Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761300 | G7L3K3 | 87.555 | 458 | 38 | 5 | 1 | 457 | 1 | 440 | 0.0 | 690 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0079380 | Msa0761300 | 0.804299 | 2.309510e-49 | -8.615850e-47 |
| Msa0084380 | Msa0761300 | 0.806846 | 6.746629e-50 | -8.615850e-47 |
| Msa0720730 | Msa0761300 | 0.854061 | 1.581615e-61 | -8.615850e-47 |
| Msa0761300 | Msa0841850 | 0.858611 | 7.316630e-63 | -8.615850e-47 |
| Msa0761300 | Msa0902510 | 0.807130 | 5.873723e-50 | -8.615850e-47 |
| Msa0761300 | Msa0974070 | 0.801016 | 1.098325e-48 | -8.615850e-47 |
| Msa0761300 | Msa1123380 | 0.821878 | 3.195156e-53 | -8.615850e-47 |
| Msa0761300 | Msa1193290 | 0.803734 | 3.026465e-49 | -8.615850e-47 |
| Msa0761300 | Msa1243490 | 0.820115 | 8.133495e-53 | -8.615850e-47 |
| Msa0761300 | Msa1276660 | 0.811255 | 7.671004e-51 | -8.615850e-47 |
| Msa0761300 | Msa1333480 | 0.803837 | 2.880637e-49 | -8.615850e-47 |
| Msa0761300 | Msa1440310 | 0.802856 | 4.599008e-49 | -8.615850e-47 |
| Msa0761300 | Msa1451160 | 0.818073 | 2.370755e-52 | -8.615850e-47 |
| Msa0761300 | Msa1466540 | 0.812790 | 3.550475e-51 | -8.615850e-47 |
| Msa0264150 | Msa0761300 | 0.808610 | 2.846052e-50 | -8.615850e-47 |
| Msa0358890 | Msa0761300 | 0.802442 | 5.599824e-49 | -8.615850e-47 |
| Msa0504210 | Msa0761300 | 0.819994 | 8.671028e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761300 | MtrunA17_Chr7g0247241 | 87.555 | 458 | 38 | 5 | 1 | 457 | 1 | 440 | 0.0 | 690 |
| Msa0761300 | MtrunA17_Chr5g0411521 | 82.213 | 461 | 48 | 6 | 1 | 457 | 46 | 476 | 0.0 | 675 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761300 | AT3G53440.2 | 40.136 | 294 | 139 | 7 | 160 | 446 | 249 | 512 | 4.54e-47 | 170 |
| Msa0761300 | AT3G53440.1 | 40.136 | 294 | 139 | 7 | 160 | 446 | 249 | 512 | 4.54e-47 | 170 |
Find 112 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTCAATCAATTAAGATTT+AGG | 0.116714 | 5_2:+18482980 | Msa0761300:CDS |
| CGGAACTTGATCGCTCAAAT+TGG | 0.204301 | 5_2:-18480082 | None:intergenic |
| CAAAACCTAGTCCTCATTTC+TGG | 0.236228 | 5_2:+18480481 | Msa0761300:CDS |
| GAGATTGAAGGTGGAGTAGA+AGG | 0.245379 | 5_2:+18480300 | Msa0761300:CDS |
| TCCAAACTTCTATTGTAATA+TGG | 0.246282 | 5_2:+18483405 | Msa0761300:three_prime_UTR |
| TTTGTTGTAGATTTGGGTTT+TGG | 0.250049 | 5_2:-18480009 | None:intergenic |
| CTGGAAGAACGTTTCTAAAC+TGG | 0.295900 | 5_2:+18480500 | Msa0761300:CDS |
| TGTCAATCAATTAAGATTTA+GGG | 0.297311 | 5_2:+18482981 | Msa0761300:CDS |
| TTCTGAGTAACAATGCTCTT+TGG | 0.320344 | 5_2:-18482655 | None:intergenic |
| TGTCGCCCATGAAATTGATT+TGG | 0.322977 | 5_2:-18483149 | None:intergenic |
| GCCATATTACAATAGAAGTT+TGG | 0.323126 | 5_2:-18483406 | None:intergenic |
| AAGTCTCTTTCTAGATTTAG+TGG | 0.343248 | 5_2:+18482883 | Msa0761300:CDS |
| ATCTTTCATTGCAAATTTGT+AGG | 0.343532 | 5_2:-18482837 | None:intergenic |
| CAGATGTAATGCATTTAGAT+TGG | 0.350919 | 5_2:+18483442 | Msa0761300:three_prime_UTR |
| GATGTTAAAGTGAGTGAATT+TGG | 0.353800 | 5_2:+18480141 | Msa0761300:CDS |
| GCAATCCCAAATCAATTTCA+TGG | 0.362655 | 5_2:+18483143 | Msa0761300:CDS |
| GTCGCCCATGAAATTGATTT+GGG | 0.364937 | 5_2:-18483148 | None:intergenic |
| AAAGTTGATCAAAATCATAA+AGG | 0.382393 | 5_2:+18482709 | Msa0761300:CDS |
| CAAAATCTGTTGCAGGTACC+TGG | 0.382661 | 5_2:+18482454 | Msa0761300:intron |
| TCTAGATTTAGTGGCTCATC+AGG | 0.392797 | 5_2:+18482892 | Msa0761300:CDS |
| AAGTTGATCAAAATCATAAA+GGG | 0.398649 | 5_2:+18482710 | Msa0761300:CDS |
| GGTGATCTTCGTGGGGTGCC+AGG | 0.414139 | 5_2:-18479943 | None:intergenic |
| AATTAAGATTTAGGGACCTT+AGG | 0.417162 | 5_2:+18482989 | Msa0761300:CDS |
| ACGACAGTGGGGTTTCTGTT+TGG | 0.423200 | 5_2:-18479913 | None:intergenic |
| TGGTTGAAGGTGGTAGAAAA+AGG | 0.424066 | 5_2:+18480229 | Msa0761300:CDS |
| GAAAAGAGAAGAAAAGTAGC+GGG | 0.430036 | 5_2:+18480199 | Msa0761300:CDS |
| AGATGTAATGCATTTAGATT+GGG | 0.430672 | 5_2:+18483443 | Msa0761300:three_prime_UTR |
| TATCAAGATCCAAAACCGTT+AGG | 0.434211 | 5_2:+18480046 | Msa0761300:CDS |
| GTGGGTATGAGCAGTTTACT+TGG | 0.440203 | 5_2:-18482598 | None:intergenic |
| GGAGAAGAGCAGCATCTTCA+AGG | 0.442712 | 5_2:+18483010 | Msa0761300:CDS |
| CTCAATGTCAACCTCGATCA+AGG | 0.450308 | 5_2:+18482530 | Msa0761300:CDS |
| GGAACTTGATCGCTCAAATT+GGG | 0.454245 | 5_2:-18480081 | None:intergenic |
| GTGGACTAAGGAACAAGAAT+TGG | 0.455229 | 5_2:+18480434 | Msa0761300:CDS |
| AAGCAACAAAAGGAAAATCA+AGG | 0.462563 | 5_2:+18482811 | Msa0761300:CDS |
| AAGGTGGAGTAGAAGGGAAA+AGG | 0.464211 | 5_2:+18480307 | Msa0761300:CDS |
| GAAACGTTCTTCCAGAAATG+AGG | 0.470466 | 5_2:-18480492 | None:intergenic |
| CCCACTGTCGTTTACCCACC+TGG | 0.474091 | 5_2:+18479925 | Msa0761300:CDS |
| TGAGTCTCGGTGATCTTCGT+GGG | 0.486579 | 5_2:-18479951 | None:intergenic |
| ATCAAGATCCAAAACCGTTA+GGG | 0.491826 | 5_2:+18480047 | Msa0761300:CDS |
| CGATGGTGGTGGTGAAATAG+TGG | 0.493539 | 5_2:+18480335 | Msa0761300:CDS |
| GAGATATTGAGAATTGATGA+AGG | 0.499568 | 5_2:-18482576 | None:intergenic |
| AAGATGCTGCTCTTCTCCTA+AGG | 0.500545 | 5_2:-18483005 | None:intergenic |
| ATGAGTCTCGGTGATCTTCG+TGG | 0.500562 | 5_2:-18479952 | None:intergenic |
| ATCTTCGTGGGGTGCCAGGT+GGG | 0.501330 | 5_2:-18479939 | None:intergenic |
| TAAAGCAGCAAAAGTTGCAT+TGG | 0.501844 | 5_2:+18483086 | Msa0761300:CDS |
| AGAAGAAAGCACGGTGGTGA+TGG | 0.502654 | 5_2:+18480252 | Msa0761300:CDS |
| TTGTACTCCAAAGCAACAAA+AGG | 0.506093 | 5_2:+18482801 | Msa0761300:CDS |
| TTGCCAACCTTCTTTCCAGT+GGG | 0.512778 | 5_2:-18482616 | None:intergenic |
| GCTCATACCCACTGGAAAGA+AGG | 0.513723 | 5_2:+18482609 | Msa0761300:CDS |
| CAATCTTGTTTAGACTTCCC+AGG | 0.515115 | 5_2:-18482472 | None:intergenic |
| GATCTTCGTGGGGTGCCAGG+TGG | 0.516975 | 5_2:-18479940 | None:intergenic |
| CCAGGTGGGTAAACGACAGT+GGG | 0.518221 | 5_2:-18479925 | None:intergenic |
| TTTACTTGCTTTAGCACAGG+TGG | 0.520137 | 5_2:-18482934 | None:intergenic |
| AGGAAGAGAAAGCGCGGTGG+TGG | 0.525493 | 5_2:+18480396 | Msa0761300:CDS |
| AAGAAAGAAGAGATTGAAGG+TGG | 0.529397 | 5_2:+18480291 | Msa0761300:CDS |
| AATAGTGGAAGAGTTGAGGA+AGG | 0.535399 | 5_2:+18480350 | Msa0761300:CDS |
| TTTGCCAACCTTCTTTCCAG+TGG | 0.543425 | 5_2:-18482617 | None:intergenic |
| GGAAAAGAGAAGAAAAGTAG+CGG | 0.543653 | 5_2:+18480198 | Msa0761300:CDS |
| AGGAAGAAAGAAGAGATTGA+AGG | 0.543684 | 5_2:+18480288 | Msa0761300:CDS |
| TAATTGTCTTGTATCCGTCT+AGG | 0.544557 | 5_2:+18483487 | Msa0761300:three_prime_UTR |
| TCTGTAGCTGGAGAAGGAAA+AGG | 0.546804 | 5_2:+18483042 | Msa0761300:CDS |
| GTGAAATAGTGGAAGAGTTG+AGG | 0.549461 | 5_2:+18480346 | Msa0761300:CDS |
| CTTGATCGAGGTTGACATTG+AGG | 0.550062 | 5_2:-18482529 | None:intergenic |
| AGATTGAAGGTGGAGTAGAA+GGG | 0.553424 | 5_2:+18480301 | Msa0761300:CDS |
| AAAAGAGAAGAAAAGTAGCG+GGG | 0.557669 | 5_2:+18480200 | Msa0761300:CDS |
| ATCAAGTTCCGTCGCTTAGA+CGG | 0.558259 | 5_2:+18480094 | Msa0761300:CDS |
| GCACGGTGGTGATGGAATTG+AGG | 0.558489 | 5_2:+18480260 | Msa0761300:CDS |
| TTCTTCCAGAAATGAGGACT+AGG | 0.561243 | 5_2:-18480486 | None:intergenic |
| CAATCCCAAATCAATTTCAT+GGG | 0.561849 | 5_2:+18483144 | Msa0761300:CDS |
| AAGTTGAATGTGGTGTGAAA+AGG | 0.575392 | 5_2:+18480376 | Msa0761300:CDS |
| GTGATGGAATTGAGGAAGGG+AGG | 0.575565 | 5_2:+18480268 | Msa0761300:CDS |
| GGTGGTGATGGAATTGAGGA+AGG | 0.582281 | 5_2:+18480264 | Msa0761300:CDS |
| GCCAGGTGGGTAAACGACAG+TGG | 0.583014 | 5_2:-18479926 | None:intergenic |
| ATACCCACTGGAAAGAAGGT+TGG | 0.583152 | 5_2:+18482613 | Msa0761300:CDS |
| ATTGCCTTTGCCCTTGATCG+AGG | 0.585103 | 5_2:-18482541 | None:intergenic |
| GGAGTACAAAGTTCTTGACT+AGG | 0.585184 | 5_2:-18482787 | None:intergenic |
| AAAGAGAAGAAAAGTAGCGG+GGG | 0.585434 | 5_2:+18480201 | Msa0761300:CDS |
| AGTTGCACAAGGGTGGACTA+AGG | 0.587210 | 5_2:+18480422 | Msa0761300:CDS |
| AAAATCTGTTGCAGGTACCT+GGG | 0.591061 | 5_2:+18482455 | Msa0761300:intron |
| AGTAAACTGCTCATACCCAC+TGG | 0.591066 | 5_2:+18482601 | Msa0761300:CDS |
| AAATATACAAAGATCACAGT+AGG | 0.592908 | 5_2:+18483521 | Msa0761300:three_prime_UTR |
| ATTAGCTCGAGAAAAGCCTA+TGG | 0.593019 | 5_2:-18483225 | None:intergenic |
| GAGAAGAGCAGCATCTTCAA+GGG | 0.593581 | 5_2:+18483011 | Msa0761300:CDS |
| AGATATTGAGAATTGATGAA+GGG | 0.597555 | 5_2:-18482575 | None:intergenic |
| TAGATTGGGCTATAGAGCAA+TGG | 0.601812 | 5_2:+18483457 | Msa0761300:three_prime_UTR |
| TCAATGTCAACCTCGATCAA+GGG | 0.603959 | 5_2:+18482531 | Msa0761300:CDS |
| AAAAGGAAACACGATGGTGG+TGG | 0.607985 | 5_2:+18480324 | Msa0761300:CDS |
| TCAACCTCGATCAAGGGCAA+AGG | 0.616379 | 5_2:+18482537 | Msa0761300:CDS |
| AGCAACAAAAGGAAAATCAA+GGG | 0.616741 | 5_2:+18482812 | Msa0761300:CDS |
| GATATTGAGAATTGATGAAG+GGG | 0.627652 | 5_2:-18482574 | None:intergenic |
| TCATGGAGGAGGATGAGTCT+CGG | 0.628860 | 5_2:-18479964 | None:intergenic |
| GAGGACAATGACGATGACAC+TGG | 0.629852 | 5_2:+18483186 | Msa0761300:CDS |
| TTTCAAGCTAAGTACCTAGA+CGG | 0.630475 | 5_2:-18483501 | None:intergenic |
| GGTGGTGGTGAAGTTGCACA+AGG | 0.634091 | 5_2:+18480411 | Msa0761300:CDS |
| CGACACTTGTAGTTCTGATG+AGG | 0.643806 | 5_2:+18483167 | Msa0761300:CDS |
| AGCTGAAGATGAAACTCCAT+AGG | 0.645407 | 5_2:+18483209 | Msa0761300:CDS |
| CTAGGAGACCGTCTAAGCGA+CGG | 0.647438 | 5_2:-18480102 | None:intergenic |
| AGTTGATCAAAATCATAAAG+GGG | 0.648404 | 5_2:+18482711 | Msa0761300:CDS |
| GTGGTGAAGTTGCACAAGGG+TGG | 0.656463 | 5_2:+18480415 | Msa0761300:CDS |
| GTTGACATTGAGGTGGTGTG+TGG | 0.659104 | 5_2:-18482519 | None:intergenic |
| GAGGTGGTGTGTGGAAGTCG+TGG | 0.661838 | 5_2:-18482510 | None:intergenic |
| GTGGTGATGGAATTGAGGAA+GGG | 0.666606 | 5_2:+18480265 | Msa0761300:CDS |
| AGGAAGGAAGAAGTTGAATG+TGG | 0.671131 | 5_2:+18480366 | Msa0761300:CDS |
| GATCGAGGTTGACATTGAGG+TGG | 0.674874 | 5_2:-18482526 | None:intergenic |
| GGGAAAAGGAAACACGATGG+TGG | 0.677817 | 5_2:+18480321 | Msa0761300:CDS |
| GAGTCTCGGTGATCTTCGTG+GGG | 0.678324 | 5_2:-18479950 | None:intergenic |
| GTGGTGGTGAAGTTGCACAA+GGG | 0.698386 | 5_2:+18480412 | Msa0761300:CDS |
| GTGAAAAGGAAGAGAAAGCG+CGG | 0.698757 | 5_2:+18480390 | Msa0761300:CDS |
| AAAAGGAAGAGAAAGCGCGG+TGG | 0.749477 | 5_2:+18480393 | Msa0761300:CDS |
| GAAGGGAAAAGGAAACACGA+TGG | 0.761328 | 5_2:+18480318 | Msa0761300:CDS |
| CAGGTGGGTAAACGACAGTG+GGG | 0.763697 | 5_2:-18479924 | None:intergenic |
| AAAAGGAGAAGAAAGCACGG+TGG | 0.843786 | 5_2:+18480246 | Msa0761300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGAAAAATTATAGATTAA+TGG | + | chr5_2:18480651-18480670 | Msa0761300:intron | 10.0% |
| !! | TAGAAAAATTATAGATTAAT+GGG | + | chr5_2:18480652-18480671 | Msa0761300:intron | 10.0% |
| !! | ATAAAATTATAATTTCTTGA+TGG | + | chr5_2:18482371-18482390 | Msa0761300:intron | 10.0% |
| !!! | TTAGAAGAATAATTGATTTT+AGG | + | chr5_2:18480563-18480582 | Msa0761300:intron | 15.0% |
| !!! | AAAATTATAGATTAATGGGT+TGG | + | chr5_2:18480656-18480675 | Msa0761300:intron | 20.0% |
| !! | AATTATAGTGTTTAATCCAA+TGG | + | chr5_2:18481246-18481265 | Msa0761300:intron | 20.0% |
| !!! | CAACTACAAATATTTTTTCA+TGG | - | chr5_2:18481345-18481364 | None:intergenic | 20.0% |
| !!! | TTTTCTCATATAGTTTTTCT+AGG | - | chr5_2:18481455-18481474 | None:intergenic | 20.0% |
| !! | AATATATAACAGATCGTTTA+TGG | + | chr5_2:18481517-18481536 | Msa0761300:intron | 20.0% |
| !! | TTTAAAGAACAACAAAACAA+AGG | - | chr5_2:18481857-18481876 | None:intergenic | 20.0% |
| !!! | TTAATCCAATAGTTTTATAG+AGG | + | chr5_2:18481971-18481990 | Msa0761300:intron | 20.0% |
| !! | TATATTTAACAGTTACCTTT+AGG | - | chr5_2:18482096-18482115 | None:intergenic | 20.0% |
| !!! | ATAGAATCACTTTTACTTTT+CGG | + | chr5_2:18482300-18482319 | Msa0761300:intron | 20.0% |
| !!! | TATTACATTTTTCTTTGTGA+TGG | - | chr5_2:18482354-18482373 | None:intergenic | 20.0% |
| !!! | AAAGTTGATCAAAATCATAA+AGG | + | chr5_2:18482709-18482728 | Msa0761300:CDS | 20.0% |
| !!! | AAGTTGATCAAAATCATAAA+GGG | + | chr5_2:18482710-18482729 | Msa0761300:CDS | 20.0% |
| !! | TTAGTAGAAAAATCAAAGTT+GGG | - | chr5_2:18482757-18482776 | None:intergenic | 20.0% |
| !! | ATTAGTAGAAAAATCAAAGT+TGG | - | chr5_2:18482758-18482777 | None:intergenic | 20.0% |
| !! | ATGTCAATCAATTAAGATTT+AGG | + | chr5_2:18482980-18482999 | Msa0761300:CDS | 20.0% |
| !! | TGTCAATCAATTAAGATTTA+GGG | + | chr5_2:18482981-18483000 | Msa0761300:CDS | 20.0% |
| !!! | TTTAAAGTTTTAGACATTGT+AGG | + | chr5_2:18483286-18483305 | Msa0761300:three_prime_UTR | 20.0% |
| !!! | GATGATTTTGTTGTAGATTT+GGG | - | chr5_2:18480018-18480037 | None:intergenic | 25.0% |
| !!! | AGATGATTTTGTTGTAGATT+TGG | - | chr5_2:18480019-18480038 | None:intergenic | 25.0% |
| !!! | CACTTTAACATCATTTTTCT+TGG | - | chr5_2:18480133-18480152 | None:intergenic | 25.0% |
| ! | TCTTAAATACAGAGAAAGAT+AGG | - | chr5_2:18480531-18480550 | None:intergenic | 25.0% |
| ! | TGATACGTGACATAATATTA+TGG | + | chr5_2:18480688-18480707 | Msa0761300:intron | 25.0% |
| !! | TTCAGTAAGCTAAATTTGTT+TGG | + | chr5_2:18480785-18480804 | Msa0761300:intron | 25.0% |
| !! | CTACTAACTAGTTTAAATCT+AGG | - | chr5_2:18480883-18480902 | None:intergenic | 25.0% |
| !! | ATTGTGAGATTTGAAATTTC+TGG | + | chr5_2:18480980-18480999 | Msa0761300:intron | 25.0% |
| !! | TTGTGAGATTTGAAATTTCT+GGG | + | chr5_2:18480981-18481000 | Msa0761300:intron | 25.0% |
| !! | AGTGATTAATTTTGAGCAAA+TGG | - | chr5_2:18481014-18481033 | None:intergenic | 25.0% |
| ! | GAAAAACAACAACAAAACAA+AGG | - | chr5_2:18481077-18481096 | None:intergenic | 25.0% |
| !!! | TAATCCAATGGTTTTATAGA+AGG | + | chr5_2:18481258-18481277 | Msa0761300:intron | 25.0% |
| ! | ATTACTTGTCCAAATTAATG+AGG | + | chr5_2:18481425-18481444 | Msa0761300:intron | 25.0% |
| ! | TATCAAACTCATTAATCACT+AGG | - | chr5_2:18481490-18481509 | None:intergenic | 25.0% |
| ! | TCTATGTGTTTATTTCCTAA+AGG | + | chr5_2:18482078-18482097 | Msa0761300:intron | 25.0% |
| ! | CTTTCATGTTTATCGAATAT+CGG | + | chr5_2:18482127-18482146 | Msa0761300:intron | 25.0% |
| ! | ATTTCATAAAGATGTCTGAA+TGG | - | chr5_2:18482279-18482298 | None:intergenic | 25.0% |
| ! | AGATATTGAGAATTGATGAA+GGG | - | chr5_2:18482578-18482597 | None:intergenic | 25.0% |
| !!! | GATTTTGATCAACTTTAAGA+TGG | - | chr5_2:18482705-18482724 | None:intergenic | 25.0% |
| ! | AGTTGATCAAAATCATAAAG+GGG | + | chr5_2:18482711-18482730 | Msa0761300:CDS | 25.0% |
| ! | ATCTTTCATTGCAAATTTGT+AGG | - | chr5_2:18482840-18482859 | None:intergenic | 25.0% |
| ! | TCCAAACTTCTATTGTAATA+TGG | + | chr5_2:18483405-18483424 | Msa0761300:three_prime_UTR | 25.0% |
| ! | AGATGTAATGCATTTAGATT+GGG | + | chr5_2:18483443-18483462 | Msa0761300:three_prime_UTR | 25.0% |
| ! | AAATATACAAAGATCACAGT+AGG | + | chr5_2:18483521-18483540 | Msa0761300:three_prime_UTR | 25.0% |
| !! | TTGTTGTAGATTTGGGTTTT+GGG | - | chr5_2:18480011-18480030 | None:intergenic | 30.0% |
| !! | TTTGTTGTAGATTTGGGTTT+TGG | - | chr5_2:18480012-18480031 | None:intergenic | 30.0% |
| !! | TCATTTTTCTTGGAGAATCT+AGG | - | chr5_2:18480123-18480142 | None:intergenic | 30.0% |
| GATGTTAAAGTGAGTGAATT+TGG | + | chr5_2:18480141-18480160 | Msa0761300:CDS | 30.0% | |
| TTGAATTATGTGTCTAAACG+AGG | + | chr5_2:18480623-18480642 | Msa0761300:intron | 30.0% | |
| ACTAAATACTGTCTACTACA+TGG | - | chr5_2:18480725-18480744 | None:intergenic | 30.0% | |
| AGACAGTATTTAGTGTGATA+AGG | + | chr5_2:18480731-18480750 | Msa0761300:intron | 30.0% | |
| GTATTTAGTGTGATAAGGTT+TGG | + | chr5_2:18480736-18480755 | Msa0761300:intron | 30.0% | |
| CAACACTATTAGTAAATAGC+TGG | + | chr5_2:18480848-18480867 | Msa0761300:intron | 30.0% | |
| !!! | ATGACGATTTTGGTTTATCA+CGG | + | chr5_2:18481039-18481058 | Msa0761300:intron | 30.0% |
| AATGCCTTCTATAAAACCAT+TGG | - | chr5_2:18481265-18481284 | None:intergenic | 30.0% | |
| !! | AGCAACAACCAAGTTTTATA+GGG | - | chr5_2:18481566-18481585 | None:intergenic | 30.0% |
| ! | CTCAGTAAGCTAAATTTGTT+CGG | + | chr5_2:18481605-18481624 | Msa0761300:intron | 30.0% |
| GAAGTTTCAAATCTCACAAT+TGG | - | chr5_2:18481761-18481780 | None:intergenic | 30.0% | |
| ! | ATTGTGAGATTTGAAACTTC+TGG | + | chr5_2:18481761-18481780 | Msa0761300:intron | 30.0% |
| ! | TTGTGAGATTTGAAACTTCT+GGG | + | chr5_2:18481762-18481781 | Msa0761300:intron | 30.0% |
| ! | CAAAACAAAGGCATAAGATA+AGG | - | chr5_2:18481845-18481864 | None:intergenic | 30.0% |
| TTTCAATAACAACACCATGT+TGG | - | chr5_2:18482055-18482074 | None:intergenic | 30.0% | |
| !!! | TGTTTATCGAATATCGGTTT+TGG | + | chr5_2:18482133-18482152 | Msa0761300:intron | 30.0% |
| TGAGCATTTGAATTATTCTG+TGG | + | chr5_2:18482212-18482231 | Msa0761300:intron | 30.0% | |
| TAAGCACATATGCACTTATA+TGG | - | chr5_2:18482408-18482427 | None:intergenic | 30.0% | |
| GATATTGAGAATTGATGAAG+GGG | - | chr5_2:18482577-18482596 | None:intergenic | 30.0% | |
| GAGATATTGAGAATTGATGA+AGG | - | chr5_2:18482579-18482598 | None:intergenic | 30.0% | |
| !! | TGATTTTCCTTTTGTTGCTT+TGG | - | chr5_2:18482811-18482830 | None:intergenic | 30.0% |
| AAGCAACAAAAGGAAAATCA+AGG | + | chr5_2:18482811-18482830 | Msa0761300:CDS | 30.0% | |
| AGCAACAAAAGGAAAATCAA+GGG | + | chr5_2:18482812-18482831 | Msa0761300:CDS | 30.0% | |
| AAGTCTCTTTCTAGATTTAG+TGG | + | chr5_2:18482883-18482902 | Msa0761300:CDS | 30.0% | |
| !!! | TTTTTTACTTGCTTTAGCAC+AGG | - | chr5_2:18482940-18482959 | None:intergenic | 30.0% |
| GCTAAAGCAAGTAAAAAACA+AGG | + | chr5_2:18482942-18482961 | Msa0761300:CDS | 30.0% | |
| AATTAAGATTTAGGGACCTT+AGG | + | chr5_2:18482989-18483008 | Msa0761300:CDS | 30.0% | |
| CAATCCCAAATCAATTTCAT+GGG | + | chr5_2:18483144-18483163 | Msa0761300:CDS | 30.0% | |
| GCCATATTACAATAGAAGTT+TGG | - | chr5_2:18483409-18483428 | None:intergenic | 30.0% | |
| CAGATGTAATGCATTTAGAT+TGG | + | chr5_2:18483442-18483461 | Msa0761300:three_prime_UTR | 30.0% | |
| !! | TGTTGTAGATTTGGGTTTTG+GGG | - | chr5_2:18480010-18480029 | None:intergenic | 35.0% |
| !!! | AACGGTTTTGGATCTTGATA+TGG | - | chr5_2:18480046-18480065 | None:intergenic | 35.0% |
| TATCAAGATCCAAAACCGTT+AGG | + | chr5_2:18480046-18480065 | Msa0761300:CDS | 35.0% | |
| ATCAAGATCCAAAACCGTTA+GGG | + | chr5_2:18480047-18480066 | Msa0761300:CDS | 35.0% | |
| ! | TTTTCTTACCCTAACGGTTT+TGG | - | chr5_2:18480058-18480077 | None:intergenic | 35.0% |
| ! | TGTTTTTCTCATCGAATCAC+AGG | - | chr5_2:18480169-18480188 | None:intergenic | 35.0% |
| TGTGATTCGATGAGAAAAAC+AGG | + | chr5_2:18480168-18480187 | Msa0761300:CDS | 35.0% | |
| GGAAAAGAGAAGAAAAGTAG+CGG | + | chr5_2:18480198-18480217 | Msa0761300:CDS | 35.0% | |
| GAAAAGAGAAGAAAAGTAGC+GGG | + | chr5_2:18480199-18480218 | Msa0761300:CDS | 35.0% | |
| AAAAGAGAAGAAAAGTAGCG+GGG | + | chr5_2:18480200-18480219 | Msa0761300:CDS | 35.0% | |
| AGAAAAAGGAGAAGAAAGCA+CGG | + | chr5_2:18480243-18480262 | Msa0761300:CDS | 35.0% | |
| AGGAAGAAAGAAGAGATTGA+AGG | + | chr5_2:18480288-18480307 | Msa0761300:CDS | 35.0% | |
| AAGAAAGAAGAGATTGAAGG+TGG | + | chr5_2:18480291-18480310 | Msa0761300:CDS | 35.0% | |
| AAGTTGAATGTGGTGTGAAA+AGG | + | chr5_2:18480376-18480395 | Msa0761300:CDS | 35.0% | |
| AAATTCGTCAAGTATCAGCA+AGG | + | chr5_2:18480823-18480842 | Msa0761300:intron | 35.0% | |
| AGTAGTGTGTATGTCTAGAA+AGG | + | chr5_2:18480898-18480917 | Msa0761300:intron | 35.0% | |
| ! | TCACTCAAAGATGACGATTT+TGG | + | chr5_2:18481029-18481048 | Msa0761300:intron | 35.0% |
| ! | CAAAACAAAGGCGTAAGATA+AGG | - | chr5_2:18481065-18481084 | None:intergenic | 35.0% |
| !! | TTTATAGAAGGCATTGCATC+AGG | + | chr5_2:18481270-18481289 | Msa0761300:intron | 35.0% |
| !! | TTATAGAAGGCATTGCATCA+GGG | + | chr5_2:18481271-18481290 | Msa0761300:intron | 35.0% |
| ATAGGTAGACACATACATTG+CGG | + | chr5_2:18481299-18481318 | Msa0761300:intron | 35.0% | |
| CTAGGTCTTCCTCATTAATT+TGG | - | chr5_2:18481437-18481456 | None:intergenic | 35.0% | |
| GTAGTTGACCCTATAAAACT+TGG | + | chr5_2:18481555-18481574 | Msa0761300:intron | 35.0% | |
| !! | CAGCAACAACCAAGTTTTAT+AGG | - | chr5_2:18481567-18481586 | None:intergenic | 35.0% |
| ! | CGAACAAATTTAGCTTACTG+AGG | - | chr5_2:18481607-18481626 | None:intergenic | 35.0% |
| CAACACAATTGGTAAATAGC+TGG | + | chr5_2:18481661-18481680 | Msa0761300:intron | 35.0% | |
| ACTAGTTAGCGTGTATAGAA+AGG | + | chr5_2:18481704-18481723 | Msa0761300:intron | 35.0% | |
| TCGTCTTTGAGTGAATCTTT+CGG | - | chr5_2:18481803-18481822 | None:intergenic | 35.0% | |
| TCACTCAAAGACGATAAGTT+TGG | + | chr5_2:18481809-18481828 | Msa0761300:intron | 35.0% | |
| TGCAGCCTCTATAAAACTAT+TGG | - | chr5_2:18481979-18481998 | None:intergenic | 35.0% | |
| TAACAACACCATGTTGGAAA+CGG | - | chr5_2:18482049-18482068 | None:intergenic | 35.0% | |
| TTGTACAGCAATTTCATGAC+CGG | - | chr5_2:18482437-18482456 | None:intergenic | 35.0% | |
| TTCTGAGTAACAATGCTCTT+TGG | - | chr5_2:18482658-18482677 | None:intergenic | 35.0% | |
| TTGTACTCCAAAGCAACAAA+AGG | + | chr5_2:18482801-18482820 | Msa0761300:CDS | 35.0% | |
| AAAAAATCTGTAGCTGGAGA+AGG | + | chr5_2:18483036-18483055 | Msa0761300:CDS | 35.0% | |
| TAAAGCAGCAAAAGTTGCAT+TGG | + | chr5_2:18483086-18483105 | Msa0761300:CDS | 35.0% | |
| GCAATCCCAAATCAATTTCA+TGG | + | chr5_2:18483143-18483162 | Msa0761300:CDS | 35.0% | |
| TAATTGTCTTGTATCCGTCT+AGG | + | chr5_2:18483487-18483506 | Msa0761300:three_prime_UTR | 35.0% | |
| TTTCAAGCTAAGTACCTAGA+CGG | - | chr5_2:18483504-18483523 | None:intergenic | 35.0% | |
| !!! | TGTTGTTGTTTTCATGGAGG+AGG | - | chr5_2:18479978-18479997 | None:intergenic | 40.0% |
| !!! | GGTTGTTGTTGTTTTCATGG+AGG | - | chr5_2:18479981-18480000 | None:intergenic | 40.0% |
| !!! | TGGGGTTGTTGTTGTTTTCA+TGG | - | chr5_2:18479984-18480003 | None:intergenic | 40.0% |
| ! | GGGTGATTTTCTTACCCTAA+CGG | - | chr5_2:18480064-18480083 | None:intergenic | 40.0% |
| GGAACTTGATCGCTCAAATT+GGG | - | chr5_2:18480084-18480103 | None:intergenic | 40.0% | |
| ATGAGAAAAACAGGTCGTGA+AGG | + | chr5_2:18480177-18480196 | Msa0761300:CDS | 40.0% | |
| AAAGAGAAGAAAAGTAGCGG+GGG | + | chr5_2:18480201-18480220 | Msa0761300:CDS | 40.0% | |
| TGGTTGAAGGTGGTAGAAAA+AGG | + | chr5_2:18480229-18480248 | Msa0761300:CDS | 40.0% | |
| AGATTGAAGGTGGAGTAGAA+GGG | + | chr5_2:18480301-18480320 | Msa0761300:CDS | 40.0% | |
| ! | GTGAAATAGTGGAAGAGTTG+AGG | + | chr5_2:18480346-18480365 | Msa0761300:CDS | 40.0% |
| ! | AATAGTGGAAGAGTTGAGGA+AGG | + | chr5_2:18480350-18480369 | Msa0761300:CDS | 40.0% |
| AGGAAGGAAGAAGTTGAATG+TGG | + | chr5_2:18480366-18480385 | Msa0761300:CDS | 40.0% | |
| ! | GTGGACTAAGGAACAAGAAT+TGG | + | chr5_2:18480434-18480453 | Msa0761300:CDS | 40.0% |
| CAAAACCTAGTCCTCATTTC+TGG | + | chr5_2:18480481-18480500 | Msa0761300:CDS | 40.0% | |
| TTCTTCCAGAAATGAGGACT+AGG | - | chr5_2:18480489-18480508 | None:intergenic | 40.0% | |
| GAAACGTTCTTCCAGAAATG+AGG | - | chr5_2:18480495-18480514 | None:intergenic | 40.0% | |
| CTGGAAGAACGTTTCTAAAC+TGG | + | chr5_2:18480500-18480519 | Msa0761300:CDS | 40.0% | |
| ATGTCTAGAAAGGTCTTCTC+AGG | + | chr5_2:18480908-18480927 | Msa0761300:intron | 40.0% | |
| ACTAATCTGCGCTGAGATTA+AGG | - | chr5_2:18480955-18480974 | None:intergenic | 40.0% | |
| GCTGCACACAAAGATAAAGA+AGG | + | chr5_2:18481158-18481177 | Msa0761300:intron | 40.0% | |
| !! | ATAAAGAAGGCATTGCAGCA+TGG | + | chr5_2:18481171-18481190 | Msa0761300:intron | 40.0% |
| CATACTATGAAACCCGTCAA+GGG | + | chr5_2:18481628-18481647 | Msa0761300:intron | 40.0% | |
| GCAGCAAAGTTCAACACAAT+TGG | + | chr5_2:18481650-18481669 | Msa0761300:intron | 40.0% | |
| ! | ACGCTAACTAGTTTGAACCT+AGG | - | chr5_2:18481696-18481715 | None:intergenic | 40.0% |
| CGTCTTTGAGTGAATCTTTC+GGG | - | chr5_2:18481802-18481821 | None:intergenic | 40.0% | |
| AGATCCAACAGTTACCATAC+GGG | - | chr5_2:18482008-18482027 | None:intergenic | 40.0% | |
| GAGATCCAACAGTTACCATA+CGG | - | chr5_2:18482009-18482028 | None:intergenic | 40.0% | |
| GATGTTAACCGTTTCCAACA+TGG | + | chr5_2:18482038-18482057 | Msa0761300:intron | 40.0% | |
| TCAAGCTTGCAATTGCATGA+GGG | + | chr5_2:18482235-18482254 | Msa0761300:intron | 40.0% | |
| GCATATGTGCTTATTTGCTC+CGG | + | chr5_2:18482415-18482434 | Msa0761300:intron | 40.0% | |
| TGCTGTACAAAATCTGTTGC+AGG | + | chr5_2:18482447-18482466 | Msa0761300:intron | 40.0% | |
| AAAATCTGTTGCAGGTACCT+GGG | + | chr5_2:18482455-18482474 | Msa0761300:intron | 40.0% | |
| ! | CAATCTTGTTTAGACTTCCC+AGG | - | chr5_2:18482475-18482494 | None:intergenic | 40.0% |
| TCAATGTCAACCTCGATCAA+GGG | + | chr5_2:18482531-18482550 | Msa0761300:CDS | 40.0% | |
| GGAGTACAAAGTTCTTGACT+AGG | - | chr5_2:18482790-18482809 | None:intergenic | 40.0% | |
| TCTAGATTTAGTGGCTCATC+AGG | + | chr5_2:18482892-18482911 | Msa0761300:CDS | 40.0% | |
| TTTACTTGCTTTAGCACAGG+TGG | - | chr5_2:18482937-18482956 | None:intergenic | 40.0% | |
| AGGGCAAAAAAATCTGTAGC+TGG | + | chr5_2:18483030-18483049 | Msa0761300:CDS | 40.0% | |
| ! | GTCGCCCATGAAATTGATTT+GGG | - | chr5_2:18483151-18483170 | None:intergenic | 40.0% |
| TGTCGCCCATGAAATTGATT+TGG | - | chr5_2:18483152-18483171 | None:intergenic | 40.0% | |
| AGCTGAAGATGAAACTCCAT+AGG | + | chr5_2:18483209-18483228 | Msa0761300:CDS | 40.0% | |
| ATTAGCTCGAGAAAAGCCTA+TGG | - | chr5_2:18483228-18483247 | None:intergenic | 40.0% | |
| TAGATTGGGCTATAGAGCAA+TGG | + | chr5_2:18483457-18483476 | Msa0761300:three_prime_UTR | 40.0% | |
| !!! | TGTAGATTTGGGTTTTGGGG+TGG | - | chr5_2:18480007-18480026 | None:intergenic | 45.0% |
| CGGAACTTGATCGCTCAAAT+TGG | - | chr5_2:18480085-18480104 | None:intergenic | 45.0% | |
| ATCAAGTTCCGTCGCTTAGA+CGG | + | chr5_2:18480094-18480113 | Msa0761300:CDS | 45.0% | |
| ! | AAAAGGAGAAGAAAGCACGG+TGG | + | chr5_2:18480246-18480265 | Msa0761300:CDS | 45.0% |
| !! | GTGGTGATGGAATTGAGGAA+GGG | + | chr5_2:18480265-18480284 | Msa0761300:CDS | 45.0% |
| GAGATTGAAGGTGGAGTAGA+AGG | + | chr5_2:18480300-18480319 | Msa0761300:CDS | 45.0% | |
| AAGGTGGAGTAGAAGGGAAA+AGG | + | chr5_2:18480307-18480326 | Msa0761300:CDS | 45.0% | |
| GAAGGGAAAAGGAAACACGA+TGG | + | chr5_2:18480318-18480337 | Msa0761300:CDS | 45.0% | |
| ! | AAAAGGAAACACGATGGTGG+TGG | + | chr5_2:18480324-18480343 | Msa0761300:CDS | 45.0% |
| GTGAAAAGGAAGAGAAAGCG+CGG | + | chr5_2:18480390-18480409 | Msa0761300:CDS | 45.0% | |
| TCTCAGGAGAGTCAAAACAC+AGG | + | chr5_2:18480924-18480943 | Msa0761300:intron | 45.0% | |
| GCATACTATGAAACCCGTCA+AGG | + | chr5_2:18481627-18481646 | Msa0761300:intron | 45.0% | |
| TTGAACTTTGCTGCCCTTGA+CGG | - | chr5_2:18481644-18481663 | None:intergenic | 45.0% | |
| GTGTATAGAAAGGCCATGTC+CGG | + | chr5_2:18481714-18481733 | Msa0761300:intron | 45.0% | |
| GAGTGAATCTTTCGGGCAAA+TGG | - | chr5_2:18481795-18481814 | None:intergenic | 45.0% | |
| GTGGCACACAATGATAGAGA+AGG | + | chr5_2:18481937-18481956 | Msa0761300:intron | 45.0% | |
| ATGTCCCGTATGGTAACTGT+TGG | + | chr5_2:18482001-18482020 | Msa0761300:intron | 45.0% | |
| AACTGTTGGATCTCGACGTT+TGG | + | chr5_2:18482015-18482034 | Msa0761300:intron | 45.0% | |
| ACTGTTGGATCTCGACGTTT+GGG | + | chr5_2:18482016-18482035 | Msa0761300:intron | 45.0% | |
| CTAGATAGATCACGTGGTCA+TGG | - | chr5_2:18482191-18482210 | None:intergenic | 45.0% | |
| CATGACCACGTGATCTATCT+AGG | + | chr5_2:18482189-18482208 | Msa0761300:intron | 45.0% | |
| GTCAAGCTTGCAATTGCATG+AGG | + | chr5_2:18482234-18482253 | Msa0761300:intron | 45.0% | |
| CAAGCTTGCAATTGCATGAG+GGG | + | chr5_2:18482236-18482255 | Msa0761300:intron | 45.0% | |
| CAAAATCTGTTGCAGGTACC+TGG | + | chr5_2:18482454-18482473 | Msa0761300:intron | 45.0% | |
| CTTGATCGAGGTTGACATTG+AGG | - | chr5_2:18482532-18482551 | None:intergenic | 45.0% | |
| CTCAATGTCAACCTCGATCA+AGG | + | chr5_2:18482530-18482549 | Msa0761300:CDS | 45.0% | |
| GTGGGTATGAGCAGTTTACT+TGG | - | chr5_2:18482601-18482620 | None:intergenic | 45.0% | |
| AGTAAACTGCTCATACCCAC+TGG | + | chr5_2:18482601-18482620 | Msa0761300:CDS | 45.0% | |
| ATACCCACTGGAAAGAAGGT+TGG | + | chr5_2:18482613-18482632 | Msa0761300:CDS | 45.0% | |
| TTGCCAACCTTCTTTCCAGT+GGG | - | chr5_2:18482619-18482638 | None:intergenic | 45.0% | |
| TTTGCCAACCTTCTTTCCAG+TGG | - | chr5_2:18482620-18482639 | None:intergenic | 45.0% | |
| AAGATGCTGCTCTTCTCCTA+AGG | - | chr5_2:18483008-18483027 | None:intergenic | 45.0% | |
| GAGAAGAGCAGCATCTTCAA+GGG | + | chr5_2:18483011-18483030 | Msa0761300:CDS | 45.0% | |
| TCTGTAGCTGGAGAAGGAAA+AGG | + | chr5_2:18483042-18483061 | Msa0761300:CDS | 45.0% | |
| !! | CGACACTTGTAGTTCTGATG+AGG | + | chr5_2:18483167-18483186 | Msa0761300:CDS | 45.0% |
| ACGACAGTGGGGTTTCTGTT+TGG | - | chr5_2:18479916-18479935 | None:intergenic | 50.0% | |
| TGAGTCTCGGTGATCTTCGT+GGG | - | chr5_2:18479954-18479973 | None:intergenic | 50.0% | |
| ATGAGTCTCGGTGATCTTCG+TGG | - | chr5_2:18479955-18479974 | None:intergenic | 50.0% | |
| TCATGGAGGAGGATGAGTCT+CGG | - | chr5_2:18479967-18479986 | None:intergenic | 50.0% | |
| !!! | ATTTGGGTTTTGGGGTGGTG+GGG | - | chr5_2:18480002-18480021 | None:intergenic | 50.0% |
| !!! | GATTTGGGTTTTGGGGTGGT+GGG | - | chr5_2:18480003-18480022 | None:intergenic | 50.0% |
| !!! | AGATTTGGGTTTTGGGGTGG+TGG | - | chr5_2:18480004-18480023 | None:intergenic | 50.0% |
| ! | AGAAGAAAGCACGGTGGTGA+TGG | + | chr5_2:18480252-18480271 | Msa0761300:CDS | 50.0% |
| !! | GGTGGTGATGGAATTGAGGA+AGG | + | chr5_2:18480264-18480283 | Msa0761300:CDS | 50.0% |
| ! | GTGATGGAATTGAGGAAGGG+AGG | + | chr5_2:18480268-18480287 | Msa0761300:CDS | 50.0% |
| GGGAAAAGGAAACACGATGG+TGG | + | chr5_2:18480321-18480340 | Msa0761300:CDS | 50.0% | |
| !! | CGATGGTGGTGGTGAAATAG+TGG | + | chr5_2:18480335-18480354 | Msa0761300:CDS | 50.0% |
| ! | AAAAGGAAGAGAAAGCGCGG+TGG | + | chr5_2:18480393-18480412 | Msa0761300:CDS | 50.0% |
| ! | GTGGTGGTGAAGTTGCACAA+GGG | + | chr5_2:18480412-18480431 | Msa0761300:CDS | 50.0% |
| !! | AGTTGCACAAGGGTGGACTA+AGG | + | chr5_2:18480422-18480441 | Msa0761300:CDS | 50.0% |
| CATTGCATCAGGGCTTGCAT+AGG | + | chr5_2:18481281-18481300 | Msa0761300:intron | 50.0% | |
| TGAACTTTGCTGCCCTTGAC+GGG | - | chr5_2:18481643-18481662 | None:intergenic | 50.0% | |
| ATAGCTGGATCGTGTGTCCT+AGG | + | chr5_2:18481676-18481695 | Msa0761300:intron | 50.0% | |
| ACTAATCCGCTCTGACTCTC+CGG | - | chr5_2:18481736-18481755 | None:intergenic | 50.0% | |
| GCTCACCTAGATAGATCACG+TGG | - | chr5_2:18482197-18482216 | None:intergenic | 50.0% | |
| GTTGACATTGAGGTGGTGTG+TGG | - | chr5_2:18482522-18482541 | None:intergenic | 50.0% | |
| GATCGAGGTTGACATTGAGG+TGG | - | chr5_2:18482529-18482548 | None:intergenic | 50.0% | |
| TCAACCTCGATCAAGGGCAA+AGG | + | chr5_2:18482537-18482556 | Msa0761300:CDS | 50.0% | |
| ATTGCCTTTGCCCTTGATCG+AGG | - | chr5_2:18482544-18482563 | None:intergenic | 50.0% | |
| GCTCATACCCACTGGAAAGA+AGG | + | chr5_2:18482609-18482628 | Msa0761300:CDS | 50.0% | |
| GGAGAAGAGCAGCATCTTCA+AGG | + | chr5_2:18483010-18483029 | Msa0761300:CDS | 50.0% | |
| GAGGACAATGACGATGACAC+TGG | + | chr5_2:18483186-18483205 | Msa0761300:CDS | 50.0% | |
| CAGGTGGGTAAACGACAGTG+GGG | - | chr5_2:18479927-18479946 | None:intergenic | 55.0% | |
| CCAGGTGGGTAAACGACAGT+GGG | - | chr5_2:18479928-18479947 | None:intergenic | 55.0% | |
| GAGTCTCGGTGATCTTCGTG+GGG | - | chr5_2:18479953-18479972 | None:intergenic | 55.0% | |
| CTAGGAGACCGTCTAAGCGA+CGG | - | chr5_2:18480105-18480124 | None:intergenic | 55.0% | |
| ! | GAAAAGTAGCGGGGGAGTTG+TGG | + | chr5_2:18480209-18480228 | Msa0761300:CDS | 55.0% |
| !! | GCACGGTGGTGATGGAATTG+AGG | + | chr5_2:18480260-18480279 | Msa0761300:CDS | 55.0% |
| ! | GGTGGTGGTGAAGTTGCACA+AGG | + | chr5_2:18480411-18480430 | Msa0761300:CDS | 55.0% |
| GTGGTGAAGTTGCACAAGGG+TGG | + | chr5_2:18480415-18480434 | Msa0761300:CDS | 55.0% | |
| CTTTGTGTGCAGCATCGCAG+CGG | - | chr5_2:18481151-18481170 | None:intergenic | 55.0% | |
| ! | CATTGCAGCATGGCTTGCAG+TGG | + | chr5_2:18481181-18481200 | Msa0761300:intron | 55.0% |
| CATTGTGTGCCACATCGCAG+CGG | - | chr5_2:18481930-18481949 | None:intergenic | 55.0% | |
| AGGCTGCACAATGTCCCGTA+TGG | + | chr5_2:18481991-18482010 | Msa0761300:intron | 55.0% | |
| ! | CCCACTGTCGTTTACCCACC+TGG | + | chr5_2:18479925-18479944 | Msa0761300:CDS | 60.0% |
| GCCAGGTGGGTAAACGACAG+TGG | - | chr5_2:18479929-18479948 | None:intergenic | 60.0% | |
| ! | ATCTTCGTGGGGTGCCAGGT+GGG | - | chr5_2:18479942-18479961 | None:intergenic | 60.0% |
| AGCGGGGGAGTTGTGGTTGA+AGG | + | chr5_2:18480216-18480235 | Msa0761300:CDS | 60.0% | |
| GGGGGAGTTGTGGTTGAAGG+TGG | + | chr5_2:18480219-18480238 | Msa0761300:CDS | 60.0% | |
| ! | AGGAAGAGAAAGCGCGGTGG+TGG | + | chr5_2:18480396-18480415 | Msa0761300:CDS | 60.0% |
| TGGTAGAGTCGCACGCAGTG+TGG | + | chr5_2:18481201-18481220 | Msa0761300:intron | 60.0% | |
| CCATGTCCGGAGAGTCAGAG+CGG | + | chr5_2:18481727-18481746 | Msa0761300:intron | 60.0% | |
| GAGGTGGTGTGTGGAAGTCG+TGG | - | chr5_2:18482513-18482532 | None:intergenic | 60.0% | |
| ! | GATCTTCGTGGGGTGCCAGG+TGG | - | chr5_2:18479943-18479962 | None:intergenic | 65.0% |
| ! | GGTGATCTTCGTGGGGTGCC+AGG | - | chr5_2:18479946-18479965 | None:intergenic | 65.0% |
| CCGCTCTGACTCTCCGGACA+TGG | - | chr5_2:18481730-18481749 | None:intergenic | 65.0% | |
| ACAGTGCAGCCGCTGCGATG+TGG | + | chr5_2:18481139-18481158 | Msa0761300:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 18479910 | 18483549 | 18479910 | ID=Msa0761300;Name=Msa0761300 |
| chr5_2 | mRNA | 18479910 | 18483549 | 18479910 | ID=Msa0761300-mRNA-1;Parent=Msa0761300;Name=Msa0761300-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|319|457 |
| chr5_2 | exon | 18479910 | 18480521 | 18479910 | ID=Msa0761300-mRNA-1:exon:8009;Parent=Msa0761300-mRNA-1 |
| chr5_2 | exon | 18482469 | 18483549 | 18482469 | ID=Msa0761300-mRNA-1:exon:8010;Parent=Msa0761300-mRNA-1 |
| chr5_2 | CDS | 18479910 | 18480521 | 18479910 | ID=Msa0761300-mRNA-1:cds;Parent=Msa0761300-mRNA-1 |
| chr5_2 | CDS | 18482469 | 18483230 | 18482469 | ID=Msa0761300-mRNA-1:cds;Parent=Msa0761300-mRNA-1 |
| chr5_2 | three_prime_UTR | 18483231 | 18483549 | 18483231 | ID=Msa0761300-mRNA-1:three_prime_utr;Parent=Msa0761300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
