 | None:intergenic | 45.0% | |
| TTAAGGGAGTTGTACCAGCT+GGG | + | chr5_4:18469090-18469109 | None:intergenic | 45.0% | |
| ATTAAGGGAGTTGTACCAGC+TGG | + | chr5_4:18469091-18469110 | None:intergenic | 45.0% | |
| CATCACTTCCAATGGAGCAA+TGG | - | chr5_4:18469588-18469607 | Msa0841800:intron | 45.0% | |
| ! | AAGTGTTGCCATTGCTCCAT+TGG | + | chr5_4:18469599-18469618 | None:intergenic | 45.0% |
| TTAACCACACGCTTGTCTCT+AGG | + | chr5_4:18469646-18469665 | None:intergenic | 45.0% | |
| TAGAGACAAGCGTGTGGTTA+AGG | - | chr5_4:18469645-18469664 | Msa0841800:intron | 45.0% | |
| CAAGCGTGTGGTTAAGGATA+AGG | - | chr5_4:18469651-18469670 | Msa0841800:intron | 45.0% | |
| TGACGTGTTTGTGTTGTGTC+CGG | - | chr5_4:18469888-18469907 | Msa0841800:intron | 45.0% | |
| GGGTTCTCCTAACATTGAGA+TGG | - | chr5_4:18469995-18470014 | Msa0841800:intron | 45.0% | |
| GATGGATGAGGAGACTTTCA+TGG | - | chr5_4:18470013-18470032 | Msa0841800:intron | 45.0% | |
| TTAAGGGTGACTACAGGTTG+AGG | - | chr5_4:18470916-18470935 | Msa0841800:intron | 45.0% | |
| TCCTTGAAGACAAAGGAGGT+AGG | - | chr5_4:18471441-18471460 | Msa0841800:CDS | 45.0% | |
| ACCTACCTCCTTTGTCTTCA+AGG | + | chr5_4:18471445-18471464 | None:intergenic | 45.0% | |
| CCAAAATTCTCCAGCTCTTC+AGG | + | chr5_4:18471635-18471654 | None:intergenic | 45.0% | |
| ! | CCTGAAGAGCTGGAGAATTT+TGG | - | chr5_4:18471632-18471651 | Msa0841800:intron | 45.0% |
| !! | GCTGGAGAATTTTGGTACTC+CGG | - | chr5_4:18471640-18471659 | Msa0841800:intron | 45.0% |
| AAGGAGAGAATTTGGCGCTT+AGG | + | chr5_4:18471836-18471855 | None:intergenic | 45.0% | |
| ! | TCTGGTTCCAATATGGGCAA+AGG | - | chr5_4:18471860-18471879 | Msa0841800:intron | 45.0% |
| ACAAGGAAGGGAACATATCG+GGG | + | chr5_4:18471962-18471981 | None:intergenic | 45.0% | |
| GACAAGGAAGGGAACATATC+GGG | + | chr5_4:18471963-18471982 | None:intergenic | 45.0% | |
| GGACAAGGAAGGGAACATAT+CGG | + | chr5_4:18471964-18471983 | None:intergenic | 45.0% | |
| GTGGAGTATAGGACAAGGAA+GGG | + | chr5_4:18471974-18471993 | None:intergenic | 45.0% | |
| AGTGGAGTATAGGACAAGGA+AGG | + | chr5_4:18471975-18471994 | None:intergenic | 45.0% | |
| ! | CTAAATGCATCGATCTCTCC+CGG | - | chr5_4:18472205-18472224 | Msa0841800:intron | 45.0% |
| ! | TAAATGCATCGATCTCTCCC+GGG | - | chr5_4:18472206-18472225 | Msa0841800:intron | 45.0% |
| AGATATCAGGCTCTTTCTCC+CGG | + | chr5_4:18472227-18472246 | None:intergenic | 45.0% | |
| CCATAATGCCGTAATACAGG+AGG | + | chr5_4:18472718-18472737 | None:intergenic | 45.0% | |
| CCTCCTGTATTACGGCATTA+TGG | - | chr5_4:18472715-18472734 | Msa0841800:intron | 45.0% | |
| ! | CAAAAGTGTGAGTGCTACAG+AGG | + | chr5_4:18472867-18472886 | None:intergenic | 45.0% |
| TTTGGATGAGGTCCAACACA+TGG | + | chr5_4:18473078-18473097 | None:intergenic | 45.0% | |
| CATCAGTGGATATACTGCTC+TGG | - | chr5_4:18473182-18473201 | Msa0841800:intron | 45.0% | |
| !! | ACAGGATGGCTTGTTAACAC+TGG | - | chr5_4:18473420-18473439 | Msa0841800:CDS | 45.0% |
| !! | GATGGCTTGTTAACACTGGT+TGG | - | chr5_4:18473424-18473443 | Msa0841800:CDS | 45.0% |
| ! | CTTGTTAACACTGGTTGGTC+CGG | - | chr5_4:18473429-18473448 | Msa0841800:CDS | 45.0% |
| ! | ACTAAAAGCATACCTGCCAC+CGG | + | chr5_4:18473451-18473470 | None:intergenic | 45.0% |
| ACTCAGTTTGATGCGATTCC+CGG | + | chr5_4:18473562-18473581 | None:intergenic | 45.0% | |
| TATTCACAATGGAAGCCTCC+TGG | - | chr5_4:18473605-18473624 | Msa0841800:CDS | 45.0% | |
| ATTCACAATGGAAGCCTCCT+GGG | - | chr5_4:18473606-18473625 | Msa0841800:CDS | 45.0% | |
| CAATGCGACATTGTTGAAGC+TGG | - | chr5_4:18473820-18473839 | Msa0841800:intron | 45.0% | |
| CTGCAAGAATCTCTTCTGTG+AGG | + | chr5_4:18473910-18473929 | None:intergenic | 45.0% | |
| ACAGAAGAGATTCTTGCAGC+TGG | - | chr5_4:18473911-18473930 | Msa0841800:intron | 45.0% | |
| AGCAATGTTGTGTTGTGTGG+AGG | - | chr5_4:18473952-18473971 | Msa0841800:intron | 45.0% | |
| TGTGGAGGACTAGGATTGTT+AGG | - | chr5_4:18473967-18473986 | Msa0841800:intron | 45.0% | |
| GTGGAGGACTAGGATTGTTA+GGG | - | chr5_4:18473968-18473987 | Msa0841800:intron | 45.0% | |
| !!! | GTTTATTTTTTTATTTTTTT+TGG | - | chr5_4:18467999-18468018 | Msa0841800:intron | 5.0% |
| !!! | AATTTGTTAATTTTTTTTTT+TGG | + | chr5_4:18470779-18470798 | None:intergenic | 5.0% |
| !!! | TAATACTAAAATTTATTTTA+AGG | + | chr5_4:18471082-18471101 | None:intergenic | 5.0% |
| !!! | AAATAAATTTTAGTATTATT+TGG | - | chr5_4:18471084-18471103 | Msa0841800:intron | 5.0% |
| !! | ACATATATAAATTATATATA+AGG | + | chr5_4:18471508-18471527 | None:intergenic | 5.0% |
| !! | TTATATATGTATAAATAAAA+AGG | - | chr5_4:18471518-18471537 | Msa0841800:intron | 5.0% |
| CCGACACGATATTGATGGAG+TGG | + | chr5_4:18467140-18467159 | None:intergenic | 50.0% | |
| CGTTTGGGCAACCTAAAAGG+TGG | - | chr5_4:18468465-18468484 | Msa0841800:intron | 50.0% | |
| ! | GACCCACAATCCCACCTTTT+AGG | + | chr5_4:18468479-18468498 | None:intergenic | 50.0% |
| TGCCAAATGCTCTGATTGCG+TGG | - | chr5_4:18468549-18468568 | Msa0841800:intron | 50.0% | |
| GCCAAATGCTCTGATTGCGT+GGG | - | chr5_4:18468550-18468569 | Msa0841800:intron | 50.0% | |
| ! | TCCCACGCAATCAGAGCATT+TGG | + | chr5_4:18468554-18468573 | None:intergenic | 50.0% |
| AAGTGGACCAAAGGTGGTGA+AGG | - | chr5_4:18468946-18468965 | Msa0841800:intron | 50.0% | |
| AGTGGACCAAAGGTGGTGAA+GGG | - | chr5_4:18468947-18468966 | Msa0841800:intron | 50.0% | |
| TTGGAGCAGGAACATGATGG+TGG | + | chr5_4:18469012-18469031 | None:intergenic | 50.0% | |
| TGGTTGGAGCAGGAACATGA+TGG | + | chr5_4:18469015-18469034 | None:intergenic | 50.0% | |
| CTAACAGCAATGGTTGGAGC+AGG | + | chr5_4:18469025-18469044 | None:intergenic | 50.0% | |
| TAAGGGAGTTGTACCAGCTG+GGG | + | chr5_4:18469089-18469108 | None:intergenic | 50.0% | |
| GGAGCAATGGCAACACTTTC+TGG | - | chr5_4:18469601-18469620 | Msa0841800:intron | 50.0% | |
| ! | ACACTTTCTGGTGCCAAGAC+AGG | - | chr5_4:18469613-18469632 | Msa0841800:intron | 50.0% |
| TCTAGGAGAACGACCTGTCT+TGG | + | chr5_4:18469629-18469648 | None:intergenic | 50.0% | |
| TTCTCCTAGAGACAAGCGTG+TGG | - | chr5_4:18469639-18469658 | Msa0841800:intron | 50.0% | |
| GATTAGGCATGTCTAGGCGT+CGG | - | chr5_4:18469792-18469811 | Msa0841800:intron | 50.0% | |
| ACCATGCCTATGCTGTGCTA+AGG | - | chr5_4:18470616-18470635 | Msa0841800:intron | 50.0% | |
| GACATGCCTTAGCACAGCAT+AGG | + | chr5_4:18470625-18470644 | None:intergenic | 50.0% | |
| GACGATGACTATGTAACCGC+AGG | - | chr5_4:18471254-18471273 | Msa0841800:intron | 50.0% | |
| TGGTCGTTCACAAACACCTG+CGG | + | chr5_4:18471273-18471292 | None:intergenic | 50.0% | |
| TTCTCCAGCTCTTCAGGACT+GGG | + | chr5_4:18471629-18471648 | None:intergenic | 50.0% | |
| ATTCTCCAGCTCTTCAGGAC+TGG | + | chr5_4:18471630-18471649 | None:intergenic | 50.0% | |
| TACGCCGGGGAAATGAAGAA+AGG | - | chr5_4:18471782-18471801 | Msa0841800:intron | 50.0% | |
| GGTTCCAATATGGGCAAAGG+TGG | - | chr5_4:18471863-18471882 | Msa0841800:intron | 50.0% | |
| ATCGCCACCTTTGCCCATAT+TGG | + | chr5_4:18471870-18471889 | None:intergenic | 50.0% | |
| GGCGATGTTGCTCTCTTCTT+TGG | - | chr5_4:18471884-18471903 | Msa0841800:intron | 50.0% | |
| GCTCTCTTCTTTGGACTCTC+AGG | - | chr5_4:18471893-18471912 | Msa0841800:intron | 50.0% | |
| GGTGTCTCCAACATTGAAGG+TGG | - | chr5_4:18472174-18472193 | Msa0841800:intron | 50.0% | |
| GATATCAGGCTCTTTCTCCC+GGG | + | chr5_4:18472226-18472245 | None:intergenic | 50.0% | |
| GGGAGAAAGAGCCTGATATC+TGG | - | chr5_4:18472226-18472245 | Msa0841800:intron | 50.0% | |
| !! | AGGGTTAGCTTACTCACAGG+TGG | + | chr5_4:18473141-18473160 | None:intergenic | 50.0% |
| ACCTGTGAGTAAGCTAACCC+TGG | - | chr5_4:18473140-18473159 | Msa0841800:intron | 50.0% | |
| TATGTAGGTGGCTGGTACTG+AGG | - | chr5_4:18473281-18473300 | Msa0841800:intron | 50.0% | |
| GCTGAAAAGATGGAGAGCCA+TGG | - | chr5_4:18473393-18473412 | Msa0841800:intron | 50.0% | |
| TTCACAATGGAAGCCTCCTG+GGG | - | chr5_4:18473607-18473626 | Msa0841800:CDS | 50.0% | |
| TCTTCTTGTATTCTGCCCCC+AGG | + | chr5_4:18473626-18473645 | None:intergenic | 50.0% | |
| CTACTTCAGTTGGGGTCTGA+AGG | + | chr5_4:18473662-18473681 | None:intergenic | 50.0% | |
| TCAGACCCCAACTGAAGTAG+AGG | - | chr5_4:18473662-18473681 | Msa0841800:intron | 50.0% | |
| CAGACCCCAACTGAAGTAGA+GGG | - | chr5_4:18473663-18473682 | Msa0841800:intron | 50.0% | |
| GACACCCTCTACTTCAGTTG+GGG | + | chr5_4:18473670-18473689 | None:intergenic | 50.0% | |
| GGACACCCTCTACTTCAGTT+GGG | + | chr5_4:18473671-18473690 | None:intergenic | 50.0% | |
| GTTGTGTTGTGTGGAGGACT+AGG | - | chr5_4:18473958-18473977 | Msa0841800:intron | 50.0% | |
| GAGGACTAGGATTGTTAGGG+TGG | - | chr5_4:18473971-18473990 | Msa0841800:intron | 50.0% | |
| GCAACAGAGAACGGGAGCAA+CGG | - | chr5_4:18467403-18467422 | Msa0841800:CDS | 55.0% | |
| CAACAGAGAACGGGAGCAAC+GGG | - | chr5_4:18467404-18467423 | Msa0841800:CDS | 55.0% | |
| GGATCTCCCTTCACCACCTT+TGG | + | chr5_4:18468956-18468975 | None:intergenic | 55.0% | |
| AGATCCAGCCAAGAGCCAGA+AGG | - | chr5_4:18468970-18468989 | Msa0841800:intron | 55.0% | |
| !! | TCAACCTTCTGGCTCTTGGC+TGG | + | chr5_4:18468977-18468996 | None:intergenic | 55.0% |
| CTCTACAATCTCTCCCCAGC+TGG | - | chr5_4:18469073-18469092 | Msa0841800:intron | 55.0% | |
| GCCTTAGCACAGCATAGGCA+TGG | + | chr5_4:18470620-18470639 | None:intergenic | 55.0% | |
| ! | AGGGTGACTACAGGTTGAGG+TGG | - | chr5_4:18470919-18470938 | Msa0841800:intron | 55.0% |
| ATCCTCGGCACACAATACGC+CGG | - | chr5_4:18471767-18471786 | Msa0841800:intron | 55.0% | |
| !! | GCCAGGGTTAGCTTACTCAC+AGG | + | chr5_4:18473144-18473163 | None:intergenic | 55.0% |
| ATGGTACATGGTCTGCGCCA+GGG | + | chr5_4:18473160-18473179 | None:intergenic | 55.0% | |
| AATGGTACATGGTCTGCGCC+AGG | + | chr5_4:18473161-18473180 | None:intergenic | 55.0% | |
| ! | TAGGTGGCTGGTACTGAGGA+TGG | - | chr5_4:18473285-18473304 | Msa0841800:intron | 55.0% |
| ATGGAGAGCCATGGTGCAAC+AGG | - | chr5_4:18473402-18473421 | Msa0841800:intron | 55.0% | |
| AGAGCCATGGTGCAACAGGA+TGG | - | chr5_4:18473406-18473425 | Msa0841800:intron | 55.0% | |
| CAAGCCATCCTGTTGCACCA+TGG | + | chr5_4:18473413-18473432 | None:intergenic | 55.0% | |
| ! | GTTAACACTGGTTGGTCCGG+TGG | - | chr5_4:18473432-18473451 | Msa0841800:CDS | 55.0% |
| TCACAATGGAAGCCTCCTGG+GGG | - | chr5_4:18473608-18473627 | Msa0841800:CDS | 55.0% | |
| TCTTGTATTCTGCCCCCAGG+AGG | + | chr5_4:18473623-18473642 | None:intergenic | 55.0% | |
| GGGACACCCTCTACTTCAGT+TGG | + | chr5_4:18473672-18473691 | None:intergenic | 55.0% | |
| GCGACATTGTTGAAGCTGGG+TGG | - | chr5_4:18473824-18473843 | Msa0841800:intron | 55.0% | |
| CCAGCTCTTCAGGACTGGGT+CGG | + | chr5_4:18471625-18471644 | None:intergenic | 60.0% | |
| TCCTCGGCACACAATACGCC+GGG | - | chr5_4:18471768-18471787 | Msa0841800:intron | 60.0% | |
| ! | AGCGCATGGCTGGTTGGAAG+AGG | + | chr5_4:18471939-18471958 | None:intergenic | 60.0% |
| ! | GGAACATATCGGGGAGCGCA+TGG | + | chr5_4:18471953-18471972 | None:intergenic | 60.0% |
| CCGACCCAGTCCTGAAGAGC+TGG | - | chr5_4:18471622-18471641 | Msa0841800:intron | 65.0% | |
| CCTCGGCACACAATACGCCG+GGG | - | chr5_4:18471769-18471788 | Msa0841800:intron | 65.0% | |
| ! | CATATCGGGGAGCGCATGGC+TGG | + | chr5_4:18471949-18471968 | None:intergenic | 65.0% |
| ! | ACACTGGTTGGTCCGGTGGC+AGG | - | chr5_4:18473436-18473455 | Msa0841800:CDS | 65.0% |
| CCCCGGCGTATTGTGTGCCG+AGG | + | chr5_4:18471772-18471791 | None:intergenic | 70.0% | |
| ! | TCGGGGAGCGCATGGCTGGT+TGG | + | chr5_4:18471945-18471964 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 18466811 | 18474236 | 18466811 | ID=Msa0841800;Name=Msa0841800 |
| chr5_4 | mRNA | 18466811 | 18474236 | 18466811 | ID=Msa0841800-mRNA-1;Parent=Msa0841800;Name=Msa0841800-mRNA-1;_AED=0.14;_eAED=0.14;_QI=140|0.81|0.83|1|0.90|0.83|12|290|614 |
| chr5_4 | exon | 18466811 | 18467247 | 18466811 | ID=Msa0841800-mRNA-1:exon:7708;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18467328 | 18467496 | 18467328 | ID=Msa0841800-mRNA-1:exon:7707;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18467590 | 18467759 | 18467590 | ID=Msa0841800-mRNA-1:exon:7706;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18467844 | 18468007 | 18467844 | ID=Msa0841800-mRNA-1:exon:7705;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18468589 | 18468654 | 18468589 | ID=Msa0841800-mRNA-1:exon:7704;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18468777 | 18468950 | 18468777 | ID=Msa0841800-mRNA-1:exon:7703;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18469133 | 18469431 | 18469133 | ID=Msa0841800-mRNA-1:exon:7702;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18469671 | 18469771 | 18469671 | ID=Msa0841800-mRNA-1:exon:7701;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18471375 | 18471499 | 18471375 | ID=Msa0841800-mRNA-1:exon:7700;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18471953 | 18472128 | 18471953 | ID=Msa0841800-mRNA-1:exon:7699;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18473418 | 18473678 | 18473418 | ID=Msa0841800-mRNA-1:exon:7698;Parent=Msa0841800-mRNA-1 |
| chr5_4 | exon | 18474104 | 18474236 | 18474104 | ID=Msa0841800-mRNA-1:exon:7697;Parent=Msa0841800-mRNA-1 |
| chr5_4 | five_prime_UTR | 18474104 | 18474236 | 18474104 | ID=Msa0841800-mRNA-1:five_prime_utr;Parent=Msa0841800-mRNA-1 |
| chr5_4 | five_prime_UTR | 18473672 | 18473678 | 18473672 | ID=Msa0841800-mRNA-1:five_prime_utr;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18473418 | 18473671 | 18473418 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18471953 | 18472128 | 18471953 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18471375 | 18471499 | 18471375 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18469671 | 18469771 | 18469671 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18469133 | 18469431 | 18469133 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18468777 | 18468950 | 18468777 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18468589 | 18468654 | 18468589 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18467844 | 18468007 | 18467844 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18467590 | 18467759 | 18467590 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18467328 | 18467496 | 18467328 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | CDS | 18467101 | 18467247 | 18467101 | ID=Msa0841800-mRNA-1:cds;Parent=Msa0841800-mRNA-1 |
| chr5_4 | three_prime_UTR | 18466811 | 18467100 | 18466811 | ID=Msa0841800-mRNA-1:three_prime_utr;Parent=Msa0841800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
