Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836610 | AES94704.2 | 97.128 | 592 | 17 | 0 | 1 | 592 | 1 | 592 | 0.0 | 1163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836610 | sp|Q8N2M8|CLASR_HUMAN | 38.849 | 139 | 85 | 0 | 1 | 139 | 1 | 139 | 8.77e-22 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836610 | G7K6P7 | 97.128 | 592 | 17 | 0 | 1 | 592 | 1 | 592 | 0.0 | 1163 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0091460 | Msa0836610 | 0.800696 | 1.276835e-48 | -8.615850e-47 |
| Msa0115540 | Msa0836610 | 0.817043 | 4.046790e-52 | -8.615850e-47 |
| Msa0711450 | Msa0836610 | 0.820535 | 6.516504e-53 | -8.615850e-47 |
| Msa0715020 | Msa0836610 | 0.935033 | 1.599277e-96 | -8.615850e-47 |
| Msa0756990 | Msa0836610 | 0.930098 | 2.685008e-93 | -8.615850e-47 |
| Msa0779690 | Msa0836610 | 0.806201 | 9.228043e-50 | -8.615850e-47 |
| Msa0790600 | Msa0836610 | 0.803722 | 3.043176e-49 | -8.615850e-47 |
| Msa0797990 | Msa0836610 | 0.879795 | 9.307548e-70 | -8.615850e-47 |
| Msa0188900 | Msa0836610 | 0.823733 | 1.181734e-53 | -8.615850e-47 |
| Msa0231370 | Msa0836610 | 0.812239 | 4.685887e-51 | -8.615850e-47 |
| Msa0270650 | Msa0836610 | 0.801685 | 8.014285e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836610 | MtrunA17_Chr5g0402261 | 97.996 | 549 | 11 | 0 | 1 | 549 | 1 | 549 | 0.0 | 1076 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836610 | AT4G36980.2 | 70.625 | 480 | 129 | 6 | 1 | 474 | 1 | 474 | 0.0 | 544 |
| Msa0836610 | AT4G36980.4 | 70.625 | 480 | 129 | 6 | 1 | 474 | 1 | 474 | 0.0 | 544 |
| Msa0836610 | AT4G36980.1 | 70.625 | 480 | 129 | 6 | 1 | 474 | 1 | 474 | 0.0 | 544 |
| Msa0836610 | AT4G36980.3 | 70.625 | 480 | 128 | 7 | 1 | 474 | 1 | 473 | 0.0 | 538 |
Find 156 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGAATACATAACTGAATT+TGG | 0.161027 | 5_4:-10088147 | Msa0836610:CDS |
| ATTCAGAAAGTTGACATTTC+AGG | 0.223226 | 5_4:-10086121 | Msa0836610:intron |
| GAGATAATTGCAAAAGAATA+TGG | 0.223621 | 5_4:-10088861 | Msa0836610:CDS |
| AAGTTAAAGGCAAGTGGTTC+TGG | 0.286261 | 5_4:-10086883 | Msa0836610:CDS |
| CAAGTTCTCGCTCCCGTTCT+CGG | 0.286578 | 5_4:-10086297 | Msa0836610:CDS |
| GACCGAGAACGGGTGCGATT+AGG | 0.288278 | 5_4:+10086271 | None:intergenic |
| CTCAGCACTAGCAAAGTTAA+AGG | 0.294524 | 5_4:-10086896 | Msa0836610:CDS |
| ACCGAGAACGGGTGCGATTA+GGG | 0.296244 | 5_4:+10086272 | None:intergenic |
| TAGAATACATAACTGAATTT+GGG | 0.302082 | 5_4:-10088146 | Msa0836610:CDS |
| AACTATCGAAATCAAAATTA+GGG | 0.306989 | 5_4:-10092085 | Msa0836610:intron |
| CCCCTAATCGCACCCGTTCT+CGG | 0.323479 | 5_4:-10086273 | Msa0836610:CDS |
| CTGGAACCCCTGCTTCTACT+TGG | 0.333387 | 5_4:+10086331 | None:intergenic |
| ACATTTCCACTTACAATTGC+AGG | 0.337629 | 5_4:+10088753 | None:intergenic |
| AATATCTTGTTTCCCATTCC+AGG | 0.340245 | 5_4:+10090566 | None:intergenic |
| CTATACCTTTGCAGATTTGA+TGG | 0.357306 | 5_4:-10090444 | Msa0836610:intron |
| CACCTGGGAGAACGAGAATA+AGG | 0.360202 | 5_4:+10086211 | None:intergenic |
| CACCCCAAGAGAGACTTAAA+AGG | 0.365422 | 5_4:-10086822 | Msa0836610:CDS |
| TTGCATGTCGATCCTGCTTC+TGG | 0.366742 | 5_4:-10087746 | Msa0836610:CDS |
| GTGCTCTCCTAGATTTCATT+CGG | 0.367039 | 5_4:-10090419 | Msa0836610:CDS |
| CAAAATCAATCTCAATTGTC+AGG | 0.371934 | 5_4:-10092153 | Msa0836610:five_prime_UTR |
| TGATGTAGCACACGAGTTCC+AGG | 0.390478 | 5_4:+10088565 | None:intergenic |
| ATTGCTCCCAAGTGGTTAGA+AGG | 0.397816 | 5_4:-10086020 | Msa0836610:CDS |
| AGAACTTGAGTGATATCTTC+TGG | 0.399716 | 5_4:+10086312 | None:intergenic |
| AAGCTTATTCTCGTTCTAGA+AGG | 0.405006 | 5_4:-10088374 | Msa0836610:intron |
| TAGGAGTCTTTGGTTTGCTT+CGG | 0.406206 | 5_4:+10088172 | None:intergenic |
| GCGATTAGGGGACCGAGAAC+GGG | 0.414338 | 5_4:+10086285 | None:intergenic |
| CTGTATTGCAGGTCATCATC+TGG | 0.420609 | 5_4:-10087785 | Msa0836610:intron |
| GGGAAATTCATTCATTCATC+GGG | 0.421739 | 5_4:-10092132 | Msa0836610:five_prime_UTR |
| GTATGGTTGGCTTGTTTACA+TGG | 0.422177 | 5_4:-10088829 | Msa0836610:CDS |
| TCCTCAGGATACCCTGGAAT+GGG | 0.422424 | 5_4:-10090578 | Msa0836610:intron |
| TAACAATCCTTGTTGATCTT+CGG | 0.423578 | 5_4:+10091835 | None:intergenic |
| TGGGTGATGGTATACCTTAC+GGG | 0.429124 | 5_4:+10087686 | None:intergenic |
| ACAAGCCAAGAAAAGAGAAC+AGG | 0.429228 | 5_4:-10086663 | Msa0836610:CDS |
| TGCAAATGGAGCAGCAGCCT+TGG | 0.433833 | 5_4:+10090031 | None:intergenic |
| AACCTGTGAGTAAGATCCTT+TGG | 0.435314 | 5_4:+10089007 | None:intergenic |
| GCGAGAAGGGGACCGAGAAC+GGG | 0.441052 | 5_4:+10086261 | None:intergenic |
| CAAAAGAATATGGGGTCAAA+AGG | 0.442771 | 5_4:-10088851 | Msa0836610:CDS |
| CCCAACCTGTCTGATGCAAA+TGG | 0.449975 | 5_4:+10090017 | None:intergenic |
| TGTGATTTGCGAGAATTTGA+AGG | 0.450230 | 5_4:-10092043 | Msa0836610:five_prime_UTR |
| TACTATCCCGAATGAAATCT+AGG | 0.453036 | 5_4:+10090412 | None:intergenic |
| CGAGAAGCTACACGGATACC+TGG | 0.457347 | 5_4:-10088583 | Msa0836610:CDS |
| CTCCTTATTCTCGTTCTCCC+AGG | 0.459604 | 5_4:-10086213 | Msa0836610:intron |
| GGCAAGAAGGTCGGAGAAGA+AGG | 0.460367 | 5_4:-10092002 | Msa0836610:CDS |
| AGATAATTGCAAAAGAATAT+GGG | 0.462979 | 5_4:-10088860 | Msa0836610:CDS |
| TGCTCTCCTAGATTTCATTC+GGG | 0.465274 | 5_4:-10090418 | Msa0836610:CDS |
| ATAGGCGTCGCAGCCGCAGC+AGG | 0.465591 | 5_4:-10086592 | Msa0836610:CDS |
| AAGGATCTTACTCACAGGTT+GGG | 0.468137 | 5_4:-10089004 | Msa0836610:CDS |
| CTGCTCCATTTGCATCAGAC+AGG | 0.468882 | 5_4:-10090022 | Msa0836610:intron |
| AGGGAAATTCATTCATTCAT+CGG | 0.473574 | 5_4:-10092133 | Msa0836610:five_prime_UTR |
| TATATACATGCAGGGAATCA+AGG | 0.473761 | 5_4:-10088413 | Msa0836610:intron |
| TAAGATCCTTTGGTTGCAGC+AGG | 0.477039 | 5_4:+10089017 | None:intergenic |
| TGCGATTAGGGGACCGAGAA+CGG | 0.478186 | 5_4:+10086284 | None:intergenic |
| CTGGAGAAGCAGATGGAACT+AGG | 0.485701 | 5_4:-10088119 | Msa0836610:CDS |
| CATTCATTCATCGGGTTGGT+GGG | 0.486026 | 5_4:-10092124 | Msa0836610:five_prime_UTR |
| CGGGGAGTAGGACCGTGATC+TGG | 0.488896 | 5_4:+10088242 | None:intergenic |
| TGGAACTCGTGTGCTACATC+AGG | 0.490057 | 5_4:-10088563 | Msa0836610:CDS |
| GCGGAGAACGAGTGCGAGAA+GGG | 0.491633 | 5_4:+10086248 | None:intergenic |
| TATACCTTTGCAGATTTGAT+GGG | 0.497057 | 5_4:-10090443 | Msa0836610:intron |
| AACTGAGTCGTAAGGAAAGA+AGG | 0.499230 | 5_4:-10088636 | Msa0836610:CDS |
| TCTGGTGTATCCGTTGATAA+AGG | 0.500146 | 5_4:-10087728 | Msa0836610:CDS |
| GTAGAAGTCCAAGTAGAAGC+AGG | 0.500172 | 5_4:-10086339 | Msa0836610:CDS |
| CTAGTCGATTGAGTAGGTAT+AGG | 0.500217 | 5_4:-10086610 | Msa0836610:CDS |
| TCATTCATTCATCGGGTTGG+TGG | 0.503410 | 5_4:-10092125 | Msa0836610:five_prime_UTR |
| TGATTAACTGCAGAAGGTAC+AGG | 0.506954 | 5_4:-10086366 | Msa0836610:intron |
| TGCGAGAAGGGGACCGAGAA+CGG | 0.508604 | 5_4:+10086260 | None:intergenic |
| CGAGAATAAGCTTCGTAAGT+AGG | 0.508612 | 5_4:+10088384 | None:intergenic |
| GAATATGGGGTCAAAAGGTA+TGG | 0.513227 | 5_4:-10088846 | Msa0836610:CDS |
| AAAGAGAACAGGAGCGACAG+AGG | 0.514412 | 5_4:-10086652 | Msa0836610:CDS |
| TCTCTCTCTTTCAACTTGAG+AGG | 0.516754 | 5_4:+10088609 | None:intergenic |
| CAATCCTTGTTGATCTTCGG+TGG | 0.520275 | 5_4:+10091838 | None:intergenic |
| GACTTTAGCACCTTTATCAA+CGG | 0.520392 | 5_4:+10087718 | None:intergenic |
| AGATTGCACACAAGCCTCGC+TGG | 0.522876 | 5_4:+10086051 | None:intergenic |
| TCAGGCTAAGAAACCGTTCA+AGG | 0.524214 | 5_4:-10086103 | Msa0836610:CDS |
| CCTATGCAAGGCGTTATTCA+CGG | 0.524561 | 5_4:-10088218 | Msa0836610:CDS |
| AATTCATTCATTCATCGGGT+TGG | 0.526146 | 5_4:-10092128 | Msa0836610:five_prime_UTR |
| TTCCTCAGGATACCCTGGAA+TGG | 0.529350 | 5_4:-10090579 | Msa0836610:intron |
| AGCGATGATAGCAATGATGA+AGG | 0.531426 | 5_4:-10088888 | Msa0836610:CDS |
| GTGTGATAAAATACCTTGGT+GGG | 0.539061 | 5_4:+10086555 | None:intergenic |
| AAAGGATCTTACTCACAGGT+TGG | 0.542897 | 5_4:-10089005 | Msa0836610:CDS |
| ATGGGGTCAAAAGGTATGGT+TGG | 0.544068 | 5_4:-10088842 | Msa0836610:CDS |
| CTCGAGTTGATACATTAAAC+CGG | 0.548200 | 5_4:-10088062 | Msa0836610:intron |
| ATATCTTGTTTCCCATTCCA+GGG | 0.548452 | 5_4:+10090567 | None:intergenic |
| TGCGGAGAACGAGTGCGAGA+AGG | 0.549507 | 5_4:+10086247 | None:intergenic |
| TAATGTATCAACTCGAGATG+TGG | 0.554923 | 5_4:+10088068 | None:intergenic |
| AATAACGCCTTGCATAGGAC+GGG | 0.555643 | 5_4:+10088223 | None:intergenic |
| GTAGAGGAAACTGAGTCGTA+AGG | 0.556893 | 5_4:-10088644 | Msa0836610:intron |
| AATGTATCAACTCGAGATGT+GGG | 0.557381 | 5_4:+10088069 | None:intergenic |
| ATTTGCGAGAATTTGAAGGA+AGG | 0.561861 | 5_4:-10092039 | Msa0836610:five_prime_UTR |
| GTGCAATCAATTCAAGTCGT+TGG | 0.564747 | 5_4:-10091902 | Msa0836610:CDS |
| TGAAACATTGTATGCATGAA+AGG | 0.566134 | 5_4:-10086074 | Msa0836610:CDS |
| GGGCTCTTAAAACCTCAACC+AGG | 0.567364 | 5_4:-10086859 | Msa0836610:CDS |
| CCTACTCCCCGTCCTATGCA+AGG | 0.568143 | 5_4:-10088230 | Msa0836610:CDS |
| GCGATGATAGCAATGATGAA+GGG | 0.569721 | 5_4:-10088887 | Msa0836610:CDS |
| CGAAGATGACGAGGATGATG+AGG | 0.571273 | 5_4:-10088919 | Msa0836610:CDS |
| ACGACTTGAATTGATTGCAC+AGG | 0.573876 | 5_4:+10091905 | None:intergenic |
| ATCGGGATTTAATAAAGCAT+CGG | 0.577658 | 5_4:-10090320 | Msa0836610:CDS |
| AAAATCAATCTCAATTGTCA+GGG | 0.581700 | 5_4:-10092152 | Msa0836610:five_prime_UTR |
| AGAATACATAACTGAATTTG+GGG | 0.582675 | 5_4:-10088145 | Msa0836610:CDS |
| TGCTACATCAGGACCCCTAC+CGG | 0.582784 | 5_4:-10088552 | Msa0836610:intron |
| AGATGTGGCATGAGGCAAGA+AGG | 0.585460 | 5_4:-10092015 | Msa0836610:CDS |
| CATGGATAAGAAAGCCAAAG+AGG | 0.585701 | 5_4:-10088811 | Msa0836610:CDS |
| CTGAAACTAGTCGATTGAGT+AGG | 0.588625 | 5_4:-10086616 | Msa0836610:CDS |
| TCAACGGATACACCAGAAGC+AGG | 0.590050 | 5_4:+10087734 | None:intergenic |
| TAGAAGTCCAAGTAGAAGCA+GGG | 0.590908 | 5_4:-10086338 | Msa0836610:CDS |
| AGGCAAAAGGAGATAATCAA+AGG | 0.590916 | 5_4:-10088780 | Msa0836610:CDS |
| AAATCTAGAGATGGAGGCCA+AGG | 0.591377 | 5_4:-10090048 | Msa0836610:CDS |
| ATACGACGGAAATGGTAAAG+AGG | 0.596376 | 5_4:-10088976 | Msa0836610:CDS |
| AAGTCTTGAAGCCACCCGTA+AGG | 0.597087 | 5_4:-10087700 | Msa0836610:intron |
| GAAGAAGGTCCATGACATGA+TGG | 0.597424 | 5_4:-10091987 | Msa0836610:CDS |
| TGTTTCATCAGTGCCTTGAA+CGG | 0.597979 | 5_4:+10086090 | None:intergenic |
| CGGAGAACGAGTGCGAGAAG+GGG | 0.598706 | 5_4:+10086249 | None:intergenic |
| TGATAGCAATGATGAAGGGA+TGG | 0.599977 | 5_4:-10088883 | Msa0836610:CDS |
| CCGTGAATAACGCCTTGCAT+AGG | 0.601191 | 5_4:+10088218 | None:intergenic |
| GATAATTGCAAAAGAATATG+GGG | 0.605763 | 5_4:-10088859 | Msa0836610:CDS |
| GCAACATGTAAATCTAGAGA+TGG | 0.608218 | 5_4:-10090057 | Msa0836610:CDS |
| TTAAAGGCAAGTGGTTCTGG+AGG | 0.608799 | 5_4:-10086880 | Msa0836610:CDS |
| AGAAGTCCAAGTAGAAGCAG+GGG | 0.610389 | 5_4:-10086337 | Msa0836610:CDS |
| TCACAGCCTGCTGCAACCAA+AGG | 0.610560 | 5_4:-10089023 | Msa0836610:CDS |
| GATTTCAGATGACGATGATG+AGG | 0.611188 | 5_4:-10088946 | Msa0836610:CDS |
| GCAGATGGAACTAGGCGTGA+AGG | 0.612922 | 5_4:-10088111 | Msa0836610:CDS |
| GAATAACGCCTTGCATAGGA+CGG | 0.613651 | 5_4:+10088222 | None:intergenic |
| GAGCAGCGTCCATCATGTCA+TGG | 0.613715 | 5_4:+10091978 | None:intergenic |
| CCGAGAACGGGTGCGATTAG+GGG | 0.613751 | 5_4:+10086273 | None:intergenic |
| AACCAAAGGATCTTACTCAC+AGG | 0.615408 | 5_4:-10089009 | Msa0836610:CDS |
| CCTTGCATAGGACGGGGAGT+AGG | 0.615985 | 5_4:+10088230 | None:intergenic |
| ACTCGAGATGTGGGAGATCG+CGG | 0.618313 | 5_4:+10088078 | None:intergenic |
| TAAGGAGAGCGTGAACGATG+CGG | 0.619732 | 5_4:+10086229 | None:intergenic |
| GGCTCTTAAAACCTCAACCA+GGG | 0.620273 | 5_4:-10086858 | Msa0836610:CDS |
| GCAGGTCAAGGTCCAGATCA+CGG | 0.623636 | 5_4:-10088254 | Msa0836610:intron |
| GGTGTGATAAAATACCTTGG+TGG | 0.625016 | 5_4:+10086554 | None:intergenic |
| TTAATAAAGCATCGGCGTAG+AGG | 0.625301 | 5_4:-10090312 | Msa0836610:CDS |
| ACATGTAAATCTAGAGATGG+AGG | 0.626918 | 5_4:-10090054 | Msa0836610:CDS |
| ATGTTGCAAAGCGTCCTCGT+CGG | 0.628314 | 5_4:+10090073 | None:intergenic |
| GTGGCATGAGGCAAGAAGGT+CGG | 0.629760 | 5_4:-10092011 | Msa0836610:CDS |
| AACGACTGTAACTCCTGCTG+CGG | 0.631562 | 5_4:+10086579 | None:intergenic |
| TTTGCTAGTGCTGAGCCTGA+AGG | 0.633784 | 5_4:+10086904 | None:intergenic |
| GAGTCGTAAGGAAAGAAGGA+AGG | 0.634052 | 5_4:-10088632 | Msa0836610:CDS |
| CTAGCAAAGTTAAAGGCAAG+TGG | 0.638031 | 5_4:-10086889 | Msa0836610:CDS |
| GTTTACATATTGCTCCCAAG+TGG | 0.639802 | 5_4:-10086028 | Msa0836610:CDS |
| AATTTGAAGGAAGGAAGATG+TGG | 0.640876 | 5_4:-10092030 | Msa0836610:exon |
| TGTCCAGGAAAAGTCTGAAG+AGG | 0.644395 | 5_4:-10090379 | Msa0836610:CDS |
| TGTGATAAAATACCTTGGTG+GGG | 0.644679 | 5_4:+10086556 | None:intergenic |
| AGAGAGAGCGAGAAGCTACA+CGG | 0.650224 | 5_4:-10088591 | Msa0836610:CDS |
| CGAGATGTGGGAGATCGCGG+TGG | 0.662862 | 5_4:+10088081 | None:intergenic |
| TAAAGGCAAGTGGTTCTGGA+GGG | 0.663853 | 5_4:-10086879 | Msa0836610:CDS |
| ATAACGCCTTGCATAGGACG+GGG | 0.672285 | 5_4:+10088224 | None:intergenic |
| GTTACAGTCGTTCCCCACCA+AGG | 0.676212 | 5_4:-10086568 | Msa0836610:intron |
| AGGAAGGAAGATGTGGCATG+AGG | 0.678562 | 5_4:-10092023 | Msa0836610:exon |
| CAAGCCACCGAAGATCAACA+AGG | 0.682803 | 5_4:-10091842 | Msa0836610:CDS |
| GTGATGGTATACCTTACGGG+TGG | 0.693583 | 5_4:+10087689 | None:intergenic |
| GCTCTTAAAACCTCAACCAG+GGG | 0.694956 | 5_4:-10086857 | Msa0836610:CDS |
| GTTTACCTTGCAAAACGTCG+CGG | 0.695099 | 5_4:-10091932 | Msa0836610:CDS |
| TGAGGAAGACGAAGATGACG+AGG | 0.698746 | 5_4:-10088928 | Msa0836610:CDS |
| GAATACATAACTGAATTTGG+GGG | 0.701409 | 5_4:-10088144 | Msa0836610:CDS |
| AATGGTAACAGTTACCGACG+AGG | 0.731571 | 5_4:-10090087 | Msa0836610:intron |
| GTATGCATGAAAGGCCAGCG+AGG | 0.750427 | 5_4:-10086065 | Msa0836610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAATATAGAAAAAA+TGG | + | chr5_4:10086370-10086389 | None:intergenic | 10.0% |
| !!! | TTAAAATTGATTCTATAATT+TGG | - | chr5_4:10086410-10086429 | Msa0836610:intron | 10.0% |
| !!! | TAAAATTGATTCTATAATTT+GGG | - | chr5_4:10086411-10086430 | Msa0836610:intron | 10.0% |
| !!! | TTAAAATTGATTCTATAATT+TGG | - | chr5_4:10086410-10086429 | Msa0836610:intron | 10.0% |
| !!! | TAAAATTGATTCTATAATTT+GGG | - | chr5_4:10086411-10086430 | Msa0836610:intron | 10.0% |
| !!! | AAATAGCATAATTTTATTAA+CGG | + | chr5_4:10091733-10091752 | None:intergenic | 10.0% |
| !!! | TAAATTATCTTATTTGAAGT+AGG | + | chr5_4:10086528-10086547 | None:intergenic | 15.0% |
| !! | TGAAACAAATGTAATAATTT+AGG | - | chr5_4:10086997-10087016 | Msa0836610:intron | 15.0% |
| !! | GAAACAAATGTAATAATTTA+GGG | - | chr5_4:10086998-10087017 | Msa0836610:intron | 15.0% |
| !!! | TTTTTTTTTCTTCCATTAAA+TGG | - | chr5_4:10087060-10087079 | Msa0836610:intron | 15.0% |
| !! | TAAAACATATAATTCGTTTA+TGG | - | chr5_4:10087533-10087552 | Msa0836610:intron | 15.0% |
| !! | AAATAAGTTTCTGATAAAAA+GGG | + | chr5_4:10088509-10088528 | None:intergenic | 15.0% |
| !! | TAAATAAGTTTCTGATAAAA+AGG | + | chr5_4:10088510-10088529 | None:intergenic | 15.0% |
| !!! | TTTTTATCAGAAACTTATTT+AGG | - | chr5_4:10088509-10088528 | Msa0836610:intron | 15.0% |
| !!! | ATTTCTTTATGTAGTAATTT+TGG | - | chr5_4:10088888-10088907 | Msa0836610:CDS | 15.0% |
| !!! | ATATCTTATAAATTTTGTAG+AGG | - | chr5_4:10089502-10089521 | Msa0836610:intron | 15.0% |
| !!! | AAAATATCAATATTTTCTAC+CGG | + | chr5_4:10089632-10089651 | None:intergenic | 15.0% |
| !!! | ATTCTAAAACCATAAATAAT+TGG | + | chr5_4:10090211-10090230 | None:intergenic | 15.0% |
| !!! | TATATCCTTTTTTTTTCTTT+CGG | - | chr5_4:10091138-10091157 | Msa0836610:intron | 15.0% |
| !!! | AATAGCATAATTTTATTAAC+GGG | + | chr5_4:10091732-10091751 | None:intergenic | 15.0% |
| !! | AAACTATCGAAATCAAAATT+AGG | - | chr5_4:10086076-10086095 | Msa0836610:CDS | 20.0% |
| !! | AACTATCGAAATCAAAATTA+GGG | - | chr5_4:10086077-10086096 | Msa0836610:CDS | 20.0% |
| !! | AAATATAGAAAAAATGGAGA+AGG | + | chr5_4:10086364-10086383 | None:intergenic | 20.0% |
| !!! | ATTCTATAATTTGGGATTAA+TGG | - | chr5_4:10086419-10086438 | Msa0836610:intron | 20.0% |
| !! | TTTCTATTCATGATCAAAAT+TGG | - | chr5_4:10086908-10086927 | Msa0836610:CDS | 20.0% |
| !! | TTCTATTCATGATCAAAATT+GGG | - | chr5_4:10086909-10086928 | Msa0836610:CDS | 20.0% |
| !!! | AACTAACTTAATTACACTTT+TGG | + | chr5_4:10087042-10087061 | None:intergenic | 20.0% |
| !!! | TTTTACTAACAAAAATTCAG+AGG | + | chr5_4:10087518-10087537 | None:intergenic | 20.0% |
| !!! | TTATAATTCATTTTTTCCTC+AGG | - | chr5_4:10087569-10087588 | Msa0836610:intron | 20.0% |
| !! | TATAAACAGTTTGATTATTG+TGG | - | chr5_4:10087919-10087938 | Msa0836610:intron | 20.0% |
| !! | ATAAAATTGTAAATAGCTGT+TGG | - | chr5_4:10088263-10088282 | Msa0836610:intron | 20.0% |
| !!! | TTTACATGAAAACAATTTTC+TGG | + | chr5_4:10088475-10088494 | None:intergenic | 20.0% |
| !!! | AATTGTTTTCATGTAAATTC+AGG | - | chr5_4:10088478-10088497 | Msa0836610:intron | 20.0% |
| !! | CATAAAGAAATAGACAATTA+TGG | + | chr5_4:10088879-10088898 | None:intergenic | 20.0% |
| !! | AGATAATTGCAAAAGAATAT+GGG | - | chr5_4:10089302-10089321 | Msa0836610:intron | 20.0% |
| !!! | TCAGTTATGTATTCTATTTT+AGG | + | chr5_4:10090012-10090031 | None:intergenic | 20.0% |
| !! | ATAGAATACATAACTGAATT+TGG | - | chr5_4:10090015-10090034 | Msa0836610:intron | 20.0% |
| !! | TAGAATACATAACTGAATTT+GGG | - | chr5_4:10090016-10090035 | Msa0836610:intron | 20.0% |
| !! | ATTATGCAAAATTCATTTCA+GGG | + | chr5_4:10090308-10090327 | None:intergenic | 20.0% |
| !! | AATTATGCAAAATTCATTTC+AGG | + | chr5_4:10090309-10090328 | None:intergenic | 20.0% |
| !!! | ATGTGAATAGAGTATTAAAA+TGG | - | chr5_4:10090514-10090533 | Msa0836610:intron | 20.0% |
| !! | AAATTCCGAAAGAAAAAAAA+AGG | + | chr5_4:10091146-10091165 | None:intergenic | 20.0% |
| !! | TTCGGAATTTATTATTACAA+TGG | - | chr5_4:10091156-10091175 | Msa0836610:intron | 20.0% |
| !! | TCGGAATTTATTATTACAAT+GGG | - | chr5_4:10091157-10091176 | Msa0836610:intron | 20.0% |
| !!! | TGTAATTTGTGTAACTTTAT+TGG | - | chr5_4:10091648-10091667 | Msa0836610:intron | 20.0% |
| !! | CATAATATTAATTAAACCAG+AGG | + | chr5_4:10091778-10091797 | None:intergenic | 20.0% |
| ! | AAAATCAATCTCAATTGTCA+GGG | - | chr5_4:10086010-10086029 | Msa0836610:CDS | 25.0% |
| !!! | TTTTGATTTCGATAGTTTCA+GGG | + | chr5_4:10086074-10086093 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTCGATAGTTTC+AGG | + | chr5_4:10086075-10086094 | None:intergenic | 25.0% |
| !!! | GTAATTTAGGATCTTTTAGA+TGG | - | chr5_4:10086500-10086519 | Msa0836610:intron | 25.0% |
| ! | TTTGTTTATTTCACTGTTTC+TGG | - | chr5_4:10086548-10086567 | Msa0836610:intron | 25.0% |
| ! | AATTGATGTATTCAACGTAA+GGG | - | chr5_4:10086574-10086593 | Msa0836610:CDS | 25.0% |
| ! | GAGAAAAAAAATAAGCTCAT+TGG | - | chr5_4:10086597-10086616 | Msa0836610:CDS | 25.0% |
| !!! | TAATTTTAGTACAATGAGTG+AGG | - | chr5_4:10086677-10086696 | Msa0836610:CDS | 25.0% |
| ! | ATTTAATCAGTATGCATTTC+TGG | - | chr5_4:10086702-10086721 | Msa0836610:intron | 25.0% |
| ! | TGAGCAAAAACAAAATGATA+GGG | + | chr5_4:10086743-10086762 | None:intergenic | 25.0% |
| !!! | CTTTTTTAAATCGAGCTTTT+AGG | - | chr5_4:10086778-10086797 | Msa0836610:intron | 25.0% |
| !! | GACCAAAAATCATCATTTTA+GGG | + | chr5_4:10086854-10086873 | None:intergenic | 25.0% |
| !! | CTGCTAAAAATCAAACTTTT+GGG | + | chr5_4:10086876-10086895 | None:intergenic | 25.0% |
| !! | TTTTGGTCATCAAATTGTTT+TGG | + | chr5_4:10087025-10087044 | None:intergenic | 25.0% |
| !! | TTTACGCTTTTACCATTTAA+TGG | + | chr5_4:10087075-10087094 | None:intergenic | 25.0% |
| ! | AATTGTTTGATCAAGCTAAA+AGG | - | chr5_4:10087219-10087238 | Msa0836610:intron | 25.0% |
| ! | AATTAAGAAAAGCGGAAAAT+AGG | + | chr5_4:10087394-10087413 | None:intergenic | 25.0% |
| !!! | AACAAGATATTTTGATTGAC+AGG | - | chr5_4:10087608-10087627 | Msa0836610:intron | 25.0% |
| !! | TTGTTAATTTTGAGCGTTAT+CGG | - | chr5_4:10087824-10087843 | Msa0836610:intron | 25.0% |
| !!! | TTCACAAACTTGGTTTTTAA+TGG | - | chr5_4:10088057-10088076 | Msa0836610:intron | 25.0% |
| ! | TCCATATATCTTTATATGCA+TGG | - | chr5_4:10088231-10088250 | Msa0836610:CDS | 25.0% |
| ! | ACCATGCATATAAAGATATA+TGG | + | chr5_4:10088235-10088254 | None:intergenic | 25.0% |
| ! | TCTTAATGCAAATAATCAGA+TGG | - | chr5_4:10088305-10088324 | Msa0836610:intron | 25.0% |
| ! | GAGATAATTGCAAAAGAATA+TGG | - | chr5_4:10089301-10089320 | Msa0836610:intron | 25.0% |
| ! | GATAATTGCAAAAGAATATG+GGG | - | chr5_4:10089303-10089322 | Msa0836610:intron | 25.0% |
| ! | AGAATACATAACTGAATTTG+GGG | - | chr5_4:10090017-10090036 | Msa0836610:intron | 25.0% |
| ! | TCAATCTTGGCAATAATTAA+AGG | + | chr5_4:10090139-10090158 | None:intergenic | 25.0% |
| ! | TAATTATTGCCAAGATTGAT+TGG | - | chr5_4:10090140-10090159 | Msa0836610:intron | 25.0% |
| ! | TTTCCTGAACCAATTATTTA+TGG | - | chr5_4:10090199-10090218 | Msa0836610:intron | 25.0% |
| !! | AAACCATAAATAATTGGTTC+AGG | + | chr5_4:10090205-10090224 | None:intergenic | 25.0% |
| !!! | TTTTAGAATAGATCATGACT+AGG | - | chr5_4:10090222-10090241 | Msa0836610:intron | 25.0% |
| !! | GAGTATTAAAATGGTTTTTG+TGG | - | chr5_4:10090523-10090542 | Msa0836610:intron | 25.0% |
| ! | ATGGTAGAACTATATTGTTT+AGG | - | chr5_4:10090561-10090580 | Msa0836610:CDS | 25.0% |
| ! | AACATTGAATTATCTCTTGA+GGG | + | chr5_4:10090751-10090770 | None:intergenic | 25.0% |
| ! | ATATTATGATTAACTGCAGA+AGG | - | chr5_4:10091790-10091809 | Msa0836610:intron | 25.0% |
| CAAAATCAATCTCAATTGTC+AGG | - | chr5_4:10086009-10086028 | Msa0836610:CDS | 30.0% | |
| AGGGAAATTCATTCATTCAT+CGG | - | chr5_4:10086029-10086048 | Msa0836610:CDS | 30.0% | |
| ! | TTTGATTTCGATAGTTTCAG+GGG | + | chr5_4:10086073-10086092 | None:intergenic | 30.0% |
| TAACAATCCTTGTTGATCTT+CGG | + | chr5_4:10086330-10086349 | None:intergenic | 30.0% | |
| TGGGATTAATGGTGTAATTT+AGG | - | chr5_4:10086487-10086506 | Msa0836610:intron | 30.0% | |
| GAATTGATGTATTCAACGTA+AGG | - | chr5_4:10086573-10086592 | Msa0836610:CDS | 30.0% | |
| ATTGATGTATTCAACGTAAG+GGG | - | chr5_4:10086575-10086594 | Msa0836610:CDS | 30.0% | |
| GTTGATACTCTTTGTATGTT+TGG | - | chr5_4:10086650-10086669 | Msa0836610:CDS | 30.0% | |
| !! | ATGCATTTCTGGTAATGATA+AGG | - | chr5_4:10086713-10086732 | Msa0836610:intron | 30.0% |
| GTGAGCAAAAACAAAATGAT+AGG | + | chr5_4:10086744-10086763 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTGCTCACGAAAA+TGG | - | chr5_4:10086749-10086768 | Msa0836610:intron | 30.0% |
| AAGCTCGATTTAAAAAAGAG+AGG | + | chr5_4:10086776-10086795 | None:intergenic | 30.0% | |
| GCAACAAATGTGATAATTGA+TGG | + | chr5_4:10086805-10086824 | None:intergenic | 30.0% | |
| ! | GGACCAAAAATCATCATTTT+AGG | + | chr5_4:10086855-10086874 | None:intergenic | 30.0% |
| ! | GCTGCTAAAAATCAAACTTT+TGG | + | chr5_4:10086877-10086896 | None:intergenic | 30.0% |
| !!! | TTGATTTTTAGCAGCAATAG+TGG | - | chr5_4:10086882-10086901 | Msa0836610:CDS | 30.0% |
| !!! | GACATTAATTTGCCACTTTT+GGG | - | chr5_4:10086931-10086950 | Msa0836610:intron | 30.0% |
| ! | TCCTATATGCATTGATGAAA+GGG | - | chr5_4:10087100-10087119 | Msa0836610:intron | 30.0% |
| TTGGATTGAGAGTAATTCAA+TGG | - | chr5_4:10087134-10087153 | Msa0836610:intron | 30.0% | |
| ATTCTCATATTCGAAGAGAA+TGG | - | chr5_4:10087256-10087275 | Msa0836610:intron | 30.0% | |
| CCAAGCAAAATTAAGAAAAG+CGG | + | chr5_4:10087402-10087421 | None:intergenic | 30.0% | |
| ! | CGCTTTTCTTAATTTTGCTT+GGG | - | chr5_4:10087400-10087419 | Msa0836610:intron | 30.0% |
| ! | AAATCTGCAAAGGTATAGAT+AGG | + | chr5_4:10087716-10087735 | None:intergenic | 30.0% |
| TATACCTTTGCAGATTTGAT+GGG | - | chr5_4:10087719-10087738 | Msa0836610:CDS | 30.0% | |
| ! | TGTTAATTTTGAGCGTTATC+GGG | - | chr5_4:10087825-10087844 | Msa0836610:intron | 30.0% |
| ATCGGGATTTAATAAAGCAT+CGG | - | chr5_4:10087842-10087861 | Msa0836610:intron | 30.0% | |
| CTGATAATAATGCCATAGAA+CGG | - | chr5_4:10087978-10087997 | Msa0836610:intron | 30.0% | |
| CATAGCTAAATTCACAAACT+TGG | - | chr5_4:10088047-10088066 | Msa0836610:intron | 30.0% | |
| ! | ATGTTTGTTGAGTGCATATT+TGG | + | chr5_4:10088675-10088694 | None:intergenic | 30.0% |
| TGTCTATAATGAGAACAATG+GGG | + | chr5_4:10088709-10088728 | None:intergenic | 30.0% | |
| CTGTCTATAATGAGAACAAT+GGG | + | chr5_4:10088710-10088729 | None:intergenic | 30.0% | |
| ACTGTCTATAATGAGAACAA+TGG | + | chr5_4:10088711-10088730 | None:intergenic | 30.0% | |
| !!! | TTTTTAGTTCATCTAAGCTG+TGG | + | chr5_4:10088807-10088826 | None:intergenic | 30.0% |
| AAGAAATAGACAATTATGGC+TGG | + | chr5_4:10088875-10088894 | None:intergenic | 30.0% | |
| !! | TTTGTCTATTGATTCTTGCA+TGG | - | chr5_4:10088974-10088993 | Msa0836610:CDS | 30.0% |
| AGCTGCAAATTATAGATCTA+CGG | + | chr5_4:10089011-10089030 | None:intergenic | 30.0% | |
| !!! | ATATTTTGAGATTACCGTGT+AGG | - | chr5_4:10089465-10089484 | Msa0836610:intron | 30.0% |
| ! | ATCAATATTTTCTACCGGTA+GGG | + | chr5_4:10089627-10089646 | None:intergenic | 30.0% |
| ! | TATCAATATTTTCTACCGGT+AGG | + | chr5_4:10089628-10089647 | None:intergenic | 30.0% |
| TCAGATATTCTTCGTTCAAT+CGG | + | chr5_4:10089662-10089681 | None:intergenic | 30.0% | |
| !! | TTCTTGCATACTAGTCTTAA+TGG | - | chr5_4:10089717-10089736 | Msa0836610:intron | 30.0% |
| TTGACTCAATATATACATGC+AGG | - | chr5_4:10089740-10089759 | Msa0836610:intron | 30.0% | |
| TGACTCAATATATACATGCA+GGG | - | chr5_4:10089741-10089760 | Msa0836610:intron | 30.0% | |
| AACGAGAAGAATGAGTAAAA+TGG | + | chr5_4:10089850-10089869 | None:intergenic | 30.0% | |
| TTTACTCATTCTTCTCGTTA+AGG | - | chr5_4:10089851-10089870 | Msa0836610:intron | 30.0% | |
| CTCGTTAAGGAGAATTTATT+TGG | - | chr5_4:10089864-10089883 | Msa0836610:intron | 30.0% | |
| GAATACATAACTGAATTTGG+GGG | - | chr5_4:10090018-10090037 | Msa0836610:intron | 30.0% | |
| ! | ATTGGTTCAGGAAACAATAT+GGG | + | chr5_4:10090193-10090212 | None:intergenic | 30.0% |
| ! | AATTGGTTCAGGAAACAATA+TGG | + | chr5_4:10090194-10090213 | None:intergenic | 30.0% |
| TAATATTTACATGCAGCTAC+AGG | + | chr5_4:10090333-10090352 | None:intergenic | 30.0% | |
| ACATTCACATATACACTGTT+GGG | + | chr5_4:10090498-10090517 | None:intergenic | 30.0% | |
| ! | TTTTTGTGGTTTCATCTGTT+AGG | - | chr5_4:10090537-10090556 | Msa0836610:intron | 30.0% |
| CATTCTTAAAGATGTACACA+AGG | - | chr5_4:10090630-10090649 | Msa0836610:intron | 30.0% | |
| GAACATTGAATTATCTCTTG+AGG | + | chr5_4:10090752-10090771 | None:intergenic | 30.0% | |
| !! | ATTCTGTTCTGTTGTTTCTT+TGG | + | chr5_4:10090843-10090862 | None:intergenic | 30.0% |
| AATGCTGATGCAAAATCTAA+TGG | + | chr5_4:10091054-10091073 | None:intergenic | 30.0% | |
| TACAAATCCTAGAGTATACA+AGG | + | chr5_4:10091632-10091651 | None:intergenic | 30.0% | |
| GAAAGACATTAATTTCACCT+GGG | + | chr5_4:10091969-10091988 | None:intergenic | 30.0% | |
| AGAAAGACATTAATTTCACC+TGG | + | chr5_4:10091970-10091989 | None:intergenic | 30.0% | |
| AAAGAATGATTGAGATGATG+AGG | + | chr5_4:10092017-10092036 | None:intergenic | 30.0% | |
| ATTCAGAAAGTTGACATTTC+AGG | - | chr5_4:10092041-10092060 | Msa0836610:five_prime_UTR | 30.0% | |
| TGAAACATTGTATGCATGAA+AGG | - | chr5_4:10092088-10092107 | Msa0836610:intron | 30.0% | |
| GGGAAATTCATTCATTCATC+GGG | - | chr5_4:10086030-10086049 | Msa0836610:CDS | 35.0% | |
| AATTCATTCATTCATCGGGT+TGG | - | chr5_4:10086034-10086053 | Msa0836610:CDS | 35.0% | |
| ! | TGTGATTTGCGAGAATTTGA+AGG | - | chr5_4:10086119-10086138 | Msa0836610:intron | 35.0% |
| ATTTGCGAGAATTTGAAGGA+AGG | - | chr5_4:10086123-10086142 | Msa0836610:intron | 35.0% | |
| AATTTGAAGGAAGGAAGATG+TGG | - | chr5_4:10086132-10086151 | Msa0836610:intron | 35.0% | |
| !! | GTTTATTTCACTGTTTCTGG+AGG | - | chr5_4:10086551-10086570 | Msa0836610:intron | 35.0% |
| ! | TTTGCACCTGATCAAGTTTT+TGG | - | chr5_4:10086828-10086847 | Msa0836610:CDS | 35.0% |
| ! | GGCCCTAAAATGATGATTTT+TGG | - | chr5_4:10086849-10086868 | Msa0836610:CDS | 35.0% |
| !!! | GGACATTAATTTGCCACTTT+TGG | - | chr5_4:10086930-10086949 | Msa0836610:intron | 35.0% |
| ! | CTCCTATATGCATTGATGAA+AGG | - | chr5_4:10087099-10087118 | Msa0836610:intron | 35.0% |
| ACCCTTTCATCAATGCATAT+AGG | + | chr5_4:10087104-10087123 | None:intergenic | 35.0% | |
| GATTGAGAGTAATTCAATGG+TGG | - | chr5_4:10087137-10087156 | Msa0836610:intron | 35.0% | |
| ! | CAATTGTTTCTTAACCTCCA+GGG | + | chr5_4:10087195-10087214 | None:intergenic | 35.0% |
| ! | TCAATTGTTTCTTAACCTCC+AGG | + | chr5_4:10087196-10087215 | None:intergenic | 35.0% |
| ! | AATGGAATAATTGTGCCGAT+AGG | - | chr5_4:10087274-10087293 | Msa0836610:intron | 35.0% |
| !! | CCGCTTTTCTTAATTTTGCT+TGG | - | chr5_4:10087399-10087418 | Msa0836610:intron | 35.0% |
| ! | ATATCTTGTTTCCCATTCCA+GGG | + | chr5_4:10087598-10087617 | None:intergenic | 35.0% |
| ! | AATATCTTGTTTCCCATTCC+AGG | + | chr5_4:10087599-10087618 | None:intergenic | 35.0% |
| CTATACCTTTGCAGATTTGA+TGG | - | chr5_4:10087718-10087737 | Msa0836610:CDS | 35.0% | |
| TACTATCCCGAATGAAATCT+AGG | + | chr5_4:10087753-10087772 | None:intergenic | 35.0% | |
| ! | TCATTCGGGATAGTAGTTTT+AGG | - | chr5_4:10087758-10087777 | Msa0836610:CDS | 35.0% |
| CGTTCTATGGCATTATTATC+AGG | + | chr5_4:10087980-10087999 | None:intergenic | 35.0% | |
| ! | CTAGAAACTTTTCCGTTCTA+TGG | + | chr5_4:10087993-10088012 | None:intergenic | 35.0% |
| ! | CGGAAAAGTTTCTAGAAATC+AGG | - | chr5_4:10087998-10088017 | Msa0836610:intron | 35.0% |
| TTAGCTATGAAACTAATCCC+TGG | + | chr5_4:10088036-10088055 | None:intergenic | 35.0% | |
| GCAACATGTAAATCTAGAGA+TGG | - | chr5_4:10088105-10088124 | Msa0836610:CDS | 35.0% | |
| ACATGTAAATCTAGAGATGG+AGG | - | chr5_4:10088108-10088127 | Msa0836610:CDS | 35.0% | |
| AACAGTCAGTTAAAAATGCG+TGG | + | chr5_4:10088180-10088199 | None:intergenic | 35.0% | |
| !! | TTGTAAATAGCTGTTGGTTC+TGG | - | chr5_4:10088269-10088288 | Msa0836610:intron | 35.0% |
| !! | TGTAAATAGCTGTTGGTTCT+GGG | - | chr5_4:10088270-10088289 | Msa0836610:intron | 35.0% |
| TCAAAATAATCAGTAGCGCA+TGG | + | chr5_4:10088362-10088381 | None:intergenic | 35.0% | |
| ACTCGAGAGTTTGACAATAA+TGG | + | chr5_4:10088395-10088414 | None:intergenic | 35.0% | |
| ! | ACATTGAACCACTGTCTTTT+AGG | + | chr5_4:10088572-10088591 | None:intergenic | 35.0% |
| ACATGTTAAATGACAAGCGT+TGG | - | chr5_4:10088610-10088629 | Msa0836610:CDS | 35.0% | |
| GTACAAACTATTATCCTCAG+CGG | - | chr5_4:10088637-10088656 | Msa0836610:CDS | 35.0% | |
| AGTTTAGTCCAACTCTAACA+AGG | - | chr5_4:10088839-10088858 | Msa0836610:CDS | 35.0% | |
| GTTTAGTCCAACTCTAACAA+GGG | - | chr5_4:10088840-10088859 | Msa0836610:CDS | 35.0% | |
| TTTAGTCCAACTCTAACAAG+GGG | - | chr5_4:10088841-10088860 | Msa0836610:CDS | 35.0% | |
| AATAGACAATTATGGCTGGA+CGG | + | chr5_4:10088871-10088890 | None:intergenic | 35.0% | |
| CAAAAGAATATGGGGTCAAA+AGG | - | chr5_4:10089311-10089330 | Msa0836610:intron | 35.0% | |
| AAGCCAAAGAGGAACAAAAA+AGG | - | chr5_4:10089362-10089381 | Msa0836610:intron | 35.0% | |
| !!! | TTGCCTTTTTTGTTCCTCTT+TGG | + | chr5_4:10089368-10089387 | None:intergenic | 35.0% |
| AGAGGAACAAAAAAGGCAAA+AGG | - | chr5_4:10089369-10089388 | Msa0836610:intron | 35.0% | |
| AGGCAAAAGGAGATAATCAA+AGG | - | chr5_4:10089382-10089401 | Msa0836610:intron | 35.0% | |
| ACATTTCCACTTACAATTGC+AGG | + | chr5_4:10089412-10089431 | None:intergenic | 35.0% | |
| ACCAGTCAAAAAATCCTACA+CGG | + | chr5_4:10089482-10089501 | None:intergenic | 35.0% | |
| ! | TCAATATTTTCTACCGGTAG+GGG | + | chr5_4:10089626-10089645 | None:intergenic | 35.0% |
| TATATACATGCAGGGAATCA+AGG | - | chr5_4:10089749-10089768 | Msa0836610:intron | 35.0% | |
| ! | AAGCTTATTCTCGTTCTAGA+AGG | - | chr5_4:10089788-10089807 | Msa0836610:intron | 35.0% |
| ! | TTCTGACCTTTTCAATATGC+AGG | - | chr5_4:10089890-10089909 | Msa0836610:intron | 35.0% |
| AATGTATCAACTCGAGATGT+GGG | + | chr5_4:10090096-10090115 | None:intergenic | 35.0% | |
| TAATGTATCAACTCGAGATG+TGG | + | chr5_4:10090097-10090116 | None:intergenic | 35.0% | |
| !! | CTCGAGTTGATACATTAAAC+CGG | - | chr5_4:10090100-10090119 | Msa0836610:intron | 35.0% |
| ! | AGTTGATACATTAAACCGGT+CGG | - | chr5_4:10090104-10090123 | Msa0836610:intron | 35.0% |
| AAAGACTGTCCAATCAATCT+TGG | + | chr5_4:10090152-10090171 | None:intergenic | 35.0% | |
| GACTTTAGCACCTTTATCAA+CGG | + | chr5_4:10090447-10090466 | None:intergenic | 35.0% | |
| CACATTCACATATACACTGT+TGG | + | chr5_4:10090499-10090518 | None:intergenic | 35.0% | |
| ! | GTTTCTTTGGCATATTTCTG+TGG | + | chr5_4:10090830-10090849 | None:intergenic | 35.0% |
| TAATACTGCCATTCGATCAT+TGG | - | chr5_4:10091099-10091118 | Msa0836610:intron | 35.0% | |
| TTACAGTACCAATGATCGAA+TGG | + | chr5_4:10091110-10091129 | None:intergenic | 35.0% | |
| !! | ATCCTTTTAAGTCTCTCTTG+GGG | + | chr5_4:10091345-10091364 | None:intergenic | 35.0% |
| !! | GATCCTTTTAAGTCTCTCTT+GGG | + | chr5_4:10091346-10091365 | None:intergenic | 35.0% |
| !! | TGATCCTTTTAAGTCTCTCT+TGG | + | chr5_4:10091347-10091366 | None:intergenic | 35.0% |
| TGTGATAAAATACCTTGGTG+GGG | + | chr5_4:10091609-10091628 | None:intergenic | 35.0% | |
| GTGTGATAAAATACCTTGGT+GGG | + | chr5_4:10091610-10091629 | None:intergenic | 35.0% | |
| CAAGGTGTGATAAAATACCT+TGG | + | chr5_4:10091614-10091633 | None:intergenic | 35.0% | |
| TATCACACCTTGTATACTCT+AGG | - | chr5_4:10091622-10091641 | Msa0836610:intron | 35.0% | |
| ! | TCATAACACCTTGATGGTTA+AGG | + | chr5_4:10091678-10091697 | None:intergenic | 35.0% |
| GTTATGACTTCTCAGCAAAA+TGG | - | chr5_4:10091691-10091710 | Msa0836610:intron | 35.0% | |
| CAGCAAAATGGAATAGTGAA+TGG | - | chr5_4:10091703-10091722 | Msa0836610:intron | 35.0% | |
| AGAACTTGAGTGATATCTTC+TGG | + | chr5_4:10091853-10091872 | None:intergenic | 35.0% | |
| ! | TGTTTTCCTTCTAACCACTT+GGG | + | chr5_4:10092151-10092170 | None:intergenic | 35.0% |
| ACGACTTGAATTGATTGCAC+AGG | + | chr5_4:10086260-10086279 | None:intergenic | 40.0% | |
| GTGCAATCAATTCAAGTCGT+TGG | - | chr5_4:10086260-10086279 | Msa0836610:CDS | 40.0% | |
| TTAGGGCCAAAAACTTGATC+AGG | + | chr5_4:10086837-10086856 | None:intergenic | 40.0% | |
| ! | GGCCAAAATCACCATTTTCT+GGG | - | chr5_4:10086952-10086971 | Msa0836610:intron | 40.0% |
| ! | GCCAAAATCACCATTTTCTG+GGG | - | chr5_4:10086953-10086972 | Msa0836610:intron | 40.0% |
| ! | TCCCCAGAAAATGGTGATTT+TGG | + | chr5_4:10086957-10086976 | None:intergenic | 40.0% |
| !! | CACCATTTTCTGGGGAAAAA+AGG | - | chr5_4:10086961-10086980 | Msa0836610:intron | 40.0% |
| !!! | AGCCTTTTTTCCCCAGAAAA+TGG | + | chr5_4:10086966-10086985 | None:intergenic | 40.0% |
| TGAAAGGGTGACATGGAATT+TGG | - | chr5_4:10087115-10087134 | Msa0836610:intron | 40.0% | |
| !! | CCCATGATTTGCTAACCTAT+CGG | + | chr5_4:10087292-10087311 | None:intergenic | 40.0% |
| CCGATAGGTTAGCAAATCAT+GGG | - | chr5_4:10087289-10087308 | Msa0836610:intron | 40.0% | |
| AGTGAATCCCACTAAAAAGC+CGG | + | chr5_4:10087325-10087344 | None:intergenic | 40.0% | |
| TATTCTTGCCTGACATAGTC+GGG | + | chr5_4:10087349-10087368 | None:intergenic | 40.0% | |
| GTATTCTTGCCTGACATAGT+CGG | + | chr5_4:10087350-10087369 | None:intergenic | 40.0% | |
| CAAAATGCCAAATCCCAACT+AGG | + | chr5_4:10087456-10087475 | None:intergenic | 40.0% | |
| !! | TTTGAAGCATTGCAAGCTCT+TGG | - | chr5_4:10087472-10087491 | Msa0836610:intron | 40.0% |
| !!! | ATTTTTTCCTCAGGATACCC+TGG | - | chr5_4:10087578-10087597 | Msa0836610:intron | 40.0% |
| GTGCTCTCCTAGATTTCATT+CGG | - | chr5_4:10087743-10087762 | Msa0836610:CDS | 40.0% | |
| TGCTCTCCTAGATTTCATTC+GGG | - | chr5_4:10087744-10087763 | Msa0836610:CDS | 40.0% | |
| !! | TTAATAAAGCATCGGCGTAG+AGG | - | chr5_4:10087850-10087869 | Msa0836610:intron | 40.0% |
| ! | ACTGTCTTTTAGGCATATCG+AGG | + | chr5_4:10088562-10088581 | None:intergenic | 40.0% |
| TCGATATGCCTAAAAGACAG+TGG | - | chr5_4:10088561-10088580 | Msa0836610:CDS | 40.0% | |
| ATGAATCCAAGAGACTGATG+AGG | - | chr5_4:10088772-10088791 | Msa0836610:CDS | 40.0% | |
| AACCAAAGGATCTTACTCAC+AGG | - | chr5_4:10089153-10089172 | Msa0836610:intron | 40.0% | |
| AACCTGTGAGTAAGATCCTT+TGG | + | chr5_4:10089158-10089177 | None:intergenic | 40.0% | |
| AAAGGATCTTACTCACAGGT+TGG | - | chr5_4:10089157-10089176 | Msa0836610:intron | 40.0% | |
| AAGGATCTTACTCACAGGTT+GGG | - | chr5_4:10089158-10089177 | Msa0836610:intron | 40.0% | |
| ATACGACGGAAATGGTAAAG+AGG | - | chr5_4:10089186-10089205 | Msa0836610:intron | 40.0% | |
| GATTTCAGATGACGATGATG+AGG | - | chr5_4:10089216-10089235 | Msa0836610:intron | 40.0% | |
| AGCGATGATAGCAATGATGA+AGG | - | chr5_4:10089274-10089293 | Msa0836610:intron | 40.0% | |
| GCGATGATAGCAATGATGAA+GGG | - | chr5_4:10089275-10089294 | Msa0836610:intron | 40.0% | |
| TGATAGCAATGATGAAGGGA+TGG | - | chr5_4:10089279-10089298 | Msa0836610:intron | 40.0% | |
| GAATATGGGGTCAAAAGGTA+TGG | - | chr5_4:10089316-10089335 | Msa0836610:intron | 40.0% | |
| !! | GTATGGTTGGCTTGTTTACA+TGG | - | chr5_4:10089333-10089352 | Msa0836610:intron | 40.0% |
| CATGGATAAGAAAGCCAAAG+AGG | - | chr5_4:10089351-10089370 | Msa0836610:intron | 40.0% | |
| !!! | ACCGTGTAGGATTTTTTGAC+TGG | - | chr5_4:10089478-10089497 | Msa0836610:intron | 40.0% |
| AACTGAGTCGTAAGGAAAGA+AGG | - | chr5_4:10089526-10089545 | Msa0836610:intron | 40.0% | |
| TCTCTCTCTTTCAACTTGAG+AGG | + | chr5_4:10089556-10089575 | None:intergenic | 40.0% | |
| CGAGAATAAGCTTCGTAAGT+AGG | + | chr5_4:10089781-10089800 | None:intergenic | 40.0% | |
| CCTTGACCTGCATATTGAAA+AGG | + | chr5_4:10089899-10089918 | None:intergenic | 40.0% | |
| ! | CCTTTTCAATATGCAGGTCA+AGG | - | chr5_4:10089896-10089915 | Msa0836610:intron | 40.0% |
| AGATCATGACTAGGATTGTC+AGG | - | chr5_4:10090231-10090250 | Msa0836610:intron | 40.0% | |
| GATCATGACTAGGATTGTCA+GGG | - | chr5_4:10090232-10090251 | Msa0836610:intron | 40.0% | |
| TGATACCTCTACTGTATTGC+AGG | - | chr5_4:10090366-10090385 | Msa0836610:CDS | 40.0% | |
| ! | TCTGGTGTATCCGTTGATAA+AGG | - | chr5_4:10090434-10090453 | Msa0836610:intron | 40.0% |
| ! | TTGGGTGATGGTATACCTTA+CGG | + | chr5_4:10090480-10090499 | None:intergenic | 40.0% |
| ACATATACACTGTTGGGTGA+TGG | + | chr5_4:10090492-10090511 | None:intergenic | 40.0% | |
| GTGGTTTCATCTGTTAGGAA+TGG | - | chr5_4:10090542-10090561 | Msa0836610:intron | 40.0% | |
| !!! | GAGGGAACTTGTTTGTTTTG+TGG | + | chr5_4:10090733-10090752 | None:intergenic | 40.0% |
| TGGCAGAGGAGACAATTTAT+CGG | + | chr5_4:10090775-10090794 | None:intergenic | 40.0% | |
| GCTATCTGAGTATCTGACAT+TGG | + | chr5_4:10090795-10090814 | None:intergenic | 40.0% | |
| CTCAGCACTAGCAAAGTTAA+AGG | - | chr5_4:10091266-10091285 | Msa0836610:intron | 40.0% | |
| CTAGCAAAGTTAAAGGCAAG+TGG | - | chr5_4:10091273-10091292 | Msa0836610:intron | 40.0% | |
| AAGTTAAAGGCAAGTGGTTC+TGG | - | chr5_4:10091279-10091298 | Msa0836610:intron | 40.0% | |
| ACAAGCCAAGAAAAGAGAAC+AGG | - | chr5_4:10091499-10091518 | Msa0836610:intron | 40.0% | |
| CTGAAACTAGTCGATTGAGT+AGG | - | chr5_4:10091546-10091565 | Msa0836610:intron | 40.0% | |
| CTAGTCGATTGAGTAGGTAT+AGG | - | chr5_4:10091552-10091571 | Msa0836610:intron | 40.0% | |
| GGTGTGATAAAATACCTTGG+TGG | + | chr5_4:10091611-10091630 | None:intergenic | 40.0% | |
| TTGGAACACCTTAACCATCA+AGG | - | chr5_4:10091667-10091686 | Msa0836610:intron | 40.0% | |
| GAGAAGTCATAACACCTTGA+TGG | + | chr5_4:10091684-10091703 | None:intergenic | 40.0% | |
| ACCAGAGGAAAACAAAGCAA+GGG | + | chr5_4:10091763-10091782 | None:intergenic | 40.0% | |
| AACCAGAGGAAAACAAAGCA+AGG | + | chr5_4:10091764-10091783 | None:intergenic | 40.0% | |
| ! | TGATTAACTGCAGAAGGTAC+AGG | - | chr5_4:10091796-10091815 | Msa0836610:intron | 40.0% |
| TAGAAGTCCAAGTAGAAGCA+GGG | - | chr5_4:10091824-10091843 | Msa0836610:intron | 40.0% | |
| TGTTTCATCAGTGCCTTGAA+CGG | + | chr5_4:10092075-10092094 | None:intergenic | 40.0% | |
| GTTTACATATTGCTCCCAAG+TGG | - | chr5_4:10092134-10092153 | Msa0836610:five_prime_UTR | 40.0% | |
| ! | GTGTTTTCCTTCTAACCACT+TGG | + | chr5_4:10092152-10092171 | None:intergenic | 40.0% |
| !! | TCATTCATTCATCGGGTTGG+TGG | - | chr5_4:10086037-10086056 | Msa0836610:CDS | 45.0% |
| !! | CATTCATTCATCGGGTTGGT+GGG | - | chr5_4:10086038-10086057 | Msa0836610:CDS | 45.0% |
| GAAGAAGGTCCATGACATGA+TGG | - | chr5_4:10086175-10086194 | Msa0836610:intron | 45.0% | |
| ! | GCGACGTTTTGCAAGGTAAA+CGG | + | chr5_4:10086231-10086250 | None:intergenic | 45.0% |
| GTTTACCTTGCAAAACGTCG+CGG | - | chr5_4:10086230-10086249 | Msa0836610:CDS | 45.0% | |
| CAATCCTTGTTGATCTTCGG+TGG | + | chr5_4:10086327-10086346 | None:intergenic | 45.0% | |
| !! | TGGTGATTTTGGCCCAAAAG+TGG | + | chr5_4:10086946-10086965 | None:intergenic | 45.0% |
| ! | GGGCCAAAATCACCATTTTC+TGG | - | chr5_4:10086951-10086970 | Msa0836610:intron | 45.0% |
| ! | GCATTGATGAAAGGGTGACA+TGG | - | chr5_4:10087108-10087127 | Msa0836610:intron | 45.0% |
| GTTTCTTAACCTCCAGGGTA+TGG | + | chr5_4:10087190-10087209 | None:intergenic | 45.0% | |
| GCCGATAGGTTAGCAAATCA+TGG | - | chr5_4:10087288-10087307 | Msa0836610:intron | 45.0% | |
| AATCATGGGCATTCCTTGTC+CGG | - | chr5_4:10087303-10087322 | Msa0836610:intron | 45.0% | |
| ! | TTCCTTGTCCGGCTTTTTAG+TGG | - | chr5_4:10087314-10087333 | Msa0836610:intron | 45.0% |
| !! | TCCTTGTCCGGCTTTTTAGT+GGG | - | chr5_4:10087315-10087334 | Msa0836610:intron | 45.0% |
| ATTCACTTCCCGACTATGTC+AGG | - | chr5_4:10087338-10087357 | Msa0836610:intron | 45.0% | |
| GTTTGCACCCCAAAGAGAAA+GGG | + | chr5_4:10087434-10087453 | None:intergenic | 45.0% | |
| ! | TTTGGGGTGCAAACCTAGTT+GGG | - | chr5_4:10087440-10087459 | Msa0836610:intron | 45.0% |
| GTGCAAACCTAGTTGGGATT+TGG | - | chr5_4:10087446-10087465 | Msa0836610:intron | 45.0% | |
| !!! | TAGTAGTTTTAGGCGTGTCC+AGG | - | chr5_4:10087768-10087787 | Msa0836610:CDS | 45.0% |
| TGTCCAGGAAAAGTCTGAAG+AGG | - | chr5_4:10087783-10087802 | Msa0836610:intron | 45.0% | |
| ! | CTTCCTCTTCAGACTTTTCC+TGG | + | chr5_4:10087789-10087808 | None:intergenic | 45.0% |
| GAAACTAATCCCTGGATGTC+AGG | + | chr5_4:10088028-10088047 | None:intergenic | 45.0% | |
| AATGGTAACAGTTACCGACG+AGG | - | chr5_4:10088075-10088094 | Msa0836610:CDS | 45.0% | |
| AAATCTAGAGATGGAGGCCA+AGG | - | chr5_4:10088114-10088133 | Msa0836610:CDS | 45.0% | |
| TCCATTTGCATCAGACAGGT+TGG | - | chr5_4:10088144-10088163 | Msa0836610:CDS | 45.0% | |
| CCATTTGCATCAGACAGGTT+GGG | - | chr5_4:10088145-10088164 | Msa0836610:CDS | 45.0% | |
| GTCGCGTTAACTCAATTCTG+AGG | + | chr5_4:10088453-10088472 | None:intergenic | 45.0% | |
| CATTCACCTCATCAGTCTCT+TGG | + | chr5_4:10088781-10088800 | None:intergenic | 45.0% | |
| GATTCTTGCATGGTCTGAAC+TGG | - | chr5_4:10088984-10089003 | Msa0836610:CDS | 45.0% | |
| TAAGATCCTTTGGTTGCAGC+AGG | + | chr5_4:10089148-10089167 | None:intergenic | 45.0% | |
| !! | CAGGTTGGGTTTTCATACGA+CGG | - | chr5_4:10089172-10089191 | Msa0836610:intron | 45.0% |
| ! | GGGTTTTCATACGACGGAAA+TGG | - | chr5_4:10089178-10089197 | Msa0836610:intron | 45.0% |
| ! | ATGGGGTCAAAAGGTATGGT+TGG | - | chr5_4:10089320-10089339 | Msa0836610:intron | 45.0% |
| GGTGATCCTGCAATTGTAAG+TGG | - | chr5_4:10089403-10089422 | Msa0836610:intron | 45.0% | |
| GTAGAGGAAACTGAGTCGTA+AGG | - | chr5_4:10089518-10089537 | Msa0836610:intron | 45.0% | |
| GAGTCGTAAGGAAAGAAGGA+AGG | - | chr5_4:10089530-10089549 | Msa0836610:intron | 45.0% | |
| ATTGTGCTCCCACTGACAAA+TGG | - | chr5_4:10089683-10089702 | Msa0836610:intron | 45.0% | |
| TCCCACTGACAAATGGATAG+CGG | - | chr5_4:10089690-10089709 | Msa0836610:intron | 45.0% | |
| TCCGCTATCCATTTGTCAGT+GGG | + | chr5_4:10089694-10089713 | None:intergenic | 45.0% | |
| ATCCGCTATCCATTTGTCAG+TGG | + | chr5_4:10089695-10089714 | None:intergenic | 45.0% | |
| GGATAACGCATATGTGCTCA+AGG | + | chr5_4:10089829-10089848 | None:intergenic | 45.0% | |
| AATAACGCCTTGCATAGGAC+GGG | + | chr5_4:10089942-10089961 | None:intergenic | 45.0% | |
| GAATAACGCCTTGCATAGGA+CGG | + | chr5_4:10089943-10089962 | None:intergenic | 45.0% | |
| ! | CCTATGCAAGGCGTTATTCA+CGG | - | chr5_4:10089944-10089963 | Msa0836610:intron | 45.0% |
| ATAACTGAATTTGGGGGCTC+TGG | - | chr5_4:10090024-10090043 | Msa0836610:CDS | 45.0% | |
| GGGAACATTGAGCTCCAAAT+AGG | + | chr5_4:10090288-10090307 | None:intergenic | 45.0% | |
| GATGACCTGCAATACAGTAG+AGG | + | chr5_4:10090374-10090393 | None:intergenic | 45.0% | |
| CTGTATTGCAGGTCATCATC+TGG | - | chr5_4:10090377-10090396 | Msa0836610:CDS | 45.0% | |
| ! | TGGGTGATGGTATACCTTAC+GGG | + | chr5_4:10090479-10090498 | None:intergenic | 45.0% |
| ! | ATTTGCACGAGCTTAGCTCT+GGG | + | chr5_4:10090694-10090713 | None:intergenic | 45.0% |
| GGCAGAGGAGACAATTTATC+GGG | + | chr5_4:10090774-10090793 | None:intergenic | 45.0% | |
| TGAGTATCTGACATTGGCAG+AGG | + | chr5_4:10090789-10090808 | None:intergenic | 45.0% | |
| GCAAAAGAATCAACCAGCTG+TGG | + | chr5_4:10090936-10090955 | None:intergenic | 45.0% | |
| AGAATACTGAGCCCTGCATT+TGG | + | chr5_4:10090998-10091017 | None:intergenic | 45.0% | |
| !! | TTAAAGGCAAGTGGTTCTGG+AGG | - | chr5_4:10091282-10091301 | Msa0836610:intron | 45.0% |
| !! | TAAAGGCAAGTGGTTCTGGA+GGG | - | chr5_4:10091283-10091302 | Msa0836610:intron | 45.0% |
| GGCTCTTAAAACCTCAACCA+GGG | - | chr5_4:10091304-10091323 | Msa0836610:intron | 45.0% | |
| GCTCTTAAAACCTCAACCAG+GGG | - | chr5_4:10091305-10091324 | Msa0836610:intron | 45.0% | |
| ! | TCTTTCTTTTCCCCTGGTTG+AGG | + | chr5_4:10091318-10091337 | None:intergenic | 45.0% |
| ! | GGTGTTTCTTTCTTTTCCCC+TGG | + | chr5_4:10091324-10091343 | None:intergenic | 45.0% |
| CACCCCAAGAGAGACTTAAA+AGG | - | chr5_4:10091340-10091359 | Msa0836610:intron | 45.0% | |
| ! | TCGCTCCTGTTCTCTTTTCT+TGG | + | chr5_4:10091507-10091526 | None:intergenic | 45.0% |
| GTAGAAGTCCAAGTAGAAGC+AGG | - | chr5_4:10091823-10091842 | Msa0836610:intron | 45.0% | |
| AGAAGTCCAAGTAGAAGCAG+GGG | - | chr5_4:10091825-10091844 | Msa0836610:intron | 45.0% | |
| ! | TTTCTTTTCCTGTGCCTCAG+AGG | - | chr5_4:10091985-10092004 | Msa0836610:CDS | 45.0% |
| TGATGAGGAGTAAACCTCTG+AGG | + | chr5_4:10092002-10092021 | None:intergenic | 45.0% | |
| TCAGGCTAAGAAACCGTTCA+AGG | - | chr5_4:10092059-10092078 | Msa0836610:five_prime_UTR | 45.0% | |
| ATTGCTCCCAAGTGGTTAGA+AGG | - | chr5_4:10092142-10092161 | Msa0836610:five_prime_UTR | 45.0% | |
| !!! | ATTATTATGTTTTTTTTTAA+AGG | + | chr5_4:10090871-10090890 | None:intergenic | 5.0% |
| AGGAAGGAAGATGTGGCATG+AGG | - | chr5_4:10086139-10086158 | Msa0836610:intron | 50.0% | |
| AGATGTGGCATGAGGCAAGA+AGG | - | chr5_4:10086147-10086166 | Msa0836610:intron | 50.0% | |
| CAAGCCACCGAAGATCAACA+AGG | - | chr5_4:10086320-10086339 | Msa0836610:CDS | 50.0% | |
| TCCCACTAAAAAGCCGGACA+AGG | + | chr5_4:10087319-10087338 | None:intergenic | 50.0% | |
| TTCCTCCGCCCTTTCTCTTT+GGG | - | chr5_4:10087423-10087442 | Msa0836610:intron | 50.0% | |
| GGTTTGCACCCCAAAGAGAA+AGG | + | chr5_4:10087435-10087454 | None:intergenic | 50.0% | |
| !! | CTTTGGGGTGCAAACCTAGT+TGG | - | chr5_4:10087439-10087458 | Msa0836610:intron | 50.0% |
| TTCCTCAGGATACCCTGGAA+TGG | - | chr5_4:10087583-10087602 | Msa0836610:intron | 50.0% | |
| TCCTCAGGATACCCTGGAAT+GGG | - | chr5_4:10087584-10087603 | Msa0836610:intron | 50.0% | |
| CACGCCCATCAAATCTGCAA+AGG | + | chr5_4:10087726-10087745 | None:intergenic | 50.0% | |
| CTAATCCCTGGATGTCAGGT+TGG | + | chr5_4:10088024-10088043 | None:intergenic | 50.0% | |
| ! | ATGTTGCAAAGCGTCCTCGT+CGG | + | chr5_4:10088092-10088111 | None:intergenic | 50.0% |
| CTGCTCCATTTGCATCAGAC+AGG | - | chr5_4:10088140-10088159 | Msa0836610:CDS | 50.0% | |
| CCCAACCTGTCTGATGCAAA+TGG | + | chr5_4:10088148-10088167 | None:intergenic | 50.0% | |
| GGAGTTCCCCTTGTTAGAGT+TGG | + | chr5_4:10088850-10088869 | None:intergenic | 50.0% | |
| TGAGGAAGACGAAGATGACG+AGG | - | chr5_4:10089234-10089253 | Msa0836610:intron | 50.0% | |
| CGAAGATGACGAGGATGATG+AGG | - | chr5_4:10089243-10089262 | Msa0836610:intron | 50.0% | |
| AGAGAGAGCGAGAAGCTACA+CGG | - | chr5_4:10089571-10089590 | Msa0836610:intron | 50.0% | |
| TGATGTAGCACACGAGTTCC+AGG | + | chr5_4:10089600-10089619 | None:intergenic | 50.0% | |
| TGGAACTCGTGTGCTACATC+AGG | - | chr5_4:10089599-10089618 | Msa0836610:intron | 50.0% | |
| ATAACGCCTTGCATAGGACG+GGG | + | chr5_4:10089941-10089960 | None:intergenic | 50.0% | |
| CCGTGAATAACGCCTTGCAT+AGG | + | chr5_4:10089947-10089966 | None:intergenic | 50.0% | |
| CTGGAGAAGCAGATGGAACT+AGG | - | chr5_4:10090043-10090062 | Msa0836610:CDS | 50.0% | |
| GATGGAGGAGGCTTCCTATT+TGG | - | chr5_4:10090271-10090290 | Msa0836610:intron | 50.0% | |
| TTGCATGTCGATCCTGCTTC+TGG | - | chr5_4:10090416-10090435 | Msa0836610:CDS | 50.0% | |
| TCAACGGATACACCAGAAGC+AGG | + | chr5_4:10090431-10090450 | None:intergenic | 50.0% | |
| AAGTCTTGAAGCCACCCGTA+AGG | - | chr5_4:10090462-10090481 | Msa0836610:intron | 50.0% | |
| GTGATGGTATACCTTACGGG+TGG | + | chr5_4:10090476-10090495 | None:intergenic | 50.0% | |
| !! | GCTCTGGGGATTGATGTGTA+CGG | + | chr5_4:10090679-10090698 | None:intergenic | 50.0% |
| !! | TTTGCACGAGCTTAGCTCTG+GGG | + | chr5_4:10090693-10090712 | None:intergenic | 50.0% |
| CATTTGCACGAGCTTAGCTC+TGG | + | chr5_4:10090695-10090714 | None:intergenic | 50.0% | |
| CACGAGGAGATGTGGGATAA+TGG | + | chr5_4:10090960-10090979 | None:intergenic | 50.0% | |
| CTGTGTACACGAGGAGATGT+GGG | + | chr5_4:10090967-10090986 | None:intergenic | 50.0% | |
| ACAGCACACTCTCCAAATGC+AGG | - | chr5_4:10090983-10091002 | Msa0836610:intron | 50.0% | |
| CAGCACACTCTCCAAATGCA+GGG | - | chr5_4:10090984-10091003 | Msa0836610:intron | 50.0% | |
| ! | CTTTTCCACAGCACACCTTC+AGG | - | chr5_4:10091243-10091262 | Msa0836610:intron | 50.0% |
| ! | TTTGCTAGTGCTGAGCCTGA+AGG | + | chr5_4:10091261-10091280 | None:intergenic | 50.0% |
| GGGCTCTTAAAACCTCAACC+AGG | - | chr5_4:10091303-10091322 | Msa0836610:intron | 50.0% | |
| AAAGAGAACAGGAGCGACAG+AGG | - | chr5_4:10091510-10091529 | Msa0836610:intron | 50.0% | |
| AACGACTGTAACTCCTGCTG+CGG | + | chr5_4:10091586-10091605 | None:intergenic | 50.0% | |
| !!! | GCCCTTGCTTTGTTTTCCTC+TGG | - | chr5_4:10091759-10091778 | Msa0836610:intron | 50.0% |
| ! | TAAGGAGAGCGTGAACGATG+CGG | + | chr5_4:10091936-10091955 | None:intergenic | 50.0% |
| CTCCTTATTCTCGTTCTCCC+AGG | - | chr5_4:10091949-10091968 | Msa0836610:CDS | 50.0% | |
| CACCTGGGAGAACGAGAATA+AGG | + | chr5_4:10091954-10091973 | None:intergenic | 50.0% | |
| GTGGCATGAGGCAAGAAGGT+CGG | - | chr5_4:10086151-10086170 | Msa0836610:intron | 55.0% | |
| GGCAAGAAGGTCGGAGAAGA+AGG | - | chr5_4:10086160-10086179 | Msa0836610:intron | 55.0% | |
| GAGCAGCGTCCATCATGTCA+TGG | + | chr5_4:10086187-10086206 | None:intergenic | 55.0% | |
| ! | GATCACCGCGACGTTTTGCA+AGG | + | chr5_4:10086238-10086257 | None:intergenic | 55.0% |
| CAAACTCTGCTGCCATACCC+TGG | - | chr5_4:10087175-10087194 | Msa0836610:intron | 55.0% | |
| GTTCCTCCGCCCTTTCTCTT+TGG | - | chr5_4:10087422-10087441 | Msa0836610:intron | 55.0% | |
| TCCTCCGCCCTTTCTCTTTG+GGG | - | chr5_4:10087424-10087443 | Msa0836610:intron | 55.0% | |
| TGCACCCCAAAGAGAAAGGG+CGG | + | chr5_4:10087431-10087450 | None:intergenic | 55.0% | |
| ! | TCCCATTCCAGGGTATCCTG+AGG | + | chr5_4:10087588-10087607 | None:intergenic | 55.0% |
| !! | AGCATCGGCGTAGAGGATGT+CGG | - | chr5_4:10087857-10087876 | Msa0836610:intron | 55.0% |
| ATCAGGCCAACCTGACATCC+AGG | - | chr5_4:10088015-10088034 | Msa0836610:intron | 55.0% | |
| TCAGGCCAACCTGACATCCA+GGG | - | chr5_4:10088016-10088035 | Msa0836610:intron | 55.0% | |
| TGCAAATGGAGCAGCAGCCT+TGG | + | chr5_4:10088134-10088153 | None:intergenic | 55.0% | |
| TCACAGCCTGCTGCAACCAA+AGG | - | chr5_4:10089139-10089158 | Msa0836610:intron | 55.0% | |
| CGAGAAGCTACACGGATACC+TGG | - | chr5_4:10089579-10089598 | Msa0836610:intron | 55.0% | |
| TGCTACATCAGGACCCCTAC+CGG | - | chr5_4:10089610-10089629 | Msa0836610:intron | 55.0% | |
| GCAGGTCAAGGTCCAGATCA+CGG | - | chr5_4:10089908-10089927 | Msa0836610:intron | 55.0% | |
| GCAGATGGAACTAGGCGTGA+AGG | - | chr5_4:10090051-10090070 | Msa0836610:CDS | 55.0% | |
| ACTCGAGATGTGGGAGATCG+CGG | + | chr5_4:10090087-10090106 | None:intergenic | 55.0% | |
| CATTAAACCGGTCGGAGCAC+TGG | - | chr5_4:10090112-10090131 | Msa0836610:intron | 55.0% | |
| TAAAGGTCCAGTGCTCCGAC+CGG | + | chr5_4:10090122-10090141 | None:intergenic | 55.0% | |
| TTGTCAGGGTAGCTGCCAAG+AGG | - | chr5_4:10090246-10090265 | Msa0836610:intron | 55.0% | |
| GGTAGCTGCCAAGAGGAAGA+TGG | - | chr5_4:10090253-10090272 | Msa0836610:intron | 55.0% | |
| AGCTGCCAAGAGGAAGATGG+AGG | - | chr5_4:10090256-10090275 | Msa0836610:intron | 55.0% | |
| TGCCAAGAGGAAGATGGAGG+AGG | - | chr5_4:10090259-10090278 | Msa0836610:intron | 55.0% | |
| AGCCTCCTCCATCTTCCTCT+TGG | + | chr5_4:10090264-10090283 | None:intergenic | 55.0% | |
| TGTGGACATGTCAGCCAAGG+GGG | + | chr5_4:10090918-10090937 | None:intergenic | 55.0% | |
| CTGTGGACATGTCAGCCAAG+GGG | + | chr5_4:10090919-10090938 | None:intergenic | 55.0% | |
| GCTGTGGACATGTCAGCCAA+GGG | + | chr5_4:10090920-10090939 | None:intergenic | 55.0% | |
| AGCTGTGGACATGTCAGCCA+AGG | + | chr5_4:10090921-10090940 | None:intergenic | 55.0% | |
| TTGGCTGACATGTCCACAGC+TGG | - | chr5_4:10090920-10090939 | Msa0836610:intron | 55.0% | |
| GCTGTGTACACGAGGAGATG+TGG | + | chr5_4:10090968-10090987 | None:intergenic | 55.0% | |
| ! | GAGAGTGTGCTGTGTACACG+AGG | + | chr5_4:10090976-10090995 | None:intergenic | 55.0% |
| GTTACAGTCGTTCCCCACCA+AGG | - | chr5_4:10091594-10091613 | Msa0836610:intron | 55.0% | |
| CTGGAACCCCTGCTTCTACT+TGG | + | chr5_4:10091834-10091853 | None:intergenic | 55.0% | |
| CAAGTTCTCGCTCCCGTTCT+CGG | - | chr5_4:10091865-10091884 | Msa0836610:CDS | 55.0% | |
| TGCGATTAGGGGACCGAGAA+CGG | + | chr5_4:10091881-10091900 | None:intergenic | 55.0% | |
| ACCGAGAACGGGTGCGATTA+GGG | + | chr5_4:10091893-10091912 | None:intergenic | 55.0% | |
| !! | GGAGTAAACCTCTGAGGCAC+AGG | + | chr5_4:10091996-10092015 | None:intergenic | 55.0% |
| GTATGCATGAAAGGCCAGCG+AGG | - | chr5_4:10092097-10092116 | Msa0836610:intron | 55.0% | |
| AGATTGCACACAAGCCTCGC+TGG | + | chr5_4:10092114-10092133 | None:intergenic | 55.0% | |
| ACTCTGCTGCCATACCCTGG+AGG | - | chr5_4:10087178-10087197 | Msa0836610:intron | 60.0% | |
| ACCCCAAAGAGAAAGGGCGG+AGG | + | chr5_4:10087428-10087447 | None:intergenic | 60.0% | |
| GGAGTCGAGTGTTACCGCTG+AGG | + | chr5_4:10088654-10088673 | None:intergenic | 60.0% | |
| CCTTGCATAGGACGGGGAGT+AGG | + | chr5_4:10089935-10089954 | None:intergenic | 60.0% | |
| CCTACTCCCCGTCCTATGCA+AGG | - | chr5_4:10089932-10089951 | Msa0836610:intron | 60.0% | |
| GTGGACATGTCAGCCAAGGG+GGG | + | chr5_4:10090917-10090936 | None:intergenic | 60.0% | |
| ! | CTGAGCCTGAAGGTGTGCTG+TGG | + | chr5_4:10091251-10091270 | None:intergenic | 60.0% |
| GCGATTAGGGGACCGAGAAC+GGG | + | chr5_4:10091880-10091899 | None:intergenic | 60.0% | |
| CCGAGAACGGGTGCGATTAG+GGG | + | chr5_4:10091892-10091911 | None:intergenic | 60.0% | |
| CCCCTAATCGCACCCGTTCT+CGG | - | chr5_4:10091889-10091908 | Msa0836610:CDS | 60.0% | |
| GACCGAGAACGGGTGCGATT+AGG | + | chr5_4:10091894-10091913 | None:intergenic | 60.0% | |
| TGCGAGAAGGGGACCGAGAA+CGG | + | chr5_4:10091905-10091924 | None:intergenic | 60.0% | |
| CGGAGAACGAGTGCGAGAAG+GGG | + | chr5_4:10091916-10091935 | None:intergenic | 60.0% | |
| GCGGAGAACGAGTGCGAGAA+GGG | + | chr5_4:10091917-10091936 | None:intergenic | 60.0% | |
| TGCGGAGAACGAGTGCGAGA+AGG | + | chr5_4:10091918-10091937 | None:intergenic | 60.0% | |
| CGGGGAGTAGGACCGTGATC+TGG | + | chr5_4:10089923-10089942 | None:intergenic | 65.0% | |
| !! | GGGGGCTCTGGAGAAGCAGA+TGG | - | chr5_4:10090036-10090055 | Msa0836610:CDS | 65.0% |
| CGAGATGTGGGAGATCGCGG+TGG | + | chr5_4:10090084-10090103 | None:intergenic | 65.0% | |
| CCAAGGGGGGTCAGCTGGTA+AGG | + | chr5_4:10090904-10090923 | None:intergenic | 65.0% | |
| CCTTACCAGCTGACCCCCCT+TGG | - | chr5_4:10090901-10090920 | Msa0836610:intron | 65.0% | |
| GCGAGAAGGGGACCGAGAAC+GGG | + | chr5_4:10091904-10091923 | None:intergenic | 65.0% | |
| GTCAGCCAAGGGGGGTCAGC+TGG | + | chr5_4:10090909-10090928 | None:intergenic | 70.0% | |
| ! | ATAGGCGTCGCAGCCGCAGC+AGG | - | chr5_4:10091570-10091589 | Msa0836610:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 10086002 | 10092182 | 10086002 | ID=Msa0836610;Name=Msa0836610 |
| chr5_4 | mRNA | 10086002 | 10092182 | 10086002 | ID=Msa0836610-mRNA-1;Parent=Msa0836610;Name=Msa0836610-mRNA-1;_AED=0.19;_eAED=0.19;_QI=123|0.92|0.92|1|0.92|0.85|14|0|593 |
| chr5_4 | exon | 10086002 | 10086137 | 10086002 | ID=Msa0836610-mRNA-1:exon:4489;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10086214 | 10086375 | 10086214 | ID=Msa0836610-mRNA-1:exon:4488;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10086569 | 10086707 | 10086569 | ID=Msa0836610-mRNA-1:exon:4487;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10086794 | 10086930 | 10086794 | ID=Msa0836610-mRNA-1:exon:4486;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10087701 | 10087796 | 10087701 | ID=Msa0836610-mRNA-1:exon:4485;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10088063 | 10088272 | 10088063 | ID=Msa0836610-mRNA-1:exon:4484;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10088375 | 10088422 | 10088375 | ID=Msa0836610-mRNA-1:exon:4483;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10088553 | 10088662 | 10088553 | ID=Msa0836610-mRNA-1:exon:4482;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10088767 | 10089055 | 10088767 | ID=Msa0836610-mRNA-1:exon:4481;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10090023 | 10090098 | 10090023 | ID=Msa0836610-mRNA-1:exon:4480;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10090310 | 10090452 | 10090310 | ID=Msa0836610-mRNA-1:exon:4479;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10090555 | 10090593 | 10090555 | ID=Msa0836610-mRNA-1:exon:4478;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10091839 | 10092092 | 10091839 | ID=Msa0836610-mRNA-1:exon:4477;Parent=Msa0836610-mRNA-1 |
| chr5_4 | exon | 10092117 | 10092182 | 10092117 | ID=Msa0836610-mRNA-1:exon:4476;Parent=Msa0836610-mRNA-1 |
| chr5_4 | five_prime_UTR | 10092117 | 10092182 | 10092117 | ID=Msa0836610-mRNA-1:five_prime_utr;Parent=Msa0836610-mRNA-1 |
| chr5_4 | five_prime_UTR | 10092036 | 10092092 | 10092036 | ID=Msa0836610-mRNA-1:five_prime_utr;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10091839 | 10092035 | 10091839 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10090555 | 10090593 | 10090555 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10090310 | 10090452 | 10090310 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10090023 | 10090098 | 10090023 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10088767 | 10089055 | 10088767 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10088553 | 10088662 | 10088553 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10088375 | 10088422 | 10088375 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10088063 | 10088272 | 10088063 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10087701 | 10087796 | 10087701 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10086794 | 10086930 | 10086794 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10086569 | 10086707 | 10086569 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10086214 | 10086375 | 10086214 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| chr5_4 | CDS | 10086002 | 10086137 | 10086002 | ID=Msa0836610-mRNA-1:cds;Parent=Msa0836610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
