Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0768710 | sp|Q6DJI4|RM41A_XENLA | 44.595 | 74 | 40 | 1 | 3 | 76 | 1 | 73 | 1.78e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0768710 | I3SQY2 | 98.913 | 92 | 0 | 1 | 1 | 91 | 1 | 92 | 3.63e-57 | 180 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0639670 | Msa0768710 | 0.800093 | 1.694337e-48 | -8.615850e-47 |
| Msa0768680 | Msa0768710 | 0.974517 | 2.693988e-138 | -8.615850e-47 |
| Msa0768710 | Msa0881210 | 0.839152 | 1.879537e-57 | -8.615850e-47 |
| Msa0768710 | Msa0998890 | 0.803688 | 3.093038e-49 | -8.615850e-47 |
| Msa0768710 | Msa1132630 | 0.804653 | 1.948069e-49 | -8.615850e-47 |
| Msa0768710 | Msa1257800 | 0.828715 | 7.705730e-55 | -8.615850e-47 |
| Msa0768710 | Msa1264860 | 0.837473 | 5.090479e-57 | -8.615850e-47 |
| Msa0768710 | Msa1463650 | 0.840767 | 7.131466e-58 | -8.615850e-47 |
| Msa0532810 | Msa0768710 | 0.825551 | 4.406463e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0768710 | MtrunA17_Chr5g0419731 | 98.913 | 92 | 0 | 1 | 1 | 91 | 1 | 92 | 6.99e-61 | 180 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0768710 | AT5G40080.1 | 76.404 | 89 | 21 | 0 | 4 | 92 | 6 | 94 | 1.61e-48 | 149 |
| Msa0768710 | AT5G39800.1 | 76.404 | 89 | 21 | 0 | 4 | 92 | 6 | 94 | 1.33e-42 | 134 |
| Msa0768710 | AT4G09012.1 | 77.551 | 49 | 11 | 0 | 1 | 49 | 75 | 123 | 4.76e-21 | 80.9 |
Find 57 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTCCAAACCACCAAATT+AGG | 0.137993 | 5_2:+35390001 | None:intergenic |
| GTATTCTAAACTACTGAATT+TGG | 0.198735 | 5_2:+35390181 | None:intergenic |
| AGCGCGGCGGCTGCGTTTCC+CGG | 0.206181 | 5_2:+35395241 | None:intergenic |
| CTCGGAGGTCTTCGCTTCTA+TGG | 0.237140 | 5_2:+35390225 | None:intergenic |
| TTATACAATTGCAATATTTC+CGG | 0.237506 | 5_2:+35395287 | None:intergenic |
| AAATCACCCCTCCCCTAATT+TGG | 0.269825 | 5_2:-35390014 | Msa0768710:three_prime_UTR |
| CCTCCCCTAATTTGGTGGTT+TGG | 0.284543 | 5_2:-35390006 | Msa0768710:three_prime_UTR |
| CATTCCAAACCACCAAATTA+GGG | 0.337320 | 5_2:+35390002 | None:intergenic |
| TTGTAACATGATGCATGATT+TGG | 0.354538 | 5_2:-35390074 | Msa0768710:three_prime_UTR |
| TGTGACAGTAAGATTATTCA+TGG | 0.377607 | 5_2:+35390135 | None:intergenic |
| AAACCTCGAGGAGCACGTTT+TGG | 0.384446 | 5_2:+35393261 | None:intergenic |
| TCGGAGGTCTTCGCTTCTAT+GGG | 0.390509 | 5_2:+35390226 | None:intergenic |
| CCTAATTTGGTGGTTTGGAA+TGG | 0.411161 | 5_2:-35390001 | Msa0768710:three_prime_UTR |
| CTTCGCTTCTATGGGGCATT+GGG | 0.411283 | 5_2:+35390234 | None:intergenic |
| GGGAAACGCAGCCGCCGCGC+TGG | 0.415231 | 5_2:-35395239 | Msa0768710:five_prime_UTR |
| TCTTCGCTTCTATGGGGCAT+TGG | 0.424619 | 5_2:+35390233 | None:intergenic |
| ATGGGGCATTGGGATACATA+TGG | 0.425726 | 5_2:+35390244 | None:intergenic |
| GTTGAGTTTCTTACAATTTG+TGG | 0.436027 | 5_2:+35395191 | None:intergenic |
| CAAATCAGGAACTACATAGT+TGG | 0.440803 | 5_2:+35391103 | None:intergenic |
| ACCTTAAAACCAGTCAAATC+AGG | 0.454783 | 5_2:+35391089 | None:intergenic |
| CATGCATCATGTTACAAATA+CGG | 0.458849 | 5_2:+35390080 | None:intergenic |
| CTCACAGAAGAAGATGCCTC+TGG | 0.465181 | 5_2:-35393349 | Msa0768710:intron |
| AAATCAGGAACTACATAGTT+GGG | 0.475474 | 5_2:+35391104 | None:intergenic |
| TCACCCCTCCCCTAATTTGG+TGG | 0.481329 | 5_2:-35390011 | Msa0768710:three_prime_UTR |
| TATGTAGTTCCTGATTTGAC+TGG | 0.484283 | 5_2:-35391098 | Msa0768710:CDS |
| ACTGGTTTCTTCACTCGCAA+AGG | 0.509036 | 5_2:-35393213 | Msa0768710:intron |
| CTCTACTAAGATAAACGTGT+TGG | 0.513635 | 5_2:+35389933 | None:intergenic |
| TCACAGAAGAAGATGCCTCT+GGG | 0.518503 | 5_2:-35393348 | Msa0768710:intron |
| TCTACTAAGATAAACGTGTT+GGG | 0.526053 | 5_2:+35389934 | None:intergenic |
| AGGTGGGTATGTGGTGGTGA+AGG | 0.533305 | 5_2:-35391135 | Msa0768710:CDS |
| TATTATTTCAGGTGGGTATG+TGG | 0.544556 | 5_2:-35391144 | Msa0768710:intron |
| TGTTGAACTTCGACGTATGT+CGG | 0.560696 | 5_2:+35389870 | None:intergenic |
| GACCTCCGAGGCTTCTCAAA+CGG | 0.560951 | 5_2:-35390212 | Msa0768710:CDS |
| TGATGATCTACTACGATGGT+GGG | 0.564375 | 5_2:+35395317 | None:intergenic |
| GGAAAGAACTGCAAGCCCAC+TGG | 0.564710 | 5_2:-35393231 | Msa0768710:CDS |
| GAAAGAATCAAACACTCGCC+GGG | 0.566923 | 5_2:-35395259 | Msa0768710:five_prime_UTR |
| TTTAGCCGTTTGAGAAGCCT+CGG | 0.569906 | 5_2:+35390207 | None:intergenic |
| AAACCACCAAATTAGGGGAG+GGG | 0.573340 | 5_2:+35390008 | None:intergenic |
| GTGATGATCTACTACGATGG+TGG | 0.573675 | 5_2:+35395316 | None:intergenic |
| AGAAAGAATCAAACACTCGC+CGG | 0.582802 | 5_2:-35395260 | Msa0768710:five_prime_UTR |
| CAAACCACCAAATTAGGGGA+GGG | 0.602794 | 5_2:+35390007 | None:intergenic |
| TATTTCAGGTGGGTATGTGG+TGG | 0.604476 | 5_2:-35391141 | Msa0768710:intron |
| AGTAGATCATCACAAGTCGC+CGG | 0.627253 | 5_2:-35395306 | Msa0768710:five_prime_UTR |
| CCAAACCACCAAATTAGGGG+AGG | 0.630136 | 5_2:+35390006 | None:intergenic |
| GAGTTTCTTACAATTTGTGG+CGG | 0.645385 | 5_2:+35395194 | None:intergenic |
| CACAGAAGAAGATGCCTCTG+GGG | 0.646490 | 5_2:-35393347 | Msa0768710:intron |
| CGGAGGTCTTCGCTTCTATG+GGG | 0.653982 | 5_2:+35390227 | None:intergenic |
| TTGCGAGTGAAGAAACCAGT+GGG | 0.657886 | 5_2:+35393216 | None:intergenic |
| GATGATCTACTACGATGGTG+GGG | 0.669208 | 5_2:+35395318 | None:intergenic |
| TCACCAAAACGTGCTCCTCG+AGG | 0.681691 | 5_2:-35393264 | Msa0768710:CDS |
| ATTCCAAACCACCAAATTAG+GGG | 0.683587 | 5_2:+35390003 | None:intergenic |
| CTTGTGATGATCTACTACGA+TGG | 0.688459 | 5_2:+35395313 | None:intergenic |
| AGCCGTTTGAGAAGCCTCGG+AGG | 0.691265 | 5_2:+35390210 | None:intergenic |
| ATTCCTAAAATTAGCCCCAG+AGG | 0.693872 | 5_2:+35393333 | None:intergenic |
| TTTGCGAGTGAAGAAACCAG+TGG | 0.715952 | 5_2:+35393215 | None:intergenic |
| CATAGAAGCGAAGACCTCCG+AGG | 0.750456 | 5_2:-35390224 | Msa0768710:CDS |
| GCTTCTCACGACGACCAGCG+CGG | 0.802268 | 5_2:+35395225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAATGTAAAAATACA+AGG | + | chr5_2:35390654-35390673 | None:intergenic | 10.0% |
| !! | ATATTTACTATGAAATAAAT+CGG | + | chr5_2:35391611-35391630 | None:intergenic | 10.0% |
| !!! | ATTTATCTTTTTTAAAAACT+TGG | - | chr5_2:35391631-35391650 | Msa0768710:intron | 10.0% |
| !!! | TTTATCTTTTTTAAAAACTT+GGG | - | chr5_2:35391632-35391651 | Msa0768710:intron | 10.0% |
| !!! | TTTGTTTTATTTTGTTATTT+TGG | - | chr5_2:35393434-35393453 | Msa0768710:intron | 10.0% |
| !!! | ATGTATTTTGTAATATTAAT+TGG | - | chr5_2:35394015-35394034 | Msa0768710:intron | 10.0% |
| !!! | TGTATTTTGTAATATTAATT+GGG | - | chr5_2:35394016-35394035 | Msa0768710:intron | 10.0% |
| !! | ATAAAAAGATAAAAATGATT+TGG | - | chr5_2:35394675-35394694 | Msa0768710:intron | 10.0% |
| !!! | TTATAATTCTGAAAATACAA+TGG | + | chr5_2:35391210-35391229 | None:intergenic | 15.0% |
| !!! | GATTTTTGAAATAAATTTGA+AGG | - | chr5_2:35391519-35391538 | Msa0768710:intron | 15.0% |
| !!! | TTTTTATTATGCATTATTAC+TGG | - | chr5_2:35391758-35391777 | Msa0768710:intron | 15.0% |
| !! | ACAATCTTAAAAATATGTAA+TGG | + | chr5_2:35392151-35392170 | None:intergenic | 15.0% |
| !!! | TTTATCTTTTTTACTTTTGT+TGG | + | chr5_2:35392255-35392274 | None:intergenic | 15.0% |
| !!! | AAAATAAGTAACTAAAGTTT+TGG | + | chr5_2:35392803-35392822 | None:intergenic | 15.0% |
| !!! | ATTATTATTAGTCCTTTTTT+GGG | - | chr5_2:35393360-35393379 | Msa0768710:intron | 15.0% |
| !! | AATTTACAAATCATTGAAAA+GGG | + | chr5_2:35393586-35393605 | None:intergenic | 15.0% |
| !! | AAATTTACAAATCATTGAAA+AGG | + | chr5_2:35393587-35393606 | None:intergenic | 15.0% |
| !!! | TTTTCAATGATTTGTAAATT+TGG | - | chr5_2:35393586-35393605 | Msa0768710:intron | 15.0% |
| !! | AATGTAAAACTATATTATCA+AGG | + | chr5_2:35394243-35394262 | None:intergenic | 15.0% |
| !!! | TGAACAATATAATTTCTTTT+AGG | - | chr5_2:35394586-35394605 | Msa0768710:intron | 15.0% |
| !! | TTATACAATTGCAATATTTC+CGG | + | chr5_2:35389912-35389931 | None:intergenic | 20.0% |
| !!! | TGCATTTGTTTTTGAAAAAA+TGG | - | chr5_2:35390212-35390231 | Msa0768710:CDS | 20.0% |
| !!! | AATCTCATTCATTTTTCTTT+TGG | - | chr5_2:35390545-35390564 | Msa0768710:intron | 20.0% |
| !! | TATATTTGAACTTTCTTTGA+AGG | - | chr5_2:35390940-35390959 | Msa0768710:intron | 20.0% |
| !! | GTATATCAATATTAATGAAG+TGG | - | chr5_2:35391003-35391022 | Msa0768710:intron | 20.0% |
| !! | TAATAGTATTTAACATGAGA+TGG | + | chr5_2:35391154-35391173 | None:intergenic | 20.0% |
| !! | ATAAATGACAAATCAGTATT+AGG | - | chr5_2:35391226-35391245 | Msa0768710:intron | 20.0% |
| !! | AAAATTCTATTGAGTACAAT+AGG | + | chr5_2:35391263-35391282 | None:intergenic | 20.0% |
| !!! | TGTACTCAATAGAATTTTAT+CGG | - | chr5_2:35391265-35391284 | Msa0768710:intron | 20.0% |
| !! | TCAATTTGACAAATATTTGA+GGG | + | chr5_2:35391331-35391350 | None:intergenic | 20.0% |
| !!! | GTATTGTTTCAATCTTTTAT+AGG | - | chr5_2:35391440-35391459 | Msa0768710:intron | 20.0% |
| !!! | TTTTATAGGAAAGTTTAGTA+TGG | - | chr5_2:35391454-35391473 | Msa0768710:intron | 20.0% |
| !!! | TATCTTTTTTTAGTAGTTTG+AGG | - | chr5_2:35392035-35392054 | Msa0768710:intron | 20.0% |
| !!! | TTTTAATTGTTGTAGTCATA+AGG | - | chr5_2:35392199-35392218 | Msa0768710:intron | 20.0% |
| !!! | TCTATTTTGTTTAGAAACTA+TGG | + | chr5_2:35392376-35392395 | None:intergenic | 20.0% |
| !!! | TATTTATCTAAAATGTTCAC+TGG | - | chr5_2:35392407-35392426 | Msa0768710:intron | 20.0% |
| !!! | TCAATAAAAGTACATTAATC+TGG | + | chr5_2:35392461-35392480 | None:intergenic | 20.0% |
| !!! | ACATAAGTAACTAAAGTTTT+TGG | + | chr5_2:35392584-35392603 | None:intergenic | 20.0% |
| !!! | TATTTTAATGCAAACATAAG+AGG | - | chr5_2:35392731-35392750 | Msa0768710:intron | 20.0% |
| !!! | ATTTGGCTATAATTTTCATT+GGG | - | chr5_2:35393170-35393189 | Msa0768710:intron | 20.0% |
| !!! | GATTATTATTAGTCCTTTTT+TGG | - | chr5_2:35393359-35393378 | Msa0768710:intron | 20.0% |
| !!! | ATCTTAAATTTTCCCAAAAA+AGG | + | chr5_2:35393375-35393394 | None:intergenic | 20.0% |
| !!! | TTTTGGGAAAATTTAAGATT+TGG | - | chr5_2:35393376-35393395 | Msa0768710:intron | 20.0% |
| !! | ATTTACAAATCATTGAAAAG+GGG | + | chr5_2:35393585-35393604 | None:intergenic | 20.0% |
| !! | AAACACTAGAATCATTATTT+AGG | - | chr5_2:35393878-35393897 | Msa0768710:intron | 20.0% |
| !! | TAAAACTATATTATCAAGGA+AGG | + | chr5_2:35394239-35394258 | None:intergenic | 20.0% |
| !!! | AATTTCTTTTAGGAATGATT+CGG | - | chr5_2:35394596-35394615 | Msa0768710:intron | 20.0% |
| !!! | TAAAAATGATTTGGTGTATT+TGG | - | chr5_2:35394684-35394703 | Msa0768710:intron | 20.0% |
| ! | AAAGTAAACAAAGACAAAGA+AGG | + | chr5_2:35390032-35390051 | None:intergenic | 25.0% |
| !! | AATTGTAAGTAAAGTTGGTT+TGG | - | chr5_2:35390272-35390291 | Msa0768710:intron | 25.0% |
| !! | TTGATAGCTATTGACTATTA+TGG | + | chr5_2:35390301-35390320 | None:intergenic | 25.0% |
| ! | AAATCTGTGATACTGTAATA+GGG | - | chr5_2:35390319-35390338 | Msa0768710:intron | 25.0% |
| ! | ATAAAATGACCTATAATGTG+TGG | - | chr5_2:35390668-35390687 | Msa0768710:intron | 25.0% |
| ! | TGCTTAATAATATTTGCAGT+AGG | - | chr5_2:35390809-35390828 | Msa0768710:intron | 25.0% |
| ! | AAAATGATCTTCATTTCCAT+CGG | - | chr5_2:35390981-35391000 | Msa0768710:intron | 25.0% |
| ! | CATTAATATTGATATACCGA+TGG | + | chr5_2:35391000-35391019 | None:intergenic | 25.0% |
| ! | CAATATTAATGAAGTGGTAA+CGG | - | chr5_2:35391009-35391028 | Msa0768710:intron | 25.0% |
| ! | AAATACAATGGTCAACTATA+CGG | + | chr5_2:35391198-35391217 | None:intergenic | 25.0% |
| ! | ACAAATCAGTATTAGGAATA+TGG | - | chr5_2:35391233-35391252 | Msa0768710:intron | 25.0% |
| ! | CAGTATCTTCAGAAAAAAAT+AGG | + | chr5_2:35391291-35391310 | None:intergenic | 25.0% |
| !!! | TTTTCTGAAGATACTGTAAT+AGG | - | chr5_2:35391295-35391314 | Msa0768710:intron | 25.0% |
| ! | GTCAATTTGACAAATATTTG+AGG | + | chr5_2:35391332-35391351 | None:intergenic | 25.0% |
| ! | TTGAAGGAAATAAGTGTAAA+CGG | - | chr5_2:35391535-35391554 | Msa0768710:intron | 25.0% |
| !!! | CAAAGGTTTGTTTTCTTTAA+TGG | - | chr5_2:35392000-35392019 | Msa0768710:intron | 25.0% |
| !!! | TTTTTAAGATTGTTGAGATC+TGG | - | chr5_2:35392158-35392177 | Msa0768710:intron | 25.0% |
| !!! | GAAAACTCTAAAATTCTTAG+TGG | - | chr5_2:35392281-35392300 | Msa0768710:intron | 25.0% |
| !!! | TAAGTAACTAAAGTTTTTGG+AGG | + | chr5_2:35392581-35392600 | None:intergenic | 25.0% |
| !! | GAATATTAGCCTAGTTATTT+AGG | + | chr5_2:35392757-35392776 | None:intergenic | 25.0% |
| ! | AAATACAATCTGAATGTACT+TGG | - | chr5_2:35392836-35392855 | Msa0768710:intron | 25.0% |
| ! | TAGATATTTCATACACTGAA+AGG | - | chr5_2:35392949-35392968 | Msa0768710:intron | 25.0% |
| ! | GTAATGAGATAAATCATTCT+AGG | - | chr5_2:35392997-35393016 | Msa0768710:intron | 25.0% |
| ! | AATGGAAAATCACTTCTTAA+AGG | + | chr5_2:35393137-35393156 | None:intergenic | 25.0% |
| !! | TTTAAGAAGTGATTTTCCAT+TGG | - | chr5_2:35393136-35393155 | Msa0768710:intron | 25.0% |
| !! | GATTTGGCTATAATTTTCAT+TGG | - | chr5_2:35393169-35393188 | Msa0768710:intron | 25.0% |
| ! | AGAACAATTCTTACATATGA+TGG | - | chr5_2:35393238-35393257 | Msa0768710:CDS | 25.0% |
| !!! | CATTTCATGTTTTAGTTTCA+TGG | + | chr5_2:35393322-35393341 | None:intergenic | 25.0% |
| ! | AACATGAAATGTTAACACTT+TGG | - | chr5_2:35393331-35393350 | Msa0768710:CDS | 25.0% |
| !!! | TGGACTGTTGATTTAAATAA+AGG | - | chr5_2:35393454-35393473 | Msa0768710:intron | 25.0% |
| !!! | ACTGTTGATTTAAATAAAGG+TGG | - | chr5_2:35393457-35393476 | Msa0768710:intron | 25.0% |
| ! | ACATTAAGTAACCCTAAATT+AGG | - | chr5_2:35393486-35393505 | Msa0768710:intron | 25.0% |
| ! | CATTAAGTAACCCTAAATTA+GGG | - | chr5_2:35393487-35393506 | Msa0768710:intron | 25.0% |
| !!! | TAGTTGATTTTGACTTATGA+GGG | - | chr5_2:35393673-35393692 | Msa0768710:intron | 25.0% |
| !! | CTATGTTAAACTTTAGAAAG+TGG | - | chr5_2:35393786-35393805 | Msa0768710:intron | 25.0% |
| ! | AAGCAGCAAAAATTATTACA+AGG | + | chr5_2:35393816-35393835 | None:intergenic | 25.0% |
| !! | TTATGGTGTCAAAATTTACA+TGG | - | chr5_2:35394188-35394207 | Msa0768710:intron | 25.0% |
| !! | TATGGTGTCAAAATTTACAT+GGG | - | chr5_2:35394189-35394208 | Msa0768710:intron | 25.0% |
| !!! | ACTTTGTTTTAGCTCATTTA+TGG | - | chr5_2:35394299-35394318 | Msa0768710:intron | 25.0% |
| ! | TGCAATGAAACAAAATAACA+TGG | + | chr5_2:35394395-35394414 | None:intergenic | 25.0% |
| !!! | ATTTCTTTTAGGAATGATTC+GGG | - | chr5_2:35394597-35394616 | Msa0768710:intron | 25.0% |
| !!! | TTTTTTGAGTTCTTCCATAT+AGG | - | chr5_2:35394734-35394753 | Msa0768710:intron | 25.0% |
| ! | AAAACTAAAACTCTCCTATA+TGG | + | chr5_2:35394751-35394770 | None:intergenic | 25.0% |
| !!! | ATAGGAGAGTTTTAGTTTTA+TGG | - | chr5_2:35394752-35394771 | Msa0768710:intron | 25.0% |
| ! | AATCTTATTGTTTGAGAGTT+AGG | + | chr5_2:35394859-35394878 | None:intergenic | 25.0% |
| ! | GTATTCTAAACTACTGAATT+TGG | + | chr5_2:35395018-35395037 | None:intergenic | 25.0% |
| GTTGAGTTTCTTACAATTTG+TGG | + | chr5_2:35390008-35390027 | None:intergenic | 30.0% | |
| TCATGACACAAAATAGTGAA+GGG | + | chr5_2:35390069-35390088 | None:intergenic | 30.0% | |
| TTCATGACACAAAATAGTGA+AGG | + | chr5_2:35390070-35390089 | None:intergenic | 30.0% | |
| !! | GTTCAAATCTTTGAGATTGA+AGG | - | chr5_2:35390150-35390169 | Msa0768710:three_prime_UTR | 30.0% |
| CAAATCTGTGATACTGTAAT+AGG | - | chr5_2:35390318-35390337 | Msa0768710:intron | 30.0% | |
| AATCTGTGATACTGTAATAG+GGG | - | chr5_2:35390320-35390339 | Msa0768710:intron | 30.0% | |
| ACACAATCAACAGAATCATT+TGG | + | chr5_2:35390614-35390633 | None:intergenic | 30.0% | |
| GCTAAAATTAACGTTCAAAG+AGG | + | chr5_2:35390861-35390880 | None:intergenic | 30.0% | |
| CAGATCTAGACATTTGATAT+TGG | + | chr5_2:35390888-35390907 | None:intergenic | 30.0% | |
| GTACAGATCAAACATAACAA+CGG | + | chr5_2:35391114-35391133 | None:intergenic | 30.0% | |
| GATGGTAACATACATAAACA+TGG | + | chr5_2:35391136-35391155 | None:intergenic | 30.0% | |
| TTTGACAAATATTTGAGGGA+GGG | + | chr5_2:35391327-35391346 | None:intergenic | 30.0% | |
| ATTTGACAAATATTTGAGGG+AGG | + | chr5_2:35391328-35391347 | None:intergenic | 30.0% | |
| ! | GTGAGACTTTTTGAATTGTT+AGG | - | chr5_2:35391370-35391389 | Msa0768710:intron | 30.0% |
| ! | TGCAGATTATGTTATTTGAC+TGG | - | chr5_2:35391790-35391809 | Msa0768710:intron | 30.0% |
| TAATGGAATCAAGTAATCGA+TGG | + | chr5_2:35392134-35392153 | None:intergenic | 30.0% | |
| AAGTACATTAATCTGGAGAA+TGG | + | chr5_2:35392454-35392473 | None:intergenic | 30.0% | |
| GTTTCCTATGAATATCTTTG+AGG | - | chr5_2:35392509-35392528 | Msa0768710:intron | 30.0% | |
| GATTCCTCAAAGATATTCAT+AGG | + | chr5_2:35392516-35392535 | None:intergenic | 30.0% | |
| !! | CTAAAGTTTTTGGAGGATTT+TGG | + | chr5_2:35392574-35392593 | None:intergenic | 30.0% |
| AGATATAACCTGAATGTACT+TGG | + | chr5_2:35392709-35392728 | None:intergenic | 30.0% | |
| !! | CGATTTTGGAGATAATGTTA+CGG | + | chr5_2:35392779-35392798 | None:intergenic | 30.0% |
| !!! | ACTAAAGTTTTGGACGATTT+TGG | + | chr5_2:35392793-35392812 | None:intergenic | 30.0% |
| AGGCATAACTTACAATGTTT+AGG | - | chr5_2:35392969-35392988 | Msa0768710:intron | 30.0% | |
| GCATAATCGAATTCTTGTAT+AGG | - | chr5_2:35393205-35393224 | Msa0768710:intron | 30.0% | |
| GCATATTACTCCCTAATTTA+GGG | + | chr5_2:35393500-35393519 | None:intergenic | 30.0% | |
| AGCATATTACTCCCTAATTT+AGG | + | chr5_2:35393501-35393520 | None:intergenic | 30.0% | |
| AAATTAGGGAGTAATATGCT+AGG | - | chr5_2:35393501-35393520 | Msa0768710:intron | 30.0% | |
| ! | CAATGATTTGTAAATTTGGC+TGG | - | chr5_2:35393590-35393609 | Msa0768710:intron | 30.0% |
| !!! | TAGTTGATTTTGACTTACGA+GGG | - | chr5_2:35393630-35393649 | Msa0768710:intron | 30.0% |
| !!! | CTAGTTGATTTTGACTTATG+AGG | - | chr5_2:35393672-35393691 | Msa0768710:intron | 30.0% |
| TGTTTCGCTTTATCTTTATG+AGG | - | chr5_2:35393713-35393732 | Msa0768710:intron | 30.0% | |
| GTTTCGCTTTATCTTTATGA+GGG | - | chr5_2:35393714-35393733 | Msa0768710:intron | 30.0% | |
| GAAGACACATTTACTAACTA+TGG | + | chr5_2:35393855-35393874 | None:intergenic | 30.0% | |
| !! | AACCATGAAAAGCACATTTT+AGG | - | chr5_2:35393948-35393967 | Msa0768710:intron | 30.0% |
| ! | TACCTAAAATGTGCTTTTCA+TGG | + | chr5_2:35393953-35393972 | None:intergenic | 30.0% |
| AAATCAGGAACTACATAGTT+GGG | + | chr5_2:35394095-35394114 | None:intergenic | 30.0% | |
| CTATTTCCTCTGTCAAAATA+AGG | + | chr5_2:35394347-35394366 | None:intergenic | 30.0% | |
| ! | TATTGTTTGAGGCAAAGAAA+GGG | - | chr5_2:35394534-35394553 | Msa0768710:intron | 30.0% |
| !! | TTTCTTTTAGGAATGATTCG+GGG | - | chr5_2:35394598-35394617 | Msa0768710:intron | 30.0% |
| !! | CTGAAGAGTTTTATAAGACT+TGG | + | chr5_2:35394710-35394729 | None:intergenic | 30.0% |
| TTTGAGAGTTAGGATGTAAA+GGG | + | chr5_2:35394849-35394868 | None:intergenic | 30.0% | |
| TGTGACAGTAAGATTATTCA+TGG | + | chr5_2:35395064-35395083 | None:intergenic | 30.0% | |
| CATGCATCATGTTACAAATA+CGG | + | chr5_2:35395119-35395138 | None:intergenic | 30.0% | |
| TTGTAACATGATGCATGATT+TGG | - | chr5_2:35395122-35395141 | Msa0768710:intron | 30.0% | |
| TCTACTAAGATAAACGTGTT+GGG | + | chr5_2:35395265-35395284 | None:intergenic | 30.0% | |
| GAGTTTCTTACAATTTGTGG+CGG | + | chr5_2:35390005-35390024 | None:intergenic | 35.0% | |
| ATTTGAACTTAGAAGCTAGC+TGG | + | chr5_2:35390138-35390157 | None:intergenic | 35.0% | |
| GCGAGAATTGTAAGTAAAGT+TGG | - | chr5_2:35390267-35390286 | Msa0768710:intron | 35.0% | |
| ATGAATCTCAACCCTATAAG+AGG | - | chr5_2:35390427-35390446 | Msa0768710:intron | 35.0% | |
| TGAATCTCAACCCTATAAGA+GGG | - | chr5_2:35390428-35390447 | Msa0768710:intron | 35.0% | |
| AACCCTATAAGAGGGAAAAT+AGG | - | chr5_2:35390436-35390455 | Msa0768710:intron | 35.0% | |
| ACCCTATAAGAGGGAAAATA+GGG | - | chr5_2:35390437-35390456 | Msa0768710:intron | 35.0% | |
| ! | TCCCTATTTTCCCTCTTATA+GGG | + | chr5_2:35390441-35390460 | None:intergenic | 35.0% |
| ! | ATCCCTATTTTCCCTCTTAT+AGG | + | chr5_2:35390442-35390461 | None:intergenic | 35.0% |
| GAGGGAAAATAGGGATATAT+TGG | - | chr5_2:35390446-35390465 | Msa0768710:intron | 35.0% | |
| ! | TTCCCATGTCTTTGCTATAT+AGG | - | chr5_2:35390587-35390606 | Msa0768710:intron | 35.0% |
| ! | TCCCATGTCTTTGCTATATA+GGG | - | chr5_2:35390588-35390607 | Msa0768710:intron | 35.0% |
| ! | ATGATTCTGTTGATTGTGTG+TGG | - | chr5_2:35390615-35390634 | Msa0768710:intron | 35.0% |
| ACCTATAATGTGTGGTTTGA+AGG | - | chr5_2:35390676-35390695 | Msa0768710:intron | 35.0% | |
| ACCTTCAAACCACACATTAT+AGG | + | chr5_2:35390680-35390699 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTGCCCTCCATTCA+CGG | - | chr5_2:35390772-35390791 | Msa0768710:intron | 35.0% |
| TAACGTTCAAAGAGGAATGA+GGG | + | chr5_2:35390853-35390872 | None:intergenic | 35.0% | |
| TTAACGTTCAAAGAGGAATG+AGG | + | chr5_2:35390854-35390873 | None:intergenic | 35.0% | |
| CTAGACATTTGATATTGGTG+TGG | + | chr5_2:35390883-35390902 | None:intergenic | 35.0% | |
| TGTAATTGAGTTATACCCTC+AGG | + | chr5_2:35390917-35390936 | None:intergenic | 35.0% | |
| AGACATGATGCAAATTGGAA+TGG | + | chr5_2:35391401-35391420 | None:intergenic | 35.0% | |
| AAAGCAGACATGATGCAAAT+TGG | + | chr5_2:35391406-35391425 | None:intergenic | 35.0% | |
| AGCCTATAGACCAATTCAAT+GGG | + | chr5_2:35391586-35391605 | None:intergenic | 35.0% | |
| AAAAACTTGGGTCTATAAGC+CGG | - | chr5_2:35391644-35391663 | Msa0768710:intron | 35.0% | |
| TCCAAAAACAATGTGGACAA+GGG | + | chr5_2:35391670-35391689 | None:intergenic | 35.0% | |
| CTCATAGTCCAAAAACAATG+TGG | + | chr5_2:35391677-35391696 | None:intergenic | 35.0% | |
| ! | TTGGACTATGAGCTTTTCTA+TGG | - | chr5_2:35391685-35391704 | Msa0768710:intron | 35.0% |
| ! | TGGACTATGAGCTTTTCTAT+GGG | - | chr5_2:35391686-35391705 | Msa0768710:intron | 35.0% |
| TTTCTATGGGTGAACTTTCT+TGG | - | chr5_2:35391699-35391718 | Msa0768710:intron | 35.0% | |
| !! | TGGGGCTAATTTTAGGAATT+GGG | - | chr5_2:35391867-35391886 | Msa0768710:intron | 35.0% |
| !! | GCTAATTTTAGGAATTGGGA+GGG | - | chr5_2:35391871-35391890 | Msa0768710:intron | 35.0% |
| ! | GTTTTCTTTAATGGAAGTCG+TGG | - | chr5_2:35392009-35392028 | Msa0768710:intron | 35.0% |
| CAGAGATAGTGATAAAATGC+TGG | + | chr5_2:35392102-35392121 | None:intergenic | 35.0% | |
| ! | CAGCATTTTATCACTATCTC+TGG | - | chr5_2:35392100-35392119 | Msa0768710:intron | 35.0% |
| TTGTTGTAGTCATAAGGTTG+AGG | - | chr5_2:35392205-35392224 | Msa0768710:intron | 35.0% | |
| TGTTGTAGTCATAAGGTTGA+GGG | - | chr5_2:35392206-35392225 | Msa0768710:intron | 35.0% | |
| ! | ATCTAAAATGTTCACTGGAG+AGG | - | chr5_2:35392412-35392431 | Msa0768710:intron | 35.0% |
| TTGAGGAATCAGCAATTGTT+AGG | - | chr5_2:35392526-35392545 | Msa0768710:intron | 35.0% | |
| TTTACTACTCAAGCTGATGA+TGG | + | chr5_2:35392872-35392891 | None:intergenic | 35.0% | |
| GCAAATAACCAAGTACATTC+AGG | - | chr5_2:35392698-35392717 | Msa0768710:intron | 35.0% | |
| CATAAGAGGCCTAAATAACT+AGG | - | chr5_2:35392745-35392764 | Msa0768710:intron | 35.0% | |
| TTTACTACTCAAGCTGATGA+TGG | - | chr5_2:35392872-35392891 | Msa0768710:intron | 35.0% | |
| CAAATCAGCTTAATGACCAA+TGG | + | chr5_2:35393155-35393174 | None:intergenic | 35.0% | |
| CATTGGTCATTAAGCTGATT+TGG | - | chr5_2:35393153-35393172 | Msa0768710:intron | 35.0% | |
| TGCATTACATATCACGTGAA+AGG | - | chr5_2:35393276-35393295 | Msa0768710:CDS | 35.0% | |
| !!! | GTTTAAAAGCCTTTTAGCTC+TGG | + | chr5_2:35393563-35393582 | None:intergenic | 35.0% |
| !!! | CTAGTTGATTTTGACTTACG+AGG | - | chr5_2:35393629-35393648 | Msa0768710:intron | 35.0% |
| AGATAAAGCGAAACACAAGT+AGG | + | chr5_2:35393708-35393727 | None:intergenic | 35.0% | |
| CAACAAAACCCAGAATAGAA+AGG | + | chr5_2:35393748-35393767 | None:intergenic | 35.0% | |
| GTAATCCTGCGTATTATTTC+AGG | - | chr5_2:35394041-35394060 | Msa0768710:intron | 35.0% | |
| ! | TATTATTTCAGGTGGGTATG+TGG | - | chr5_2:35394052-35394071 | Msa0768710:intron | 35.0% |
| CAAATCAGGAACTACATAGT+TGG | + | chr5_2:35394096-35394115 | None:intergenic | 35.0% | |
| ! | TATGTAGTTCCTGATTTGAC+TGG | - | chr5_2:35394098-35394117 | Msa0768710:intron | 35.0% |
| !!! | TCCTGATTTGACTGGTTTTA+AGG | - | chr5_2:35394106-35394125 | Msa0768710:intron | 35.0% |
| ACCTTAAAACCAGTCAAATC+AGG | + | chr5_2:35394110-35394129 | None:intergenic | 35.0% | |
| TAGTCATACGATTAGATGAG+TGG | + | chr5_2:35394142-35394161 | None:intergenic | 35.0% | |
| AAACACGTAGAAAGAAGACA+AGG | + | chr5_2:35394170-35394189 | None:intergenic | 35.0% | |
| GTCTTCTTTCTACGTGTTTA+TGG | - | chr5_2:35394171-35394190 | Msa0768710:intron | 35.0% | |
| AAATTTACATGGGTAGCCAT+TGG | - | chr5_2:35394199-35394218 | Msa0768710:intron | 35.0% | |
| AAGTTAGAGTTCACACAAGA+GGG | + | chr5_2:35394283-35394302 | None:intergenic | 35.0% | |
| AAAGTTAGAGTTCACACAAG+AGG | + | chr5_2:35394284-35394303 | None:intergenic | 35.0% | |
| !!! | TAGCTTCCTTATTTTGACAG+AGG | - | chr5_2:35394338-35394357 | Msa0768710:intron | 35.0% |
| ATGGTGAGAAATGAACATCT+AGG | + | chr5_2:35394376-35394395 | None:intergenic | 35.0% | |
| CTTTCTTTGCCTCAAACAAT+AGG | + | chr5_2:35394535-35394554 | None:intergenic | 35.0% | |
| ! | CTATTGTTTGAGGCAAAGAA+AGG | - | chr5_2:35394533-35394552 | Msa0768710:intron | 35.0% |
| GTTGAGAAATTCTGTGAGTT+TGG | - | chr5_2:35394620-35394639 | Msa0768710:intron | 35.0% | |
| AGAAATTCTGTGAGTTTGGA+GGG | - | chr5_2:35394624-35394643 | Msa0768710:intron | 35.0% | |
| AAAATAAACTCTCGCTCACA+AGG | - | chr5_2:35394778-35394797 | Msa0768710:intron | 35.0% | |
| GTTTGAGAGTTAGGATGTAA+AGG | + | chr5_2:35394850-35394869 | None:intergenic | 35.0% | |
| ATTCCAAACCACCAAATTAG+GGG | + | chr5_2:35395196-35395215 | None:intergenic | 35.0% | |
| CATTCCAAACCACCAAATTA+GGG | + | chr5_2:35395197-35395216 | None:intergenic | 35.0% | |
| CTCTACTAAGATAAACGTGT+TGG | + | chr5_2:35395266-35395285 | None:intergenic | 35.0% | |
| TGATGATCTACTACGATGGT+GGG | + | chr5_2:35389882-35389901 | None:intergenic | 40.0% | |
| CTTGTGATGATCTACTACGA+TGG | + | chr5_2:35389886-35389905 | None:intergenic | 40.0% | |
| AGAAAGAATCAAACACTCGC+CGG | - | chr5_2:35389936-35389955 | Msa0768710:three_prime_UTR | 40.0% | |
| GACACAAAATAGTGAAGGGA+AGG | + | chr5_2:35390065-35390084 | None:intergenic | 40.0% | |
| GCCCTATATAGCAAAGACAT+GGG | + | chr5_2:35390592-35390611 | None:intergenic | 40.0% | |
| ! | ATTCTGTTGATTGTGTGTGG+TGG | - | chr5_2:35390618-35390637 | Msa0768710:intron | 40.0% |
| ! | AAGCCTGGTAGGAGTTTTTA+TGG | - | chr5_2:35390701-35390720 | Msa0768710:intron | 40.0% |
| ! | AGCCTGGTAGGAGTTTTTAT+GGG | - | chr5_2:35390702-35390721 | Msa0768710:intron | 40.0% |
| AACGTTCAAAGAGGAATGAG+GGG | + | chr5_2:35390852-35390871 | None:intergenic | 40.0% | |
| !! | AAGTGGTAACGGAGAATATG+AGG | - | chr5_2:35391020-35391039 | Msa0768710:intron | 40.0% |
| !! | AGTGGTAACGGAGAATATGA+GGG | - | chr5_2:35391021-35391040 | Msa0768710:intron | 40.0% |
| GGCTCATAGAGATTTAGTAC+AGG | - | chr5_2:35391047-35391066 | Msa0768710:intron | 40.0% | |
| CAGATCAAACATAACAACGG+AGG | + | chr5_2:35391111-35391130 | None:intergenic | 40.0% | |
| ! | AGCCCATTGAATTGGTCTAT+AGG | - | chr5_2:35391581-35391600 | Msa0768710:intron | 40.0% |
| CAGCCTATAGACCAATTCAA+TGG | + | chr5_2:35391587-35391606 | None:intergenic | 40.0% | |
| ! | CATTGAATTGGTCTATAGGC+TGG | - | chr5_2:35391585-35391604 | Msa0768710:intron | 40.0% |
| GTCCAAAAACAATGTGGACA+AGG | + | chr5_2:35391671-35391690 | None:intergenic | 40.0% | |
| ATTCCTAAAATTAGCCCCAG+AGG | + | chr5_2:35391866-35391885 | None:intergenic | 40.0% | |
| !! | CTGGGGCTAATTTTAGGAAT+TGG | - | chr5_2:35391866-35391885 | Msa0768710:intron | 40.0% |
| !! | GGCTAATTTTAGGAATTGGG+AGG | - | chr5_2:35391870-35391889 | Msa0768710:intron | 40.0% |
| TTTCCCTTGTAAAAACCTCG+AGG | + | chr5_2:35391950-35391969 | None:intergenic | 40.0% | |
| GTTGTAGTCATAAGGTTGAG+GGG | - | chr5_2:35392207-35392226 | Msa0768710:intron | 40.0% | |
| TGTAATCATCGAAATCCCCA+AGG | - | chr5_2:35392314-35392333 | Msa0768710:intron | 40.0% | |
| GCTAGGTCAACAAATTAGAG+TGG | - | chr5_2:35393518-35393537 | Msa0768710:intron | 40.0% | |
| ! | CAAATTAGAGTGGAAAGCAC+TGG | - | chr5_2:35393528-35393547 | Msa0768710:intron | 40.0% |
| CTGGTAGTCCTTTCTATTCT+GGG | - | chr5_2:35393737-35393756 | Msa0768710:intron | 40.0% | |
| !! | TTTTGCTGCTTCTCATGTTC+TGG | - | chr5_2:35393825-35393844 | Msa0768710:intron | 40.0% |
| ATCCTGCGTATTATTTCAGG+TGG | - | chr5_2:35394044-35394063 | Msa0768710:intron | 40.0% | |
| ! | TCCTGCGTATTATTTCAGGT+GGG | - | chr5_2:35394045-35394064 | Msa0768710:intron | 40.0% |
| GGAGAAGAACTGAATACCAA+TGG | + | chr5_2:35394218-35394237 | None:intergenic | 40.0% | |
| ACAAGAGGGAGAGCAATTAA+AGG | + | chr5_2:35394269-35394288 | None:intergenic | 40.0% | |
| GTGCTTGTATTTGCTTCTGT+AGG | - | chr5_2:35394442-35394461 | Msa0768710:intron | 40.0% | |
| ACAATAGGATACTGCAGCTA+AGG | + | chr5_2:35394520-35394539 | None:intergenic | 40.0% | |
| CTGCAGTATCCTATTGTTTG+AGG | - | chr5_2:35394523-35394542 | Msa0768710:intron | 40.0% | |
| GAGAAATTCTGTGAGTTTGG+AGG | - | chr5_2:35394623-35394642 | Msa0768710:intron | 40.0% | |
| ! | GATGGAGAGAAAAGGGTTTT+GGG | - | chr5_2:35394646-35394665 | Msa0768710:intron | 40.0% |
| GGAAGGATTTGGGAGTAAAA+GGG | + | chr5_2:35394828-35394847 | None:intergenic | 40.0% | |
| GGATGTAAAGGGAAGGATTT+GGG | + | chr5_2:35394838-35394857 | None:intergenic | 40.0% | |
| AGGATGTAAAGGGAAGGATT+TGG | + | chr5_2:35394839-35394858 | None:intergenic | 40.0% | |
| AGAGTTAGGATGTAAAGGGA+AGG | + | chr5_2:35394845-35394864 | None:intergenic | 40.0% | |
| CCATTCCAAACCACCAAATT+AGG | + | chr5_2:35395198-35395217 | None:intergenic | 40.0% | |
| ! | CCTAATTTGGTGGTTTGGAA+TGG | - | chr5_2:35395195-35395214 | Msa0768710:intron | 40.0% |
| GATGATCTACTACGATGGTG+GGG | + | chr5_2:35389881-35389900 | None:intergenic | 45.0% | |
| GTGATGATCTACTACGATGG+TGG | + | chr5_2:35389883-35389902 | None:intergenic | 45.0% | |
| AGTAGATCATCACAAGTCGC+CGG | - | chr5_2:35389890-35389909 | Msa0768710:three_prime_UTR | 45.0% | |
| GAAAGAATCAAACACTCGCC+GGG | - | chr5_2:35389937-35389956 | Msa0768710:three_prime_UTR | 45.0% | |
| AGCTGGAAAATGCAGTCTCA+TGG | + | chr5_2:35390121-35390140 | None:intergenic | 45.0% | |
| GGCCCTATATAGCAAAGACA+TGG | + | chr5_2:35390593-35390612 | None:intergenic | 45.0% | |
| TGTGGTTTGAAGGTTAAGCC+TGG | - | chr5_2:35390686-35390705 | Msa0768710:intron | 45.0% | |
| GTTTGAAGGTTAAGCCTGGT+AGG | - | chr5_2:35390690-35390709 | Msa0768710:intron | 45.0% | |
| !!! | GTGTCTTGTTTTAGCGCTAC+TGG | - | chr5_2:35390726-35390745 | Msa0768710:intron | 45.0% |
| AAACACAAGCCGTGAATGGA+GGG | + | chr5_2:35390784-35390803 | None:intergenic | 45.0% | |
| TTCAAAGAGGAATGAGGGGT+GGG | + | chr5_2:35390848-35390867 | None:intergenic | 45.0% | |
| TTGAGTTATACCCTCAGGCA+GGG | + | chr5_2:35390912-35390931 | None:intergenic | 45.0% | |
| ATTGAGTTATACCCTCAGGC+AGG | + | chr5_2:35390913-35390932 | None:intergenic | 45.0% | |
| TAACGGAGAATATGAGGGCA+GGG | - | chr5_2:35391026-35391045 | Msa0768710:intron | 45.0% | |
| TGTGAGCTAGCCCATTGAAT+TGG | - | chr5_2:35391573-35391592 | Msa0768710:intron | 45.0% | |
| AAAACAATGTGGACAAGGGC+CGG | + | chr5_2:35391666-35391685 | None:intergenic | 45.0% | |
| ! | GCCCTTGTCCACATTGTTTT+TGG | - | chr5_2:35391666-35391685 | Msa0768710:intron | 45.0% |
| TATTTGACTGGCATCGCTGA+TGG | - | chr5_2:35391802-35391821 | Msa0768710:intron | 45.0% | |
| TCACAGAAGAAGATGCCTCT+GGG | - | chr5_2:35391848-35391867 | Msa0768710:intron | 45.0% | |
| !!! | ATGCCTCTGGGGCTAATTTT+AGG | - | chr5_2:35391860-35391879 | Msa0768710:intron | 45.0% |
| ! | TGCTCCTCGAGGTTTTTACA+AGG | - | chr5_2:35391943-35391962 | Msa0768710:intron | 45.0% |
| ! | GCTCCTCGAGGTTTTTACAA+GGG | - | chr5_2:35391944-35391963 | Msa0768710:intron | 45.0% |
| TTGCGAGTGAAGAAACCAGT+GGG | + | chr5_2:35391983-35392002 | None:intergenic | 45.0% | |
| TTTGCGAGTGAAGAAACCAG+TGG | + | chr5_2:35391984-35392003 | None:intergenic | 45.0% | |
| ! | ACTGGTTTCTTCACTCGCAA+AGG | - | chr5_2:35391983-35392002 | Msa0768710:intron | 45.0% |
| !! | ATCTGGAGAATGGTACTGAC+AGG | + | chr5_2:35392444-35392463 | None:intergenic | 45.0% |
| !!! | AAAGCCTTTTAGCTCTGGTC+CGG | + | chr5_2:35393558-35393577 | None:intergenic | 45.0% |
| CGCTTTATCTTTATGAGGGC+TGG | - | chr5_2:35393718-35393737 | Msa0768710:intron | 45.0% | |
| GCTGGTAGTCCTTTCTATTC+TGG | - | chr5_2:35393736-35393755 | Msa0768710:intron | 45.0% | |
| ACCCACCTGAAATAATACGC+AGG | + | chr5_2:35394049-35394068 | None:intergenic | 45.0% | |
| ! | TATTTCAGGTGGGTATGTGG+TGG | - | chr5_2:35394055-35394074 | Msa0768710:intron | 45.0% |
| ATTCTGTGAGTTTGGAGGGA+TGG | - | chr5_2:35394628-35394647 | Msa0768710:intron | 45.0% | |
| TTTGGAGGGATGGAGAGAAA+AGG | - | chr5_2:35394638-35394657 | Msa0768710:intron | 45.0% | |
| TTGGAGGGATGGAGAGAAAA+GGG | - | chr5_2:35394639-35394658 | Msa0768710:intron | 45.0% | |
| ! | GGATGGAGAGAAAAGGGTTT+TGG | - | chr5_2:35394645-35394664 | Msa0768710:intron | 45.0% |
| ATAAACTCTCGCTCACAAGG+TGG | - | chr5_2:35394781-35394800 | Msa0768710:intron | 45.0% | |
| GGGAAGGATTTGGGAGTAAA+AGG | + | chr5_2:35394829-35394848 | None:intergenic | 45.0% | |
| !! | ATGGGGCATTGGGATACATA+TGG | + | chr5_2:35394955-35394974 | None:intergenic | 45.0% |
| TTTAGCCGTTTGAGAAGCCT+CGG | + | chr5_2:35394992-35395011 | None:intergenic | 45.0% | |
| AAATCACCCCTCCCCTAATT+TGG | - | chr5_2:35395182-35395201 | Msa0768710:intron | 45.0% | |
| AAACCACCAAATTAGGGGAG+GGG | + | chr5_2:35395191-35395210 | None:intergenic | 45.0% | |
| CAAACCACCAAATTAGGGGA+GGG | + | chr5_2:35395192-35395211 | None:intergenic | 45.0% | |
| CGCCCATAAAAACTCCTACC+AGG | + | chr5_2:35390707-35390726 | None:intergenic | 50.0% | |
| CAAACACAAGCCGTGAATGG+AGG | + | chr5_2:35390785-35390804 | None:intergenic | 50.0% | |
| CTCCATTCACGGCTTGTGTT+TGG | - | chr5_2:35390783-35390802 | Msa0768710:intron | 50.0% | |
| CACCAAACACAAGCCGTGAA+TGG | + | chr5_2:35390788-35390807 | None:intergenic | 50.0% | |
| GTTCAAAGAGGAATGAGGGG+TGG | + | chr5_2:35390849-35390868 | None:intergenic | 50.0% | |
| TGAGTTATACCCTCAGGCAG+GGG | + | chr5_2:35390911-35390930 | None:intergenic | 50.0% | |
| ! | GTAACGGAGAATATGAGGGC+AGG | - | chr5_2:35391025-35391044 | Msa0768710:intron | 50.0% |
| CTCACAGAAGAAGATGCCTC+TGG | - | chr5_2:35391847-35391866 | Msa0768710:intron | 50.0% | |
| CACAGAAGAAGATGCCTCTG+GGG | - | chr5_2:35391849-35391868 | Msa0768710:intron | 50.0% | |
| !! | AAACCTCGAGGAGCACGTTT+TGG | + | chr5_2:35391938-35391957 | None:intergenic | 50.0% |
| TCATCGAAATCCCCAAGGCA+AGG | - | chr5_2:35392319-35392338 | Msa0768710:intron | 50.0% | |
| AAATCCCCAAGGCAAGGATG+CGG | - | chr5_2:35392325-35392344 | Msa0768710:intron | 50.0% | |
| GATACTGCAGCTAAGGACAG+TGG | + | chr5_2:35394513-35394532 | None:intergenic | 50.0% | |
| ! | CTTCGCTTCTATGGGGCATT+GGG | + | chr5_2:35394965-35394984 | None:intergenic | 50.0% |
| TCTTCGCTTCTATGGGGCAT+TGG | + | chr5_2:35394966-35394985 | None:intergenic | 50.0% | |
| TCGGAGGTCTTCGCTTCTAT+GGG | + | chr5_2:35394973-35394992 | None:intergenic | 50.0% | |
| CCAAACCACCAAATTAGGGG+AGG | + | chr5_2:35395193-35395212 | None:intergenic | 50.0% | |
| ! | CCTCCCCTAATTTGGTGGTT+TGG | - | chr5_2:35395190-35395209 | Msa0768710:intron | 50.0% |
| !! | AATGGGCTAGCTCACACCCT+GGG | + | chr5_2:35391569-35391588 | None:intergenic | 55.0% |
| TTGACTGGCATCGCTGATGG+TGG | - | chr5_2:35391805-35391824 | Msa0768710:intron | 55.0% | |
| TCACCAAAACGTGCTCCTCG+AGG | - | chr5_2:35391932-35391951 | Msa0768710:intron | 55.0% | |
| GGAAAGAACTGCAAGCCCAC+TGG | - | chr5_2:35391965-35391984 | Msa0768710:intron | 55.0% | |
| AACTCCGCATCCTTGCCTTG+GGG | + | chr5_2:35392332-35392351 | None:intergenic | 55.0% | |
| CAACTCCGCATCCTTGCCTT+GGG | + | chr5_2:35392333-35392352 | None:intergenic | 55.0% | |
| !! | AGTGGAAAGCACTGGACGTC+CGG | - | chr5_2:35393536-35393555 | Msa0768710:intron | 55.0% |
| ACGTCCGGACCAGAGCTAAA+AGG | - | chr5_2:35393551-35393570 | Msa0768710:intron | 55.0% | |
| ! | AGGTGGGTATGTGGTGGTGA+AGG | - | chr5_2:35394061-35394080 | Msa0768710:intron | 55.0% |
| AACTCTCGCTCACAAGGTGG+AGG | - | chr5_2:35394784-35394803 | Msa0768710:intron | 55.0% | |
| CGGAGGTCTTCGCTTCTATG+GGG | + | chr5_2:35394972-35394991 | None:intergenic | 55.0% | |
| CTCGGAGGTCTTCGCTTCTA+TGG | + | chr5_2:35394974-35394993 | None:intergenic | 55.0% | |
| CATAGAAGCGAAGACCTCCG+AGG | - | chr5_2:35394972-35394991 | Msa0768710:intron | 55.0% | |
| GACCTCCGAGGCTTCTCAAA+CGG | - | chr5_2:35394984-35395003 | Msa0768710:intron | 55.0% | |
| TCACCCCTCCCCTAATTTGG+TGG | - | chr5_2:35395185-35395204 | Msa0768710:intron | 55.0% | |
| TCTAGATCTGCCCCTGCCTG+AGG | - | chr5_2:35390898-35390917 | Msa0768710:intron | 60.0% | |
| CTAGATCTGCCCCTGCCTGA+GGG | - | chr5_2:35390899-35390918 | Msa0768710:intron | 60.0% | |
| TGTAAACGGCCAACCAGCCC+AGG | - | chr5_2:35391549-35391568 | Msa0768710:intron | 60.0% | |
| GTAAACGGCCAACCAGCCCA+GGG | - | chr5_2:35391550-35391569 | Msa0768710:intron | 60.0% | |
| !! | CAATGGGCTAGCTCACACCC+TGG | + | chr5_2:35391570-35391589 | None:intergenic | 60.0% |
| GCAACTCCGCATCCTTGCCT+TGG | + | chr5_2:35392334-35392353 | None:intergenic | 60.0% | |
| AGCCGTTTGAGAAGCCTCGG+AGG | + | chr5_2:35394989-35395008 | None:intergenic | 60.0% | |
| GCTTCTCACGACGACCAGCG+CGG | + | chr5_2:35389974-35389993 | None:intergenic | 65.0% | |
| !! | AGCTCACACCCTGGGCTGGT+TGG | + | chr5_2:35391561-35391580 | None:intergenic | 65.0% |
| TCTCACGACGACCAGCGCGG+CGG | + | chr5_2:35389971-35389990 | None:intergenic | 70.0% | |
| ! | GGCTAGCTCACACCCTGGGC+TGG | + | chr5_2:35391565-35391584 | None:intergenic | 70.0% |
| AGCGCGGCGGCTGCGTTTCC+CGG | + | chr5_2:35389958-35389977 | None:intergenic | 75.0% | |
| ! | GGGAAACGCAGCCGCCGCGC+TGG | - | chr5_2:35389957-35389976 | Msa0768710:three_prime_UTR | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 35389871 | 35395347 | 35389871 | ID=Msa0768710;Name=Msa0768710 |
| chr5_2 | mRNA | 35389871 | 35395347 | 35389871 | ID=Msa0768710-mRNA-1;Parent=Msa0768710;Name=Msa0768710-mRNA-1;_AED=0.41;_eAED=0.41;_QI=149|1|1|1|1|0.75|4|333|92 |
| chr5_2 | exon | 35389871 | 35390272 | 35389871 | ID=Msa0768710-mRNA-1:exon:12058;Parent=Msa0768710-mRNA-1 |
| chr5_2 | exon | 35391091 | 35391155 | 35391091 | ID=Msa0768710-mRNA-1:exon:12057;Parent=Msa0768710-mRNA-1 |
| chr5_2 | exon | 35393214 | 35393364 | 35393214 | ID=Msa0768710-mRNA-1:exon:12056;Parent=Msa0768710-mRNA-1 |
| chr5_2 | exon | 35395205 | 35395347 | 35395205 | ID=Msa0768710-mRNA-1:exon:12055;Parent=Msa0768710-mRNA-1 |
| chr5_2 | five_prime_UTR | 35395205 | 35395347 | 35395205 | ID=Msa0768710-mRNA-1:five_prime_utr;Parent=Msa0768710-mRNA-1 |
| chr5_2 | five_prime_UTR | 35393359 | 35393364 | 35393359 | ID=Msa0768710-mRNA-1:five_prime_utr;Parent=Msa0768710-mRNA-1 |
| chr5_2 | CDS | 35393214 | 35393358 | 35393214 | ID=Msa0768710-mRNA-1:cds;Parent=Msa0768710-mRNA-1 |
| chr5_2 | CDS | 35391091 | 35391155 | 35391091 | ID=Msa0768710-mRNA-1:cds;Parent=Msa0768710-mRNA-1 |
| chr5_2 | CDS | 35390204 | 35390272 | 35390204 | ID=Msa0768710-mRNA-1:cds;Parent=Msa0768710-mRNA-1 |
| chr5_2 | three_prime_UTR | 35389871 | 35390203 | 35389871 | ID=Msa0768710-mRNA-1:three_prime_utr;Parent=Msa0768710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
