Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504210 | XP_020147506.2 | 93.578 | 109 | 7 | 0 | 103 | 211 | 58 | 166 | 2.33e-64 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504210 | sp|P0CG89|H4_SOYBN | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.21e-66 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504210 | A0A453EFA1 | 96.190 | 105 | 4 | 0 | 107 | 211 | 19 | 123 | 1.47e-64 | 205 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0504210 | 0.831783 | 1.372827e-55 | -8.615850e-47 |
| Msa0006110 | Msa0504210 | 0.814319 | 1.636488e-51 | -8.615850e-47 |
| Msa0017510 | Msa0504210 | 0.826302 | 2.922292e-54 | -8.615850e-47 |
| Msa0027230 | Msa0504210 | 0.801901 | 7.235226e-49 | -8.615850e-47 |
| Msa0028420 | Msa0504210 | 0.825145 | 5.499393e-54 | -8.615850e-47 |
| Msa0032430 | Msa0504210 | 0.802506 | 5.431244e-49 | -8.615850e-47 |
| Msa0054480 | Msa0504210 | 0.812251 | 4.658643e-51 | -8.615850e-47 |
| Msa0061290 | Msa0504210 | 0.800042 | 1.734885e-48 | -8.615850e-47 |
| Msa0075220 | Msa0504210 | 0.822718 | 2.038719e-53 | -8.615850e-47 |
| Msa0078900 | Msa0504210 | 0.807281 | 5.458015e-50 | -8.615850e-47 |
| Msa0079380 | Msa0504210 | 0.807634 | 4.592599e-50 | -8.615850e-47 |
| Msa0081090 | Msa0504210 | 0.806777 | 6.977218e-50 | -8.615850e-47 |
| Msa0084380 | Msa0504210 | 0.807752 | 4.336319e-50 | -8.615850e-47 |
| Msa0089630 | Msa0504210 | 0.805934 | 1.050241e-49 | -8.615850e-47 |
| Msa0092790 | Msa0504210 | 0.815281 | 1.001809e-51 | -8.615850e-47 |
| Msa0124060 | Msa0504210 | 0.846347 | 2.299320e-59 | -8.615850e-47 |
| Msa0124280 | Msa0504210 | 0.803922 | 2.766478e-49 | -8.615850e-47 |
| Msa0127050 | Msa0504210 | 0.812034 | 5.193283e-51 | -8.615850e-47 |
| Msa0127800 | Msa0504210 | 0.802374 | 5.781662e-49 | -8.615850e-47 |
| Msa0138370 | Msa0504210 | 0.812582 | 3.942735e-51 | -8.615850e-47 |
| Msa0157290 | Msa0504210 | 0.826470 | 2.664960e-54 | -8.615850e-47 |
| Msa0167520 | Msa0504210 | 0.805586 | 1.242799e-49 | -8.615850e-47 |
| Msa0168500 | Msa0504210 | 0.838614 | 2.589721e-57 | -8.615850e-47 |
| Msa0169310 | Msa0504210 | 0.814590 | 1.426104e-51 | -8.615850e-47 |
| Msa0171540 | Msa0504210 | 0.810690 | 1.016980e-50 | -8.615850e-47 |
| Msa0187120 | Msa0504210 | 0.819000 | 1.461059e-52 | -8.615850e-47 |
| Msa0212990 | Msa0504210 | 0.807666 | 4.521816e-50 | -8.615850e-47 |
| Msa0222620 | Msa0504210 | 0.820491 | 6.668095e-53 | -8.615850e-47 |
| Msa0223080 | Msa0504210 | 0.848296 | 6.707241e-60 | -8.615850e-47 |
| Msa0225100 | Msa0504210 | 0.808939 | 2.420132e-50 | -8.615850e-47 |
| Msa0392510 | Msa0504210 | 0.836382 | 9.671993e-57 | -8.615850e-47 |
| Msa0395790 | Msa0504210 | 0.802575 | 5.257091e-49 | -8.615850e-47 |
| Msa0395820 | Msa0504210 | 0.820573 | 6.387505e-53 | -8.615850e-47 |
| Msa0411430 | Msa0504210 | 0.802334 | 5.894984e-49 | -8.615850e-47 |
| Msa0440750 | Msa0504210 | 0.807777 | 4.282903e-50 | -8.615850e-47 |
| Msa0456880 | Msa0504210 | 0.845291 | 4.450524e-59 | -8.615850e-47 |
| Msa0464680 | Msa0504210 | 0.826027 | 3.398020e-54 | -8.615850e-47 |
| Msa0481530 | Msa0504210 | 0.815039 | 1.133791e-51 | -8.615850e-47 |
| Msa0264150 | Msa0504210 | 0.863374 | 2.605684e-64 | -8.615850e-47 |
| Msa0266180 | Msa0504210 | 0.815897 | 7.304487e-52 | -8.615850e-47 |
| Msa0267370 | Msa0504210 | 0.811423 | 7.053384e-51 | -8.615850e-47 |
| Msa0271530 | Msa0504210 | 0.810739 | 9.925650e-51 | -8.615850e-47 |
| Msa0276630 | Msa0504210 | 0.801930 | 7.136822e-49 | -8.615850e-47 |
| Msa0277180 | Msa0504210 | 0.803147 | 4.004940e-49 | -8.615850e-47 |
| Msa0287740 | Msa0504210 | 0.822382 | 2.440510e-53 | -8.615850e-47 |
| Msa0288080 | Msa0504210 | 0.807856 | 4.120994e-50 | -8.615850e-47 |
| Msa0300690 | Msa0504210 | 0.802207 | 6.260685e-49 | -8.615850e-47 |
| Msa0302160 | Msa0504210 | 0.848305 | 6.672357e-60 | -8.615850e-47 |
| Msa0302170 | Msa0504210 | 0.823658 | 1.230112e-53 | -8.615850e-47 |
| Msa0316810 | Msa0504210 | 0.802948 | 4.403470e-49 | -8.615850e-47 |
| Msa0330340 | Msa0504210 | 0.801828 | 7.489768e-49 | -8.615850e-47 |
| Msa0337700 | Msa0504210 | 0.805281 | 1.439937e-49 | -8.615850e-47 |
| Msa0339250 | Msa0504210 | 0.825247 | 5.200335e-54 | -8.615850e-47 |
| Msa0339490 | Msa0504210 | 0.847084 | 1.446257e-59 | -8.615850e-47 |
| Msa0339500 | Msa0504210 | 0.829208 | 5.854789e-55 | -8.615850e-47 |
| Msa0348090 | Msa0504210 | 0.807957 | 3.922130e-50 | -8.615850e-47 |
| Msa0493410 | Msa0504210 | 0.800312 | 1.528654e-48 | -8.615850e-47 |
| Msa0504210 | Msa0529890 | 0.832856 | 7.446235e-56 | -8.615850e-47 |
| Msa0504210 | Msa0530400 | 0.809196 | 2.132750e-50 | -8.615850e-47 |
| Msa0504210 | Msa0542520 | 0.814709 | 1.341721e-51 | -8.615850e-47 |
| Msa0504210 | Msa0569200 | 0.848839 | 4.746754e-60 | -8.615850e-47 |
| Msa0504210 | Msa0571130 | 0.803120 | 4.055906e-49 | -8.615850e-47 |
| Msa0504210 | Msa0585560 | 0.826427 | 2.729921e-54 | -8.615850e-47 |
| Msa0504210 | Msa0594660 | 0.811462 | 6.916085e-51 | -8.615850e-47 |
| Msa0504210 | Msa0597790 | 0.820396 | 7.011413e-53 | -8.615850e-47 |
| Msa0504210 | Msa0601750 | 0.803483 | 3.411598e-49 | -8.615850e-47 |
| Msa0504210 | Msa0615710 | 0.805997 | 1.018947e-49 | -8.615850e-47 |
| Msa0504210 | Msa0625720 | 0.828295 | 9.733303e-55 | -8.615850e-47 |
| Msa0504210 | Msa0627450 | 0.802286 | 6.029193e-49 | -8.615850e-47 |
| Msa0504210 | Msa0661650 | 0.819016 | 1.449092e-52 | -8.615850e-47 |
| Msa0504210 | Msa0663390 | 0.825640 | 4.198278e-54 | -8.615850e-47 |
| Msa0504210 | Msa0663810 | 0.832085 | 1.155760e-55 | -8.615850e-47 |
| Msa0504210 | Msa0665170 | 0.803989 | 2.679202e-49 | -8.615850e-47 |
| Msa0504210 | Msa0677410 | 0.812412 | 4.295694e-51 | -8.615850e-47 |
| Msa0504210 | Msa0715700 | 0.810060 | 1.390858e-50 | -8.615850e-47 |
| Msa0504210 | Msa0731940 | 0.802512 | 5.416284e-49 | -8.615850e-47 |
| Msa0504210 | Msa0761300 | 0.819994 | 8.671028e-53 | -8.615850e-47 |
| Msa0504210 | Msa0793800 | 0.824187 | 9.246787e-54 | -8.615850e-47 |
| Msa0504210 | Msa0808080 | 0.801988 | 6.942244e-49 | -8.615850e-47 |
| Msa0504210 | Msa0810220 | 0.803878 | 2.825537e-49 | -8.615850e-47 |
| Msa0504210 | Msa0828560 | 0.815141 | 1.076009e-51 | -8.615850e-47 |
| Msa0504210 | Msa0841850 | 0.807222 | 5.617503e-50 | -8.615850e-47 |
| Msa0504210 | Msa0861510 | 0.801917 | 7.181557e-49 | -8.615850e-47 |
| Msa0504210 | Msa0861600 | 0.810915 | 9.089446e-51 | -8.615850e-47 |
| Msa0504210 | Msa0871270 | 0.813704 | 2.237195e-51 | -8.615850e-47 |
| Msa0504210 | Msa0880140 | 0.822323 | 2.519702e-53 | -8.615850e-47 |
| Msa0504210 | Msa0892120 | 0.809767 | 1.607723e-50 | -8.615850e-47 |
| Msa0504210 | Msa0902760 | 0.809199 | 2.129688e-50 | -8.615850e-47 |
| Msa0504210 | Msa0938220 | 0.801960 | 7.037454e-49 | -8.615850e-47 |
| Msa0504210 | Msa0941190 | 0.803056 | 4.182429e-49 | -8.615850e-47 |
| Msa0504210 | Msa0959360 | 0.801631 | 8.219171e-49 | -8.615850e-47 |
| Msa0504210 | Msa0963190 | 0.809508 | 1.828129e-50 | -8.615850e-47 |
| Msa0504210 | Msa0967870 | 0.805622 | 1.221255e-49 | -8.615850e-47 |
| Msa0504210 | Msa0974070 | 0.801467 | 8.882656e-49 | -8.615850e-47 |
| Msa0504210 | Msa1013400 | 0.802703 | 4.947798e-49 | -8.615850e-47 |
| Msa0504210 | Msa1019430 | 0.819415 | 1.175352e-52 | -8.615850e-47 |
| Msa0504210 | Msa1019470 | 0.831627 | 1.499961e-55 | -8.615850e-47 |
| Msa0504210 | Msa1029490 | 0.803049 | 4.196305e-49 | -8.615850e-47 |
| Msa0504210 | Msa1036610 | 0.820777 | 5.731947e-53 | -8.615850e-47 |
| Msa0504210 | Msa1075540 | 0.839072 | 1.971341e-57 | -8.615850e-47 |
| Msa0504210 | Msa1078170 | 0.827169 | 1.814478e-54 | -8.615850e-47 |
| Msa0504210 | Msa1085260 | 0.846710 | 1.830473e-59 | -8.615850e-47 |
| Msa0504210 | Msa1093530 | 0.810092 | 1.368645e-50 | -8.615850e-47 |
| Msa0504210 | Msa1103990 | 0.818685 | 1.723124e-52 | -8.615850e-47 |
| Msa0504210 | Msa1110110 | 0.817609 | 3.018253e-52 | -8.615850e-47 |
| Msa0504210 | Msa1113170 | 0.807364 | 5.240839e-50 | -8.615850e-47 |
| Msa0504210 | Msa1115100 | 0.802707 | 4.937145e-49 | -8.615850e-47 |
| Msa0504210 | Msa1123380 | 0.876332 | 1.518710e-68 | -8.615850e-47 |
| Msa0504210 | Msa1124020 | 0.817960 | 2.514051e-52 | -8.615850e-47 |
| Msa0504210 | Msa1135470 | 0.803755 | 2.996225e-49 | -8.615850e-47 |
| Msa0504210 | Msa1137570 | 0.820985 | 5.135082e-53 | -8.615850e-47 |
| Msa0504210 | Msa1142020 | 0.809257 | 2.069184e-50 | -8.615850e-47 |
| Msa0504210 | Msa1162780 | 0.828042 | 1.120218e-54 | -8.615850e-47 |
| Msa0504210 | Msa1167340 | 0.803268 | 3.779549e-49 | -8.615850e-47 |
| Msa0504210 | Msa1189070 | 0.818807 | 1.616072e-52 | -8.615850e-47 |
| Msa0504210 | Msa1193290 | 0.836452 | 9.282376e-57 | -8.615850e-47 |
| Msa0504210 | Msa1203710 | 0.812106 | 5.008890e-51 | -8.615850e-47 |
| Msa0504210 | Msa1208880 | 0.808758 | 2.645662e-50 | -8.615850e-47 |
| Msa0504210 | Msa1221060 | 0.858067 | 1.062663e-62 | -8.615850e-47 |
| Msa0504210 | Msa1228200 | 0.810046 | 1.400373e-50 | -8.615850e-47 |
| Msa0504210 | Msa1232740 | 0.809147 | 2.184229e-50 | -8.615850e-47 |
| Msa0504210 | Msa1236410 | 0.804313 | 2.293614e-49 | -8.615850e-47 |
| Msa0504210 | Msa1245930 | 0.818805 | 1.618137e-52 | -8.615850e-47 |
| Msa0504210 | Msa1253020 | 0.801754 | 7.756036e-49 | -8.615850e-47 |
| Msa0504210 | Msa1259060 | 0.804548 | 2.049286e-49 | -8.615850e-47 |
| Msa0504210 | Msa1263790 | 0.825991 | 3.465711e-54 | -8.615850e-47 |
| Msa0504210 | Msa1277660 | 0.804043 | 2.610071e-49 | -8.615850e-47 |
| Msa0504210 | Msa1284550 | 0.821091 | 4.853373e-53 | -8.615850e-47 |
| Msa0504210 | Msa1284680 | 0.804410 | 2.189446e-49 | -8.615850e-47 |
| Msa0504210 | Msa1297230 | 0.817230 | 3.673121e-52 | -8.615850e-47 |
| Msa0504210 | Msa1303240 | 0.841303 | 5.156769e-58 | -8.615850e-47 |
| Msa0504210 | Msa1303250 | 0.845219 | 4.654603e-59 | -8.615850e-47 |
| Msa0504210 | Msa1309030 | 0.813866 | 2.060810e-51 | -8.615850e-47 |
| Msa0504210 | Msa1313320 | 0.807660 | 4.533953e-50 | -8.615850e-47 |
| Msa0504210 | Msa1333480 | 0.839978 | 1.146759e-57 | -8.615850e-47 |
| Msa0504210 | Msa1361400 | 0.831578 | 1.541664e-55 | -8.615850e-47 |
| Msa0504210 | Msa1361410 | 0.850653 | 1.477741e-60 | -8.615850e-47 |
| Msa0504210 | Msa1373100 | 0.843314 | 1.511848e-58 | -8.615850e-47 |
| Msa0504210 | Msa1382620 | 0.820577 | 6.374872e-53 | -8.615850e-47 |
| Msa0504210 | Msa1392780 | 0.814861 | 1.241978e-51 | -8.615850e-47 |
| Msa0504210 | Msa1412530 | 0.803659 | 3.137564e-49 | -8.615850e-47 |
| Msa0504210 | Msa1422950 | 0.843452 | 1.389233e-58 | -8.615850e-47 |
| Msa0504210 | Msa1423350 | 0.803977 | 2.694117e-49 | -8.615850e-47 |
| Msa0504210 | Msa1440310 | 0.808571 | 2.900413e-50 | -8.615850e-47 |
| Msa0504210 | Msa1440880 | 0.826107 | 3.252535e-54 | -8.615850e-47 |
| Msa0504210 | Msa1446810 | 0.814833 | 1.259595e-51 | -8.615850e-47 |
| Msa0504210 | Msa1446820 | 0.844240 | 8.545598e-59 | -8.615850e-47 |
| Msa0504210 | Msa1451160 | 0.853131 | 2.925495e-61 | -8.615850e-47 |
| Msa0504210 | Msa1461300 | 0.812784 | 3.562315e-51 | -8.615850e-47 |
| Msa0504210 | Msa1466540 | 0.817165 | 3.799085e-52 | -8.615850e-47 |
| Msa0504210 | Msa1466920 | 0.815583 | 8.584629e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504210 | MtrunA17_Chr5g0425951 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr4g0030431 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr3g0100121 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr3g0113681 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr2g0327641 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr3g0103351 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr8g0352791 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr3g0103821 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr3g0104031 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr7g0225731 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr3g0103801 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr3g0103881 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr7g0262791 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 5.31e-67 | 201 |
| Msa0504210 | MtrunA17_Chr4g0072411 | 100.000 | 93 | 0 | 0 | 119 | 211 | 69 | 161 | 2.04e-55 | 173 |
| Msa0504210 | MtrunA17_Chr3g0104021 | 72.973 | 111 | 15 | 2 | 1 | 111 | 1 | 96 | 8.83e-47 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504210 | AT3G53730.1 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT1G07820.2 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT1G07820.1 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT5G59690.1 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT3G46320.1 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT2G28740.1 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT1G07660.1 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT3G45930.1 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT5G59970.1 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT5G59970.2 | 97.087 | 103 | 3 | 0 | 109 | 211 | 1 | 103 | 7.33e-67 | 201 |
| Msa0504210 | AT1G07660.2 | 80.583 | 103 | 3 | 1 | 109 | 211 | 1 | 86 | 1.57e-49 | 156 |
Find 64 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCACTATGGACGAATTT+TGG | 0.074860 | 3_4:+48403942 | Msa0504210:CDS |
| GTCTTACCAGAATTTGAATT+TGG | 0.175882 | 3_4:-48403560 | None:intergenic |
| GCTTCAACCAATTCAATTCT+TGG | 0.180865 | 3_4:-48403920 | None:intergenic |
| CAACGACATCCGTCATTGTT+TGG | 0.236429 | 3_4:-48403814 | None:intergenic |
| CTTGAGTTCGCCATAGTTGC+TGG | 0.290409 | 3_4:-48403773 | None:intergenic |
| AACGACATCCGTCATTGTTT+GGG | 0.292205 | 3_4:-48403813 | None:intergenic |
| ACCAATTCAATTCTTGGTCT+TGG | 0.307336 | 3_4:-48403914 | None:intergenic |
| CAAAATCCAAATTCAAATTC+TGG | 0.326921 | 3_4:+48403554 | Msa0504210:CDS |
| CTACCACCACATGTTGCTAT+TGG | 0.348793 | 3_4:+48403872 | Msa0504210:CDS |
| TCCAAGACCAAGAATTGAAT+TGG | 0.372781 | 3_4:+48403913 | Msa0504210:CDS |
| CTTGGAGTCATGGAAGAGTT+TGG | 0.376764 | 3_4:-48403896 | None:intergenic |
| TCATTTATGTTGCAACAAAC+TGG | 0.384637 | 3_4:+48403728 | Msa0504210:CDS |
| TACAAGAGCTCCAGCAACTA+TGG | 0.400312 | 3_4:+48403763 | Msa0504210:CDS |
| TACCACCACATGTTGCTATT+GGG | 0.403191 | 3_4:+48403873 | Msa0504210:CDS |
| AGGTGTCTTGAAGATCTTCT+TGG | 0.405705 | 3_4:+48408682 | Msa0504210:CDS |
| ATTGGTTGAAGCAATCACTA+TGG | 0.428654 | 3_4:+48403931 | Msa0504210:CDS |
| AGACAAGGAAGAACCCTCTA+TGG | 0.431401 | 3_4:+48408791 | Msa0504210:CDS |
| GGAAGAACCCTCTATGGTTT+CGG | 0.438131 | 3_4:+48408797 | Msa0504210:CDS |
| TTGGGCTGGATTGGATGATT+CGG | 0.450992 | 3_4:+48403961 | Msa0504210:CDS |
| ACATGTGGTGGTAGCGGCGG+TGG | 0.454591 | 3_4:-48403863 | None:intergenic |
| CTTGCCAATCGACGAATGGC+AGG | 0.473855 | 3_4:-48408611 | None:intergenic |
| ATCAACCTCCGAAACCATAG+AGG | 0.481091 | 3_4:-48408805 | None:intergenic |
| GGTAAGGGACTCGGAAAGGG+AGG | 0.488695 | 3_4:+48408536 | Msa0504210:CDS |
| AGGTCGTGGAAAGGGAGGTA+AGG | 0.492819 | 3_4:+48408520 | Msa0504210:intron |
| AATTCTTGGTCTTGGAGTCA+TGG | 0.493161 | 3_4:-48403906 | None:intergenic |
| GGAGGTAAGGGACTCGGAAA+GGG | 0.499726 | 3_4:+48408533 | Msa0504210:CDS |
| AGCGGCGGTGGTGGTAATGT+TGG | 0.500567 | 3_4:-48403851 | None:intergenic |
| AAAGCCTGCCATTCGTCGAT+TGG | 0.502268 | 3_4:+48408607 | Msa0504210:CDS |
| GAAGATCTTCAAGACACCTC+TGG | 0.510902 | 3_4:-48408678 | None:intergenic |
| TGTGGTGGTAGCGGCGGTGG+TGG | 0.512723 | 3_4:-48403860 | None:intergenic |
| GGGAGGTAAGGGACTCGGAA+AGG | 0.518226 | 3_4:+48408532 | Msa0504210:CDS |
| AGTTCTTCGTGATAACATCC+AGG | 0.522451 | 3_4:+48408577 | Msa0504210:CDS |
| GGAAAGGGAGGTAAGGGACT+CGG | 0.535187 | 3_4:+48408527 | Msa0504210:CDS |
| TTACATACACTGAGCACGCT+AGG | 0.546510 | 3_4:+48408726 | Msa0504210:CDS |
| AAAATGTCAGGTCGTGGAAA+GGG | 0.548959 | 3_4:+48408512 | Msa0504210:intron |
| ATAGCAACATGTGGTGGTAG+CGG | 0.555362 | 3_4:-48403869 | None:intergenic |
| GAGGAAGACCGTCACTGCCA+TGG | 0.562767 | 3_4:+48408748 | Msa0504210:CDS |
| GGTCGTGGAAAGGGAGGTAA+GGG | 0.564245 | 3_4:+48408521 | Msa0504210:intron |
| AGGGAGGTGCAAAGAGACAT+AGG | 0.568952 | 3_4:+48408552 | Msa0504210:CDS |
| GTCTATGCTTTGAAGAGACA+AGG | 0.570048 | 3_4:+48408776 | Msa0504210:CDS |
| GACAACATCCATGGCAGTGA+CGG | 0.581812 | 3_4:-48408756 | None:intergenic |
| GAAAATGTCAGGTCGTGGAA+AGG | 0.584382 | 3_4:+48408511 | Msa0504210:intron |
| TCTTCTTGCCAATCGACGAA+TGG | 0.584939 | 3_4:-48408615 | None:intergenic |
| GGCGGTGTTAAGAGAATCAG+TGG | 0.595979 | 3_4:+48408638 | Msa0504210:CDS |
| GTTGGTTGAAGCACTGTCGA+AGG | 0.612124 | 3_4:-48403993 | None:intergenic |
| CGTCGATTGGCAAGAAGAGG+CGG | 0.616453 | 3_4:+48408620 | Msa0504210:CDS |
| ATTCGTCGATTGGCAAGAAG+AGG | 0.617367 | 3_4:+48408617 | Msa0504210:CDS |
| TGGCAGGCTTTGTGATACCC+TGG | 0.617511 | 3_4:-48408595 | None:intergenic |
| ACGACATCCGTCATTGTTTG+GGG | 0.618527 | 3_4:-48403812 | None:intergenic |
| GCAACATGTGGTGGTAGCGG+CGG | 0.624896 | 3_4:-48403866 | None:intergenic |
| GCAACAAACTGGTGCCTCTG+TGG | 0.630045 | 3_4:+48403739 | Msa0504210:CDS |
| AGAACCCTCTATGGTTTCGG+AGG | 0.630900 | 3_4:+48408800 | Msa0504210:CDS |
| CAAACAATGACGGATGTCGT+TGG | 0.633433 | 3_4:+48403815 | Msa0504210:CDS |
| CAAAGCATAGACAACATCCA+TGG | 0.634439 | 3_4:-48408765 | None:intergenic |
| GGCCCAATAGCAACATGTGG+TGG | 0.638969 | 3_4:-48403875 | None:intergenic |
| GTTCTTCGTGATAACATCCA+GGG | 0.641996 | 3_4:+48408578 | Msa0504210:CDS |
| TTAGAATCAAGCATGGAGCA+TGG | 0.643015 | 3_4:+48403509 | None:intergenic |
| ATGTCAGGTCGTGGAAAGGG+AGG | 0.643397 | 3_4:+48408515 | Msa0504210:intron |
| CATTGTGCCCCAAACAATGA+CGG | 0.660072 | 3_4:+48403805 | Msa0504210:CDS |
| TCAACCTCCGAAACCATAGA+GGG | 0.666233 | 3_4:-48408804 | None:intergenic |
| CATACACTGAGCACGCTAGG+AGG | 0.680607 | 3_4:+48408729 | Msa0504210:CDS |
| TTTGGCCCAATAGCAACATG+TGG | 0.698123 | 3_4:-48403878 | None:intergenic |
| TTGATCTATGAAGAAACCAG+AGG | 0.704889 | 3_4:+48408662 | Msa0504210:CDS |
| TGGAGCTCTTGTATCCACAG+AGG | 0.773217 | 3_4:-48403753 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAATAATGAAAGTATTT+TGG | + | chr3_4:48403698-48403717 | Msa0504210:intron | 10.0% |
| !!! | GATTTTTATATTTTTTTCTA+AGG | + | chr3_4:48404192-48404211 | Msa0504210:intron | 10.0% |
| !! | ATTTAATATATTAAATGAGA+AGG | + | chr3_4:48404281-48404300 | Msa0504210:intron | 10.0% |
| !! | TTTAATATATTAAATGAGAA+GGG | + | chr3_4:48404282-48404301 | Msa0504210:intron | 10.0% |
| !! | TAAAAACTTAATAAAGTAAT+AGG | - | chr3_4:48406587-48406606 | None:intergenic | 10.0% |
| !! | AATGTATATTATAATATAAG+AGG | + | chr3_4:48406622-48406641 | Msa0504210:intron | 10.0% |
| !! | ATGTATATTATAATATAAGA+GGG | + | chr3_4:48406623-48406642 | Msa0504210:intron | 10.0% |
| !!! | ACATATAATGCTTTTATTAT+TGG | + | chr3_4:48403671-48403690 | Msa0504210:intron | 15.0% |
| !! | TATAAAAGAAATATGAAAGT+TGG | - | chr3_4:48404014-48404033 | None:intergenic | 15.0% |
| !! | GATTATAAAATAAATGACTA+AGG | + | chr3_4:48404086-48404105 | Msa0504210:intron | 15.0% |
| !! | ATAAACTTTAAACATAAACA+AGG | - | chr3_4:48404238-48404257 | None:intergenic | 15.0% |
| !! | ACATACATCATAATTTATAT+TGG | + | chr3_4:48404831-48404850 | Msa0504210:intron | 15.0% |
| !!! | ATTTTCCATTATTAAAAAGA+GGG | - | chr3_4:48405125-48405144 | None:intergenic | 15.0% |
| !!! | AATTTTCCATTATTAAAAAG+AGG | - | chr3_4:48405126-48405145 | None:intergenic | 15.0% |
| !!! | TTTCTTTCTTTTTTTAATGT+CGG | - | chr3_4:48405261-48405280 | None:intergenic | 15.0% |
| !!! | CTTTTATTTTTTATGAACAA+TGG | - | chr3_4:48405381-48405400 | None:intergenic | 15.0% |
| !! | CATTGTTCATAAAAAATAAA+AGG | + | chr3_4:48405379-48405398 | Msa0504210:intron | 15.0% |
| !!! | TACATATCGATTATATATTA+TGG | - | chr3_4:48405558-48405577 | None:intergenic | 15.0% |
| !!! | ATCAATTTTTTGGTTAATAT+AGG | + | chr3_4:48405650-48405669 | Msa0504210:intron | 15.0% |
| !! | TTAAAATTTCGATACATTAA+GGG | - | chr3_4:48405833-48405852 | None:intergenic | 15.0% |
| !!! | TTTAAAATTTCGATACATTA+AGG | - | chr3_4:48405834-48405853 | None:intergenic | 15.0% |
| !!! | AACGAAATATTTTAATATCA+AGG | - | chr3_4:48405894-48405913 | None:intergenic | 15.0% |
| !!! | ACAATAACTCTTTTTATATA+GGG | - | chr3_4:48405998-48406017 | None:intergenic | 15.0% |
| !!! | TTATTAAGTTTTTACTTTCA+AGG | + | chr3_4:48406593-48406612 | Msa0504210:intron | 15.0% |
| !!! | TATTAAGTTTTTACTTTCAA+GGG | + | chr3_4:48406594-48406613 | Msa0504210:intron | 15.0% |
| !! | AGAAAAAAAAATCAAGTTTA+GGG | - | chr3_4:48406841-48406860 | None:intergenic | 15.0% |
| !! | AAGAAAAAAAAATCAAGTTT+AGG | - | chr3_4:48406842-48406861 | None:intergenic | 15.0% |
| !!! | TATATAAATTTTCAAGTTCA+TGG | + | chr3_4:48407615-48407634 | Msa0504210:intron | 15.0% |
| !!! | ATATAAATTTTCAAGTTCAT+GGG | + | chr3_4:48407616-48407635 | Msa0504210:intron | 15.0% |
| !!! | ATTGAAGTTTTATTAATTTC+AGG | + | chr3_4:48407726-48407745 | Msa0504210:intron | 15.0% |
| !!! | TTGAAGTTTTATTAATTTCA+GGG | + | chr3_4:48407727-48407746 | Msa0504210:intron | 15.0% |
| !! | TTGAATATAATCATATTTGT+AGG | + | chr3_4:48407961-48407980 | Msa0504210:intron | 15.0% |
| !! | GATTTATGAAATAATCTTTA+GGG | + | chr3_4:48408131-48408150 | Msa0504210:intron | 15.0% |
| !!! | TTTATATTTTTTTCTAAGGG+TGG | + | chr3_4:48404196-48404215 | Msa0504210:intron | 20.0% |
| !!! | TTTTGTGAAATTTAAGAGAA+TGG | + | chr3_4:48404406-48404425 | Msa0504210:intron | 20.0% |
| !! | ATCTTTAATTAAAGCTTCAA+TGG | + | chr3_4:48404504-48404523 | Msa0504210:intron | 20.0% |
| !!! | GTCAAGAAAATTATGATTTT+GGG | - | chr3_4:48404736-48404755 | None:intergenic | 20.0% |
| !!! | AGTCAAGAAAATTATGATTT+TGG | - | chr3_4:48404737-48404756 | None:intergenic | 20.0% |
| !!! | CATCATAATTTATATTGGTT+TGG | + | chr3_4:48404836-48404855 | Msa0504210:intron | 20.0% |
| !!! | TTCTTTCTTTTTTTAATGTC+GGG | - | chr3_4:48405260-48405279 | None:intergenic | 20.0% |
| !! | ACTGGTATTATTTATGTTAT+TGG | - | chr3_4:48405593-48405612 | None:intergenic | 20.0% |
| !!! | TCAACAATATATTTTATGAC+TGG | - | chr3_4:48405611-48405630 | None:intergenic | 20.0% |
| !!! | CTTTTTATGTTTCAATTATG+AGG | + | chr3_4:48405760-48405779 | Msa0504210:intron | 20.0% |
| !! | ATAATAAGTAAGTCTATTGA+AGG | - | chr3_4:48405934-48405953 | None:intergenic | 20.0% |
| !! | ACAATAAGTAAGTACATATA+AGG | - | chr3_4:48405966-48405985 | None:intergenic | 20.0% |
| !!! | CACAATAACTCTTTTTATAT+AGG | - | chr3_4:48405999-48406018 | None:intergenic | 20.0% |
| !!! | TTAGAATTTTGATACATTGA+AGG | + | chr3_4:48406085-48406104 | Msa0504210:intron | 20.0% |
| !!! | AATTGTTTTGATGAACTTAA+TGG | - | chr3_4:48406400-48406419 | None:intergenic | 20.0% |
| !! | AAAAAAAAATCAAGTTTAGG+GGG | - | chr3_4:48406839-48406858 | None:intergenic | 20.0% |
| !! | GAAAAAAAAATCAAGTTTAG+GGG | - | chr3_4:48406840-48406859 | None:intergenic | 20.0% |
| !! | GCACATAAATAATATATGAT+TGG | - | chr3_4:48407392-48407411 | None:intergenic | 20.0% |
| !!! | TATAAATTTTCAAGTTCATG+GGG | + | chr3_4:48407617-48407636 | Msa0504210:intron | 20.0% |
| !!! | TGAAGTTTTATTAATTTCAG+GGG | + | chr3_4:48407728-48407747 | Msa0504210:intron | 20.0% |
| !! | CGATTTATGAAATAATCTTT+AGG | + | chr3_4:48408130-48408149 | Msa0504210:intron | 20.0% |
| !! | AATAATGTAACCAAAAAAAG+AGG | + | chr3_4:48408159-48408178 | Msa0504210:intron | 20.0% |
| !! | ATAATGTAACCAAAAAAAGA+GGG | + | chr3_4:48408160-48408179 | Msa0504210:intron | 20.0% |
| !! | ACAGAAAATTTGAGAAATTA+GGG | - | chr3_4:48408490-48408509 | None:intergenic | 20.0% |
| !! | AACAGAAAATTTGAGAAATT+AGG | - | chr3_4:48408491-48408510 | None:intergenic | 20.0% |
| !!! | ATTTTGATCATTGTGAAAGA+AGG | - | chr3_4:48403540-48403559 | None:intergenic | 25.0% |
| ! | CAAAATCCAAATTCAAATTC+TGG | + | chr3_4:48403554-48403573 | Msa0504210:CDS | 25.0% |
| !! | TAAACATAAACAAGGTGTTT+AGG | - | chr3_4:48404230-48404249 | None:intergenic | 25.0% |
| !! | TGAAAAGAGTTTCAAACTTT+TGG | + | chr3_4:48404358-48404377 | Msa0504210:intron | 25.0% |
| ! | TTTACACAAGAAAACTAACA+AGG | + | chr3_4:48404591-48404610 | Msa0504210:intron | 25.0% |
| !! | AATTTTCTTGACTACTATGA+TGG | + | chr3_4:48404744-48404763 | Msa0504210:intron | 25.0% |
| !! | ACTTGATTCAAGTACTTTTA+TGG | + | chr3_4:48404980-48404999 | Msa0504210:intron | 25.0% |
| !!! | TATTAGTCTTAGTCGAATTA+TGG | - | chr3_4:48405074-48405093 | None:intergenic | 25.0% |
| !! | ATACTCCCTCTTTTTAATAA+TGG | + | chr3_4:48405117-48405136 | Msa0504210:intron | 25.0% |
| !!! | CAATCTTTGAAATCATTGTA+AGG | + | chr3_4:48405154-48405173 | Msa0504210:intron | 25.0% |
| !!! | TCTTTCTTTTTTTAATGTCG+GGG | - | chr3_4:48405259-48405278 | None:intergenic | 25.0% |
| ! | AAGAGTTATTGTGAGTATTA+AGG | + | chr3_4:48406006-48406025 | Msa0504210:intron | 25.0% |
| ! | AGAGTTATTGTGAGTATTAA+GGG | + | chr3_4:48406007-48406026 | Msa0504210:intron | 25.0% |
| ! | TACTCTCACAAATAATTGAA+GGG | - | chr3_4:48406159-48406178 | None:intergenic | 25.0% |
| ! | TTACTCTCACAAATAATTGA+AGG | - | chr3_4:48406160-48406179 | None:intergenic | 25.0% |
| !! | AGTTATCGGTTATGAAAAAA+TGG | - | chr3_4:48406325-48406344 | None:intergenic | 25.0% |
| ! | GATTAAAGACAAGTAGTTAT+CGG | - | chr3_4:48406339-48406358 | None:intergenic | 25.0% |
| ! | AAATAAAAGTGAGTTAGTTG+TGG | - | chr3_4:48406481-48406500 | None:intergenic | 25.0% |
| ! | ATTAACGTTGTACAATTTCA+GGG | - | chr3_4:48406722-48406741 | None:intergenic | 25.0% |
| ! | TGACTAACAGAAAAATTTGA+CGG | - | chr3_4:48407694-48407713 | None:intergenic | 25.0% |
| !!! | TGATAATGCAATCACTTTTA+AGG | - | chr3_4:48406867-48406886 | None:intergenic | 25.0% |
| ! | ATTGCATTATCACTTAATTG+TGG | + | chr3_4:48406875-48406894 | Msa0504210:intron | 25.0% |
| ! | TTACTTCTCTCACTTTATAA+AGG | - | chr3_4:48407221-48407240 | None:intergenic | 25.0% |
| !! | ATAAAGGAAGTGGAAATTTT+TGG | + | chr3_4:48407304-48407323 | Msa0504210:intron | 25.0% |
| ! | TACCAAGATGTCAAAATATA+TGG | - | chr3_4:48407356-48407375 | None:intergenic | 25.0% |
| !! | TTTGACATCTTGGTAATTAT+TGG | + | chr3_4:48407361-48407380 | Msa0504210:intron | 25.0% |
| ! | TATCATTAGACTCTAATACA+TGG | + | chr3_4:48407482-48407501 | Msa0504210:intron | 25.0% |
| ! | GTTAATGTTTGATCGTTTAA+AGG | + | chr3_4:48407504-48407523 | Msa0504210:intron | 25.0% |
| ! | ATCGTTTAAAGGAACATATA+TGG | + | chr3_4:48407515-48407534 | Msa0504210:intron | 25.0% |
| !!! | GTATATTAGCTAAGTTTTGA+TGG | - | chr3_4:48407548-48407567 | None:intergenic | 25.0% |
| ! | TGACTAACAGAAAAATTTGA+CGG | + | chr3_4:48407694-48407713 | Msa0504210:intron | 25.0% |
| !!! | GAAGTTTTATTAATTTCAGG+GGG | + | chr3_4:48407729-48407748 | Msa0504210:intron | 25.0% |
| !!! | AAGTTTTATTAATTTCAGGG+GGG | + | chr3_4:48407730-48407749 | Msa0504210:intron | 25.0% |
| !! | ACGAAACATACAATTTTAGA+GGG | + | chr3_4:48407759-48407778 | Msa0504210:intron | 25.0% |
| !! | AATATGCACTCTATCAATTT+TGG | - | chr3_4:48407881-48407900 | None:intergenic | 25.0% |
| !!! | TATTTGTATCCCTCTTTTTT+TGG | - | chr3_4:48408172-48408191 | None:intergenic | 25.0% |
| ! | CGTCGATAAATATATTTGAA+CGG | - | chr3_4:48408281-48408300 | None:intergenic | 25.0% |
| ! | GAGTATTTATGTAAGGTAAT+TGG | - | chr3_4:48408425-48408444 | None:intergenic | 25.0% |
| !! | AATTTTCTGTTGAAAATGTC+AGG | + | chr3_4:48408500-48408519 | Msa0504210:intron | 25.0% |
| GTCTTACCAGAATTTGAATT+TGG | - | chr3_4:48403563-48403582 | None:intergenic | 30.0% | |
| TCATTTATGTTGCAACAAAC+TGG | + | chr3_4:48403728-48403747 | Msa0504210:CDS | 30.0% | |
| ! | AATCACTATGGACGAATTTT+GGG | + | chr3_4:48403943-48403962 | Msa0504210:CDS | 30.0% |
| !!! | ATATTTTTTTCTAAGGGTGG+AGG | + | chr3_4:48404199-48404218 | Msa0504210:intron | 30.0% |
| ! | CTAGATTTTACGCATAATGT+AGG | + | chr3_4:48404666-48404685 | Msa0504210:intron | 30.0% |
| ! | TTTACACACTTTGAGAACTT+AGG | + | chr3_4:48404771-48404790 | Msa0504210:intron | 30.0% |
| ! | ACATTCTAAGAAGTTATGCA+TGG | + | chr3_4:48404932-48404951 | Msa0504210:intron | 30.0% |
| !! | GTTTTATTATTGCCATTCCT+TGG | - | chr3_4:48405052-48405071 | None:intergenic | 30.0% |
| ATGTGAAGACATTATCTCAT+AGG | - | chr3_4:48405099-48405118 | None:intergenic | 30.0% | |
| !!! | CTTTCTTTTTTTAATGTCGG+GGG | - | chr3_4:48405258-48405277 | None:intergenic | 30.0% |
| !!! | TGTTGTTTTCCTTTTATCCT+TGG | - | chr3_4:48405530-48405549 | None:intergenic | 30.0% |
| TTGTTGAAGAAGTTATGAGT+AGG | + | chr3_4:48405624-48405643 | Msa0504210:intron | 30.0% | |
| TGTTGAAGAAGTTATGAGTA+GGG | + | chr3_4:48405625-48405644 | Msa0504210:intron | 30.0% | |
| TTAAGGGATTATTTAAGCGT+TGG | + | chr3_4:48406023-48406042 | Msa0504210:intron | 30.0% | |
| TAAGGGATTATTTAAGCGTT+GGG | + | chr3_4:48406024-48406043 | Msa0504210:intron | 30.0% | |
| !!! | GACTATTTTGACTAACAAAG+TGG | + | chr3_4:48406047-48406066 | Msa0504210:intron | 30.0% |
| ACTCTCACAAATAATTGAAG+GGG | - | chr3_4:48406158-48406177 | None:intergenic | 30.0% | |
| ATATGGTCGTTAATCGTATA+GGG | - | chr3_4:48406207-48406226 | None:intergenic | 30.0% | |
| TATATGGTCGTTAATCGTAT+AGG | - | chr3_4:48406208-48406227 | None:intergenic | 30.0% | |
| AGGTATAACCTTATTGTGAT+TGG | + | chr3_4:48406238-48406257 | Msa0504210:intron | 30.0% | |
| TAATCCAGCAAGAAAATAGA+AGG | + | chr3_4:48406354-48406373 | Msa0504210:intron | 30.0% | |
| AATCCAGCAAGAAAATAGAA+GGG | + | chr3_4:48406355-48406374 | Msa0504210:intron | 30.0% | |
| !!! | TGTTTTGATGAACTTAATGG+AGG | - | chr3_4:48406397-48406416 | None:intergenic | 30.0% |
| TATAATATAAGAGGGAAGTG+AGG | + | chr3_4:48406631-48406650 | Msa0504210:intron | 30.0% | |
| ACGAAACTTACAATTTCAAG+GGG | - | chr3_4:48406690-48406709 | None:intergenic | 30.0% | |
| GACGAAACTTACAATTTCAA+GGG | - | chr3_4:48406691-48406710 | None:intergenic | 30.0% | |
| TGACGAAACTTACAATTTCA+AGG | - | chr3_4:48406692-48406711 | None:intergenic | 30.0% | |
| TTAACGTTGTACAATTTCAG+GGG | - | chr3_4:48406721-48406740 | None:intergenic | 30.0% | |
| GATTAACGTTGTACAATTTC+AGG | - | chr3_4:48406723-48406742 | None:intergenic | 30.0% | |
| TAACAGAAAAATTTGACGGA+GGG | - | chr3_4:48407698-48407717 | None:intergenic | 30.0% | |
| GACGATATACAACCATATAT+TGG | + | chr3_4:48406917-48406936 | Msa0504210:intron | 30.0% | |
| !!! | GAGTTTTGAACATTAGTGTA+GGG | - | chr3_4:48406978-48406997 | None:intergenic | 30.0% |
| !!! | TGAGTTTTGAACATTAGTGT+AGG | - | chr3_4:48406979-48406998 | None:intergenic | 30.0% |
| GAAAAAACAACATCTGATGT+TGG | - | chr3_4:48407041-48407060 | None:intergenic | 30.0% | |
| ATCATTCCTTTGAATCCTAA+CGG | + | chr3_4:48407166-48407185 | Msa0504210:intron | 30.0% | |
| CACTTTATAAAGGATCTTGA+AGG | - | chr3_4:48407211-48407230 | None:intergenic | 30.0% | |
| !!! | AGCCATATATTTTGACATCT+TGG | + | chr3_4:48407351-48407370 | Msa0504210:intron | 30.0% |
| !!! | TGATTATGCAGTCACTTTTA+AGG | + | chr3_4:48407580-48407599 | Msa0504210:intron | 30.0% |
| TAACAGAAAAATTTGACGGA+GGG | + | chr3_4:48407698-48407717 | Msa0504210:intron | 30.0% | |
| ! | GACGAAACATACAATTTTAG+AGG | + | chr3_4:48407758-48407777 | Msa0504210:intron | 30.0% |
| !! | CGAAACATACAATTTTAGAG+GGG | + | chr3_4:48407760-48407779 | Msa0504210:intron | 30.0% |
| CGTATTGAGAGAAAGAATAA+TGG | - | chr3_4:48408305-48408324 | None:intergenic | 30.0% | |
| TGGATCTGAGTATTTATGTA+AGG | - | chr3_4:48408432-48408451 | None:intergenic | 30.0% | |
| TCCAAGACCAAGAATTGAAT+TGG | + | chr3_4:48403913-48403932 | Msa0504210:CDS | 35.0% | |
| ACCAATTCAATTCTTGGTCT+TGG | - | chr3_4:48403917-48403936 | None:intergenic | 35.0% | |
| GCTTCAACCAATTCAATTCT+TGG | - | chr3_4:48403923-48403942 | None:intergenic | 35.0% | |
| ATTGGTTGAAGCAATCACTA+TGG | + | chr3_4:48403931-48403950 | Msa0504210:CDS | 35.0% | |
| ! | CAATCACTATGGACGAATTT+TGG | + | chr3_4:48403942-48403961 | Msa0504210:CDS | 35.0% |
| ACTAACAAGGAACCAATCTA+TGG | + | chr3_4:48404604-48404623 | Msa0504210:intron | 35.0% | |
| CACATTCAAACTCCATAGAT+TGG | - | chr3_4:48404619-48404638 | None:intergenic | 35.0% | |
| TAGACCACTTAATCTAACCA+AGG | + | chr3_4:48405032-48405051 | Msa0504210:intron | 35.0% | |
| CATTCCTTGGTTAGATTAAG+TGG | - | chr3_4:48405039-48405058 | None:intergenic | 35.0% | |
| CACTTAATCTAACCAAGGAA+TGG | + | chr3_4:48405037-48405056 | Msa0504210:intron | 35.0% | |
| ACATTGCAACCTTAGTCATA+AGG | + | chr3_4:48405478-48405497 | Msa0504210:intron | 35.0% | |
| TTTACACGACCTTATGACTA+AGG | - | chr3_4:48405490-48405509 | None:intergenic | 35.0% | |
| TGCATACTACCAAGGATAAA+AGG | + | chr3_4:48405518-48405537 | Msa0504210:intron | 35.0% | |
| GTTGAAGAAGTTATGAGTAG+GGG | + | chr3_4:48405626-48405645 | Msa0504210:intron | 35.0% | |
| !!! | GAGTAGGGGTATCAATTTTT+TGG | + | chr3_4:48405640-48405659 | Msa0504210:intron | 35.0% |
| ATCACTTTAGTCCTTGAATG+AGG | + | chr3_4:48405788-48405807 | Msa0504210:intron | 35.0% | |
| ! | AAGGGATTATTTAAGCGTTG+GGG | + | chr3_4:48406025-48406044 | Msa0504210:intron | 35.0% |
| TGACTACTTTCTACACATTC+AGG | + | chr3_4:48406115-48406134 | Msa0504210:intron | 35.0% | |
| GACTACTTTCTACACATTCA+GGG | + | chr3_4:48406116-48406135 | Msa0504210:intron | 35.0% | |
| ATACCTGCTCTACGTATATA+TGG | - | chr3_4:48406224-48406243 | None:intergenic | 35.0% | |
| ATAACCTTATTGTGATTGGC+AGG | + | chr3_4:48406242-48406261 | Msa0504210:intron | 35.0% | |
| ! | AATCCCTTCTATTTTCTTGC+TGG | - | chr3_4:48406361-48406380 | None:intergenic | 35.0% |
| TGATGAACTTAATGGAGGTT+AGG | - | chr3_4:48406392-48406411 | None:intergenic | 35.0% | |
| ! | CAGATATTGTCGTTTCAACT+AGG | - | chr3_4:48406550-48406569 | None:intergenic | 35.0% |
| AGTTGAAACGACAATATCTG+TGG | + | chr3_4:48406550-48406569 | Msa0504210:intron | 35.0% | |
| CGAAACTTACAATTTCAAGG+GGG | - | chr3_4:48406689-48406708 | None:intergenic | 35.0% | |
| TAACGTTGTACAATTTCAGG+GGG | - | chr3_4:48406720-48406739 | None:intergenic | 35.0% | |
| AACAGAAAAATTTGACGGAG+GGG | - | chr3_4:48407699-48407718 | None:intergenic | 35.0% | |
| CTAACAGAAAAATTTGACGG+AGG | - | chr3_4:48407697-48407716 | None:intergenic | 35.0% | |
| ACAACCATATATTGGCAGTA+TGG | + | chr3_4:48406925-48406944 | Msa0504210:intron | 35.0% | |
| TGGAACAAATTGACAGCATT+TGG | + | chr3_4:48406948-48406967 | Msa0504210:intron | 35.0% | |
| ! | CATCCTTTTGATCTCTAATG+GGG | - | chr3_4:48407083-48407102 | None:intergenic | 35.0% |
| ! | CCATCCTTTTGATCTCTAAT+GGG | - | chr3_4:48407084-48407103 | None:intergenic | 35.0% |
| ! | ACCATCCTTTTGATCTCTAA+TGG | - | chr3_4:48407085-48407104 | None:intergenic | 35.0% |
| ATTAGAGATCAAAAGGATGG+TGG | + | chr3_4:48407084-48407103 | Msa0504210:intron | 35.0% | |
| TCATTCCTTTGAATCCTAAC+GGG | + | chr3_4:48407167-48407186 | Msa0504210:intron | 35.0% | |
| AAAGGATCTTGAAGGAATCA+TGG | - | chr3_4:48407203-48407222 | None:intergenic | 35.0% | |
| TGAAAGTGAGATAAGTGTGT+TGG | + | chr3_4:48407261-48407280 | Msa0504210:intron | 35.0% | |
| CACTTCCTTTATATTGTGAG+TGG | - | chr3_4:48407296-48407315 | None:intergenic | 35.0% | |
| CACTCACAATATAAAGGAAG+TGG | + | chr3_4:48407294-48407313 | Msa0504210:intron | 35.0% | |
| !! | AAGGAAGTGGAAATTTTTGG+TGG | + | chr3_4:48407307-48407326 | Msa0504210:intron | 35.0% |
| !!! | AGGAAGTGGAAATTTTTGGT+GGG | + | chr3_4:48407308-48407327 | Msa0504210:intron | 35.0% |
| GCACATAAGTGCAAAACTTT+CGG | + | chr3_4:48407646-48407665 | Msa0504210:intron | 35.0% | |
| CACATAAGTGCAAAACTTTC+GGG | + | chr3_4:48407647-48407666 | Msa0504210:intron | 35.0% | |
| ACATAAGTGCAAAACTTTCG+GGG | + | chr3_4:48407648-48407667 | Msa0504210:intron | 35.0% | |
| CTAACAGAAAAATTTGACGG+AGG | + | chr3_4:48407697-48407716 | Msa0504210:intron | 35.0% | |
| AACAGAAAAATTTGACGGAG+GGG | + | chr3_4:48407699-48407718 | Msa0504210:intron | 35.0% | |
| !! | CAATTTTGGTCACAGGATTT+TGG | - | chr3_4:48407867-48407886 | None:intergenic | 35.0% |
| !! | ACTCTATCAATTTTGGTCAC+AGG | - | chr3_4:48407874-48407893 | None:intergenic | 35.0% |
| GCATATTCGATCAATGACTT+TGG | + | chr3_4:48407894-48407913 | Msa0504210:intron | 35.0% | |
| ! | AGTTTTTGCGTTTATGAGAG+AGG | - | chr3_4:48408205-48408224 | None:intergenic | 35.0% |
| AAACGCAAAAACTAGCACAA+AGG | + | chr3_4:48408212-48408231 | Msa0504210:intron | 35.0% | |
| CAGACGCATAAGAATGAAAT+CGG | + | chr3_4:48408254-48408273 | Msa0504210:intron | 35.0% | |
| ATTCTTTCTCTCAATACGCA+CGG | + | chr3_4:48408307-48408326 | Msa0504210:intron | 35.0% | |
| !! | GTTGGATTTCAAGTTATCGA+CGG | - | chr3_4:48408347-48408366 | None:intergenic | 35.0% |
| TGAGTGAGAAAAGATGAAAG+TGG | - | chr3_4:48408452-48408471 | None:intergenic | 35.0% | |
| TTGATCTATGAAGAAACCAG+AGG | + | chr3_4:48408662-48408681 | Msa0504210:CDS | 35.0% | |
| AACGACATCCGTCATTGTTT+GGG | - | chr3_4:48403816-48403835 | None:intergenic | 40.0% | |
| ! | TACCACCACATGTTGCTATT+GGG | + | chr3_4:48403873-48403892 | Msa0504210:CDS | 40.0% |
| !! | AATTCTTGGTCTTGGAGTCA+TGG | - | chr3_4:48403909-48403928 | None:intergenic | 40.0% |
| AACATGTCATCAGAGCTGAA+TGG | - | chr3_4:48404056-48404075 | None:intergenic | 40.0% | |
| ! | TATGCCTTCTGAAAGTCTAG+AGG | + | chr3_4:48404331-48404350 | Msa0504210:intron | 40.0% |
| ! | ATGCCTTCTGAAAGTCTAGA+GGG | + | chr3_4:48404332-48404351 | Msa0504210:intron | 40.0% |
| AAACTATTGTGTCACCTGTG+AGG | - | chr3_4:48404872-48404891 | None:intergenic | 40.0% | |
| CAAAACTCACACACACACAA+AGG | - | chr3_4:48405189-48405208 | None:intergenic | 40.0% | |
| TCAGAAAACCCTTCGAACAT+TGG | + | chr3_4:48405219-48405238 | Msa0504210:intron | 40.0% | |
| TGGAATGACCAATGTTCGAA+GGG | - | chr3_4:48405230-48405249 | None:intergenic | 40.0% | |
| !!! | TTTTTTTAATGTCGGGGGAG+GGG | - | chr3_4:48405253-48405272 | None:intergenic | 40.0% |
| !!! | CTTTTTTTAATGTCGGGGGA+GGG | - | chr3_4:48405254-48405273 | None:intergenic | 40.0% |
| !!! | TCTTTTTTTAATGTCGGGGG+AGG | - | chr3_4:48405255-48405274 | None:intergenic | 40.0% |
| AGTAGTGTTGCATACTACCA+AGG | + | chr3_4:48405510-48405529 | Msa0504210:intron | 40.0% | |
| GACTATTCGTTCCTCATTCA+AGG | - | chr3_4:48405802-48405821 | None:intergenic | 40.0% | |
| GACTAACAAAGTGGACAATC+AGG | + | chr3_4:48406056-48406075 | Msa0504210:intron | 40.0% | |
| TGAAGGGGTAATAGTCACTT+TGG | - | chr3_4:48406143-48406162 | None:intergenic | 40.0% | |
| AGAGTAAGATCCCTATACGT+AGG | + | chr3_4:48406173-48406192 | Msa0504210:intron | 40.0% | |
| GATCCCTATACGTAGGTATA+CGG | + | chr3_4:48406180-48406199 | Msa0504210:intron | 40.0% | |
| AACGTTGTACAATTTCAGGG+GGG | - | chr3_4:48406719-48406738 | None:intergenic | 40.0% | |
| ACAGAAAAATTTGACGGAGG+GGG | - | chr3_4:48407700-48407719 | None:intergenic | 40.0% | |
| ACGTAAGTGCAAAACTTCGA+GGG | - | chr3_4:48406808-48406827 | None:intergenic | 40.0% | |
| ACCATATATTGGCAGTATGG+TGG | + | chr3_4:48406928-48406947 | Msa0504210:intron | 40.0% | |
| TCCACCATACTGCCAATATA+TGG | - | chr3_4:48406932-48406951 | None:intergenic | 40.0% | |
| TCACCCCATTAGAGATCAAA+AGG | + | chr3_4:48407077-48407096 | Msa0504210:intron | 40.0% | |
| CCCATTAGAGATCAAAAGGA+TGG | + | chr3_4:48407081-48407100 | Msa0504210:intron | 40.0% | |
| CATTCCTTTGAATCCTAACG+GGG | + | chr3_4:48407168-48407187 | Msa0504210:intron | 40.0% | |
| ATTCCTTTGAATCCTAACGG+GGG | + | chr3_4:48407169-48407188 | Msa0504210:intron | 40.0% | |
| AAGTGAGATAAGTGTGTTGG+TGG | + | chr3_4:48407264-48407283 | Msa0504210:intron | 40.0% | |
| GTGCACCACTCACAATATAA+AGG | + | chr3_4:48407288-48407307 | Msa0504210:intron | 40.0% | |
| !!! | GGAAGTGGAAATTTTTGGTG+GGG | + | chr3_4:48407309-48407328 | Msa0504210:intron | 40.0% |
| ! | AGTTTTCCATCTGACAAGTG+TGG | + | chr3_4:48407434-48407453 | Msa0504210:intron | 40.0% |
| CATAAGTGCAAAACTTTCGG+GGG | + | chr3_4:48407649-48407668 | Msa0504210:intron | 40.0% | |
| ACAGAAAAATTTGACGGAGG+GGG | + | chr3_4:48407700-48407719 | Msa0504210:intron | 40.0% | |
| !! | TTTGGTCACAGGATTTTGGT+AGG | - | chr3_4:48407863-48407882 | None:intergenic | 40.0% |
| CATCGTCAACATTGTAGATC+CGG | + | chr3_4:48407917-48407936 | Msa0504210:intron | 40.0% | |
| GCAAAAACTAGCACAAAGGA+AGG | + | chr3_4:48408216-48408235 | Msa0504210:intron | 40.0% | |
| TTCATTCTTATGCGTCTGTG+CGG | - | chr3_4:48408252-48408271 | None:intergenic | 40.0% | |
| AAAATGTCAGGTCGTGGAAA+GGG | + | chr3_4:48408512-48408531 | Msa0504210:intron | 40.0% | |
| AGTTCTTCGTGATAACATCC+AGG | + | chr3_4:48408577-48408596 | Msa0504210:CDS | 40.0% | |
| GTTCTTCGTGATAACATCCA+GGG | + | chr3_4:48408578-48408597 | Msa0504210:CDS | 40.0% | |
| AGGTGTCTTGAAGATCTTCT+TGG | + | chr3_4:48408682-48408701 | Msa0504210:CDS | 40.0% | |
| CAAAGCATAGACAACATCCA+TGG | - | chr3_4:48408768-48408787 | None:intergenic | 40.0% | |
| !! | GTCTATGCTTTGAAGAGACA+AGG | + | chr3_4:48408776-48408795 | Msa0504210:CDS | 40.0% |
| TACAAGAGCTCCAGCAACTA+TGG | + | chr3_4:48403763-48403782 | Msa0504210:CDS | 45.0% | |
| CATTGTGCCCCAAACAATGA+CGG | + | chr3_4:48403805-48403824 | Msa0504210:CDS | 45.0% | |
| ACGACATCCGTCATTGTTTG+GGG | - | chr3_4:48403815-48403834 | None:intergenic | 45.0% | |
| CAACGACATCCGTCATTGTT+TGG | - | chr3_4:48403817-48403836 | None:intergenic | 45.0% | |
| !! | CAAACAATGACGGATGTCGT+TGG | + | chr3_4:48403815-48403834 | Msa0504210:CDS | 45.0% |
| ATAGCAACATGTGGTGGTAG+CGG | - | chr3_4:48403872-48403891 | None:intergenic | 45.0% | |
| CTACCACCACATGTTGCTAT+TGG | + | chr3_4:48403872-48403891 | Msa0504210:CDS | 45.0% | |
| TTTGGCCCAATAGCAACATG+TGG | - | chr3_4:48403881-48403900 | None:intergenic | 45.0% | |
| CTTGGAGTCATGGAAGAGTT+TGG | - | chr3_4:48403899-48403918 | None:intergenic | 45.0% | |
| ! | ACTATGGACGAATTTTGGGC+TGG | + | chr3_4:48403947-48403966 | Msa0504210:CDS | 45.0% |
| ! | TTGGGCTGGATTGGATGATT+CGG | + | chr3_4:48403961-48403980 | Msa0504210:CDS | 45.0% |
| ! | TGCCTTCTGAAAGTCTAGAG+GGG | + | chr3_4:48404333-48404352 | Msa0504210:intron | 45.0% |
| ATCCCCTCTAGACTTTCAGA+AGG | - | chr3_4:48404338-48404357 | None:intergenic | 45.0% | |
| GTGGAATGACCAATGTTCGA+AGG | - | chr3_4:48405231-48405250 | None:intergenic | 45.0% | |
| TGATGAGAGAGAGAGAGAGA+GGG | - | chr3_4:48405679-48405698 | None:intergenic | 45.0% | |
| TTGATGAGAGAGAGAGAGAG+AGG | - | chr3_4:48405680-48405699 | None:intergenic | 45.0% | |
| CTCTCTCTCTCTCTCATCAA+TGG | + | chr3_4:48405680-48405699 | Msa0504210:intron | 45.0% | |
| TCTCTCATCAATGGACGTAG+TGG | + | chr3_4:48405689-48405708 | Msa0504210:intron | 45.0% | |
| GGACCGTATACCTACGTATA+GGG | - | chr3_4:48406186-48406205 | None:intergenic | 45.0% | |
| CGACCATATATACGTAGAGC+AGG | + | chr3_4:48406218-48406237 | Msa0504210:intron | 45.0% | |
| TGCACCTGCCAATCACAATA+AGG | - | chr3_4:48406249-48406268 | None:intergenic | 45.0% | |
| TAAGTGCAAAACTTCGAGGG+GGG | - | chr3_4:48406805-48406824 | None:intergenic | 45.0% | |
| GTAAGTGCAAAACTTCGAGG+GGG | - | chr3_4:48406806-48406825 | None:intergenic | 45.0% | |
| CGTAAGTGCAAAACTTCGAG+GGG | - | chr3_4:48406807-48406826 | None:intergenic | 45.0% | |
| CACGTAAGTGCAAAACTTCG+AGG | - | chr3_4:48406809-48406828 | None:intergenic | 45.0% | |
| TTCCTTTGAATCCTAACGGG+GGG | + | chr3_4:48407170-48407189 | Msa0504210:intron | 45.0% | |
| !! | CTCTAGAATACTCACGTCTC+CGG | - | chr3_4:48407939-48407958 | None:intergenic | 45.0% |
| ! | TGTGTTTTCTTCTGCGTCGT+TGG | - | chr3_4:48408365-48408384 | None:intergenic | 45.0% |
| !! | AAGGTAATTGGTAGCGAGAG+CGG | - | chr3_4:48408413-48408432 | None:intergenic | 45.0% |
| CTGTTGAAAATGTCAGGTCG+TGG | + | chr3_4:48408506-48408525 | Msa0504210:intron | 45.0% | |
| GAAAATGTCAGGTCGTGGAA+AGG | + | chr3_4:48408511-48408530 | Msa0504210:intron | 45.0% | |
| TCTTCTTGCCAATCGACGAA+TGG | - | chr3_4:48408618-48408637 | None:intergenic | 45.0% | |
| ! | ATTCGTCGATTGGCAAGAAG+AGG | + | chr3_4:48408617-48408636 | Msa0504210:CDS | 45.0% |
| GAAGATCTTCAAGACACCTC+TGG | - | chr3_4:48408681-48408700 | None:intergenic | 45.0% | |
| TTACATACACTGAGCACGCT+AGG | + | chr3_4:48408726-48408745 | Msa0504210:CDS | 45.0% | |
| AGACAAGGAAGAACCCTCTA+TGG | + | chr3_4:48408791-48408810 | Msa0504210:CDS | 45.0% | |
| GGAAGAACCCTCTATGGTTT+CGG | + | chr3_4:48408797-48408816 | Msa0504210:CDS | 45.0% | |
| TCAACCTCCGAAACCATAGA+GGG | - | chr3_4:48408807-48408826 | None:intergenic | 45.0% | |
| !!! | ATTTTTATATTTTTTTCTAA+GGG | + | chr3_4:48404193-48404212 | Msa0504210:intron | 5.0% |
| !!! | TAAATTTTATATAAAATTAG+TGG | - | chr3_4:48404549-48404568 | None:intergenic | 5.0% |
| TGGAGCTCTTGTATCCACAG+AGG | - | chr3_4:48403756-48403775 | None:intergenic | 50.0% | |
| CTTGAGTTCGCCATAGTTGC+TGG | - | chr3_4:48403776-48403795 | None:intergenic | 50.0% | |
| !! | GGACGAATTTTGGGCTGGAT+TGG | + | chr3_4:48403952-48403971 | Msa0504210:CDS | 50.0% |
| !! | GTTGGTTGAAGCACTGTCGA+AGG | - | chr3_4:48403996-48404015 | None:intergenic | 50.0% |
| GATGAGAGAGAGAGAGAGAG+GGG | - | chr3_4:48405678-48405697 | None:intergenic | 50.0% | |
| GGGACCGTATACCTACGTAT+AGG | - | chr3_4:48406187-48406206 | None:intergenic | 50.0% | |
| AGGTGCAACTTGACAGATGG+AGG | + | chr3_4:48406262-48406281 | Msa0504210:intron | 50.0% | |
| GGTGCAACTTGACAGATGGA+GGG | + | chr3_4:48406263-48406282 | Msa0504210:intron | 50.0% | |
| AAGTGCAAAACTTCGAGGGG+GGG | - | chr3_4:48406804-48406823 | None:intergenic | 50.0% | |
| TTCCCCCCGTTAGGATTCAA+AGG | - | chr3_4:48407175-48407194 | None:intergenic | 50.0% | |
| GTACAGCCACACTTGTCAGA+TGG | - | chr3_4:48407443-48407462 | None:intergenic | 50.0% | |
| AAGTGCAAAACTTTCGGGGG+CGG | + | chr3_4:48407652-48407671 | Msa0504210:intron | 50.0% | |
| GAGAGCGGGATGAATAAGAG+GGG | - | chr3_4:48408398-48408417 | None:intergenic | 50.0% | |
| CGAGAGCGGGATGAATAAGA+GGG | - | chr3_4:48408399-48408418 | None:intergenic | 50.0% | |
| !! | AGGTAATTGGTAGCGAGAGC+GGG | - | chr3_4:48408412-48408431 | None:intergenic | 50.0% |
| ! | AGGGAGGTGCAAAGAGACAT+AGG | + | chr3_4:48408552-48408571 | Msa0504210:CDS | 50.0% |
| AAAGCCTGCCATTCGTCGAT+TGG | + | chr3_4:48408607-48408626 | Msa0504210:CDS | 50.0% | |
| ! | GGCGGTGTTAAGAGAATCAG+TGG | + | chr3_4:48408638-48408657 | Msa0504210:CDS | 50.0% |
| GACAACATCCATGGCAGTGA+CGG | - | chr3_4:48408759-48408778 | None:intergenic | 50.0% | |
| AGAACCCTCTATGGTTTCGG+AGG | + | chr3_4:48408800-48408819 | Msa0504210:CDS | 50.0% | |
| GCAACAAACTGGTGCCTCTG+TGG | + | chr3_4:48403739-48403758 | Msa0504210:CDS | 55.0% | |
| GGCCCAATAGCAACATGTGG+TGG | - | chr3_4:48403878-48403897 | None:intergenic | 55.0% | |
| TTGGTCGCAGTCATCCTCAC+AGG | + | chr3_4:48404855-48404874 | Msa0504210:intron | 55.0% | |
| ! | TTTTAATGTCGGGGGAGGGG+TGG | - | chr3_4:48405250-48405269 | None:intergenic | 55.0% |
| GGCAGGTGCAACTTGACAGA+TGG | + | chr3_4:48406259-48406278 | Msa0504210:intron | 55.0% | |
| AGTGCAAAACTTCGAGGGGG+GGG | - | chr3_4:48406803-48406822 | None:intergenic | 55.0% | |
| ATGGCTTTCTTCCCCCCGTT+AGG | - | chr3_4:48407184-48407203 | None:intergenic | 55.0% | |
| GCGAGAGCGGGATGAATAAG+AGG | - | chr3_4:48408400-48408419 | None:intergenic | 55.0% | |
| ATGTCAGGTCGTGGAAAGGG+AGG | + | chr3_4:48408515-48408534 | Msa0504210:intron | 55.0% | |
| AGGTCGTGGAAAGGGAGGTA+AGG | + | chr3_4:48408520-48408539 | Msa0504210:intron | 55.0% | |
| GGTCGTGGAAAGGGAGGTAA+GGG | + | chr3_4:48408521-48408540 | Msa0504210:intron | 55.0% | |
| GGAAAGGGAGGTAAGGGACT+CGG | + | chr3_4:48408527-48408546 | Msa0504210:CDS | 55.0% | |
| GGAGGTAAGGGACTCGGAAA+GGG | + | chr3_4:48408533-48408552 | Msa0504210:CDS | 55.0% | |
| ! | TGGCAGGCTTTGTGATACCC+TGG | - | chr3_4:48408598-48408617 | None:intergenic | 55.0% |
| CTTGCCAATCGACGAATGGC+AGG | - | chr3_4:48408614-48408633 | None:intergenic | 55.0% | |
| ! | CGTCGATTGGCAAGAAGAGG+CGG | + | chr3_4:48408620-48408639 | Msa0504210:CDS | 55.0% |
| CATACACTGAGCACGCTAGG+AGG | + | chr3_4:48408729-48408748 | Msa0504210:CDS | 55.0% | |
| ! | AGCGGCGGTGGTGGTAATGT+TGG | - | chr3_4:48403854-48403873 | None:intergenic | 60.0% |
| !! | GCAACATGTGGTGGTAGCGG+CGG | - | chr3_4:48403869-48403888 | None:intergenic | 60.0% |
| TGCAAAACTTCGAGGGGGGG+GGG | - | chr3_4:48406801-48406820 | None:intergenic | 60.0% | |
| GTGCAAAACTTCGAGGGGGG+GGG | - | chr3_4:48406802-48406821 | None:intergenic | 60.0% | |
| GGGAGGTAAGGGACTCGGAA+AGG | + | chr3_4:48408532-48408551 | Msa0504210:CDS | 60.0% | |
| GGTAAGGGACTCGGAAAGGG+AGG | + | chr3_4:48408536-48408555 | Msa0504210:CDS | 60.0% | |
| GAGGAAGACCGTCACTGCCA+TGG | + | chr3_4:48408748-48408767 | Msa0504210:CDS | 60.0% | |
| !! | ACATGTGGTGGTAGCGGCGG+TGG | - | chr3_4:48403866-48403885 | None:intergenic | 65.0% |
| GCAAAACTTCGAGGGGGGGG+GGG | - | chr3_4:48406800-48406819 | None:intergenic | 65.0% | |
| !! | TGTGGTGGTAGCGGCGGTGG+TGG | - | chr3_4:48403863-48403882 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 48403521 | 48408826 | 48403521 | ID=Msa0504210;Name=Msa0504210 |
| chr3_4 | mRNA | 48403521 | 48408826 | 48403521 | ID=Msa0504210-mRNA-1;Parent=Msa0504210;Name=Msa0504210-mRNA-1;_AED=0.17;_eAED=0.18;_QI=0|0|0|0.66|1|1|3|0|211 |
| chr3_4 | exon | 48403521 | 48403575 | 48403521 | ID=Msa0504210-mRNA-1:exon:10424;Parent=Msa0504210-mRNA-1 |
| chr3_4 | exon | 48403726 | 48404001 | 48403726 | ID=Msa0504210-mRNA-1:exon:10425;Parent=Msa0504210-mRNA-1 |
| chr3_4 | exon | 48408522 | 48408826 | 48408522 | ID=Msa0504210-mRNA-1:exon:10426;Parent=Msa0504210-mRNA-1 |
| chr3_4 | CDS | 48403521 | 48403575 | 48403521 | ID=Msa0504210-mRNA-1:cds;Parent=Msa0504210-mRNA-1 |
| chr3_4 | CDS | 48403726 | 48404001 | 48403726 | ID=Msa0504210-mRNA-1:cds;Parent=Msa0504210-mRNA-1 |
| chr3_4 | CDS | 48408522 | 48408826 | 48408522 | ID=Msa0504210-mRNA-1:cds;Parent=Msa0504210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
