AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0769400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0769400 MtrunA17_Chr5g0393541 91.509 212 9 2 1 207 1 208 1.19e-133 379
Msa0769400 MtrunA17_Chr5g0393481 68.929 280 41 5 3 276 7 246 3.01e-97 285
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0769400 AT4G34150.1 49.817 273 103 7 2 273 3 242 6.61e-61 193

Find 125 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCACGAAGGCCTTCAATT+AGG 0.223666 5_2:+37569386 None:intergenic
CTCACGAAGGCCTTCAATTA+GGG 0.298122 5_2:+37569387 None:intergenic
ATGAACTTCTCTTGAAATAC+AGG 0.329350 5_2:+37569415 None:intergenic
GAGATATAAGAAACAAAATC+TGG 0.335243 5_2:+37568163 None:intergenic
AAGAATTACTTACCAGCGTT+TGG 0.337334 5_2:+37568359 None:intergenic
GTTTCTTATATCTCTACATT+AGG 0.348243 5_2:-37568154 Msa0769400:three_prime_UTR
ATATGATGGGACTGCTGTAT+AGG 0.351177 5_2:+37568718 None:intergenic
GTATTCACCCATCCATGTTA+TGG 0.353006 5_2:-37567884 Msa0769400:three_prime_UTR
TTCTCTGTGTATGACCAAAT+TGG 0.355431 5_2:+37567926 None:intergenic
GGGTAAGGTGGTGGTGGTTG+TGG 0.356727 5_2:+37568620 None:intergenic
TGGCCACTTCAAACTAAAAC+TGG 0.363854 5_2:-37569166 Msa0769400:CDS
GGACTGTTTAGTATCCAATT+TGG 0.365334 5_2:-37567940 Msa0769400:three_prime_UTR
GGCCAGCCTCTCGAGGTTAC+TGG 0.386852 5_2:-37569747 Msa0769400:intron
GGCGGATAAGAGTGGGGAGG+AGG 0.387349 5_2:+37568431 None:intergenic
GGACTGCTGTATAGGGAGTA+TGG 0.403544 5_2:+37568726 None:intergenic
GTGAGATCAATGTTGTCGTT+TGG 0.408755 5_2:-37569369 Msa0769400:CDS
TATGATGGGACTGCTGTATA+GGG 0.411289 5_2:+37568719 None:intergenic
GTAGCATATGTGTGTCAATA+TGG 0.415498 5_2:+37568242 None:intergenic
TTCATACTTCCCCTAATTGA+AGG 0.420730 5_2:-37569397 Msa0769400:CDS
TTTGGCATTGGCACTGGCAC+TGG 0.423645 5_2:+37568879 None:intergenic
GATGATGAGGGTGGTGGATA+GGG 0.427578 5_2:+37568521 None:intergenic
ATTCACTTTGGCATTGGCAC+TGG 0.437316 5_2:+37568873 None:intergenic
CTGGTGATTCACTTTGGCAT+TGG 0.439416 5_2:+37568867 None:intergenic
GCATGTTCTTGTTCGGAACT+TGG 0.446926 5_2:+37569558 None:intergenic
TGTGGGTAGTAGGAAGGAAC+AGG 0.447068 5_2:+37568692 None:intergenic
CGAAATTGAAAGACACTGAA+TGG 0.450034 5_2:-37569624 Msa0769400:CDS
GTGTGGTTGTTGTGGGTAGT+AGG 0.452219 5_2:+37568682 None:intergenic
AACCAGTGCATGTTCTTGTT+CGG 0.457517 5_2:+37569551 None:intergenic
TCACTCACGATGATGATGTC+TGG 0.459098 5_2:-37569777 Msa0769400:exon
TGATGATGAGGGTGGTGGAT+AGG 0.463785 5_2:+37568520 None:intergenic
GATGACACTGATTGAGGGTA+TGG 0.470349 5_2:+37568545 None:intergenic
AATTAGAGTGTGGTTGTTGT+GGG 0.481190 5_2:+37568675 None:intergenic
TACCAGTAACCTCGAGAGGC+TGG 0.487326 5_2:+37569745 None:intergenic
CTGAAGATGGCGGATAAGAG+TGG 0.491172 5_2:+37568423 None:intergenic
TAATTAGAGTGTGGTTGTTG+TGG 0.492816 5_2:+37568674 None:intergenic
ATAACAAAGATGTGGATTAG+TGG 0.493686 5_2:-37568026 Msa0769400:three_prime_UTR
TATGGATATGTTGAGGATGG+TGG 0.494303 5_2:+37568563 None:intergenic
ACAAAAGCACGGTGGTTCCT+TGG 0.495307 5_2:+37568211 None:intergenic
GAAGGAACAGGATTATATGA+TGG 0.495410 5_2:+37568704 None:intergenic
TGGGGAGGAGGGTACGGTGA+TGG 0.496971 5_2:+37568443 None:intergenic
CCTGCAGGTGGAGGGTATGA+TGG 0.497690 5_2:+37568389 None:intergenic
TAAGAGTGGGGAGGAGGGTA+CGG 0.498100 5_2:+37568437 None:intergenic
GGAGTATGGCTTGAGGAGCC+TGG 0.500219 5_2:+37568740 None:intergenic
TAAGCAACAGCAGGTGTTGT+TGG 0.507242 5_2:+37568644 None:intergenic
TAGGGAGATGACACTGATTG+AGG 0.507262 5_2:+37568539 None:intergenic
CACTCACTCCATAACATGGA+TGG 0.509142 5_2:+37567876 None:intergenic
TAGGGAGATGGCACTGAAGG+AGG 0.510794 5_2:+37568488 None:intergenic
CACTCACGATGATGATGTCT+GGG 0.514047 5_2:-37569776 Msa0769400:exon
TACACAGAGAATGACAAACT+TGG 0.514496 5_2:-37567914 Msa0769400:three_prime_UTR
GATGGCACTGAAGGAGGGTA+TGG 0.515857 5_2:+37568494 None:intergenic
GGTTACCTGGTGATTCACTT+TGG 0.517974 5_2:+37568861 None:intergenic
GGAGGATAACCTGCAGGTGG+AGG 0.519441 5_2:+37568380 None:intergenic
ATGATGATGTCTGGGATTCA+AGG 0.520106 5_2:-37569768 Msa0769400:CDS
GTGTGTCAATATGGCGGTGG+AGG 0.520887 5_2:+37568251 None:intergenic
GATGATGAAGTTGGTGGATA+GGG 0.524032 5_2:+37568470 None:intergenic
TTACACAAAGTTCTCTCTCA+AGG 0.524703 5_2:-37569205 Msa0769400:CDS
CCATCATACCCTCCACCTGC+AGG 0.528050 5_2:-37568389 Msa0769400:CDS
AATTACTTACCAGCGTTTGG+AGG 0.530399 5_2:+37568362 None:intergenic
AGGGAGATGACACTGATTGA+GGG 0.533173 5_2:+37568540 None:intergenic
TGATGATGAAGTTGGTGGAT+AGG 0.533342 5_2:+37568469 None:intergenic
GGATAGGGAGATGGCACTGA+AGG 0.535955 5_2:+37568485 None:intergenic
GGTGGAGGGTATGATGGTGG+TGG 0.541763 5_2:+37568395 None:intergenic
CACTTCAAACTAAAACTGGC+AGG 0.546655 5_2:-37569162 Msa0769400:intron
GGTGATGATGATGAGGGTGG+TGG 0.549858 5_2:+37568515 None:intergenic
TGAAGATGGCGGATAAGAGT+GGG 0.557216 5_2:+37568424 None:intergenic
GCAGCAGGGTAAGGTGGTGG+TGG 0.559747 5_2:+37568614 None:intergenic
GAGGATGGTGGATAAGAAGA+TGG 0.563718 5_2:+37568575 None:intergenic
TTATGTGAATGTGAAGCAGC+AGG 0.565883 5_2:+37568599 None:intergenic
AAGGAACAGGATTATATGAT+GGG 0.567570 5_2:+37568705 None:intergenic
AGGGTATGGTGATGATGATG+AGG 0.569188 5_2:+37568508 None:intergenic
GATGGTGATGATGATGAAGT+TGG 0.569892 5_2:+37568461 None:intergenic
GAATGTGAAGCAGCAGGGTA+AGG 0.573678 5_2:+37568605 None:intergenic
GGTGATGATGATGAAGTTGG+TGG 0.574618 5_2:+37568464 None:intergenic
GCAGGTGGAGGGTATGATGG+TGG 0.574871 5_2:+37568392 None:intergenic
AGATATAAGAAACAAAATCT+GGG 0.579766 5_2:+37568164 None:intergenic
GGTTGTTGTGGGTAGTAGGA+AGG 0.584669 5_2:+37568686 None:intergenic
TTCCGAACAAGAACATGCAC+TGG 0.585438 5_2:-37569553 Msa0769400:intron
AGGGAGATGGCACTGAAGGA+GGG 0.585482 5_2:+37568489 None:intergenic
AGCGTATTCGATGCAAACGT+AGG 0.585596 5_2:+37569585 None:intergenic
CATCCATGTTATGGAGTGAG+TGG 0.586586 5_2:-37567875 Msa0769400:three_prime_UTR
ATTCTATTATAACAAAGATG+TGG 0.588382 5_2:-37568034 Msa0769400:three_prime_UTR
GGGTATGGATATGTTGAGGA+TGG 0.588607 5_2:+37568560 None:intergenic
GCGTTTGGAGGATAACCTGC+AGG 0.588898 5_2:+37568374 None:intergenic
GATAAAATCATCGAAGGTGA+CGG 0.590599 5_2:+37569336 None:intergenic
GAGGATAACCTGCAGGTGGA+GGG 0.591147 5_2:+37568381 None:intergenic
GCGGATAAGAGTGGGGAGGA+GGG 0.591531 5_2:+37568432 None:intergenic
TCACGAAGGCCTTCAATTAG+GGG 0.593261 5_2:+37569388 None:intergenic
TGTTCTTGTTCGGAACTTGG+TGG 0.595740 5_2:+37569561 None:intergenic
AGCCCACTCACTCCATAACA+TGG 0.598623 5_2:+37567872 None:intergenic
ACACAGAGAATGACAAACTT+GGG 0.599928 5_2:-37567913 Msa0769400:three_prime_UTR
CAACAGCAGGTGTTGTTGGA+TGG 0.604074 5_2:+37568648 None:intergenic
TGAACTTCTCTTGAAATACA+GGG 0.608951 5_2:+37569416 None:intergenic
GCGTATTCGATGCAAACGTA+GGG 0.609000 5_2:+37569586 None:intergenic
CAATGCCAAAGTGAATCACC+AGG 0.609446 5_2:-37568866 Msa0769400:intron
ATATGCTACTTTCGCTACCA+AGG 0.613661 5_2:-37568228 Msa0769400:three_prime_UTR
ATCCATGTTATGGAGTGAGT+GGG 0.616219 5_2:-37567874 Msa0769400:three_prime_UTR
ACTCACTCCATAACATGGAT+GGG 0.618097 5_2:+37567877 None:intergenic
GATGGCGGATAAGAGTGGGG+AGG 0.623756 5_2:+37568428 None:intergenic
GAAGCAGCAGGGTAAGGTGG+TGG 0.624794 5_2:+37568611 None:intergenic
GCTAATATATTGCAGAAACC+AGG 0.627769 5_2:-37568758 Msa0769400:intron
GATTCAAGGCCAGCCTCTCG+AGG 0.627817 5_2:-37569754 Msa0769400:CDS
GAAGTTGGTGGATAGGGAGA+TGG 0.631529 5_2:+37568476 None:intergenic
GGGTATGGTGATGATGATGA+GGG 0.634043 5_2:+37568509 None:intergenic
ATCTTACCAGTAACCTCGAG+AGG 0.634279 5_2:+37569741 None:intergenic
GGTTGTGGATAAGCAACAGC+AGG 0.634892 5_2:+37568635 None:intergenic
GGTGGTGGATAAGCTGAAGA+TGG 0.637025 5_2:+37568410 None:intergenic
GGATGGTGATAATTAGAGTG+TGG 0.637190 5_2:+37568665 None:intergenic
TATGGTGATGATGATGAGGG+TGG 0.640824 5_2:+37568512 None:intergenic
TGTGTCAATATGGCGGTGGA+GGG 0.643568 5_2:+37568252 None:intergenic
ACTAATCATGTACAAAAGCA+CGG 0.644803 5_2:+37568200 None:intergenic
TATGTGAATGTGAAGCAGCA+GGG 0.647936 5_2:+37568600 None:intergenic
GCAGGTTATCCTCCAAACGC+TGG 0.651932 5_2:-37568371 Msa0769400:intron
TGTGAAGCAGCAGGGTAAGG+TGG 0.654828 5_2:+37568608 None:intergenic
TTTGGAGGATAACCTGCAGG+TGG 0.658511 5_2:+37568377 None:intergenic
TGTCTGTCTGACAGACACGC+AGG 0.660568 5_2:-37568928 Msa0769400:intron
TATGTGTGTCAATATGGCGG+TGG 0.670842 5_2:+37568248 None:intergenic
GGTGCCGATAAAATCATCGA+AGG 0.673086 5_2:+37569330 None:intergenic
TTGAGGGTATGGATATGTTG+AGG 0.674935 5_2:+37568556 None:intergenic
TCTCAATTACATTATACATG+CGG 0.684133 5_2:-37567961 Msa0769400:three_prime_UTR
TGTATAGGGAGTATGGCTTG+AGG 0.692075 5_2:+37568733 None:intergenic
GAAGATGGCGGATAAGAGTG+GGG 0.705455 5_2:+37568425 None:intergenic
GGTGGATAAGCTGAAGATGG+CGG 0.729568 5_2:+37568413 None:intergenic
CGACAACATTGATCTCACGA+AGG 0.730875 5_2:+37569374 None:intergenic
GCATATGTGTGTCAATATGG+CGG 0.756030 5_2:+37568245 None:intergenic
AATCATGTACAAAAGCACGG+TGG 0.829684 5_2:+37568203 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACATATATATAATAACAAT+TGG - chr5_2:37568886-37568905 Msa0769400:CDS 10.0%
!! TACATATATATAATAACAAT+TGG - chr5_2:37568886-37568905 Msa0769400:CDS 10.0%
!! ATAAATAGTAATGAAAATGT+AGG + chr5_2:37568859-37568878 None:intergenic 15.0%
!!! ACTATCTATCATTATTTTTT+TGG - chr5_2:37569626-37569645 Msa0769400:CDS 15.0%
!!! CTATCTATCATTATTTTTTT+GGG - chr5_2:37569627-37569646 Msa0769400:CDS 15.0%
!! ATAAATAGTAATGAAAATGT+AGG + chr5_2:37568859-37568878 None:intergenic 15.0%
!!! ACTATCTATCATTATTTTTT+TGG - chr5_2:37569626-37569645 Msa0769400:CDS 15.0%
!!! CTATCTATCATTATTTTTTT+GGG - chr5_2:37569627-37569646 Msa0769400:CDS 15.0%
!!! TATATTCTCTGTCTTATTTT+AGG - chr5_2:37568462-37568481 Msa0769400:CDS 20.0%
!!! ATATTCTCTGTCTTATTTTA+GGG - chr5_2:37568463-37568482 Msa0769400:CDS 20.0%
!! AGATATAAGAAACAAAATCT+GGG + chr5_2:37569535-37569554 None:intergenic 20.0%
!! ATTCTATTATAACAAAGATG+TGG - chr5_2:37569662-37569681 Msa0769400:intron 20.0%
!!! TATATTCTCTGTCTTATTTT+AGG - chr5_2:37568462-37568481 Msa0769400:CDS 20.0%
!!! ATATTCTCTGTCTTATTTTA+GGG - chr5_2:37568463-37568482 Msa0769400:CDS 20.0%
!! AGATATAAGAAACAAAATCT+GGG + chr5_2:37569535-37569554 None:intergenic 20.0%
!! ATTCTATTATAACAAAGATG+TGG - chr5_2:37569662-37569681 Msa0769400:intron 20.0%
!!! GTTGATTTTAATCTTTGACT+TGG - chr5_2:37567985-37568004 Msa0769400:three_prime_UTR 25.0%
!! TGAATTGAATAGTTACTTTC+CGG + chr5_2:37568390-37568409 None:intergenic 25.0%
! TCTCATCTATAATTTCGATA+TGG + chr5_2:37568586-37568605 None:intergenic 25.0%
! TGATTCTTAATAAGTGTGTT+TGG - chr5_2:37568912-37568931 Msa0769400:CDS 25.0%
! GATTCTTAATAAGTGTGTTT+GGG - chr5_2:37568913-37568932 Msa0769400:CDS 25.0%
! AGTAGATGTGAAAATTGAAA+TGG + chr5_2:37569376-37569395 None:intergenic 25.0%
! GAGATATAAGAAACAAAATC+TGG + chr5_2:37569536-37569555 None:intergenic 25.0%
! GTTTCTTATATCTCTACATT+AGG - chr5_2:37569542-37569561 Msa0769400:intron 25.0%
! TCTCAATTACATTATACATG+CGG - chr5_2:37569735-37569754 Msa0769400:intron 25.0%
!!! GTTGATTTTAATCTTTGACT+TGG - chr5_2:37567985-37568004 Msa0769400:three_prime_UTR 25.0%
!! TGAATTGAATAGTTACTTTC+CGG + chr5_2:37568390-37568409 None:intergenic 25.0%
! TCTCATCTATAATTTCGATA+TGG + chr5_2:37568586-37568605 None:intergenic 25.0%
! TGATTCTTAATAAGTGTGTT+TGG - chr5_2:37568912-37568931 Msa0769400:CDS 25.0%
! GATTCTTAATAAGTGTGTTT+GGG - chr5_2:37568913-37568932 Msa0769400:CDS 25.0%
! AGTAGATGTGAAAATTGAAA+TGG + chr5_2:37569376-37569395 None:intergenic 25.0%
! GAGATATAAGAAACAAAATC+TGG + chr5_2:37569536-37569555 None:intergenic 25.0%
! GTTTCTTATATCTCTACATT+AGG - chr5_2:37569542-37569561 Msa0769400:intron 25.0%
! TCTCAATTACATTATACATG+CGG - chr5_2:37569735-37569754 Msa0769400:intron 25.0%
AAACGACTACAATAACAGAA+AGG + chr5_2:37568046-37568065 None:intergenic 30.0%
AAGAGTCAACGATTCAAATA+CGG + chr5_2:37568233-37568252 None:intergenic 30.0%
TGAACTTCTCTTGAAATACA+GGG + chr5_2:37568283-37568302 None:intergenic 30.0%
ATGAACTTCTCTTGAAATAC+AGG + chr5_2:37568284-37568303 None:intergenic 30.0%
TCGAAATTATAGATGAGACT+TGG - chr5_2:37568588-37568607 Msa0769400:CDS 30.0%
!! GATTGATACAGTTGTTTCTT+AGG - chr5_2:37568613-37568632 Msa0769400:CDS 30.0%
AGACTTAATCAGTTAGCATT+AGG - chr5_2:37568686-37568705 Msa0769400:CDS 30.0%
TAATGAAAATGTAGGTTACC+TGG + chr5_2:37568851-37568870 None:intergenic 30.0%
AAGGAACAGGATTATATGAT+GGG + chr5_2:37568994-37569013 None:intergenic 30.0%
GATGTGAAAATTGAAATGGT+TGG + chr5_2:37569372-37569391 None:intergenic 30.0%
ACTAATCATGTACAAAAGCA+CGG + chr5_2:37569499-37569518 None:intergenic 30.0%
!! ATAACAAAGATGTGGATTAG+TGG - chr5_2:37569670-37569689 Msa0769400:intron 30.0%
AAACGACTACAATAACAGAA+AGG + chr5_2:37568046-37568065 None:intergenic 30.0%
AAGAGTCAACGATTCAAATA+CGG + chr5_2:37568233-37568252 None:intergenic 30.0%
TGAACTTCTCTTGAAATACA+GGG + chr5_2:37568283-37568302 None:intergenic 30.0%
ATGAACTTCTCTTGAAATAC+AGG + chr5_2:37568284-37568303 None:intergenic 30.0%
TCGAAATTATAGATGAGACT+TGG - chr5_2:37568588-37568607 Msa0769400:CDS 30.0%
!! GATTGATACAGTTGTTTCTT+AGG - chr5_2:37568613-37568632 Msa0769400:CDS 30.0%
AGACTTAATCAGTTAGCATT+AGG - chr5_2:37568686-37568705 Msa0769400:CDS 30.0%
TAATGAAAATGTAGGTTACC+TGG + chr5_2:37568851-37568870 None:intergenic 30.0%
AAGGAACAGGATTATATGAT+GGG + chr5_2:37568994-37569013 None:intergenic 30.0%
GATGTGAAAATTGAAATGGT+TGG + chr5_2:37569372-37569391 None:intergenic 30.0%
ACTAATCATGTACAAAAGCA+CGG + chr5_2:37569499-37569518 None:intergenic 30.0%
!! ATAACAAAGATGTGGATTAG+TGG - chr5_2:37569670-37569689 Msa0769400:intron 30.0%
CGAAATTGAAAGACACTGAA+TGG - chr5_2:37568072-37568091 Msa0769400:three_prime_UTR 35.0%
CTCTTTCTTTCAATTCCAGA+CGG - chr5_2:37568248-37568267 Msa0769400:exon 35.0%
TTCATACTTCCCCTAATTGA+AGG - chr5_2:37568299-37568318 Msa0769400:intron 35.0%
GATAAAATCATCGAAGGTGA+CGG + chr5_2:37568363-37568382 None:intergenic 35.0%
! GTCACCTTCGATGATTTTAT+CGG - chr5_2:37568362-37568381 Msa0769400:intron 35.0%
TTACACAAAGTTCTCTCTCA+AGG - chr5_2:37568491-37568510 Msa0769400:CDS 35.0%
TTTCGATATGGATGAGACAA+AGG + chr5_2:37568574-37568593 None:intergenic 35.0%
GCTAATATATTGCAGAAACC+AGG - chr5_2:37568938-37568957 Msa0769400:intron 35.0%
GAAGGAACAGGATTATATGA+TGG + chr5_2:37568995-37569014 None:intergenic 35.0%
AATTAGAGTGTGGTTGTTGT+GGG + chr5_2:37569024-37569043 None:intergenic 35.0%
TAATTAGAGTGTGGTTGTTG+TGG + chr5_2:37569025-37569044 None:intergenic 35.0%
AAGAATTACTTACCAGCGTT+TGG + chr5_2:37569340-37569359 None:intergenic 35.0%
GAAAAAGGATGTGATTGGAA+AGG + chr5_2:37569415-37569434 None:intergenic 35.0%
! TTCCAATCACATCCTTTTTC+AGG - chr5_2:37569415-37569434 Msa0769400:CDS 35.0%
ATCCTGAAAAAGGATGTGAT+TGG + chr5_2:37569420-37569439 None:intergenic 35.0%
GTAGCATATGTGTGTCAATA+TGG + chr5_2:37569457-37569476 None:intergenic 35.0%
GGACTGTTTAGTATCCAATT+TGG - chr5_2:37569756-37569775 Msa0769400:CDS 35.0%
TTCTCTGTGTATGACCAAAT+TGG + chr5_2:37569773-37569792 None:intergenic 35.0%
TACACAGAGAATGACAAACT+TGG - chr5_2:37569782-37569801 Msa0769400:exon 35.0%
ACACAGAGAATGACAAACTT+GGG - chr5_2:37569783-37569802 Msa0769400:exon 35.0%
CGAAATTGAAAGACACTGAA+TGG - chr5_2:37568072-37568091 Msa0769400:three_prime_UTR 35.0%
CTCTTTCTTTCAATTCCAGA+CGG - chr5_2:37568248-37568267 Msa0769400:exon 35.0%
TTCATACTTCCCCTAATTGA+AGG - chr5_2:37568299-37568318 Msa0769400:intron 35.0%
GATAAAATCATCGAAGGTGA+CGG + chr5_2:37568363-37568382 None:intergenic 35.0%
! GTCACCTTCGATGATTTTAT+CGG - chr5_2:37568362-37568381 Msa0769400:intron 35.0%
TTACACAAAGTTCTCTCTCA+AGG - chr5_2:37568491-37568510 Msa0769400:CDS 35.0%
TTTCGATATGGATGAGACAA+AGG + chr5_2:37568574-37568593 None:intergenic 35.0%
GCTAATATATTGCAGAAACC+AGG - chr5_2:37568938-37568957 Msa0769400:intron 35.0%
GAAGGAACAGGATTATATGA+TGG + chr5_2:37568995-37569014 None:intergenic 35.0%
AATTAGAGTGTGGTTGTTGT+GGG + chr5_2:37569024-37569043 None:intergenic 35.0%
TAATTAGAGTGTGGTTGTTG+TGG + chr5_2:37569025-37569044 None:intergenic 35.0%
AAGAATTACTTACCAGCGTT+TGG + chr5_2:37569340-37569359 None:intergenic 35.0%
GAAAAAGGATGTGATTGGAA+AGG + chr5_2:37569415-37569434 None:intergenic 35.0%
! TTCCAATCACATCCTTTTTC+AGG - chr5_2:37569415-37569434 Msa0769400:CDS 35.0%
ATCCTGAAAAAGGATGTGAT+TGG + chr5_2:37569420-37569439 None:intergenic 35.0%
GTAGCATATGTGTGTCAATA+TGG + chr5_2:37569457-37569476 None:intergenic 35.0%
GGACTGTTTAGTATCCAATT+TGG - chr5_2:37569756-37569775 Msa0769400:CDS 35.0%
TTCTCTGTGTATGACCAAAT+TGG + chr5_2:37569773-37569792 None:intergenic 35.0%
TACACAGAGAATGACAAACT+TGG - chr5_2:37569782-37569801 Msa0769400:exon 35.0%
ACACAGAGAATGACAAACTT+GGG - chr5_2:37569783-37569802 Msa0769400:exon 35.0%
! ATGATGATGTCTGGGATTCA+AGG - chr5_2:37567928-37567947 Msa0769400:three_prime_UTR 40.0%
AACCAGTGCATGTTCTTGTT+CGG + chr5_2:37568148-37568167 None:intergenic 40.0%
TTTCTTTCAATTCCAGACGG+CGG - chr5_2:37568251-37568270 Msa0769400:exon 40.0%
GTGAGATCAATGTTGTCGTT+TGG - chr5_2:37568327-37568346 Msa0769400:intron 40.0%
! TTCGATGATTTTATCGGCAC+CGG - chr5_2:37568368-37568387 Msa0769400:intron 40.0%
!! AAGGTTTTGACGACTCTTCT+TGG - chr5_2:37568510-37568529 Msa0769400:CDS 40.0%
TGGCCACTTCAAACTAAAAC+TGG - chr5_2:37568530-37568549 Msa0769400:CDS 40.0%
!!! CTGCCAGTTTTAGTTTGAAG+TGG + chr5_2:37568536-37568555 None:intergenic 40.0%
CACTTCAAACTAAAACTGGC+AGG - chr5_2:37568534-37568553 Msa0769400:CDS 40.0%
GATGAGACAAAGGAATACTG+AGG + chr5_2:37568564-37568583 None:intergenic 40.0%
! TATGATGGGACTGCTGTATA+GGG + chr5_2:37568980-37568999 None:intergenic 40.0%
! ATATGATGGGACTGCTGTAT+AGG + chr5_2:37568981-37569000 None:intergenic 40.0%
GGATGGTGATAATTAGAGTG+TGG + chr5_2:37569034-37569053 None:intergenic 40.0%
TATGTGAATGTGAAGCAGCA+GGG + chr5_2:37569099-37569118 None:intergenic 40.0%
TTATGTGAATGTGAAGCAGC+AGG + chr5_2:37569100-37569119 None:intergenic 40.0%
TATGGATATGTTGAGGATGG+TGG + chr5_2:37569136-37569155 None:intergenic 40.0%
! TTGAGGGTATGGATATGTTG+AGG + chr5_2:37569143-37569162 None:intergenic 40.0%
!! GATGATGAAGTTGGTGGATA+GGG + chr5_2:37569229-37569248 None:intergenic 40.0%
!! TGATGATGAAGTTGGTGGAT+AGG + chr5_2:37569230-37569249 None:intergenic 40.0%
! GATGGTGATGATGATGAAGT+TGG + chr5_2:37569238-37569257 None:intergenic 40.0%
AATTACTTACCAGCGTTTGG+AGG + chr5_2:37569337-37569356 None:intergenic 40.0%
GCATATGTGTGTCAATATGG+CGG + chr5_2:37569454-37569473 None:intergenic 40.0%
!! ATATGCTACTTTCGCTACCA+AGG - chr5_2:37569468-37569487 Msa0769400:intron 40.0%
! AATCATGTACAAAAGCACGG+TGG + chr5_2:37569496-37569515 None:intergenic 40.0%
GTATTCACCCATCCATGTTA+TGG - chr5_2:37569812-37569831 Msa0769400:five_prime_UTR 40.0%
ACTCACTCCATAACATGGAT+GGG + chr5_2:37569822-37569841 None:intergenic 40.0%
ATCCATGTTATGGAGTGAGT+GGG - chr5_2:37569822-37569841 Msa0769400:five_prime_UTR 40.0%
! ATGATGATGTCTGGGATTCA+AGG - chr5_2:37567928-37567947 Msa0769400:three_prime_UTR 40.0%
AACCAGTGCATGTTCTTGTT+CGG + chr5_2:37568148-37568167 None:intergenic 40.0%
TTTCTTTCAATTCCAGACGG+CGG - chr5_2:37568251-37568270 Msa0769400:exon 40.0%
GTGAGATCAATGTTGTCGTT+TGG - chr5_2:37568327-37568346 Msa0769400:intron 40.0%
! TTCGATGATTTTATCGGCAC+CGG - chr5_2:37568368-37568387 Msa0769400:intron 40.0%
!! AAGGTTTTGACGACTCTTCT+TGG - chr5_2:37568510-37568529 Msa0769400:CDS 40.0%
TGGCCACTTCAAACTAAAAC+TGG - chr5_2:37568530-37568549 Msa0769400:CDS 40.0%
!!! CTGCCAGTTTTAGTTTGAAG+TGG + chr5_2:37568536-37568555 None:intergenic 40.0%
CACTTCAAACTAAAACTGGC+AGG - chr5_2:37568534-37568553 Msa0769400:CDS 40.0%
GATGAGACAAAGGAATACTG+AGG + chr5_2:37568564-37568583 None:intergenic 40.0%
! TATGATGGGACTGCTGTATA+GGG + chr5_2:37568980-37568999 None:intergenic 40.0%
! ATATGATGGGACTGCTGTAT+AGG + chr5_2:37568981-37569000 None:intergenic 40.0%
GGATGGTGATAATTAGAGTG+TGG + chr5_2:37569034-37569053 None:intergenic 40.0%
TATGTGAATGTGAAGCAGCA+GGG + chr5_2:37569099-37569118 None:intergenic 40.0%
TTATGTGAATGTGAAGCAGC+AGG + chr5_2:37569100-37569119 None:intergenic 40.0%
TATGGATATGTTGAGGATGG+TGG + chr5_2:37569136-37569155 None:intergenic 40.0%
! TTGAGGGTATGGATATGTTG+AGG + chr5_2:37569143-37569162 None:intergenic 40.0%
!! GATGATGAAGTTGGTGGATA+GGG + chr5_2:37569229-37569248 None:intergenic 40.0%
!! TGATGATGAAGTTGGTGGAT+AGG + chr5_2:37569230-37569249 None:intergenic 40.0%
! GATGGTGATGATGATGAAGT+TGG + chr5_2:37569238-37569257 None:intergenic 40.0%
AATTACTTACCAGCGTTTGG+AGG + chr5_2:37569337-37569356 None:intergenic 40.0%
GCATATGTGTGTCAATATGG+CGG + chr5_2:37569454-37569473 None:intergenic 40.0%
!! ATATGCTACTTTCGCTACCA+AGG - chr5_2:37569468-37569487 Msa0769400:intron 40.0%
! AATCATGTACAAAAGCACGG+TGG + chr5_2:37569496-37569515 None:intergenic 40.0%
GTATTCACCCATCCATGTTA+TGG - chr5_2:37569812-37569831 Msa0769400:five_prime_UTR 40.0%
ACTCACTCCATAACATGGAT+GGG + chr5_2:37569822-37569841 None:intergenic 40.0%
ATCCATGTTATGGAGTGAGT+GGG - chr5_2:37569822-37569841 Msa0769400:five_prime_UTR 40.0%
! TCACTCACGATGATGATGTC+TGG - chr5_2:37567919-37567938 Msa0769400:three_prime_UTR 45.0%
! CACTCACGATGATGATGTCT+GGG - chr5_2:37567920-37567939 Msa0769400:three_prime_UTR 45.0%
ATCTTACCAGTAACCTCGAG+AGG + chr5_2:37567958-37567977 None:intergenic 45.0%
GCGTATTCGATGCAAACGTA+GGG + chr5_2:37568113-37568132 None:intergenic 45.0%
AGCGTATTCGATGCAAACGT+AGG + chr5_2:37568114-37568133 None:intergenic 45.0%
TGTTCTTGTTCGGAACTTGG+TGG + chr5_2:37568138-37568157 None:intergenic 45.0%
GCATGTTCTTGTTCGGAACT+TGG + chr5_2:37568141-37568160 None:intergenic 45.0%
TTCCGAACAAGAACATGCAC+TGG - chr5_2:37568143-37568162 Msa0769400:three_prime_UTR 45.0%
TCACGAAGGCCTTCAATTAG+GGG + chr5_2:37568311-37568330 None:intergenic 45.0%
CTCACGAAGGCCTTCAATTA+GGG + chr5_2:37568312-37568331 None:intergenic 45.0%
TCTCACGAAGGCCTTCAATT+AGG + chr5_2:37568313-37568332 None:intergenic 45.0%
CGACAACATTGATCTCACGA+AGG + chr5_2:37568325-37568344 None:intergenic 45.0%
!! GGTGCCGATAAAATCATCGA+AGG + chr5_2:37568369-37568388 None:intergenic 45.0%
!! ATTCACTTTGGCATTGGCAC+TGG + chr5_2:37568826-37568845 None:intergenic 45.0%
CTGGTGATTCACTTTGGCAT+TGG + chr5_2:37568832-37568851 None:intergenic 45.0%
CAATGCCAAAGTGAATCACC+AGG - chr5_2:37568830-37568849 Msa0769400:intron 45.0%
GGTTACCTGGTGATTCACTT+TGG + chr5_2:37568838-37568857 None:intergenic 45.0%
! TGTATAGGGAGTATGGCTTG+AGG + chr5_2:37568966-37568985 None:intergenic 45.0%
! TAAGCAACAGCAGGTGTTGT+TGG + chr5_2:37569055-37569074 None:intergenic 45.0%
!! GAGGATGGTGGATAAGAAGA+TGG + chr5_2:37569124-37569143 None:intergenic 45.0%
GGGTATGGATATGTTGAGGA+TGG + chr5_2:37569139-37569158 None:intergenic 45.0%
! GATGACACTGATTGAGGGTA+TGG + chr5_2:37569154-37569173 None:intergenic 45.0%
! AGGGAGATGACACTGATTGA+GGG + chr5_2:37569159-37569178 None:intergenic 45.0%
! TAGGGAGATGACACTGATTG+AGG + chr5_2:37569160-37569179 None:intergenic 45.0%
! TATGGTGATGATGATGAGGG+TGG + chr5_2:37569187-37569206 None:intergenic 45.0%
! GGGTATGGTGATGATGATGA+GGG + chr5_2:37569190-37569209 None:intergenic 45.0%
! AGGGTATGGTGATGATGATG+AGG + chr5_2:37569191-37569210 None:intergenic 45.0%
! GGTGATGATGATGAAGTTGG+TGG + chr5_2:37569235-37569254 None:intergenic 45.0%
!! TGAAGATGGCGGATAAGAGT+GGG + chr5_2:37569275-37569294 None:intergenic 45.0%
GGAGGGTAGAATCCTGAAAA+AGG + chr5_2:37569430-37569449 None:intergenic 45.0%
TATGTGTGTCAATATGGCGG+TGG + chr5_2:37569451-37569470 None:intergenic 45.0%
CACTCACTCCATAACATGGA+TGG + chr5_2:37569823-37569842 None:intergenic 45.0%
CATCCATGTTATGGAGTGAG+TGG - chr5_2:37569821-37569840 Msa0769400:five_prime_UTR 45.0%
! TCACTCACGATGATGATGTC+TGG - chr5_2:37567919-37567938 Msa0769400:three_prime_UTR 45.0%
! CACTCACGATGATGATGTCT+GGG - chr5_2:37567920-37567939 Msa0769400:three_prime_UTR 45.0%
ATCTTACCAGTAACCTCGAG+AGG + chr5_2:37567958-37567977 None:intergenic 45.0%
GCGTATTCGATGCAAACGTA+GGG + chr5_2:37568113-37568132 None:intergenic 45.0%
AGCGTATTCGATGCAAACGT+AGG + chr5_2:37568114-37568133 None:intergenic 45.0%
TGTTCTTGTTCGGAACTTGG+TGG + chr5_2:37568138-37568157 None:intergenic 45.0%
GCATGTTCTTGTTCGGAACT+TGG + chr5_2:37568141-37568160 None:intergenic 45.0%
TTCCGAACAAGAACATGCAC+TGG - chr5_2:37568143-37568162 Msa0769400:three_prime_UTR 45.0%
TCACGAAGGCCTTCAATTAG+GGG + chr5_2:37568311-37568330 None:intergenic 45.0%
CTCACGAAGGCCTTCAATTA+GGG + chr5_2:37568312-37568331 None:intergenic 45.0%
TCTCACGAAGGCCTTCAATT+AGG + chr5_2:37568313-37568332 None:intergenic 45.0%
CGACAACATTGATCTCACGA+AGG + chr5_2:37568325-37568344 None:intergenic 45.0%
!! GGTGCCGATAAAATCATCGA+AGG + chr5_2:37568369-37568388 None:intergenic 45.0%
!! ATTCACTTTGGCATTGGCAC+TGG + chr5_2:37568826-37568845 None:intergenic 45.0%
CTGGTGATTCACTTTGGCAT+TGG + chr5_2:37568832-37568851 None:intergenic 45.0%
CAATGCCAAAGTGAATCACC+AGG - chr5_2:37568830-37568849 Msa0769400:intron 45.0%
GGTTACCTGGTGATTCACTT+TGG + chr5_2:37568838-37568857 None:intergenic 45.0%
! TGTATAGGGAGTATGGCTTG+AGG + chr5_2:37568966-37568985 None:intergenic 45.0%
! TAAGCAACAGCAGGTGTTGT+TGG + chr5_2:37569055-37569074 None:intergenic 45.0%
!! GAGGATGGTGGATAAGAAGA+TGG + chr5_2:37569124-37569143 None:intergenic 45.0%
GGGTATGGATATGTTGAGGA+TGG + chr5_2:37569139-37569158 None:intergenic 45.0%
! GATGACACTGATTGAGGGTA+TGG + chr5_2:37569154-37569173 None:intergenic 45.0%
! AGGGAGATGACACTGATTGA+GGG + chr5_2:37569159-37569178 None:intergenic 45.0%
! TAGGGAGATGACACTGATTG+AGG + chr5_2:37569160-37569179 None:intergenic 45.0%
! TATGGTGATGATGATGAGGG+TGG + chr5_2:37569187-37569206 None:intergenic 45.0%
! GGGTATGGTGATGATGATGA+GGG + chr5_2:37569190-37569209 None:intergenic 45.0%
! AGGGTATGGTGATGATGATG+AGG + chr5_2:37569191-37569210 None:intergenic 45.0%
! GGTGATGATGATGAAGTTGG+TGG + chr5_2:37569235-37569254 None:intergenic 45.0%
!! TGAAGATGGCGGATAAGAGT+GGG + chr5_2:37569275-37569294 None:intergenic 45.0%
GGAGGGTAGAATCCTGAAAA+AGG + chr5_2:37569430-37569449 None:intergenic 45.0%
TATGTGTGTCAATATGGCGG+TGG + chr5_2:37569451-37569470 None:intergenic 45.0%
CACTCACTCCATAACATGGA+TGG + chr5_2:37569823-37569842 None:intergenic 45.0%
CATCCATGTTATGGAGTGAG+TGG - chr5_2:37569821-37569840 Msa0769400:five_prime_UTR 45.0%
GGACTGCTGTATAGGGAGTA+TGG + chr5_2:37568973-37568992 None:intergenic 50.0%
TGTGGGTAGTAGGAAGGAAC+AGG + chr5_2:37569007-37569026 None:intergenic 50.0%
GGTTGTTGTGGGTAGTAGGA+AGG + chr5_2:37569013-37569032 None:intergenic 50.0%
GTGTGGTTGTTGTGGGTAGT+AGG + chr5_2:37569017-37569036 None:intergenic 50.0%
!! CAACAGCAGGTGTTGTTGGA+TGG + chr5_2:37569051-37569070 None:intergenic 50.0%
GGTTGTGGATAAGCAACAGC+AGG + chr5_2:37569064-37569083 None:intergenic 50.0%
GAATGTGAAGCAGCAGGGTA+AGG + chr5_2:37569094-37569113 None:intergenic 50.0%
!! GATGATGAGGGTGGTGGATA+GGG + chr5_2:37569178-37569197 None:intergenic 50.0%
!! TGATGATGAGGGTGGTGGAT+AGG + chr5_2:37569179-37569198 None:intergenic 50.0%
!! GAAGTTGGTGGATAGGGAGA+TGG + chr5_2:37569223-37569242 None:intergenic 50.0%
!! GAAGATGGCGGATAAGAGTG+GGG + chr5_2:37569274-37569293 None:intergenic 50.0%
!! CTGAAGATGGCGGATAAGAG+TGG + chr5_2:37569276-37569295 None:intergenic 50.0%
GGTGGATAAGCTGAAGATGG+CGG + chr5_2:37569286-37569305 None:intergenic 50.0%
!! GGTGGTGGATAAGCTGAAGA+TGG + chr5_2:37569289-37569308 None:intergenic 50.0%
TTTGGAGGATAACCTGCAGG+TGG + chr5_2:37569322-37569341 None:intergenic 50.0%
TGTGTCAATATGGCGGTGGA+GGG + chr5_2:37569447-37569466 None:intergenic 50.0%
! ACAAAAGCACGGTGGTTCCT+TGG + chr5_2:37569488-37569507 None:intergenic 50.0%
AGCCCACTCACTCCATAACA+TGG + chr5_2:37569827-37569846 None:intergenic 50.0%
GGACTGCTGTATAGGGAGTA+TGG + chr5_2:37568973-37568992 None:intergenic 50.0%
TGTGGGTAGTAGGAAGGAAC+AGG + chr5_2:37569007-37569026 None:intergenic 50.0%
GGTTGTTGTGGGTAGTAGGA+AGG + chr5_2:37569013-37569032 None:intergenic 50.0%
GTGTGGTTGTTGTGGGTAGT+AGG + chr5_2:37569017-37569036 None:intergenic 50.0%
!! CAACAGCAGGTGTTGTTGGA+TGG + chr5_2:37569051-37569070 None:intergenic 50.0%
GGTTGTGGATAAGCAACAGC+AGG + chr5_2:37569064-37569083 None:intergenic 50.0%
GAATGTGAAGCAGCAGGGTA+AGG + chr5_2:37569094-37569113 None:intergenic 50.0%
!! GATGATGAGGGTGGTGGATA+GGG + chr5_2:37569178-37569197 None:intergenic 50.0%
!! TGATGATGAGGGTGGTGGAT+AGG + chr5_2:37569179-37569198 None:intergenic 50.0%
!! GAAGTTGGTGGATAGGGAGA+TGG + chr5_2:37569223-37569242 None:intergenic 50.0%
!! GAAGATGGCGGATAAGAGTG+GGG + chr5_2:37569274-37569293 None:intergenic 50.0%
!! CTGAAGATGGCGGATAAGAG+TGG + chr5_2:37569276-37569295 None:intergenic 50.0%
GGTGGATAAGCTGAAGATGG+CGG + chr5_2:37569286-37569305 None:intergenic 50.0%
!! GGTGGTGGATAAGCTGAAGA+TGG + chr5_2:37569289-37569308 None:intergenic 50.0%
TTTGGAGGATAACCTGCAGG+TGG + chr5_2:37569322-37569341 None:intergenic 50.0%
TGTGTCAATATGGCGGTGGA+GGG + chr5_2:37569447-37569466 None:intergenic 50.0%
! ACAAAAGCACGGTGGTTCCT+TGG + chr5_2:37569488-37569507 None:intergenic 50.0%
AGCCCACTCACTCCATAACA+TGG + chr5_2:37569827-37569846 None:intergenic 50.0%
TACCAGTAACCTCGAGAGGC+TGG + chr5_2:37567954-37567973 None:intergenic 55.0%
!!! ACAGGGTTTTTTCCGCCGTC+TGG + chr5_2:37568266-37568285 None:intergenic 55.0%
CGTGTCTGTCAGACAGACAG+GGG + chr5_2:37568767-37568786 None:intergenic 55.0%
GCGTGTCTGTCAGACAGACA+GGG + chr5_2:37568768-37568787 None:intergenic 55.0%
TGCGTGTCTGTCAGACAGAC+AGG + chr5_2:37568769-37568788 None:intergenic 55.0%
TGTCTGTCTGACAGACACGC+AGG - chr5_2:37568768-37568787 Msa0769400:intron 55.0%
!! TTTGGCATTGGCACTGGCAC+TGG + chr5_2:37568820-37568839 None:intergenic 55.0%
TGTGAAGCAGCAGGGTAAGG+TGG + chr5_2:37569091-37569110 None:intergenic 55.0%
! GGTGATGATGATGAGGGTGG+TGG + chr5_2:37569184-37569203 None:intergenic 55.0%
! GATGGCACTGAAGGAGGGTA+TGG + chr5_2:37569205-37569224 None:intergenic 55.0%
! AGGGAGATGGCACTGAAGGA+GGG + chr5_2:37569210-37569229 None:intergenic 55.0%
! TAGGGAGATGGCACTGAAGG+AGG + chr5_2:37569211-37569230 None:intergenic 55.0%
! GGATAGGGAGATGGCACTGA+AGG + chr5_2:37569214-37569233 None:intergenic 55.0%
TAAGAGTGGGGAGGAGGGTA+CGG + chr5_2:37569262-37569281 None:intergenic 55.0%
GAGGATAACCTGCAGGTGGA+GGG + chr5_2:37569318-37569337 None:intergenic 55.0%
GCGTTTGGAGGATAACCTGC+AGG + chr5_2:37569325-37569344 None:intergenic 55.0%
GCAGGTTATCCTCCAAACGC+TGG - chr5_2:37569325-37569344 Msa0769400:CDS 55.0%
GTGTGTCAATATGGCGGTGG+AGG + chr5_2:37569448-37569467 None:intergenic 55.0%
TACCAGTAACCTCGAGAGGC+TGG + chr5_2:37567954-37567973 None:intergenic 55.0%
!!! ACAGGGTTTTTTCCGCCGTC+TGG + chr5_2:37568266-37568285 None:intergenic 55.0%
CGTGTCTGTCAGACAGACAG+GGG + chr5_2:37568767-37568786 None:intergenic 55.0%
GCGTGTCTGTCAGACAGACA+GGG + chr5_2:37568768-37568787 None:intergenic 55.0%
TGCGTGTCTGTCAGACAGAC+AGG + chr5_2:37568769-37568788 None:intergenic 55.0%
TGTCTGTCTGACAGACACGC+AGG - chr5_2:37568768-37568787 Msa0769400:intron 55.0%
!! TTTGGCATTGGCACTGGCAC+TGG + chr5_2:37568820-37568839 None:intergenic 55.0%
TGTGAAGCAGCAGGGTAAGG+TGG + chr5_2:37569091-37569110 None:intergenic 55.0%
! GGTGATGATGATGAGGGTGG+TGG + chr5_2:37569184-37569203 None:intergenic 55.0%
! GATGGCACTGAAGGAGGGTA+TGG + chr5_2:37569205-37569224 None:intergenic 55.0%
! AGGGAGATGGCACTGAAGGA+GGG + chr5_2:37569210-37569229 None:intergenic 55.0%
! TAGGGAGATGGCACTGAAGG+AGG + chr5_2:37569211-37569230 None:intergenic 55.0%
! GGATAGGGAGATGGCACTGA+AGG + chr5_2:37569214-37569233 None:intergenic 55.0%
TAAGAGTGGGGAGGAGGGTA+CGG + chr5_2:37569262-37569281 None:intergenic 55.0%
GAGGATAACCTGCAGGTGGA+GGG + chr5_2:37569318-37569337 None:intergenic 55.0%
GCGTTTGGAGGATAACCTGC+AGG + chr5_2:37569325-37569344 None:intergenic 55.0%
GCAGGTTATCCTCCAAACGC+TGG - chr5_2:37569325-37569344 Msa0769400:CDS 55.0%
GTGTGTCAATATGGCGGTGG+AGG + chr5_2:37569448-37569467 None:intergenic 55.0%
GATTCAAGGCCAGCCTCTCG+AGG - chr5_2:37567942-37567961 Msa0769400:three_prime_UTR 60.0%
GGAGTATGGCTTGAGGAGCC+TGG + chr5_2:37568959-37568978 None:intergenic 60.0%
!! GGGTAAGGTGGTGGTGGTTG+TGG + chr5_2:37569079-37569098 None:intergenic 60.0%
GAAGCAGCAGGGTAAGGTGG+TGG + chr5_2:37569088-37569107 None:intergenic 60.0%
GCGGATAAGAGTGGGGAGGA+GGG + chr5_2:37569267-37569286 None:intergenic 60.0%
!! GATGGCGGATAAGAGTGGGG+AGG + chr5_2:37569271-37569290 None:intergenic 60.0%
!! GGTGGAGGGTATGATGGTGG+TGG + chr5_2:37569304-37569323 None:intergenic 60.0%
! GCAGGTGGAGGGTATGATGG+TGG + chr5_2:37569307-37569326 None:intergenic 60.0%
! CCTGCAGGTGGAGGGTATGA+TGG + chr5_2:37569310-37569329 None:intergenic 60.0%
CCATCATACCCTCCACCTGC+AGG - chr5_2:37569307-37569326 Msa0769400:intron 60.0%
GGAGGATAACCTGCAGGTGG+AGG + chr5_2:37569319-37569338 None:intergenic 60.0%
GATTCAAGGCCAGCCTCTCG+AGG - chr5_2:37567942-37567961 Msa0769400:three_prime_UTR 60.0%
GGAGTATGGCTTGAGGAGCC+TGG + chr5_2:37568959-37568978 None:intergenic 60.0%
!! GGGTAAGGTGGTGGTGGTTG+TGG + chr5_2:37569079-37569098 None:intergenic 60.0%
GAAGCAGCAGGGTAAGGTGG+TGG + chr5_2:37569088-37569107 None:intergenic 60.0%
GCGGATAAGAGTGGGGAGGA+GGG + chr5_2:37569267-37569286 None:intergenic 60.0%
!! GATGGCGGATAAGAGTGGGG+AGG + chr5_2:37569271-37569290 None:intergenic 60.0%
!! GGTGGAGGGTATGATGGTGG+TGG + chr5_2:37569304-37569323 None:intergenic 60.0%
! GCAGGTGGAGGGTATGATGG+TGG + chr5_2:37569307-37569326 None:intergenic 60.0%
! CCTGCAGGTGGAGGGTATGA+TGG + chr5_2:37569310-37569329 None:intergenic 60.0%
CCATCATACCCTCCACCTGC+AGG - chr5_2:37569307-37569326 Msa0769400:intron 60.0%
GGAGGATAACCTGCAGGTGG+AGG + chr5_2:37569319-37569338 None:intergenic 60.0%
GGCCAGCCTCTCGAGGTTAC+TGG - chr5_2:37567949-37567968 Msa0769400:three_prime_UTR 65.0%
! GCAGCAGGGTAAGGTGGTGG+TGG + chr5_2:37569085-37569104 None:intergenic 65.0%
! TGGGGAGGAGGGTACGGTGA+TGG + chr5_2:37569256-37569275 None:intergenic 65.0%
GGCGGATAAGAGTGGGGAGG+AGG + chr5_2:37569268-37569287 None:intergenic 65.0%
GGCCAGCCTCTCGAGGTTAC+TGG - chr5_2:37567949-37567968 Msa0769400:three_prime_UTR 65.0%
! GCAGCAGGGTAAGGTGGTGG+TGG + chr5_2:37569085-37569104 None:intergenic 65.0%
! TGGGGAGGAGGGTACGGTGA+TGG + chr5_2:37569256-37569275 None:intergenic 65.0%
GGCGGATAAGAGTGGGGAGG+AGG + chr5_2:37569268-37569287 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 37567859 37569859 37567859 ID=Msa0769400;Name=Msa0769400
chr5_2 mRNA 37567859 37569859 37567859 ID=Msa0769400-mRNA-1;Parent=Msa0769400;Name=Msa0769400-mRNA-1;_AED=0.09;_eAED=0.09;_QI=69|1|1|1|1|1|7|397|278
chr5_2 exon 37567859 37568281 37567859 ID=Msa0769400-mRNA-1:exon:12358;Parent=Msa0769400-mRNA-1
chr5_2 exon 37568372 37568765 37568372 ID=Msa0769400-mRNA-1:exon:12357;Parent=Msa0769400-mRNA-1
chr5_2 exon 37568867 37568936 37568867 ID=Msa0769400-mRNA-1:exon:12356;Parent=Msa0769400-mRNA-1
chr5_2 exon 37569163 37569234 37569163 ID=Msa0769400-mRNA-1:exon:12355;Parent=Msa0769400-mRNA-1
chr5_2 exon 37569325 37569451 37569325 ID=Msa0769400-mRNA-1:exon:12354;Parent=Msa0769400-mRNA-1
chr5_2 exon 37569554 37569658 37569554 ID=Msa0769400-mRNA-1:exon:12353;Parent=Msa0769400-mRNA-1
chr5_2 exon 37569748 37569859 37569748 ID=Msa0769400-mRNA-1:exon:12352;Parent=Msa0769400-mRNA-1
chr5_2 five_prime_UTR 37569791 37569859 37569791 ID=Msa0769400-mRNA-1:five_prime_utr;Parent=Msa0769400-mRNA-1
chr5_2 CDS 37569748 37569790 37569748 ID=Msa0769400-mRNA-1:cds;Parent=Msa0769400-mRNA-1
chr5_2 CDS 37569554 37569658 37569554 ID=Msa0769400-mRNA-1:cds;Parent=Msa0769400-mRNA-1
chr5_2 CDS 37569325 37569451 37569325 ID=Msa0769400-mRNA-1:cds;Parent=Msa0769400-mRNA-1
chr5_2 CDS 37569163 37569234 37569163 ID=Msa0769400-mRNA-1:cds;Parent=Msa0769400-mRNA-1
chr5_2 CDS 37568867 37568936 37568867 ID=Msa0769400-mRNA-1:cds;Parent=Msa0769400-mRNA-1
chr5_2 CDS 37568372 37568765 37568372 ID=Msa0769400-mRNA-1:cds;Parent=Msa0769400-mRNA-1
chr5_2 CDS 37568256 37568281 37568256 ID=Msa0769400-mRNA-1:cds;Parent=Msa0769400-mRNA-1
chr5_2 three_prime_UTR 37567859 37568255 37567859 ID=Msa0769400-mRNA-1:three_prime_utr;Parent=Msa0769400-mRNA-1
Gene Sequence

>Msa0769400

ATGATGATGTCTGGGATTCAAGGCCAGCCTCTCGAGGTTACTGTCGTTTCTTGCTCGAAATTGAAAGACACTGAATGGATTTCAAGACAAGATCCCTACGTTTGCATCGAATACGCTTCCACCAAGTTCCGAACAAGAACATGCACTGACGGCGGAAAAAACCCTGTATTTCAAGAGAAGTTCATACTTCCCCTAATTGAAGGCCTTCGTGAGATCAATGTTGTCGTTTGGAACAGCAATACCGTCACCTTCGATGATTTTATCGGCACCGGAAAGGTTCAATTACACAAAGTTCTCTCTCAAGGTTTTGACGACTCTTCTTGGCCACTTCAAACTAAAACTGGCAGACACGCAGGCGAAGTAAAACTCATACTGCATTATGCCAGTGCCAGTGCCAATGCCAAAGTGAATCACCAGAAACCAGGCTCCTCAAGCCATACTCCCTATACAGCAGTCCCATCATATAATCCTGTTCCTTCCTACTACCCACAACAACCACACTCTAATTATCACCATCCAACAACACCTGCTGTTGCTTATCCACAACCACCACCACCTTACCCTGCTGCTTCACATTCACATAATCCATCTTCTTATCCACCATCCTCAACATATCCATACCCTCAATCAGTGTCATCTCCCTATCCACCACCCTCATCATCATCACCATACCCTCCTTCAGTGCCATCTCCCTATCCACCAACTTCATCATCATCACCATCACCGTACCCTCCTCCCCACTCTTATCCGCCATCTTCAGCTTATCCACCACCATCATACCCTCCACCTGCAGGTTATCCTCCAAACGCTGGATTCTACCCTCCACCGCCATATTGA
Protein sequence

>Msa0769400

MMMSGIQGQPLEVTVVSCSKLKDTEWISRQDPYVCIEYASTKFRTRTCTDGGKNPVFQEKFILPLIEGLREINVVVWNSNTVTFDDFIGTGKVQLHKVLSQGFDDSSWPLQTKTGRHAGEVKLILHYASASANAKVNHQKPGSSSHTPYTAVPSYNPVPSYYPQQPHSNYHHPTTPAVAYPQPPPPYPAASHSHNPSSYPPSSTYPYPQSVSSPYPPPSSSSPYPPSVPSPYPPTSSSSPSPYPPPHSYPPSSAYPPPSYPPPAGYPPNAGFYPPPPY*