Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0108350 | XP_003589749.1 | 93.137 | 306 | 7 | 2 | 1 | 293 | 1 | 305 | 0.0 | 577 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0108350 | sp|Q9SIS4|IP5P9_ARATH | 62.718 | 287 | 98 | 2 | 9 | 293 | 1 | 280 | 6.84e-122 | 358 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0108350 | G7IBG6 | 93.137 | 306 | 7 | 2 | 1 | 293 | 1 | 305 | 0.0 | 577 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0010150 | Msa0108350 | 0.833861 | 4.180476e-56 | -8.615850e-47 |
Msa0013040 | Msa0108350 | 0.834313 | 3.221509e-56 | -8.615850e-47 |
Msa0013270 | Msa0108350 | 0.819420 | 1.172314e-52 | -8.615850e-47 |
Msa0014590 | Msa0108350 | 0.878184 | 3.448388e-69 | -8.615850e-47 |
Msa0017710 | Msa0108350 | 0.820432 | 6.879152e-53 | -8.615850e-47 |
Msa0024280 | Msa0108350 | 0.800603 | 1.333863e-48 | -8.615850e-47 |
Msa0025570 | Msa0108350 | 0.805209 | 1.490529e-49 | -8.615850e-47 |
Msa0025700 | Msa0108350 | 0.812377 | 4.371606e-51 | -8.615850e-47 |
Msa0043120 | Msa0108350 | 0.804225 | 2.392059e-49 | -8.615850e-47 |
Msa0043150 | Msa0108350 | 0.801465 | 8.890708e-49 | -8.615850e-47 |
Msa0059880 | Msa0108350 | 0.826867 | 2.143302e-54 | -8.615850e-47 |
Msa0062010 | Msa0108350 | 0.836313 | 1.006678e-56 | -8.615850e-47 |
Msa0063540 | Msa0108350 | 0.869611 | 2.719236e-66 | -8.615850e-47 |
Msa0073110 | Msa0108350 | 0.810814 | 9.559317e-51 | -8.615850e-47 |
Msa0106540 | Msa0108350 | 0.813829 | 2.099437e-51 | -8.615850e-47 |
Msa0108350 | Msa0120050 | 0.801733 | 7.832214e-49 | -8.615850e-47 |
Msa0108350 | Msa0121320 | 0.804554 | 2.042809e-49 | -8.615850e-47 |
Msa0108350 | Msa0125600 | 0.825468 | 4.610646e-54 | -8.615850e-47 |
Msa0108350 | Msa0129150 | 0.802136 | 6.474461e-49 | -8.615850e-47 |
Msa0108350 | Msa0134570 | 0.803074 | 4.145880e-49 | -8.615850e-47 |
Msa0108350 | Msa0142560 | 0.811246 | 7.706271e-51 | -8.615850e-47 |
Msa0108350 | Msa0150910 | 0.842554 | 2.408803e-58 | -8.615850e-47 |
Msa0108350 | Msa0150920 | 0.837310 | 5.606535e-57 | -8.615850e-47 |
Msa0108350 | Msa0154460 | 0.902319 | 1.095199e-78 | -8.615850e-47 |
Msa0108350 | Msa0163340 | 0.830760 | 2.449235e-55 | -8.615850e-47 |
Msa0108350 | Msa0166180 | 0.809246 | 2.080789e-50 | -8.615850e-47 |
Msa0108350 | Msa0190670 | 0.859396 | 4.256777e-63 | -8.615850e-47 |
Msa0108350 | Msa0190890 | 0.842000 | 3.376301e-58 | -8.615850e-47 |
Msa0108350 | Msa0195580 | 0.818827 | 1.599920e-52 | -8.615850e-47 |
Msa0108350 | Msa0196260 | 0.824776 | 6.719609e-54 | -8.615850e-47 |
Msa0108350 | Msa0207640 | 0.809556 | 1.784899e-50 | -8.615850e-47 |
Msa0108350 | Msa0212550 | 0.821893 | 3.169433e-53 | -8.615850e-47 |
Msa0108350 | Msa0216760 | 0.809339 | 1.987346e-50 | -8.615850e-47 |
Msa0108350 | Msa0220090 | 0.834560 | 2.793185e-56 | -8.615850e-47 |
Msa0108350 | Msa0233210 | 0.836540 | 8.816321e-57 | -8.615850e-47 |
Msa0108350 | Msa0236940 | 0.804820 | 1.798231e-49 | -8.615850e-47 |
Msa0108350 | Msa0237380 | 0.815343 | 9.703183e-52 | -8.615850e-47 |
Msa0108350 | Msa0238110 | 0.828804 | 7.332824e-55 | -8.615850e-47 |
Msa0108350 | Msa0242830 | 0.805439 | 1.333964e-49 | -8.615850e-47 |
Msa0108350 | Msa0251120 | 0.832575 | 8.740527e-56 | -8.615850e-47 |
Msa0108350 | Msa0252930 | 0.813740 | 2.196782e-51 | -8.615850e-47 |
Msa0108350 | Msa0261400 | 0.845333 | 4.335798e-59 | -8.615850e-47 |
Msa0108350 | Msa0269240 | 0.821467 | 3.974945e-53 | -8.615850e-47 |
Msa0108350 | Msa0272210 | 0.834563 | 2.788727e-56 | -8.615850e-47 |
Msa0108350 | Msa0273610 | 0.810374 | 1.189632e-50 | -8.615850e-47 |
Msa0108350 | Msa0274250 | 0.819565 | 1.086401e-52 | -8.615850e-47 |
Msa0108350 | Msa0277520 | 0.836082 | 1.152553e-56 | -8.615850e-47 |
Msa0108350 | Msa0278460 | 0.813363 | 2.658665e-51 | -8.615850e-47 |
Msa0108350 | Msa0278480 | 0.823901 | 1.079071e-53 | -8.615850e-47 |
Msa0108350 | Msa0278950 | 0.805017 | 1.635246e-49 | -8.615850e-47 |
Msa0108350 | Msa0281190 | 0.828561 | 8.394553e-55 | -8.615850e-47 |
Msa0108350 | Msa0295980 | 0.805793 | 1.124599e-49 | -8.615850e-47 |
Msa0108350 | Msa0299030 | 0.846401 | 2.223029e-59 | -8.615850e-47 |
Msa0108350 | Msa0303920 | 0.814716 | 1.336993e-51 | -8.615850e-47 |
Msa0108350 | Msa0307630 | 0.806951 | 6.410470e-50 | -8.615850e-47 |
Msa0108350 | Msa0312540 | 0.807020 | 6.197973e-50 | -8.615850e-47 |
Msa0108350 | Msa0313830 | 0.805570 | 1.252660e-49 | -8.615850e-47 |
Msa0108350 | Msa0314440 | 0.813714 | 2.225193e-51 | -8.615850e-47 |
Msa0108350 | Msa0316020 | 0.833617 | 4.810667e-56 | -8.615850e-47 |
Msa0108350 | Msa0319690 | 0.810187 | 1.305825e-50 | -8.615850e-47 |
Msa0108350 | Msa0328090 | 0.826305 | 2.917716e-54 | -8.615850e-47 |
Msa0108350 | Msa0328100 | 0.831951 | 1.247394e-55 | -8.615850e-47 |
Msa0108350 | Msa0342660 | 0.816323 | 5.868509e-52 | -8.615850e-47 |
Msa0108350 | Msa0343720 | 0.802923 | 4.455457e-49 | -8.615850e-47 |
Msa0108350 | Msa0348370 | 0.800263 | 1.564138e-48 | -8.615850e-47 |
Msa0108350 | Msa0349100 | 0.805915 | 1.059765e-49 | -8.615850e-47 |
Msa0108350 | Msa0349910 | 0.843417 | 1.419182e-58 | -8.615850e-47 |
Msa0108350 | Msa0349930 | 0.841670 | 4.127275e-58 | -8.615850e-47 |
Msa0108350 | Msa0366510 | 0.821014 | 5.057116e-53 | -8.615850e-47 |
Msa0108350 | Msa0367340 | 0.816839 | 4.495521e-52 | -8.615850e-47 |
Msa0108350 | Msa0370620 | 0.801771 | 7.693034e-49 | -8.615850e-47 |
Msa0108350 | Msa0374040 | 0.820999 | 5.096439e-53 | -8.615850e-47 |
Msa0108350 | Msa0379480 | 0.811856 | 5.679431e-51 | -8.615850e-47 |
Msa0108350 | Msa0380680 | 0.805622 | 1.221279e-49 | -8.615850e-47 |
Msa0108350 | Msa0386910 | 0.809428 | 1.901792e-50 | -8.615850e-47 |
Msa0108350 | Msa0396860 | 0.846639 | 1.914759e-59 | -8.615850e-47 |
Msa0108350 | Msa0424540 | 0.804536 | 2.060990e-49 | -8.615850e-47 |
Msa0108350 | Msa0444210 | 0.814465 | 1.519837e-51 | -8.615850e-47 |
Msa0108350 | Msa0448310 | 0.801893 | 7.262166e-49 | -8.615850e-47 |
Msa0108350 | Msa0457070 | -0.802106 | 6.565309e-49 | -8.615850e-47 |
Msa0108350 | Msa0464310 | 0.806694 | 7.263815e-50 | -8.615850e-47 |
Msa0108350 | Msa0469450 | 0.818043 | 2.407689e-52 | -8.615850e-47 |
Msa0108350 | Msa0475330 | 0.801719 | 7.886765e-49 | -8.615850e-47 |
Msa0108350 | Msa0491770 | 0.832027 | 1.194377e-55 | -8.615850e-47 |
Msa0108350 | Msa0491830 | 0.810349 | 1.204568e-50 | -8.615850e-47 |
Msa0108350 | Msa0515150 | 0.810022 | 1.416789e-50 | -8.615850e-47 |
Msa0108350 | Msa0523720 | 0.826652 | 2.412400e-54 | -8.615850e-47 |
Msa0108350 | Msa0535570 | 0.845054 | 5.157386e-59 | -8.615850e-47 |
Msa0108350 | Msa0549170 | 0.805995 | 1.019640e-49 | -8.615850e-47 |
Msa0108350 | Msa0549920 | 0.818456 | 1.941968e-52 | -8.615850e-47 |
Msa0108350 | Msa0555920 | 0.818957 | 1.494197e-52 | -8.615850e-47 |
Msa0108350 | Msa0569100 | 0.811544 | 6.640766e-51 | -8.615850e-47 |
Msa0108350 | Msa0579530 | 0.824030 | 1.006617e-53 | -8.615850e-47 |
Msa0108350 | Msa0580100 | 0.831109 | 2.011098e-55 | -8.615850e-47 |
Msa0108350 | Msa0583390 | 0.805266 | 1.450720e-49 | -8.615850e-47 |
Msa0108350 | Msa0584370 | 0.816838 | 4.498204e-52 | -8.615850e-47 |
Msa0108350 | Msa0591490 | 0.822042 | 2.926977e-53 | -8.615850e-47 |
Msa0108350 | Msa0594630 | 0.821964 | 3.051472e-53 | -8.615850e-47 |
Msa0108350 | Msa0602050 | 0.812608 | 3.891006e-51 | -8.615850e-47 |
Msa0108350 | Msa0604200 | 0.814419 | 1.555877e-51 | -8.615850e-47 |
Msa0108350 | Msa0609460 | 0.822949 | 1.801402e-53 | -8.615850e-47 |
Msa0108350 | Msa0610190 | 0.810962 | 8.879482e-51 | -8.615850e-47 |
Msa0108350 | Msa0616300 | 0.822510 | 2.278919e-53 | -8.615850e-47 |
Msa0108350 | Msa0624930 | 0.801903 | 7.228372e-49 | -8.615850e-47 |
Msa0108350 | Msa0631700 | 0.819653 | 1.037423e-52 | -8.615850e-47 |
Msa0108350 | Msa0643190 | 0.802486 | 5.482743e-49 | -8.615850e-47 |
Msa0108350 | Msa0643840 | 0.829974 | 3.812273e-55 | -8.615850e-47 |
Msa0108350 | Msa0645370 | 0.804054 | 2.596617e-49 | -8.615850e-47 |
Msa0108350 | Msa0650100 | 0.812731 | 3.657169e-51 | -8.615850e-47 |
Msa0108350 | Msa0655800 | 0.827876 | 1.228028e-54 | -8.615850e-47 |
Msa0108350 | Msa0670360 | 0.837955 | 3.829505e-57 | -8.615850e-47 |
Msa0108350 | Msa0671400 | 0.809435 | 1.894887e-50 | -8.615850e-47 |
Msa0108350 | Msa0671640 | 0.830339 | 3.105167e-55 | -8.615850e-47 |
Msa0108350 | Msa0692090 | 0.803001 | 4.292343e-49 | -8.615850e-47 |
Msa0108350 | Msa0711260 | 0.847669 | 9.988703e-60 | -8.615850e-47 |
Msa0108350 | Msa0715220 | 0.823341 | 1.458965e-53 | -8.615850e-47 |
Msa0108350 | Msa0727480 | 0.809434 | 1.895722e-50 | -8.615850e-47 |
Msa0108350 | Msa0733560 | 0.803556 | 3.294825e-49 | -8.615850e-47 |
Msa0108350 | Msa0735140 | 0.806062 | 9.873398e-50 | -8.615850e-47 |
Msa0108350 | Msa0739720 | 0.824059 | 9.910164e-54 | -8.615850e-47 |
Msa0108350 | Msa0751960 | 0.821482 | 3.943457e-53 | -8.615850e-47 |
Msa0108350 | Msa0757120 | 0.824083 | 9.782261e-54 | -8.615850e-47 |
Msa0108350 | Msa0768670 | 0.820726 | 5.891540e-53 | -8.615850e-47 |
Msa0108350 | Msa0768720 | 0.828501 | 8.679510e-55 | -8.615850e-47 |
Msa0108350 | Msa0773960 | 0.801099 | 1.056498e-48 | -8.615850e-47 |
Msa0108350 | Msa0774660 | 0.808680 | 2.749691e-50 | -8.615850e-47 |
Msa0108350 | Msa0777060 | 0.821058 | 4.940988e-53 | -8.615850e-47 |
Msa0108350 | Msa0777070 | 0.816349 | 5.789210e-52 | -8.615850e-47 |
Msa0108350 | Msa0786940 | 0.808355 | 3.225806e-50 | -8.615850e-47 |
Msa0108350 | Msa0787860 | 0.809464 | 1.867821e-50 | -8.615850e-47 |
Msa0108350 | Msa0789210 | 0.810120 | 1.349837e-50 | -8.615850e-47 |
Msa0108350 | Msa0789220 | 0.820889 | 5.402011e-53 | -8.615850e-47 |
Msa0108350 | Msa0792410 | 0.808665 | 2.770219e-50 | -8.615850e-47 |
Msa0108350 | Msa0802600 | 0.814437 | 1.541464e-51 | -8.615850e-47 |
Msa0108350 | Msa0803170 | 0.813208 | 2.874947e-51 | -8.615850e-47 |
Msa0108350 | Msa0804170 | 0.832872 | 7.377473e-56 | -8.615850e-47 |
Msa0108350 | Msa0806930 | 0.840298 | 9.460066e-58 | -8.615850e-47 |
Msa0108350 | Msa0812220 | 0.814829 | 1.261934e-51 | -8.615850e-47 |
Msa0108350 | Msa0814160 | 0.876350 | 1.497090e-68 | -8.615850e-47 |
Msa0108350 | Msa0814230 | 0.803987 | 2.680939e-49 | -8.615850e-47 |
Msa0108350 | Msa0816140 | 0.829084 | 6.274348e-55 | -8.615850e-47 |
Msa0108350 | Msa0822410 | 0.844852 | 5.849137e-59 | -8.615850e-47 |
Msa0108350 | Msa0824850 | 0.829733 | 4.362919e-55 | -8.615850e-47 |
Msa0108350 | Msa0831890 | 0.841416 | 4.814435e-58 | -8.615850e-47 |
Msa0108350 | Msa0841520 | 0.800756 | 1.241584e-48 | -8.615850e-47 |
Msa0108350 | Msa0842180 | 0.802760 | 4.814660e-49 | -8.615850e-47 |
Msa0108350 | Msa0854840 | 0.849459 | 3.190488e-60 | -8.615850e-47 |
Msa0108350 | Msa0859270 | 0.800443 | 1.437499e-48 | -8.615850e-47 |
Msa0108350 | Msa0861730 | 0.856712 | 2.673556e-62 | -8.615850e-47 |
Msa0108350 | Msa0863840 | 0.803125 | 4.047362e-49 | -8.615850e-47 |
Msa0108350 | Msa0863850 | 0.808362 | 3.214318e-50 | -8.615850e-47 |
Msa0108350 | Msa0863860 | 0.820308 | 7.345214e-53 | -8.615850e-47 |
Msa0108350 | Msa0864160 | 0.828793 | 7.379372e-55 | -8.615850e-47 |
Msa0108350 | Msa0893840 | 0.849664 | 2.796088e-60 | -8.615850e-47 |
Msa0108350 | Msa0896920 | 0.802403 | 5.705256e-49 | -8.615850e-47 |
Msa0108350 | Msa0898830 | -0.800335 | 1.512441e-48 | -8.615850e-47 |
Msa0108350 | Msa0910830 | 0.801269 | 9.749731e-49 | -8.615850e-47 |
Msa0108350 | Msa0913550 | 0.804831 | 1.788067e-49 | -8.615850e-47 |
Msa0108350 | Msa0921180 | 0.802206 | 6.261324e-49 | -8.615850e-47 |
Msa0108350 | Msa0921790 | 0.801950 | 7.068665e-49 | -8.615850e-47 |
Msa0108350 | Msa0930210 | 0.800337 | 1.510953e-48 | -8.615850e-47 |
Msa0108350 | Msa0932140 | 0.810518 | 1.107535e-50 | -8.615850e-47 |
Msa0108350 | Msa0932150 | 0.819741 | 9.906857e-53 | -8.615850e-47 |
Msa0108350 | Msa0932930 | 0.807716 | 4.411354e-50 | -8.615850e-47 |
Msa0108350 | Msa0933590 | 0.801804 | 7.574249e-49 | -8.615850e-47 |
Msa0108350 | Msa0933610 | 0.804267 | 2.344800e-49 | -8.615850e-47 |
Msa0108350 | Msa0946010 | 0.806147 | 9.474803e-50 | -8.615850e-47 |
Msa0108350 | Msa0951150 | 0.811011 | 8.664861e-51 | -8.615850e-47 |
Msa0108350 | Msa0956450 | 0.805033 | 1.622469e-49 | -8.615850e-47 |
Msa0108350 | Msa0959340 | 0.805010 | 1.640950e-49 | -8.615850e-47 |
Msa0108350 | Msa0960580 | 0.807171 | 5.757128e-50 | -8.615850e-47 |
Msa0108350 | Msa0967900 | -0.804554 | 2.043553e-49 | -8.615850e-47 |
Msa0108350 | Msa0970270 | 0.821216 | 4.541892e-53 | -8.615850e-47 |
Msa0108350 | Msa0987640 | 0.812126 | 4.959694e-51 | -8.615850e-47 |
Msa0108350 | Msa0993450 | 0.805251 | 1.460689e-49 | -8.615850e-47 |
Msa0108350 | Msa1003110 | 0.800039 | 1.737709e-48 | -8.615850e-47 |
Msa0108350 | Msa1006170 | 0.862019 | 6.816925e-64 | -8.615850e-47 |
Msa0108350 | Msa1006220 | 0.804073 | 2.572999e-49 | -8.615850e-47 |
Msa0108350 | Msa1009540 | 0.806335 | 8.645719e-50 | -8.615850e-47 |
Msa0108350 | Msa1018590 | 0.820792 | 5.688723e-53 | -8.615850e-47 |
Msa0108350 | Msa1021620 | 0.813236 | 2.834671e-51 | -8.615850e-47 |
Msa0108350 | Msa1022490 | 0.816053 | 6.743637e-52 | -8.615850e-47 |
Msa0108350 | Msa1022510 | 0.825175 | 5.410849e-54 | -8.615850e-47 |
Msa0108350 | Msa1024350 | 0.824000 | 1.023103e-53 | -8.615850e-47 |
Msa0108350 | Msa1029780 | 0.806241 | 9.053129e-50 | -8.615850e-47 |
Msa0108350 | Msa1029860 | 0.821114 | 4.796151e-53 | -8.615850e-47 |
Msa0108350 | Msa1030320 | 0.839883 | 1.213633e-57 | -8.615850e-47 |
Msa0108350 | Msa1041910 | 0.805022 | 1.631419e-49 | -8.615850e-47 |
Msa0108350 | Msa1048350 | 0.822627 | 2.141311e-53 | -8.615850e-47 |
Msa0108350 | Msa1055450 | 0.832469 | 9.286206e-56 | -8.615850e-47 |
Msa0108350 | Msa1061670 | 0.815793 | 7.705335e-52 | -8.615850e-47 |
Msa0108350 | Msa1064940 | 0.817755 | 2.797137e-52 | -8.615850e-47 |
Msa0108350 | Msa1066150 | 0.803231 | 3.846780e-49 | -8.615850e-47 |
Msa0108350 | Msa1068730 | 0.831401 | 1.704627e-55 | -8.615850e-47 |
Msa0108350 | Msa1068780 | 0.808727 | 2.686304e-50 | -8.615850e-47 |
Msa0108350 | Msa1075320 | 0.803637 | 3.169441e-49 | -8.615850e-47 |
Msa0108350 | Msa1079820 | 0.836228 | 1.058157e-56 | -8.615850e-47 |
Msa0108350 | Msa1087370 | 0.814438 | 1.540362e-51 | -8.615850e-47 |
Msa0108350 | Msa1087380 | 0.805497 | 1.297528e-49 | -8.615850e-47 |
Msa0108350 | Msa1090150 | 0.810817 | 9.546186e-51 | -8.615850e-47 |
Msa0108350 | Msa1100030 | 0.824246 | 8.953779e-54 | -8.615850e-47 |
Msa0108350 | Msa1106680 | 0.836566 | 8.680933e-57 | -8.615850e-47 |
Msa0108350 | Msa1106960 | 0.800198 | 1.613050e-48 | -8.615850e-47 |
Msa0108350 | Msa1108560 | 0.806661 | 7.382660e-50 | -8.615850e-47 |
Msa0108350 | Msa1109880 | 0.806128 | 9.562896e-50 | -8.615850e-47 |
Msa0108350 | Msa1138110 | 0.802450 | 5.577898e-49 | -8.615850e-47 |
Msa0108350 | Msa1147010 | 0.803508 | 3.371506e-49 | -8.615850e-47 |
Msa0108350 | Msa1147030 | 0.826692 | 2.359525e-54 | -8.615850e-47 |
Msa0108350 | Msa1148210 | 0.803039 | 4.215597e-49 | -8.615850e-47 |
Msa0108350 | Msa1149020 | 0.802006 | 6.884618e-49 | -8.615850e-47 |
Msa0108350 | Msa1156240 | 0.806613 | 7.556251e-50 | -8.615850e-47 |
Msa0108350 | Msa1156740 | 0.804390 | 2.210774e-49 | -8.615850e-47 |
Msa0108350 | Msa1157210 | 0.824020 | 1.012122e-53 | -8.615850e-47 |
Msa0108350 | Msa1162750 | 0.802180 | 6.339273e-49 | -8.615850e-47 |
Msa0108350 | Msa1167960 | 0.806401 | 8.373078e-50 | -8.615850e-47 |
Msa0108350 | Msa1170320 | 0.809702 | 1.660224e-50 | -8.615850e-47 |
Msa0108350 | Msa1170340 | 0.832014 | 1.203838e-55 | -8.615850e-47 |
Msa0108350 | Msa1181090 | 0.847235 | 1.314888e-59 | -8.615850e-47 |
Msa0108350 | Msa1187900 | 0.801603 | 8.331271e-49 | -8.615850e-47 |
Msa0108350 | Msa1191640 | 0.810152 | 1.328509e-50 | -8.615850e-47 |
Msa0108350 | Msa1223990 | 0.804807 | 1.809393e-49 | -8.615850e-47 |
Msa0108350 | Msa1225890 | 0.807417 | 5.106327e-50 | -8.615850e-47 |
Msa0108350 | Msa1231720 | 0.816382 | 5.691687e-52 | -8.615850e-47 |
Msa0108350 | Msa1236860 | -0.815642 | 8.325996e-52 | -8.615850e-47 |
Msa0108350 | Msa1263110 | 0.807551 | 4.782006e-50 | -8.615850e-47 |
Msa0108350 | Msa1263120 | 0.804245 | 2.369163e-49 | -8.615850e-47 |
Msa0108350 | Msa1286420 | 0.831732 | 1.412532e-55 | -8.615850e-47 |
Msa0108350 | Msa1297220 | -0.802953 | 4.392532e-49 | -8.615850e-47 |
Msa0108350 | Msa1300610 | 0.816461 | 5.466051e-52 | -8.615850e-47 |
Msa0108350 | Msa1313840 | 0.810004 | 1.429705e-50 | -8.615850e-47 |
Msa0108350 | Msa1314030 | 0.814252 | 1.693789e-51 | -8.615850e-47 |
Msa0108350 | Msa1316870 | 0.803698 | 3.079052e-49 | -8.615850e-47 |
Msa0108350 | Msa1321970 | 0.801284 | 9.681453e-49 | -8.615850e-47 |
Msa0108350 | Msa1322500 | 0.800184 | 1.623060e-48 | -8.615850e-47 |
Msa0108350 | Msa1323120 | 0.844650 | 6.629533e-59 | -8.615850e-47 |
Msa0108350 | Msa1323260 | -0.801771 | 7.692396e-49 | -8.615850e-47 |
Msa0108350 | Msa1329740 | 0.822377 | 2.447379e-53 | -8.615850e-47 |
Msa0108350 | Msa1335100 | 0.817824 | 2.699255e-52 | -8.615850e-47 |
Msa0108350 | Msa1355340 | 0.809192 | 2.136787e-50 | -8.615850e-47 |
Msa0108350 | Msa1357860 | 0.845699 | 3.450424e-59 | -8.615850e-47 |
Msa0108350 | Msa1361980 | 0.806146 | 9.479954e-50 | -8.615850e-47 |
Msa0108350 | Msa1364190 | 0.812629 | 3.849929e-51 | -8.615850e-47 |
Msa0108350 | Msa1368420 | 0.811983 | 5.328567e-51 | -8.615850e-47 |
Msa0108350 | Msa1376070 | 0.805419 | 1.347311e-49 | -8.615850e-47 |
Msa0108350 | Msa1377520 | 0.812691 | 3.732768e-51 | -8.615850e-47 |
Msa0108350 | Msa1383220 | 0.811105 | 8.266167e-51 | -8.615850e-47 |
Msa0108350 | Msa1387480 | 0.816983 | 4.173926e-52 | -8.615850e-47 |
Msa0108350 | Msa1387530 | 0.809211 | 2.116521e-50 | -8.615850e-47 |
Msa0108350 | Msa1402390 | 0.800734 | 1.254066e-48 | -8.615850e-47 |
Msa0108350 | Msa1405830 | 0.813322 | 2.714867e-51 | -8.615850e-47 |
Msa0108350 | Msa1406840 | 0.841439 | 4.748706e-58 | -8.615850e-47 |
Msa0108350 | Msa1407670 | 0.840853 | 6.771048e-58 | -8.615850e-47 |
Msa0108350 | Msa1411550 | 0.825317 | 5.008327e-54 | -8.615850e-47 |
Msa0108350 | Msa1413020 | 0.832659 | 8.332605e-56 | -8.615850e-47 |
Msa0108350 | Msa1421130 | 0.831083 | 2.040592e-55 | -8.615850e-47 |
Msa0108350 | Msa1429550 | 0.812710 | 3.697539e-51 | -8.615850e-47 |
Msa0108350 | Msa1441450 | 0.822123 | 2.802695e-53 | -8.615850e-47 |
Msa0108350 | Msa1449770 | 0.843865 | 1.077501e-58 | -8.615850e-47 |
Msa0108350 | Msa1451660 | 0.813146 | 2.966551e-51 | -8.615850e-47 |
Msa0108350 | Msa1455360 | 0.802448 | 5.584530e-49 | -8.615850e-47 |
Msa0108350 | Msa1459610 | 0.838864 | 2.231596e-57 | -8.615850e-47 |
Msa0108350 | Msa1461660 | 0.807324 | 5.343028e-50 | -8.615850e-47 |
Msa0108350 | Msa1462610 | 0.805228 | 1.477077e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0108350 | MtrunA17_Chr1g0165011 | 93.137 | 306 | 7 | 2 | 1 | 293 | 1 | 305 | 0.0 | 577 |
Msa0108350 | MtrunA17_Chr8g0375751 | 66.084 | 286 | 78 | 4 | 9 | 293 | 7 | 274 | 1.30e-126 | 367 |
Msa0108350 | MtrunA17_Chr6g0479511 | 46.429 | 280 | 110 | 3 | 40 | 293 | 15 | 280 | 4.67e-80 | 247 |
Msa0108350 | MtrunA17_Chr7g0263111 | 40.134 | 299 | 130 | 8 | 10 | 284 | 11 | 284 | 3.70e-58 | 192 |
Msa0108350 | MtrunA17_Chr6g0452181 | 42.339 | 248 | 123 | 7 | 61 | 293 | 53 | 295 | 4.96e-53 | 179 |
Msa0108350 | MtrunA17_Chr8g0382571 | 57.937 | 126 | 50 | 1 | 171 | 293 | 219 | 344 | 6.94e-41 | 147 |
Msa0108350 | MtrunA17_Chr8g0382571 | 48.780 | 82 | 41 | 1 | 53 | 134 | 28 | 108 | 1.45e-17 | 82.4 |
Msa0108350 | MtrunA17_Chr5g0394901 | 55.556 | 126 | 53 | 1 | 171 | 293 | 360 | 485 | 2.13e-40 | 148 |
Msa0108350 | MtrunA17_Chr5g0394901 | 54.667 | 75 | 33 | 1 | 60 | 134 | 90 | 163 | 2.91e-18 | 84.7 |
Msa0108350 | MtrunA17_Chr1g0185281 | 55.556 | 126 | 53 | 1 | 171 | 293 | 294 | 419 | 3.21e-40 | 147 |
Msa0108350 | MtrunA17_Chr1g0185281 | 36.025 | 161 | 67 | 4 | 4 | 134 | 7 | 161 | 2.46e-19 | 87.8 |
Msa0108350 | MtrunA17_Chr1g0205121 | 54.762 | 126 | 54 | 1 | 171 | 293 | 321 | 446 | 8.93e-40 | 146 |
Msa0108350 | MtrunA17_Chr1g0205121 | 40.984 | 122 | 59 | 4 | 22 | 134 | 44 | 161 | 2.14e-19 | 88.2 |
Msa0108350 | MtrunA17_Chr6g0466801 | 60.000 | 115 | 46 | 0 | 171 | 285 | 375 | 489 | 3.56e-39 | 145 |
Msa0108350 | MtrunA17_Chr6g0466801 | 40.367 | 109 | 54 | 3 | 60 | 158 | 94 | 201 | 4.59e-17 | 81.3 |
Msa0108350 | MtrunA17_Chr1g0201271 | 54.472 | 123 | 56 | 0 | 171 | 293 | 377 | 499 | 3.69e-39 | 145 |
Msa0108350 | MtrunA17_Chr1g0201271 | 37.705 | 122 | 65 | 4 | 20 | 135 | 56 | 172 | 4.30e-15 | 75.5 |
Msa0108350 | MtrunA17_Chr7g0260081 | 53.968 | 126 | 55 | 1 | 171 | 293 | 294 | 419 | 2.82e-38 | 141 |
Msa0108350 | MtrunA17_Chr7g0260081 | 36.538 | 156 | 74 | 4 | 3 | 134 | 7 | 161 | 1.07e-19 | 89.0 |
Msa0108350 | MtrunA17_Chr8g0355021 | 53.175 | 126 | 56 | 1 | 171 | 293 | 233 | 358 | 1.30e-37 | 139 |
Msa0108350 | MtrunA17_Chr8g0355021 | 45.238 | 84 | 45 | 1 | 51 | 134 | 49 | 131 | 1.09e-15 | 77.0 |
Msa0108350 | MtrunA17_Chr4g0054941 | 51.220 | 123 | 60 | 0 | 171 | 293 | 316 | 438 | 3.09e-34 | 130 |
Msa0108350 | MtrunA17_Chr4g0054941 | 38.000 | 150 | 76 | 3 | 1 | 137 | 1 | 146 | 1.85e-20 | 91.3 |
Msa0108350 | MtrunA17_Chr4g0054951 | 51.240 | 121 | 59 | 0 | 171 | 291 | 316 | 436 | 6.87e-34 | 129 |
Msa0108350 | MtrunA17_Chr4g0054951 | 36.054 | 147 | 78 | 3 | 4 | 138 | 7 | 149 | 8.15e-18 | 83.6 |
Msa0108350 | MtrunA17_Chr5g0400311 | 49.593 | 123 | 62 | 0 | 171 | 293 | 373 | 495 | 4.69e-31 | 122 |
Msa0108350 | MtrunA17_Chr5g0400311 | 31.034 | 174 | 80 | 4 | 4 | 138 | 7 | 179 | 3.29e-17 | 81.6 |
Msa0108350 | MtrunA17_Chr1g0189231 | 22.867 | 293 | 152 | 11 | 24 | 283 | 494 | 745 | 3.29e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0108350 | AT2G01900.3 | 61.695 | 295 | 104 | 2 | 1 | 293 | 1 | 288 | 9.97e-124 | 360 |
Msa0108350 | AT2G01900.2 | 62.718 | 287 | 98 | 2 | 9 | 293 | 1 | 280 | 5.85e-123 | 357 |
Msa0108350 | AT2G01900.1 | 62.718 | 287 | 98 | 2 | 9 | 293 | 1 | 280 | 6.96e-123 | 358 |
Msa0108350 | AT2G37440.1 | 44.805 | 308 | 138 | 6 | 6 | 283 | 7 | 312 | 3.28e-74 | 235 |
Msa0108350 | AT2G37440.3 | 44.805 | 308 | 138 | 6 | 6 | 283 | 7 | 312 | 3.28e-74 | 235 |
Msa0108350 | AT2G37440.2 | 49.587 | 242 | 87 | 6 | 66 | 283 | 1 | 231 | 5.70e-64 | 206 |
Msa0108350 | AT5G65090.2 | 57.937 | 126 | 50 | 1 | 171 | 293 | 205 | 330 | 1.71e-41 | 149 |
Msa0108350 | AT5G65090.2 | 48.052 | 77 | 39 | 1 | 59 | 135 | 5 | 80 | 3.09e-16 | 79.0 |
Msa0108350 | AT5G65090.3 | 57.937 | 126 | 50 | 1 | 171 | 293 | 268 | 393 | 3.74e-41 | 149 |
Msa0108350 | AT5G65090.3 | 44.318 | 88 | 48 | 1 | 48 | 135 | 57 | 143 | 3.71e-16 | 79.0 |
Msa0108350 | AT5G65090.1 | 57.937 | 126 | 50 | 1 | 171 | 293 | 268 | 393 | 3.74e-41 | 149 |
Msa0108350 | AT5G65090.1 | 44.318 | 88 | 48 | 1 | 48 | 135 | 57 | 143 | 3.71e-16 | 79.0 |
Msa0108350 | AT2G32010.2 | 55.556 | 126 | 53 | 1 | 171 | 293 | 332 | 457 | 2.06e-40 | 148 |
Msa0108350 | AT2G32010.2 | 54.667 | 75 | 33 | 1 | 60 | 134 | 87 | 160 | 5.56e-20 | 90.1 |
Msa0108350 | AT2G32010.1 | 55.556 | 126 | 53 | 1 | 171 | 293 | 332 | 457 | 2.06e-40 | 148 |
Msa0108350 | AT2G32010.1 | 54.667 | 75 | 33 | 1 | 60 | 134 | 87 | 160 | 5.56e-20 | 90.1 |
Msa0108350 | AT2G32010.4 | 55.556 | 126 | 53 | 1 | 171 | 293 | 332 | 457 | 2.06e-40 | 148 |
Msa0108350 | AT2G32010.4 | 54.667 | 75 | 33 | 1 | 60 | 134 | 87 | 160 | 5.56e-20 | 90.1 |
Msa0108350 | AT2G32010.3 | 55.556 | 126 | 53 | 1 | 171 | 293 | 332 | 457 | 2.06e-40 | 148 |
Msa0108350 | AT2G32010.3 | 54.667 | 75 | 33 | 1 | 60 | 134 | 87 | 160 | 5.56e-20 | 90.1 |
Msa0108350 | AT1G05470.2 | 54.762 | 126 | 54 | 1 | 171 | 293 | 355 | 480 | 2.77e-40 | 148 |
Msa0108350 | AT1G05470.2 | 54.545 | 77 | 34 | 1 | 60 | 136 | 88 | 163 | 4.21e-20 | 90.5 |
Msa0108350 | AT1G05470.1 | 54.762 | 126 | 54 | 1 | 171 | 293 | 355 | 480 | 2.77e-40 | 148 |
Msa0108350 | AT1G05470.1 | 54.545 | 77 | 34 | 1 | 60 | 136 | 88 | 163 | 4.21e-20 | 90.5 |
Msa0108350 | AT3G63240.2 | 55.556 | 126 | 53 | 1 | 171 | 293 | 284 | 409 | 1.39e-38 | 142 |
Msa0108350 | AT3G63240.2 | 58.571 | 70 | 28 | 1 | 65 | 134 | 89 | 157 | 4.32e-18 | 84.7 |
Msa0108350 | AT3G63240.1 | 55.556 | 126 | 53 | 1 | 171 | 293 | 284 | 409 | 1.39e-38 | 142 |
Msa0108350 | AT3G63240.1 | 58.571 | 70 | 28 | 1 | 65 | 134 | 89 | 157 | 4.32e-18 | 84.7 |
Msa0108350 | AT1G34120.5 | 52.800 | 125 | 57 | 2 | 171 | 293 | 188 | 312 | 2.88e-36 | 134 |
Msa0108350 | AT1G34120.4 | 52.800 | 125 | 57 | 2 | 171 | 293 | 339 | 463 | 6.44e-36 | 134 |
Msa0108350 | AT1G34120.4 | 47.368 | 76 | 39 | 1 | 60 | 135 | 97 | 171 | 4.62e-16 | 78.6 |
Msa0108350 | AT5G04980.4 | 51.587 | 126 | 58 | 1 | 171 | 293 | 163 | 288 | 7.76e-36 | 133 |
Msa0108350 | AT1G34120.1 | 52.800 | 125 | 57 | 2 | 171 | 293 | 339 | 463 | 1.76e-35 | 134 |
Msa0108350 | AT1G34120.1 | 47.368 | 76 | 39 | 1 | 60 | 135 | 97 | 171 | 4.93e-16 | 78.6 |
Msa0108350 | AT5G04980.1 | 51.587 | 126 | 58 | 1 | 171 | 293 | 198 | 323 | 1.92e-35 | 132 |
Msa0108350 | AT5G04980.1 | 54.412 | 68 | 30 | 1 | 62 | 129 | 7 | 73 | 5.67e-16 | 78.2 |
Msa0108350 | AT5G04980.3 | 51.587 | 126 | 58 | 1 | 171 | 293 | 198 | 323 | 1.92e-35 | 132 |
Msa0108350 | AT5G04980.3 | 54.412 | 68 | 30 | 1 | 62 | 129 | 7 | 73 | 5.67e-16 | 78.2 |
Msa0108350 | AT1G34120.2 | 52.800 | 125 | 57 | 2 | 171 | 293 | 343 | 467 | 2.04e-35 | 134 |
Msa0108350 | AT1G34120.2 | 47.368 | 76 | 39 | 1 | 60 | 135 | 101 | 175 | 5.64e-16 | 78.6 |
Msa0108350 | AT5G04980.2 | 51.587 | 126 | 58 | 1 | 171 | 293 | 227 | 352 | 2.16e-35 | 133 |
Msa0108350 | AT5G04980.2 | 46.809 | 94 | 42 | 3 | 36 | 129 | 17 | 102 | 2.51e-16 | 79.3 |
Msa0108350 | AT1G34120.3 | 52.800 | 125 | 56 | 3 | 171 | 293 | 343 | 466 | 1.01e-33 | 129 |
Msa0108350 | AT1G34120.3 | 47.368 | 76 | 39 | 1 | 60 | 135 | 101 | 175 | 5.43e-16 | 78.6 |
Msa0108350 | AT1G71710.2 | 49.593 | 123 | 62 | 0 | 171 | 293 | 405 | 527 | 2.81e-33 | 129 |
Msa0108350 | AT1G71710.2 | 42.574 | 101 | 53 | 2 | 35 | 135 | 94 | 189 | 7.02e-18 | 84.0 |
Msa0108350 | AT1G71710.1 | 49.593 | 123 | 62 | 0 | 171 | 293 | 414 | 536 | 2.90e-33 | 129 |
Msa0108350 | AT1G71710.1 | 42.574 | 101 | 53 | 2 | 35 | 135 | 103 | 198 | 6.56e-18 | 84.3 |
Msa0108350 | AT4G18010.2 | 48.780 | 123 | 63 | 0 | 171 | 293 | 395 | 517 | 1.73e-32 | 126 |
Msa0108350 | AT4G18010.2 | 34.091 | 176 | 71 | 4 | 4 | 135 | 7 | 181 | 4.37e-18 | 84.7 |
Msa0108350 | AT4G18010.1 | 48.780 | 123 | 63 | 0 | 171 | 293 | 395 | 517 | 3.46e-32 | 125 |
Msa0108350 | AT4G18010.1 | 34.091 | 176 | 71 | 4 | 4 | 135 | 7 | 181 | 4.37e-18 | 84.7 |
Msa0108350 | AT1G65580.2 | 26.255 | 259 | 129 | 8 | 58 | 283 | 266 | 495 | 5.63e-15 | 75.5 |
Msa0108350 | AT1G65580.1 | 26.255 | 259 | 129 | 8 | 58 | 283 | 532 | 761 | 6.00e-15 | 75.5 |
Msa0108350 | AT1G05630.3 | 22.789 | 294 | 156 | 9 | 24 | 283 | 538 | 794 | 4.93e-12 | 66.6 |
Msa0108350 | AT1G05630.2 | 22.789 | 294 | 156 | 9 | 24 | 283 | 538 | 794 | 4.98e-12 | 67.0 |
Msa0108350 | AT1G05630.1 | 24.291 | 247 | 142 | 8 | 24 | 262 | 538 | 747 | 9.01e-12 | 66.2 |
Find 51 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTTTGATATCTATGTATT+TGG | 0.059903 | 1_3:-19727449 | Msa0108350:CDS |
TGTATCACTATGATCATTAA+TGG | 0.163498 | 1_3:+19727720 | None:intergenic |
AAGTTCTACAGATCCTTTAT+TGG | 0.258601 | 1_3:-19727782 | Msa0108350:CDS |
TCATGATCAAGAATCTTTCT+TGG | 0.273995 | 1_3:+19725965 | None:intergenic |
AGATAATTGATCATCATTAT+TGG | 0.274282 | 1_3:+19727756 | None:intergenic |
ACTATGATCATTAATGGATT+TGG | 0.307634 | 1_3:+19727726 | None:intergenic |
TGTGGCATCATGGGCTTCTT+AGG | 0.310282 | 1_3:-19726765 | Msa0108350:CDS |
GTGTGCAGTCATCTAGCTTC+TGG | 0.323109 | 1_3:-19726079 | Msa0108350:CDS |
ATAGTAAGATTTCAACAAAA+TGG | 0.329956 | 1_3:-19727049 | Msa0108350:CDS |
AATACATTTGATGCATTTAG+TGG | 0.341530 | 1_3:+19727083 | None:intergenic |
CCTTTGATATCTATGTATTT+GGG | 0.345233 | 1_3:-19727448 | Msa0108350:intron |
ACTAAATGCATCAAATGTAT+TGG | 0.366321 | 1_3:-19727081 | Msa0108350:CDS |
AAATTCAAAATAGTGCCTTT+AGG | 0.373732 | 1_3:+19725989 | None:intergenic |
GGTTATGTGGCCTGCATTAG+TGG | 0.381333 | 1_3:-19727860 | Msa0108350:CDS |
AGTAAGCGTGTGGTTTCTTC+CGG | 0.381724 | 1_3:+19725157 | None:intergenic |
TCATTATTGGTAGCCAATAA+AGG | 0.390562 | 1_3:+19727769 | None:intergenic |
CTAAATGCATCAAATGTATT+GGG | 0.392848 | 1_3:-19727080 | Msa0108350:CDS |
TCATATTTGTTTAGGTTATG+TGG | 0.397995 | 1_3:-19727873 | Msa0108350:intron |
AAATTACAGAATATCTCTTC+CGG | 0.427972 | 1_3:-19725176 | Msa0108350:CDS |
TCAATATTCAACCCTTCATC+TGG | 0.430166 | 1_3:+19727497 | None:intergenic |
ATGTGTTGGATGTGGCATCA+TGG | 0.454248 | 1_3:-19726775 | Msa0108350:CDS |
GCTGATTTACACTGCTGAGC+TGG | 0.467900 | 1_3:+19726903 | None:intergenic |
TTGTATCATTAGCAAGCAAA+TGG | 0.470095 | 1_3:-19726865 | Msa0108350:intron |
TGCAGTCATGTAATATTGCT+TGG | 0.474593 | 1_3:-19725205 | Msa0108350:intron |
TTAGAAATGCTTTGAACAAG+AGG | 0.475137 | 1_3:-19727016 | Msa0108350:CDS |
CTAGCTTCTGGAGGAAAAGA+AGG | 0.476817 | 1_3:-19726067 | Msa0108350:CDS |
TGGCTAACAAGATACTAAAC+AGG | 0.478415 | 1_3:-19727840 | Msa0108350:CDS |
TTTGTTAGTACATGGAACAT+AGG | 0.487262 | 1_3:-19727530 | Msa0108350:CDS |
AATAAAGGATCTGTAGAACT+TGG | 0.492368 | 1_3:+19727784 | None:intergenic |
ATTGTTGCAAAGATATTGAA+AGG | 0.497320 | 1_3:-19726983 | Msa0108350:CDS |
TGTGTTGGATGTGGCATCAT+GGG | 0.501040 | 1_3:-19726774 | Msa0108350:CDS |
ATCTTGTTAGCCACTAATGC+AGG | 0.504357 | 1_3:+19727850 | None:intergenic |
AAGATACTAAACAGGAAACT+TGG | 0.508569 | 1_3:-19727832 | Msa0108350:CDS |
AGATGAAGGGTTGAATATTG+AGG | 0.512538 | 1_3:-19727495 | Msa0108350:CDS |
GGTGGAATTGCACCAGATGA+AGG | 0.513447 | 1_3:-19727509 | Msa0108350:CDS |
AAGAAGGAGATGAGAAGCAT+AGG | 0.520647 | 1_3:-19726051 | Msa0108350:CDS |
GATGTCTAATGAAAGGACTA+AGG | 0.530564 | 1_3:+19726808 | None:intergenic |
ATCATTAGCAAGCAAATGGT+TGG | 0.540433 | 1_3:-19726861 | Msa0108350:intron |
CATCCATGTGTCTCATGTGT+TGG | 0.554145 | 1_3:-19726789 | Msa0108350:CDS |
TGGTATATTGATATCTGTGT+GGG | 0.555762 | 1_3:-19726841 | Msa0108350:CDS |
TGTGTCTCATGTGTTGGATG+TGG | 0.571735 | 1_3:-19726783 | Msa0108350:CDS |
CATGGGCTTCTTAGGCAACA+AGG | 0.587041 | 1_3:-19726757 | Msa0108350:intron |
CCCAAATACATAGATATCAA+AGG | 0.590421 | 1_3:+19727448 | None:intergenic |
TTGTTGCAAAGATATTGAAA+GGG | 0.593223 | 1_3:-19726982 | Msa0108350:CDS |
GTTAGTACATGGAACATAGG+TGG | 0.598161 | 1_3:-19727527 | Msa0108350:CDS |
TTGGTATATTGATATCTGTG+TGG | 0.601371 | 1_3:-19726842 | Msa0108350:CDS |
ACACATGGATGTCTAATGAA+AGG | 0.608846 | 1_3:+19726801 | None:intergenic |
GTGGAATTGCACCAGATGAA+GGG | 0.609719 | 1_3:-19727508 | Msa0108350:CDS |
CATCCAACACATGAGACACA+TGG | 0.611478 | 1_3:+19726786 | None:intergenic |
GATTTGAAGAATATTTGTCA+AGG | 0.612327 | 1_3:-19726933 | Msa0108350:CDS |
TGCAGTCATCTAGCTTCTGG+AGG | 0.612853 | 1_3:-19726076 | Msa0108350:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTATCAACAAAT+TGG | + | chr1_3:19725233-19725252 | None:intergenic | 10.0% |
!! | TATATTTATCATATTTGTTT+AGG | - | chr1_3:19725276-19725295 | Msa0108350:intron | 10.0% |
!! | AAAAATTAAATTTCTTACCA+AGG | - | chr1_3:19725248-19725267 | Msa0108350:intron | 15.0% |
!! | AAAATTAAATTTCTTACCAA+GGG | - | chr1_3:19725249-19725268 | Msa0108350:intron | 15.0% |
!! | GAAATAGAAACATTAAAAAA+TGG | - | chr1_3:19725767-19725786 | Msa0108350:intron | 15.0% |
!!! | AATTAATCTTTTTACAATCT+AGG | - | chr1_3:19726036-19726055 | Msa0108350:CDS | 15.0% |
!! | ATACATTTGATTAATCTAAT+TGG | + | chr1_3:19726551-19726570 | None:intergenic | 15.0% |
!! | ATGTCAAAATTGTTATATTT+AGG | - | chr1_3:19726646-19726665 | Msa0108350:intron | 15.0% |
!! | TTCAATTTAAGCATTATTAT+TGG | - | chr1_3:19727416-19727435 | Msa0108350:intron | 15.0% |
!!! | ATGATAGTATAGTTTAATTT+TGG | + | chr1_3:19727483-19727502 | None:intergenic | 15.0% |
!! | AGATAATTGATCATCATTAT+TGG | + | chr1_3:19725404-19725423 | None:intergenic | 20.0% |
!! | ATAAAATTATTGCATGATGA+TGG | + | chr1_3:19725487-19725506 | None:intergenic | 20.0% |
!! | GAAAAAATTATCACTATGTT+TGG | - | chr1_3:19725869-19725888 | Msa0108350:intron | 20.0% |
!!! | TTTTTTTCGTCTCAAAATTT+TGG | - | chr1_3:19725926-19725945 | Msa0108350:intron | 20.0% |
!! | ATCTAAACCACATATATATA+TGG | + | chr1_3:19726001-19726020 | None:intergenic | 20.0% |
!! | ATAGTAAGATTTCAACAAAA+TGG | - | chr1_3:19726108-19726127 | Msa0108350:CDS | 20.0% |
!! | AGTAAGATGAATTAAAAGTA+GGG | + | chr1_3:19726443-19726462 | None:intergenic | 20.0% |
!! | AAGTAAGATGAATTAAAAGT+AGG | + | chr1_3:19726444-19726463 | None:intergenic | 20.0% |
!!! | ATATCAATTTGTTTGATTCA+AGG | + | chr1_3:19726742-19726761 | None:intergenic | 20.0% |
!! | CAAACAAATTGATATTTGAT+TGG | - | chr1_3:19726747-19726766 | Msa0108350:intron | 20.0% |
!!! | TTAGCTTCCTTTTAATAATT+AGG | - | chr1_3:19727292-19727311 | Msa0108350:intron | 20.0% |
!! | AAAGGAACCTAATTATTAAA+AGG | + | chr1_3:19727302-19727321 | None:intergenic | 20.0% |
!!! | ATAGTATAGTTTAATTTTGG+CGG | + | chr1_3:19727480-19727499 | None:intergenic | 20.0% |
!! | TAAATCAATGTATCTCTTTA+AGG | + | chr1_3:19727664-19727683 | None:intergenic | 20.0% |
!! | TGTTATTCAGTAATTAAAAG+AGG | + | chr1_3:19727722-19727741 | None:intergenic | 20.0% |
!! | AAGTTAATTTAAGCATAAGT+CGG | + | chr1_3:19727764-19727783 | None:intergenic | 20.0% |
!! | ATGTATGTCAAAGTAAATTT+AGG | + | chr1_3:19727868-19727887 | None:intergenic | 20.0% |
! | AGAAAATATGAGAAGAAAAG+TGG | + | chr1_3:19725187-19725206 | None:intergenic | 25.0% |
! | ATGATAAATATACAAACCCT+TGG | + | chr1_3:19725268-19725287 | None:intergenic | 25.0% |
!! | TCATATTTGTTTAGGTTATG+TGG | - | chr1_3:19725284-19725303 | Msa0108350:intron | 25.0% |
!!! | ACTATGATCATTAATGGATT+TGG | + | chr1_3:19725434-19725453 | None:intergenic | 25.0% |
! | TGTATCACTATGATCATTAA+TGG | + | chr1_3:19725440-19725459 | None:intergenic | 25.0% |
! | TCCTTTGATATCTATGTATT+TGG | - | chr1_3:19725708-19725727 | Msa0108350:intron | 25.0% |
! | CCTTTGATATCTATGTATTT+GGG | - | chr1_3:19725709-19725728 | Msa0108350:intron | 25.0% |
! | AATACATTTGATGCATTTAG+TGG | + | chr1_3:19726077-19726096 | None:intergenic | 25.0% |
! | ACTAAATGCATCAAATGTAT+TGG | - | chr1_3:19726076-19726095 | Msa0108350:CDS | 25.0% |
! | CTAAATGCATCAAATGTATT+GGG | - | chr1_3:19726077-19726096 | Msa0108350:CDS | 25.0% |
! | ATTGTTGCAAAGATATTGAA+AGG | - | chr1_3:19726174-19726193 | Msa0108350:intron | 25.0% |
! | TTGTTGCAAAGATATTGAAA+GGG | - | chr1_3:19726175-19726194 | Msa0108350:intron | 25.0% |
! | GATTTGAAGAATATTTGTCA+AGG | - | chr1_3:19726224-19726243 | Msa0108350:intron | 25.0% |
! | TGATACAATGAAAATCTTGT+GGG | + | chr1_3:19726280-19726299 | None:intergenic | 25.0% |
! | ATGATACAATGAAAATCTTG+TGG | + | chr1_3:19726281-19726300 | None:intergenic | 25.0% |
!! | TAGGATCCTTTTTAATGTTT+TGG | - | chr1_3:19726792-19726811 | Msa0108350:CDS | 25.0% |
! | AGCATACCAAAACATTAAAA+AGG | + | chr1_3:19726801-19726820 | None:intergenic | 25.0% |
!! | ATGTTGCTGAAATATTTTCT+AGG | - | chr1_3:19727136-19727155 | Msa0108350:intron | 25.0% |
! | AAATTCAAAATAGTGCCTTT+AGG | + | chr1_3:19727171-19727190 | None:intergenic | 25.0% |
! | AAGCTAAAACCAAATTATTG+AGG | + | chr1_3:19727279-19727298 | None:intergenic | 25.0% |
! | AAATTGTTGTACTACTATAG+TGG | - | chr1_3:19727535-19727554 | Msa0108350:CDS | 25.0% |
! | AATTGTTGTACTACTATAGT+GGG | - | chr1_3:19727536-19727555 | Msa0108350:CDS | 25.0% |
!!! | TTAGCTTGTTTTACTCTATT+TGG | + | chr1_3:19727605-19727624 | None:intergenic | 25.0% |
! | AGTAATTAAAAGAGGTCAAA+TGG | + | chr1_3:19727714-19727733 | None:intergenic | 25.0% |
!!! | GATTTTTTTGACATACATGT+TGG | - | chr1_3:19727803-19727822 | Msa0108350:CDS | 25.0% |
!!! | GATTTTTTTGACATACATGT+TGG | - | chr1_3:19727803-19727822 | Msa0108350:CDS | 25.0% |
!! | CAATTTTTCTACATACATGT+TGG | - | chr1_3:19727892-19727911 | Msa0108350:intron | 25.0% |
! | AAATTACAGAATATCTCTTC+CGG | - | chr1_3:19727981-19728000 | Msa0108350:intron | 25.0% |
AAGATACTAAACAGGAAACT+TGG | - | chr1_3:19725325-19725344 | Msa0108350:intron | 30.0% | |
AATAAAGGATCTGTAGAACT+TGG | + | chr1_3:19725376-19725395 | None:intergenic | 30.0% | |
AAGTTCTACAGATCCTTTAT+TGG | - | chr1_3:19725375-19725394 | Msa0108350:intron | 30.0% | |
! | TCATTATTGGTAGCCAATAA+AGG | + | chr1_3:19725391-19725410 | None:intergenic | 30.0% |
TTTGTTAGTACATGGAACAT+AGG | - | chr1_3:19725627-19725646 | Msa0108350:intron | 30.0% | |
CCCAAATACATAGATATCAA+AGG | + | chr1_3:19725712-19725731 | None:intergenic | 30.0% | |
TGCATGTCCATATATATATG+TGG | - | chr1_3:19725991-19726010 | Msa0108350:CDS | 30.0% | |
! | TTAGAAATGCTTTGAACAAG+AGG | - | chr1_3:19726141-19726160 | Msa0108350:intron | 30.0% |
GATACAATGAAAATCTTGTG+GGG | + | chr1_3:19726279-19726298 | None:intergenic | 30.0% | |
TTGTATCATTAGCAAGCAAA+TGG | - | chr1_3:19726292-19726311 | Msa0108350:intron | 30.0% | |
TTGGTATATTGATATCTGTG+TGG | - | chr1_3:19726315-19726334 | Msa0108350:intron | 30.0% | |
TGGTATATTGATATCTGTGT+GGG | - | chr1_3:19726316-19726335 | Msa0108350:intron | 30.0% | |
! | AAAGTAGGGTTTGGTTAATT+AGG | + | chr1_3:19726429-19726448 | None:intergenic | 30.0% |
GATGAATTAAAAGTAGGGTT+TGG | + | chr1_3:19726438-19726457 | None:intergenic | 30.0% | |
ATCTAATTGGACACTAATCA+AGG | + | chr1_3:19726538-19726557 | None:intergenic | 30.0% | |
TTAACCTTAATCCTTTGAGT+TGG | - | chr1_3:19726677-19726696 | Msa0108350:intron | 30.0% | |
!! | TATGCTCGAATTGTTATTTC+TGG | - | chr1_3:19726815-19726834 | Msa0108350:CDS | 30.0% |
!! | ATGCTCGAATTGTTATTTCT+GGG | - | chr1_3:19726816-19726835 | Msa0108350:CDS | 30.0% |
!!! | CTGGGAATATTTTTTTAACC+TGG | - | chr1_3:19726834-19726853 | Msa0108350:CDS | 30.0% |
TTCAACAGTTGAAATTCAGT+TGG | + | chr1_3:19726876-19726895 | None:intergenic | 30.0% | |
CCAACTAAATTTCAACATGT+TGG | + | chr1_3:19726922-19726941 | None:intergenic | 30.0% | |
CCAACATGTTGAAATTTAGT+TGG | - | chr1_3:19726919-19726938 | Msa0108350:CDS | 30.0% | |
TTACTATTCTGACAAATTGC+AGG | - | chr1_3:19727008-19727027 | Msa0108350:CDS | 30.0% | |
TACTATTCTGACAAATTGCA+GGG | - | chr1_3:19727009-19727028 | Msa0108350:CDS | 30.0% | |
TCATGATCAAGAATCTTTCT+TGG | + | chr1_3:19727195-19727214 | None:intergenic | 30.0% | |
! | AATTATTGAGGTTGATTGGT+TGG | + | chr1_3:19727267-19727286 | None:intergenic | 30.0% |
ACCAATCAACCTCAATAATT+TGG | - | chr1_3:19727267-19727286 | Msa0108350:intron | 30.0% | |
! | ACCAAATTATTGAGGTTGAT+TGG | + | chr1_3:19727271-19727290 | None:intergenic | 30.0% |
!!! | CTTTGTTTTCATGATTTGGT+GGG | + | chr1_3:19727325-19727344 | None:intergenic | 30.0% |
!!! | ACTTTGTTTTCATGATTTGG+TGG | + | chr1_3:19727326-19727345 | None:intergenic | 30.0% |
!!! | AGCACTTTGTTTTCATGATT+TGG | + | chr1_3:19727329-19727348 | None:intergenic | 30.0% |
! | CTTTAGTTTAGCATACATGT+TGG | - | chr1_3:19727781-19727800 | Msa0108350:CDS | 30.0% |
TTGACATACATGTTGGATTA+TGG | - | chr1_3:19727810-19727829 | Msa0108350:CDS | 30.0% | |
TGGCTAACAAGATACTAAAC+AGG | - | chr1_3:19725317-19725336 | Msa0108350:intron | 35.0% | |
CATATGCAGAAAAGTTGTAG+TGG | - | chr1_3:19725540-19725559 | Msa0108350:intron | 35.0% | |
!! | GAAAAGTTGTAGTGGTTTTG+TGG | - | chr1_3:19725548-19725567 | Msa0108350:intron | 35.0% |
! | GAAGGGTTTTTGTTAGTACA+TGG | - | chr1_3:19725619-19725638 | Msa0108350:intron | 35.0% |
TCAATATTCAACCCTTCATC+TGG | + | chr1_3:19725663-19725682 | None:intergenic | 35.0% | |
AGATGAAGGGTTGAATATTG+AGG | - | chr1_3:19725662-19725681 | Msa0108350:intron | 35.0% | |
TAATTTCAGCACTCACTTCA+TGG | - | chr1_3:19725732-19725751 | Msa0108350:intron | 35.0% | |
ATCATTAGCAAGCAAATGGT+TGG | - | chr1_3:19726296-19726315 | Msa0108350:intron | 35.0% | |
GATGTCTAATGAAAGGACTA+AGG | + | chr1_3:19726352-19726371 | None:intergenic | 35.0% | |
ACACATGGATGTCTAATGAA+AGG | + | chr1_3:19726359-19726378 | None:intergenic | 35.0% | |
ATTGACAGTGATGAGATTAG+TGG | + | chr1_3:19726507-19726526 | None:intergenic | 35.0% | |
TTAGATTATTCCAACGACTG+AGG | - | chr1_3:19726595-19726614 | Msa0108350:intron | 35.0% | |
CAGTTGAAATTCAGTTGGAT+AGG | + | chr1_3:19726871-19726890 | None:intergenic | 35.0% | |
!! | TCTAGGACAACTTTTCCTAA+AGG | - | chr1_3:19727153-19727172 | Msa0108350:intron | 35.0% |
!!! | TTTTCATGATTTGGTGGGAA+AGG | + | chr1_3:19727320-19727339 | None:intergenic | 35.0% |
AATTTGTCCTGCTAGATTGA+AGG | - | chr1_3:19727454-19727473 | Msa0108350:CDS | 35.0% | |
TGCAGTCATGTAATATTGCT+TGG | - | chr1_3:19727952-19727971 | Msa0108350:intron | 35.0% | |
ATCTTGTTAGCCACTAATGC+AGG | + | chr1_3:19725310-19725329 | None:intergenic | 40.0% | |
GTTAGTACATGGAACATAGG+TGG | - | chr1_3:19725630-19725649 | Msa0108350:intron | 40.0% | |
!! | CACTTCATGGTTTTCTAGCA+TGG | - | chr1_3:19725745-19725764 | Msa0108350:intron | 40.0% |
TCACTATGTTTGGCAACTCT+AGG | - | chr1_3:19725879-19725898 | Msa0108350:intron | 40.0% | |
! | TATGTTTGGCAACTCTAGGA+CGG | - | chr1_3:19725883-19725902 | Msa0108350:intron | 40.0% |
CCTTCCAACTCAAAGGATTA+AGG | + | chr1_3:19726684-19726703 | None:intergenic | 40.0% | |
!! | CCTTAATCCTTTGAGTTGGA+AGG | - | chr1_3:19726681-19726700 | Msa0108350:intron | 40.0% |
TATTGTGCAATCGAGCACAT+AGG | - | chr1_3:19726773-19726792 | Msa0108350:CDS | 40.0% | |
TTCAGTTGGATAGGTTTCAG+AGG | + | chr1_3:19726862-19726881 | None:intergenic | 40.0% | |
! | AAGAAGGAGATGAGAAGCAT+AGG | - | chr1_3:19727106-19727125 | Msa0108350:intron | 40.0% |
! | ATTGAGGTTGATTGGTTGGA+CGG | + | chr1_3:19727263-19727282 | None:intergenic | 40.0% |
TAGCAGGACAAATTCAAAGC+TGG | + | chr1_3:19727448-19727467 | None:intergenic | 40.0% | |
GTGGAATTGCACCAGATGAA+GGG | - | chr1_3:19725649-19725668 | Msa0108350:intron | 45.0% | |
!! | CTCTAGGACGGAATTAGAGA+TGG | - | chr1_3:19725895-19725914 | Msa0108350:intron | 45.0% |
CATCCATGTGTCTCATGTGT+TGG | - | chr1_3:19726368-19726387 | Msa0108350:intron | 45.0% | |
CATCCAACACATGAGACACA+TGG | + | chr1_3:19726374-19726393 | None:intergenic | 45.0% | |
TGTGTCTCATGTGTTGGATG+TGG | - | chr1_3:19726374-19726393 | Msa0108350:intron | 45.0% | |
ATGTGTTGGATGTGGCATCA+TGG | - | chr1_3:19726382-19726401 | Msa0108350:intron | 45.0% | |
TGTGTTGGATGTGGCATCAT+GGG | - | chr1_3:19726383-19726402 | Msa0108350:intron | 45.0% | |
AAGGTCCAACCGAATCTCAA+CGG | - | chr1_3:19726700-19726719 | Msa0108350:intron | 45.0% | |
TCGATCCTACCGTTGAGATT+CGG | + | chr1_3:19726712-19726731 | None:intergenic | 45.0% | |
CAACATGTTGGATTCGAGCT+AGG | + | chr1_3:19726910-19726929 | None:intergenic | 45.0% | |
! | CTAGCTTCTGGAGGAAAAGA+AGG | - | chr1_3:19727090-19727109 | Msa0108350:CDS | 45.0% |
AGTAAGCGTGTGGTTTCTTC+CGG | + | chr1_3:19728003-19728022 | None:intergenic | 45.0% | |
!!! | TTTATTTTTTTATTTATTGA+AGG | - | chr1_3:19725601-19725620 | Msa0108350:intron | 5.0% |
!!! | TTATTTTTTTATTTATTGAA+GGG | - | chr1_3:19725602-19725621 | Msa0108350:intron | 5.0% |
GGTTATGTGGCCTGCATTAG+TGG | - | chr1_3:19725297-19725316 | Msa0108350:intron | 50.0% | |
GGTGGAATTGCACCAGATGA+AGG | - | chr1_3:19725648-19725667 | Msa0108350:intron | 50.0% | |
! | GCTGATTTACACTGCTGAGC+TGG | + | chr1_3:19726257-19726276 | None:intergenic | 50.0% |
TGTGGCATCATGGGCTTCTT+AGG | - | chr1_3:19726392-19726411 | Msa0108350:intron | 50.0% | |
CATGGGCTTCTTAGGCAACA+AGG | - | chr1_3:19726400-19726419 | Msa0108350:intron | 50.0% | |
TCCAACGACTGAGGTGAAGT+AGG | - | chr1_3:19726604-19726623 | Msa0108350:intron | 50.0% | |
TCCTACTTCACCTCAGTCGT+TGG | + | chr1_3:19726608-19726627 | None:intergenic | 50.0% | |
GGTTGGACCTTCCAACTCAA+AGG | + | chr1_3:19726691-19726710 | None:intergenic | 50.0% | |
TCCAACCGAATCTCAACGGT+AGG | - | chr1_3:19726704-19726723 | Msa0108350:intron | 50.0% | |
! | TCCTACCGTTGAGATTCGGT+TGG | + | chr1_3:19726708-19726727 | None:intergenic | 50.0% |
GGATAGGTTTCAGAGGATCC+AGG | + | chr1_3:19726855-19726874 | None:intergenic | 50.0% | |
TAGTTGGATCGACTGCACAG+AGG | - | chr1_3:19726935-19726954 | Msa0108350:CDS | 50.0% | |
! | GTGTGCAGTCATCTAGCTTC+TGG | - | chr1_3:19727078-19727097 | Msa0108350:CDS | 50.0% |
! | TGCAGTCATCTAGCTTCTGG+AGG | - | chr1_3:19727081-19727100 | Msa0108350:CDS | 50.0% |
TTGGATCGACTGCACAGAGG+AGG | - | chr1_3:19726938-19726957 | Msa0108350:CDS | 55.0% | |
TGGATCGACTGCACAGAGGA+GGG | - | chr1_3:19726939-19726958 | Msa0108350:CDS | 55.0% | |
TTGGCGGCCTTCAATCTAGC+AGG | + | chr1_3:19727464-19727483 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 19725156 | 19728023 | 19725156 | ID=Msa0108350;Name=Msa0108350 |
chr1_3 | mRNA | 19725156 | 19728023 | 19725156 | ID=Msa0108350-mRNA-1;Parent=Msa0108350;Name=Msa0108350-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0.83|0.57|7|0|293 |
chr1_3 | exon | 19728003 | 19728023 | 19728003 | ID=Msa0108350-mRNA-1:exon:7121;Parent=Msa0108350-mRNA-1 |
chr1_3 | exon | 19727709 | 19727881 | 19727709 | ID=Msa0108350-mRNA-1:exon:7120;Parent=Msa0108350-mRNA-1 |
chr1_3 | exon | 19727449 | 19727556 | 19727449 | ID=Msa0108350-mRNA-1:exon:7119;Parent=Msa0108350-mRNA-1 |
chr1_3 | exon | 19726915 | 19727121 | 19726915 | ID=Msa0108350-mRNA-1:exon:7118;Parent=Msa0108350-mRNA-1 |
chr1_3 | exon | 19726758 | 19726875 | 19726758 | ID=Msa0108350-mRNA-1:exon:7117;Parent=Msa0108350-mRNA-1 |
chr1_3 | exon | 19725965 | 19726149 | 19725965 | ID=Msa0108350-mRNA-1:exon:7116;Parent=Msa0108350-mRNA-1 |
chr1_3 | exon | 19725156 | 19725222 | 19725156 | ID=Msa0108350-mRNA-1:exon:7115;Parent=Msa0108350-mRNA-1 |
chr1_3 | CDS | 19728003 | 19728023 | 19728003 | ID=Msa0108350-mRNA-1:cds;Parent=Msa0108350-mRNA-1 |
chr1_3 | CDS | 19727709 | 19727881 | 19727709 | ID=Msa0108350-mRNA-1:cds;Parent=Msa0108350-mRNA-1 |
chr1_3 | CDS | 19727449 | 19727556 | 19727449 | ID=Msa0108350-mRNA-1:cds;Parent=Msa0108350-mRNA-1 |
chr1_3 | CDS | 19726915 | 19727121 | 19726915 | ID=Msa0108350-mRNA-1:cds;Parent=Msa0108350-mRNA-1 |
chr1_3 | CDS | 19726758 | 19726875 | 19726758 | ID=Msa0108350-mRNA-1:cds;Parent=Msa0108350-mRNA-1 |
chr1_3 | CDS | 19725965 | 19726149 | 19725965 | ID=Msa0108350-mRNA-1:cds;Parent=Msa0108350-mRNA-1 |
chr1_3 | CDS | 19725156 | 19725222 | 19725156 | ID=Msa0108350-mRNA-1:cds;Parent=Msa0108350-mRNA-1 |
Gene Sequence |
Protein sequence |