AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0802490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802490 MtrunA17_Chr5g0410081 98.570 839 12 0 1 839 1 839 0.0 1724
Msa0802490 MtrunA17_Chr6g0479291 62.583 751 252 12 101 839 198 931 0.0 971
Msa0802490 MtrunA17_Chr5g0402991 52.475 707 309 11 125 815 192 887 0.0 721
Msa0802490 MtrunA17_Chr8g0374061 54.021 659 277 9 171 815 118 764 0.0 698
Msa0802490 MtrunA17_Chr1g0162561 48.851 653 311 8 171 813 209 848 0.0 608
Msa0802490 MtrunA17_Chr1g0151141 33.333 396 208 16 422 810 36 382 3.50e-50 181
Msa0802490 MtrunA17_Chr3g0136391 27.179 195 115 7 543 735 24 193 4.49e-14 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802490 AT1G31930.5 67.749 862 234 10 4 839 5 848 0.0 1148
Msa0802490 AT1G31930.2 67.749 862 234 10 4 839 5 848 0.0 1148
Msa0802490 AT1G31930.3 67.749 862 234 10 4 839 5 848 0.0 1148
Msa0802490 AT1G31930.6 67.749 862 234 10 4 839 5 848 0.0 1148
Msa0802490 AT1G31930.1 67.749 862 234 10 4 839 5 848 0.0 1148
Msa0802490 AT1G31930.4 67.749 862 234 10 4 839 5 848 0.0 1148
Msa0802490 AT2G23460.1 50.338 739 334 12 96 815 144 868 0.0 704
Msa0802490 AT4G34390.1 45.507 690 327 16 161 833 204 861 0.0 552
Msa0802490 AT4G34390.2 43.043 690 305 16 161 833 204 822 2.18e-166 503
Msa0802490 AT2G26300.2 31.159 414 218 14 408 810 16 373 1.30e-51 186
Msa0802490 AT2G26300.1 31.159 414 218 14 408 810 16 373 1.30e-51 186

Find 238 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCAGAAGCTTCTTCTTCT+TGG 0.179208 5_3:-16912410 Msa0802490:CDS
TGCTTTGAATCATCTTGTTT+TGG 0.199485 5_3:+16910445 None:intergenic
GAATCCAAGCGTCTGAAATT+AGG 0.205731 5_3:-16913627 Msa0802490:CDS
AGAAAATAAGAGTTTGTTAT+AGG 0.213096 5_3:-16913788 Msa0802490:CDS
TTGTTAAGAACTAGTATTAA+AGG 0.230147 5_3:+16910375 None:intergenic
GTGTAGTAGTAGTAGTGATA+TGG 0.237053 5_3:+16915302 None:intergenic
CAACCTCTTAATAGCAAAAT+AGG 0.247529 5_3:+16909985 None:intergenic
ACATAAAAGAGGTTCTTAAA+TGG 0.262325 5_3:-16910122 Msa0802490:CDS
TCGACAGCTTCGGAATATTT+AGG 0.266925 5_3:-16914188 Msa0802490:CDS
GGGAAATGGTTTGGCTTTCA+TGG 0.284339 5_3:-16910806 Msa0802490:CDS
AGTTCAAACTTGAATTTCTC+TGG 0.305993 5_3:-16912976 Msa0802490:CDS
CTGTATAAGCTTCGAACTTT+GGG 0.314678 5_3:+16910761 None:intergenic
CTAAACCCGGATCTTTCTTC+TGG 0.316664 5_3:-16914002 Msa0802490:CDS
AGGTTCTCCTGCTCACATTA+TGG 0.317177 5_3:-16912000 Msa0802490:CDS
GTCCACGTGATACTCACTTT+TGG 0.317550 5_3:-16912698 Msa0802490:CDS
TTGCCGATGTCACGTATTTC+CGG 0.319193 5_3:-16914092 Msa0802490:CDS
CTTCTTCTTCTTGGAATTCA+AGG 0.319947 5_3:-16912401 Msa0802490:CDS
CTTCTTGGAATTCAAGGGTC+TGG 0.324531 5_3:-16912395 Msa0802490:CDS
ACGACAAAGAATCTGGTCTA+TGG 0.324545 5_3:-16913404 Msa0802490:CDS
GCCTTCAGCTTCACCGGCTT+CGG 0.330535 5_3:-16913976 Msa0802490:CDS
AGAATATAAGAGGAAACATT+TGG 0.337123 5_3:-16912638 Msa0802490:CDS
AGACGCTTGGATTCGTCAAT+AGG 0.342855 5_3:+16913636 None:intergenic
CAATATGCTTACTTGGTCAT+TGG 0.347638 5_3:+16910715 None:intergenic
ATCATAATAGAGGAGATAAT+TGG 0.353939 5_3:-16914280 Msa0802490:CDS
GTTACACATTTGCGCCCTTC+AGG 0.359236 5_3:+16913672 None:intergenic
GAATCTGATCTTTAAATCTA+AGG 0.368350 5_3:+16915127 None:intergenic
TCTGTATAAGCTTCGAACTT+TGG 0.372490 5_3:+16910760 None:intergenic
TGTTGGTGATTACAAAGATA+TGG 0.384455 5_3:-16914303 Msa0802490:exon
CAGCTGTGTGCTCAGGGCGA+TGG 0.385325 5_3:-16913703 Msa0802490:CDS
ACCCACTACACATTTGATAA+AGG 0.389361 5_3:+16915198 None:intergenic
ATTATTAACATCTTAACAAT+GGG 0.389953 5_3:-16915339 Msa0802490:five_prime_UTR
ATAACTGATCGTAGTCGCTT+AGG 0.393112 5_3:+16910505 None:intergenic
AATCCAAGCGTCTGAAATTA+GGG 0.394591 5_3:-16913626 Msa0802490:CDS
ACATCTAGAGGCTCAACTTT+CGG 0.399792 5_3:+16914143 None:intergenic
AAGAAGTACTCCGCAACATC+TGG 0.402272 5_3:+16911418 None:intergenic
TTTGTTATAGGTGTGGTAAA+GGG 0.404012 5_3:-16913776 Msa0802490:CDS
TCACGTATTTCCGGTGTGAC+GGG 0.404061 5_3:-16914083 Msa0802490:CDS
AGCTGAAGCCTGGTAGATAT+TGG 0.404152 5_3:-16913428 Msa0802490:CDS
GAGAAAGATGAAAATTACTA+TGG 0.405466 5_3:-16910093 Msa0802490:CDS
AATCATAGTCCAAGGGTGTC+TGG 0.406251 5_3:-16914053 Msa0802490:CDS
GGTTACTCAGGGAAATGGTT+TGG 0.408020 5_3:-16910815 Msa0802490:CDS
GCATATTCACGTGTCGCTGC+AGG 0.408474 5_3:+16911517 None:intergenic
ATCTCAGGTACCAACTCATA+AGG 0.412874 5_3:-16910608 Msa0802490:intron
ATTGCAGCAGCTGTGTGCTC+AGG 0.424032 5_3:-16913710 Msa0802490:CDS
TTCCTGTGATGGATGCATAA+AGG 0.425207 5_3:+16910208 None:intergenic
TTTCCCTAATTTCAGACGCT+TGG 0.425388 5_3:+16913623 None:intergenic
AGGAGATAATTGGAGGGAAG+TGG 0.428042 5_3:-16914270 Msa0802490:CDS
TTCACAACTCCAACGTACTC+TGG 0.429673 5_3:+16913825 None:intergenic
CTTCAGCTTGCGTGGAGGTA+AGG 0.430576 5_3:+16913443 None:intergenic
CTCCTGGACATTATAGCCAC+TGG 0.433165 5_3:-16911559 Msa0802490:CDS
CATAAAAGAGGTTCTTAAAT+GGG 0.433650 5_3:-16910121 Msa0802490:CDS
TTGTTGTCGTGTGCGCGAAC+GGG 0.436899 5_3:+16910282 None:intergenic
GAAGGTCAAAAGAATATAAG+AGG 0.437475 5_3:-16912648 Msa0802490:CDS
TCTGTGGAAGCACTGTTCAT+TGG 0.437812 5_3:-16909835 Msa0802490:three_prime_UTR
TATTGGTACGACAAAGAATC+TGG 0.439746 5_3:-16913411 Msa0802490:CDS
AGCTGTGTGCTCAGGGCGAT+GGG 0.439917 5_3:-16913702 Msa0802490:CDS
AGTAAGTCTTCCATCTCATC+AGG 0.442958 5_3:+16913474 None:intergenic
CTTCCATCTCATCAGGTTTG+AGG 0.443955 5_3:+16913481 None:intergenic
GAATATAAGAGGAAACATTT+GGG 0.444612 5_3:-16912637 Msa0802490:CDS
GTTCCGCTGCCATTGCTGTC+TGG 0.451485 5_3:+16910474 None:intergenic
TAACAAATACGACGTCTTCG+AGG 0.451533 5_3:-16910358 Msa0802490:CDS
TTGAAGGTCACTTGTATCGC+TGG 0.452762 5_3:+16911466 None:intergenic
GAAGGGGTTACTCAGGGAAA+TGG 0.456344 5_3:-16910820 Msa0802490:CDS
GAGAGTGTACCTTATAGAAA+AGG 0.456964 5_3:+16915102 None:intergenic
GTTTGTTATAGGTGTGGTAA+AGG 0.458659 5_3:-16913777 Msa0802490:CDS
ATCCCGACTGTTGAGTCCTC+TGG 0.461629 5_3:-16913586 Msa0802490:CDS
ACGGTATTAAAAGTTACAAC+AGG 0.462099 5_3:+16913897 None:intergenic
GGTGGTGGAGGTTGTGAAGC+CGG 0.462707 5_3:-16913853 Msa0802490:CDS
TTTGAACTAATGATTCTGTC+AGG 0.463062 5_3:+16912991 None:intergenic
TTCGGTACTTCATAAGAAAC+CGG 0.463768 5_3:+16914161 None:intergenic
TAACTGATCGTAGTCGCTTA+GGG 0.465956 5_3:+16910506 None:intergenic
AACTCGAATTGAGGGTACTC+AGG 0.466428 5_3:-16912888 Msa0802490:CDS
GCAACCTTCGCTCATGCCCT+TGG 0.468837 5_3:+16910578 None:intergenic
GTTGTTGTCGTGTGCGCGAA+CGG 0.469425 5_3:+16910281 None:intergenic
TGGCATTCACCCTTATGAGT+TGG 0.476657 5_3:+16910598 None:intergenic
TCTTGATTACTCGACAGCTT+CGG 0.477356 5_3:-16914198 Msa0802490:CDS
GTTCAAACTTGAATTTCTCT+GGG 0.480058 5_3:-16912975 Msa0802490:CDS
TCTGAACTTCCAGACACCCT+TGG 0.482123 5_3:+16914044 None:intergenic
TCCTTTATCAAATGTGTAGT+GGG 0.486978 5_3:-16915199 Msa0802490:five_prime_UTR
CGACAAAGAATCTGGTCTAT+GGG 0.487042 5_3:-16913403 Msa0802490:CDS
GGCGAACCAGAAGAAAGATC+CGG 0.487194 5_3:+16913996 None:intergenic
GACACCCTTGGACTATGATT+AGG 0.488171 5_3:+16914056 None:intergenic
GATGAGATGGAAGACTTACT+TGG 0.489124 5_3:-16913471 Msa0802490:CDS
TTCTCTCTACCCTATCCTCA+TGG 0.490716 5_3:-16912503 Msa0802490:CDS
GACTCAGAGGAAAGAGGTGG+TGG 0.491543 5_3:-16913868 Msa0802490:CDS
AAGCTTGATGTGCTAGTGAT+TGG 0.491832 5_3:+16910259 None:intergenic
TCCTGGACATTATAGCCACT+GGG 0.495286 5_3:-16911558 Msa0802490:CDS
GAGGCTGTTTCTAGAATGAA+TGG 0.497615 5_3:-16912026 Msa0802490:CDS
GTCACGTATTTCCGGTGTGA+CGG 0.499022 5_3:-16914084 Msa0802490:CDS
AACACTGAGGTTTACATCAA+TGG 0.499687 5_3:-16912925 Msa0802490:CDS
TTCGGAATATTTAGGTCCAC+CGG 0.500662 5_3:-16914180 Msa0802490:CDS
GAACCATTCACAAGCGTTGA+GGG 0.500930 5_3:+16910317 None:intergenic
AAAGATATGGATCATAATAG+AGG 0.501836 5_3:-16914290 Msa0802490:exon
TTGCGGAGTACTTCTTAAGC+CGG 0.502186 5_3:-16911411 Msa0802490:CDS
TTCCTTTATCAAATGTGTAG+TGG 0.502436 5_3:-16915200 Msa0802490:five_prime_UTR
TCAAGATTAGAAGCGTCATC+AGG 0.502867 5_3:+16914215 None:intergenic
ATCTGCATGTTTGCATTCTG+TGG 0.504877 5_3:-16909851 Msa0802490:three_prime_UTR
ATATGCAGAAGGGGTTACTC+AGG 0.507616 5_3:-16910827 Msa0802490:CDS
GAAAGCGGAGAAAGAATGTT+CGG 0.508911 5_3:-16913547 Msa0802490:CDS
CCGTTGACACTCAACTGCTC+TGG 0.510346 5_3:+16913510 None:intergenic
TGTAGTAGTAGTAGTGATAT+GGG 0.510744 5_3:+16915303 None:intergenic
GATTATTAACATCTTAACAA+TGG 0.512576 5_3:-16915340 Msa0802490:five_prime_UTR
TTCAGCTTGCGTGGAGGTAA+GGG 0.513690 5_3:+16913444 None:intergenic
TTCGAATGTTGCTTCTAAGC+CGG 0.514313 5_3:-16913943 Msa0802490:CDS
TTCTTCTTCTTGGAATTCAA+GGG 0.514846 5_3:-16912400 Msa0802490:CDS
GACCTTTATGCATCCATCAC+AGG 0.514967 5_3:-16910210 Msa0802490:CDS
ATGAGGCTGTCCATGAGGAT+AGG 0.516805 5_3:+16912493 None:intergenic
CCTGCTCACATTATGGAAGC+TGG 0.518201 5_3:-16911993 Msa0802490:intron
TCACTTCCTTCCAGATGTTG+CGG 0.521515 5_3:-16911428 Msa0802490:CDS
CGCAAATGTGTAACATGCAT+CGG 0.521554 5_3:-16913663 Msa0802490:CDS
TGGTTCGCCTTCAGCTTCAC+CGG 0.523608 5_3:-16913982 Msa0802490:CDS
TATCCCTCAACGCTTGTGAA+TGG 0.523776 5_3:-16910320 Msa0802490:CDS
ATATCTGTAATTGAATCCTC+AGG 0.524085 5_3:+16910066 None:intergenic
CCTCCACGCAAGCTGAAGCC+TGG 0.524656 5_3:-16913438 Msa0802490:CDS
TTAGCACTGATGCTAGTAAC+GGG 0.524938 5_3:-16912948 Msa0802490:CDS
GAAGGATTATGAACCGAAGC+CGG 0.527127 5_3:+16913963 None:intergenic
CTCTTCGCCTCATTAATCAC+CGG 0.527445 5_3:+16913924 None:intergenic
TGAAATTAGGGAAATATTCG+AGG 0.529424 5_3:-16913614 Msa0802490:CDS
TCTCAGGTACCAACTCATAA+GGG 0.529434 5_3:-16910607 Msa0802490:intron
CCCCAGTGGCTATAATGTCC+AGG 0.529739 5_3:+16911557 None:intergenic
GAAATACGTGACATCGGCAA+AGG 0.530158 5_3:+16914095 None:intergenic
GTCTGGAAGTTCAGAATCTG+TGG 0.530261 5_3:-16914036 Msa0802490:CDS
ATAGGTGTGGTAAAGGGAAG+TGG 0.530493 5_3:-16913770 Msa0802490:CDS
TTCCACACTTCTTCGACTAG+TGG 0.534470 5_3:+16911493 None:intergenic
AAATACGTGACATCGGCAAA+GGG 0.535014 5_3:+16914096 None:intergenic
CGACTATGAACCTTCTGAAA+GGG 0.535573 5_3:-16910857 Msa0802490:CDS
ATAATTTGCTTAACTTCCAG+AGG 0.535842 5_3:+16913570 None:intergenic
TGAGGCTGTCCATGAGGATA+GGG 0.536471 5_3:+16912494 None:intergenic
AATCTTTATTCAGGTAGCAA+TGG 0.537742 5_3:-16911649 Msa0802490:intron
TTGTTGCACAAGTTAGGGCA+AGG 0.539883 5_3:-16910176 Msa0802490:CDS
ACTATGGTAATAATTGGGAA+AGG 0.540417 5_3:-16909772 Msa0802490:three_prime_UTR
AGCATTCAAGTACATAAAAG+AGG 0.541232 5_3:-16910133 Msa0802490:CDS
CAAATTTACTGATCAAGAGC+TGG 0.541738 5_3:-16912129 Msa0802490:CDS
AGGATAGGGTAGAGAGAAGA+GGG 0.541964 5_3:+16912508 None:intergenic
TATAATGTCCAGGAGCCAAT+CGG 0.542069 5_3:+16911567 None:intergenic
GATTACAAAACTCGAATTGA+GGG 0.543174 5_3:-16912896 Msa0802490:CDS
TAGTGATATGGGTCCCACTT+AGG 0.544518 5_3:+16915314 None:intergenic
TCTCCTCAAACCTGATGAGA+TGG 0.546849 5_3:-16913484 Msa0802490:CDS
TATCCTCATGGACAGCCTCA+TGG 0.548421 5_3:-16912491 Msa0802490:CDS
AACTAGCACCATGTTTAAGC+AGG 0.548505 5_3:-16912372 Msa0802490:intron
CCAGCTTCCATAATGTGAGC+AGG 0.550063 5_3:+16911993 None:intergenic
AAACAAGATGATTCAAAGCA+AGG 0.551964 5_3:-16910442 Msa0802490:CDS
ATAATAGAGGAGATAATTGG+AGG 0.553110 5_3:-16914277 Msa0802490:CDS
TTGCAGCAGCTGTGTGCTCA+GGG 0.553376 5_3:-16913709 Msa0802490:CDS
TTGTCGTACCAATATCTACC+AGG 0.553776 5_3:+16913420 None:intergenic
GGAAATGAGAAAGAGAAAGA+TGG 0.554204 5_3:+16915219 None:intergenic
TTCTAAGCCGGTGATTAATG+AGG 0.555132 5_3:-16913931 Msa0802490:CDS
AAGAGGAAACATTTGGGAGA+AGG 0.555224 5_3:-16912631 Msa0802490:intron
CTACCAGGCTTCAGCTTGCG+TGG 0.558966 5_3:+16913435 None:intergenic
TGCGGAGTACTTCTTAAGCC+GGG 0.559400 5_3:-16911410 Msa0802490:intron
CCAGAGCAGTTGAGTGTCAA+CGG 0.559543 5_3:-16913510 Msa0802490:CDS
GGTCTCCTAATCATAGTCCA+AGG 0.562082 5_3:-16914061 Msa0802490:CDS
GTGAAGAAGATGCTTCCGCC+GGG 0.565713 5_3:-16914248 Msa0802490:CDS
TTGGTTGCAACTGAGCATCA+AGG 0.566584 5_3:+16910734 None:intergenic
CGATGGGATCAATGCCTGAA+GGG 0.567041 5_3:-16913686 Msa0802490:CDS
AAAGGAGTGTCTTTGAAACA+AGG 0.567459 5_3:+16910393 None:intergenic
GCTTGGATTCGTCAATAGGC+TGG 0.567856 5_3:+16913640 None:intergenic
ATAAGAGTTTGTTATAGGTG+TGG 0.569468 5_3:-16913783 Msa0802490:CDS
TAGGTGTGGTAAAGGGAAGT+GGG 0.572746 5_3:-16913769 Msa0802490:CDS
CTTCCAGAGGACTCAACAGT+CGG 0.574189 5_3:+16913583 None:intergenic
TCAGAGGAAAGAGGTGGTGG+AGG 0.574303 5_3:-16913865 Msa0802490:CDS
ACTCATAAGGGTGAATGCCA+AGG 0.574599 5_3:-16910595 Msa0802490:CDS
AGATTACAAAACTCGAATTG+AGG 0.575057 5_3:-16912897 Msa0802490:CDS
GGTGAAGAAGATGCTTCCGC+CGG 0.575635 5_3:-16914249 Msa0802490:CDS
GGTTTCTGTGTTACTAAACC+CGG 0.577540 5_3:-16914015 Msa0802490:CDS
CCTCTGAACTTCACATCTAG+AGG 0.577758 5_3:+16914131 None:intergenic
GCGAACCAGAAGAAAGATCC+GGG 0.578672 5_3:+16913997 None:intergenic
TTCCAGAGGACTCAACAGTC+GGG 0.579300 5_3:+16913584 None:intergenic
TGAACCATTCACAAGCGTTG+AGG 0.581430 5_3:+16910316 None:intergenic
TATAGTATGTCCCTTTCAGA+AGG 0.581848 5_3:+16910847 None:intergenic
TGTTGCACAAGTTAGGGCAA+GGG 0.583819 5_3:-16910175 Msa0802490:CDS
TAATAGAGGAGATAATTGGA+GGG 0.587246 5_3:-16914276 Msa0802490:CDS
TTAGAGAAGATGCACAACAT+AGG 0.587426 5_3:-16915381 None:intergenic
ACTCGAATTGAGGGTACTCA+GGG 0.588057 5_3:-16912887 Msa0802490:intron
GCGATGGGATCAATGCCTGA+AGG 0.590546 5_3:-16913687 Msa0802490:CDS
AATGAGAAAGAGAAAGATGG+TGG 0.590800 5_3:+16915222 None:intergenic
TTCAAGATATTTAGGAACTG+TGG 0.591645 5_3:+16912442 None:intergenic
AGAATCTGGTCTATGGGGAA+AGG 0.592126 5_3:-16913397 Msa0802490:intron
GGCTTAGAAGCAACATTCGA+AGG 0.592724 5_3:+16913945 None:intergenic
CATATTCACGTGTCGCTGCA+GGG 0.596003 5_3:+16911518 None:intergenic
GAGGATAGGGTAGAGAGAAG+AGG 0.598813 5_3:+16912507 None:intergenic
TGAAAGGACTCAGAGGAAAG+AGG 0.599318 5_3:-16913874 Msa0802490:CDS
CACCACTAGTCGAAGAAGTG+TGG 0.599546 5_3:-16911495 Msa0802490:CDS
AAGGAGTGTCTTTGAAACAA+GGG 0.599710 5_3:+16910394 None:intergenic
CCTCTAGATGTGAAGTTCAG+AGG 0.601302 5_3:-16914131 Msa0802490:CDS
CACGTATTTCCGGTGTGACG+GGG 0.601482 5_3:-16914082 Msa0802490:CDS
CTTAGCACTGATGCTAGTAA+CGG 0.601560 5_3:-16912949 Msa0802490:CDS
ACGACTATGAACCTTCTGAA+AGG 0.605948 5_3:-16910858 Msa0802490:CDS
GTTTGAAGATGTTAGAGCAG+TGG 0.606106 5_3:-16910541 Msa0802490:CDS
GCATGAGCGAAGGTTGCAAG+TGG 0.608881 5_3:-16910572 Msa0802490:CDS
TCTGATCTTTAAATCTAAGG+TGG 0.609023 5_3:+16915130 None:intergenic
CTCATAAGGGTGAATGCCAA+GGG 0.609756 5_3:-16910594 Msa0802490:CDS
GCATCTATTCTCTCAACCCA+AGG 0.609797 5_3:-16911603 Msa0802490:CDS
AAGCCATACCTGCTTAAACA+TGG 0.609945 5_3:+16912364 None:intergenic
AATGCCAAGGGCATGAGCGA+AGG 0.610410 5_3:-16910582 Msa0802490:CDS
TTTCCTCTGAGTCCTTTCAA+CGG 0.611134 5_3:+16913878 None:intergenic
GGGACATACTATATGCAGAA+GGG 0.611389 5_3:-16910837 Msa0802490:CDS
ACCGAAGCCGGTGAAGCTGA+AGG 0.614449 5_3:+16913975 None:intergenic
GGACATACTATATGCAGAAG+GGG 0.618757 5_3:-16910836 Msa0802490:CDS
GTCTCCTAATCATAGTCCAA+GGG 0.620517 5_3:-16914060 Msa0802490:CDS
ATGGTAATAATTGGGAAAGG+AGG 0.623968 5_3:-16909769 Msa0802490:three_prime_UTR
AGTTAAGCAAATTATGAAAG+CGG 0.624149 5_3:-16913562 Msa0802490:CDS
TATTAACATCTTAACAATGG+GGG 0.629113 5_3:-16915337 Msa0802490:five_prime_UTR
AGTACTCCGCAACATCTGGA+AGG 0.629530 5_3:+16911422 None:intergenic
GCACCAGACAGCAATGGCAG+CGG 0.631434 5_3:-16910477 Msa0802490:CDS
GAAATTAGGGAAATATTCGA+GGG 0.635307 5_3:-16913613 Msa0802490:CDS
AGGGACATACTATATGCAGA+AGG 0.636022 5_3:-16910838 Msa0802490:CDS
GACAAAGAATCTGGTCTATG+GGG 0.638895 5_3:-16913402 Msa0802490:CDS
ATTTACTGATCAAGAGCTGG+AGG 0.639867 5_3:-16912126 Msa0802490:CDS
TTATGATGATGGTCGTTACG+AGG 0.640902 5_3:-16912673 Msa0802490:CDS
GTTTCTAGAATGAATGGACA+AGG 0.641804 5_3:-16912020 Msa0802490:CDS
TATCTTGCACCAGACAGCAA+TGG 0.641825 5_3:-16910483 Msa0802490:CDS
GATGGTCGTTACGAGGAGGA+AGG 0.643902 5_3:-16912666 Msa0802490:CDS
TCTGTAATTGAATCCTCAGG+TGG 0.650948 5_3:+16910069 None:intergenic
CGGTGATTAATGAGGCGAAG+AGG 0.653038 5_3:-16913923 Msa0802490:CDS
TCATCAGGAACAGAAGCACC+CGG 0.654089 5_3:+16914230 None:intergenic
TGATGATGGTCGTTACGAGG+AGG 0.655963 5_3:-16912670 Msa0802490:CDS
ATTAGGAGACCCCGTCACAC+CGG 0.657996 5_3:+16914073 None:intergenic
TATGCAGAAGGGGTTACTCA+GGG 0.660136 5_3:-16910826 Msa0802490:CDS
CCAGGCTTCAGCTTGCGTGG+AGG 0.664286 5_3:+16913438 None:intergenic
GGTACTTCATAAGAAACCGG+TGG 0.665395 5_3:+16914164 None:intergenic
CCGGCGTATCCAGAGTACGT+TGG 0.671495 5_3:-16913834 Msa0802490:CDS
GATCCATGAGGCTGTCCATG+AGG 0.673737 5_3:+16912488 None:intergenic
GCCTCGTCTCTTGATCCATG+AGG 0.673748 5_3:+16912476 None:intergenic
CATGAGCGAAGGTTGCAAGT+GGG 0.675143 5_3:-16910571 Msa0802490:CDS
ACCCAAAAGTGAGTATCACG+TGG 0.685386 5_3:+16912696 None:intergenic
AACATGCAGATACACGACAA+AGG 0.688596 5_3:+16909863 None:intergenic
ACACCGGAAATACGTGACAT+CGG 0.696010 5_3:+16914089 None:intergenic
TTATTAACATCTTAACAATG+GGG 0.697625 5_3:-16915338 Msa0802490:five_prime_UTR
GCCTCATGGATCAAGAGACG+AGG 0.704715 5_3:-16912477 Msa0802490:CDS
AAATTACTATGGTCCACCTG+AGG 0.707677 5_3:-16910082 Msa0802490:CDS
AAGGACTCAGAGGAAAGAGG+TGG 0.708006 5_3:-16913871 Msa0802490:CDS
ATACCGTTGAAAGGACTCAG+AGG 0.712232 5_3:-16913881 Msa0802490:CDS
CCTGGACATTATAGCCACTG+GGG 0.716191 5_3:-16911557 Msa0802490:CDS
CCAACGTACTCTGGATACGC+CGG 0.717901 5_3:+16913834 None:intergenic
TGCTAGTAACGGGAACACTG+AGG 0.725800 5_3:-16912938 Msa0802490:CDS
GAATGCATCTAAATCCCCAG+TGG 0.756546 5_3:+16911543 None:intergenic
TCAGGAACAGAAGCACCCGG+CGG 0.793880 5_3:+16914233 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTAATTTTCTTAAGA+TGG - chr5_3:16910152-16910171 Msa0802490:CDS 10.0%
!!! TATTTAGTTACAATTTTTTT+TGG - chr5_3:16910707-16910726 Msa0802490:intron 10.0%
!! ATTATTAACATCTTAACAAT+GGG - chr5_3:16909780-16909799 Msa0802490:three_prime_UTR 15.0%
!!! AAAAATATTATCTTTTTCGT+TGG - chr5_3:16910083-16910102 Msa0802490:CDS 15.0%
!! TATTAATTAAACAAAGTAGT+TGG - chr5_3:16910175-16910194 Msa0802490:CDS 15.0%
!! TGTTAATACTATAATTCAAA+AGG - chr5_3:16910255-16910274 Msa0802490:CDS 15.0%
!! AATAAACAAAATTCAAATCA+AGG + chr5_3:16910404-16910423 None:intergenic 15.0%
!!! AGTTAATTTTTGTTTGATTT+TGG - chr5_3:16910425-16910444 Msa0802490:CDS 15.0%
!! ATCAATGTTAAAAATATTCA+AGG + chr5_3:16910639-16910658 None:intergenic 15.0%
!!! ATTTTTTTTGGATATTTTAG+AGG - chr5_3:16910719-16910738 Msa0802490:intron 15.0%
!!! TTTTTTTTGGATATTTTAGA+GGG - chr5_3:16910720-16910739 Msa0802490:intron 15.0%
!! TATGATTATGAATATAGATT+CGG - chr5_3:16913360-16913379 Msa0802490:intron 15.0%
!! ATTGTTAATATGTACTTAAT+GGG + chr5_3:16914480-16914499 None:intergenic 15.0%
!! TATTGTTAATATGTACTTAA+TGG + chr5_3:16914481-16914500 None:intergenic 15.0%
!! GATTATTAACATCTTAACAA+TGG - chr5_3:16909779-16909798 Msa0802490:three_prime_UTR 20.0%
!! TTATTAACATCTTAACAATG+GGG - chr5_3:16909781-16909800 Msa0802490:three_prime_UTR 20.0%
!!! AATTGTGTTACTATATAAAG+TGG + chr5_3:16910605-16910624 None:intergenic 20.0%
!! AAAAATATTCAAGGAAAAAG+AGG + chr5_3:16910630-16910649 None:intergenic 20.0%
!!! AGAAAATAAGAGTTTGTTAT+AGG - chr5_3:16911331-16911350 Msa0802490:intron 20.0%
!!! TATGATTTTGGAGATAAAAT+TGG + chr5_3:16911841-16911860 None:intergenic 20.0%
!!! ATAAGTCAAACTTATGATTT+TGG + chr5_3:16911853-16911872 None:intergenic 20.0%
!!! TTTGCCACTATTTTAATATT+CGG - chr5_3:16912311-16912330 Msa0802490:intron 20.0%
!! TAATCCGAATATTAAAATAG+TGG + chr5_3:16912318-16912337 None:intergenic 20.0%
!! TCCTTATCATTATCATATTT+CGG - chr5_3:16912338-16912357 Msa0802490:intron 20.0%
!! AACTGAAAATTCAAAGAAAA+AGG + chr5_3:16912387-16912406 None:intergenic 20.0%
!!! TTTTTCTTTGAATTTTCAGT+TGG - chr5_3:16912386-16912405 Msa0802490:CDS 20.0%
!!! TTTTTCTGTTCAAGATATTT+AGG + chr5_3:16912688-16912707 None:intergenic 20.0%
!!! CATCTGTAAATTTTAATGTT+CGG + chr5_3:16913820-16913839 None:intergenic 20.0%
!! AATTTACAGATGCTATAATT+AGG - chr5_3:16913828-16913847 Msa0802490:CDS 20.0%
!! ATTTACAGATGCTATAATTA+GGG - chr5_3:16913829-16913848 Msa0802490:CDS 20.0%
!!! ACTTTTACTATGGTAATAAT+TGG - chr5_3:16915341-16915360 Msa0802490:five_prime_UTR 20.0%
!!! CTTTTACTATGGTAATAATT+GGG - chr5_3:16915342-16915361 Msa0802490:five_prime_UTR 20.0%
! TATTAACATCTTAACAATGG+GGG - chr5_3:16909782-16909801 Msa0802490:three_prime_UTR 25.0%
! GAATCTGATCTTTAAATCTA+AGG + chr5_3:16909995-16910014 None:intergenic 25.0%
! TAAGAAACATACCATAATGT+TGG + chr5_3:16910132-16910151 None:intergenic 25.0%
! TCAAAAACAGACAAAAACAA+AGG + chr5_3:16910310-16910329 None:intergenic 25.0%
! ATAATGCTATTCAACTATGA+AGG - chr5_3:16910492-16910511 Msa0802490:CDS 25.0%
! CAAATTTCAATGTTTGATTG+CGG - chr5_3:16910519-16910538 Msa0802490:CDS 25.0%
! TTACTATATAAAGTGGTTCT+AGG + chr5_3:16910598-16910617 None:intergenic 25.0%
!!! GAAACATTGAAGTTTTTAAG+CGG - chr5_3:16910793-16910812 Msa0802490:CDS 25.0%
! AAAGATATGGATCATAATAG+AGG - chr5_3:16910829-16910848 Msa0802490:CDS 25.0%
! ATCATAATAGAGGAGATAAT+TGG - chr5_3:16910839-16910858 Msa0802490:CDS 25.0%
!! TAACTTTTAATACCGTTGAA+AGG - chr5_3:16911229-16911248 Msa0802490:intron 25.0%
! AGTTAAGCAAATTATGAAAG+CGG - chr5_3:16911557-16911576 Msa0802490:CDS 25.0%
! AATGAAAGCAGAAATATTCT+CGG + chr5_3:16911769-16911788 None:intergenic 25.0%
!! TGGAATATTATGTTTTCAGT+TGG - chr5_3:16911799-16911818 Msa0802490:intron 25.0%
!! GGAATATTATGTTTTCAGTT+GGG - chr5_3:16911800-16911819 Msa0802490:intron 25.0%
!! TCTGTTGTTATTCATTTGAT+AGG - chr5_3:16912094-16912113 Msa0802490:CDS 25.0%
!! TTGTTATTCATTTGATAGGA+AGG - chr5_3:16912098-16912117 Msa0802490:CDS 25.0%
! TGTTATTCATTTGATAGGAA+GGG - chr5_3:16912099-16912118 Msa0802490:CDS 25.0%
! AGAATATAAGAGGAAACATT+TGG - chr5_3:16912481-16912500 Msa0802490:CDS 25.0%
! GAATATAAGAGGAAACATTT+GGG - chr5_3:16912482-16912501 Msa0802490:CDS 25.0%
! GTATTCACTTAAATACTTGT+AGG - chr5_3:16912510-16912529 Msa0802490:CDS 25.0%
!! TATCTTAGCATTTTACTTGA+TGG - chr5_3:16913051-16913070 Msa0802490:intron 25.0%
!! ATTATGAATATAGATTCGGT+AGG - chr5_3:16913364-16913383 Msa0802490:intron 25.0%
!! TAATGATATCAGAAACCTTT+TGG - chr5_3:16913431-16913450 Msa0802490:CDS 25.0%
! CCTGAATAAAGATTGAAATA+GGG + chr5_3:16913464-16913483 None:intergenic 25.0%
! ACCTGAATAAAGATTGAAAT+AGG + chr5_3:16913465-16913484 None:intergenic 25.0%
! TTAATGTTCGGAATGAATAA+TGG + chr5_3:16913808-16913827 None:intergenic 25.0%
! ATACAATCTATAAGCTATAC+TGG + chr5_3:16913983-16914002 None:intergenic 25.0%
! AGATATTCAATATGCTTACT+TGG + chr5_3:16914414-16914433 None:intergenic 25.0%
! AGTAAGCATATTGAATATCT+AGG - chr5_3:16914414-16914433 Msa0802490:intron 25.0%
! ATGTACTTAATGGGAAAAAA+TGG + chr5_3:16914471-16914490 None:intergenic 25.0%
! CAATATTTCTTTGATATCTC+AGG - chr5_3:16914496-16914515 Msa0802490:intron 25.0%
! ACATAAAAGAGGTTCTTAAA+TGG - chr5_3:16914997-16915016 Msa0802490:intron 25.0%
! CATAAAAGAGGTTCTTAAAT+GGG - chr5_3:16914998-16915017 Msa0802490:intron 25.0%
! GAGAAAGATGAAAATTACTA+TGG - chr5_3:16915026-16915045 Msa0802490:intron 25.0%
! ACTAAAAAGTGAAAAGTTGT+TGG - chr5_3:16915211-16915230 Msa0802490:five_prime_UTR 25.0%
!!! GGAAACATTTACTTTTACTA+TGG - chr5_3:16915331-16915350 Msa0802490:five_prime_UTR 25.0%
TGTAGTAGTAGTAGTGATAT+GGG + chr5_3:16909819-16909838 None:intergenic 30.0%
TTCCTTTATCAAATGTGTAG+TGG - chr5_3:16909919-16909938 Msa0802490:three_prime_UTR 30.0%
TCCTTTATCAAATGTGTAGT+GGG - chr5_3:16909920-16909939 Msa0802490:three_prime_UTR 30.0%
TCTGATCTTTAAATCTAAGG+TGG + chr5_3:16909992-16910011 None:intergenic 30.0%
! CAGATTCATCCTTTTCTATA+AGG - chr5_3:16910008-16910027 Msa0802490:three_prime_UTR 30.0%
AGCTGAAAATTCCAACATTA+TGG - chr5_3:16910118-16910137 Msa0802490:CDS 30.0%
!!! TATAAAGTGGTTCTAGGTTT+TGG + chr5_3:16910592-16910611 None:intergenic 30.0%
!! TGTTGGTGATTACAAAGATA+TGG - chr5_3:16910816-16910835 Msa0802490:CDS 30.0%
ATAATAGAGGAGATAATTGG+AGG - chr5_3:16910842-16910861 Msa0802490:CDS 30.0%
TAATAGAGGAGATAATTGGA+GGG - chr5_3:16910843-16910862 Msa0802490:CDS 30.0%
ACGGTATTAAAAGTTACAAC+AGG + chr5_3:16911225-16911244 None:intergenic 30.0%
!! ATAAGAGTTTGTTATAGGTG+TGG - chr5_3:16911336-16911355 Msa0802490:intron 30.0%
! TTTGTTATAGGTGTGGTAAA+GGG - chr5_3:16911343-16911362 Msa0802490:intron 30.0%
TGAAATTAGGGAAATATTCG+AGG - chr5_3:16911505-16911524 Msa0802490:CDS 30.0%
GAAATTAGGGAAATATTCGA+GGG - chr5_3:16911506-16911525 Msa0802490:CDS 30.0%
!! ATAATTTGCTTAACTTCCAG+AGG + chr5_3:16911552-16911571 None:intergenic 30.0%
TTTATTTGTAATCAGAGAGC+AGG - chr5_3:16912063-16912082 Msa0802490:CDS 30.0%
GTTATTCATTTGATAGGAAG+GGG - chr5_3:16912100-16912119 Msa0802490:CDS 30.0%
TTTGAACTAATGATTCTGTC+AGG + chr5_3:16912131-16912150 None:intergenic 30.0%
AGTTCAAACTTGAATTTCTC+TGG - chr5_3:16912143-16912162 Msa0802490:CDS 30.0%
GTTCAAACTTGAATTTCTCT+GGG - chr5_3:16912144-16912163 Msa0802490:CDS 30.0%
AGATTACAAAACTCGAATTG+AGG - chr5_3:16912222-16912241 Msa0802490:intron 30.0%
GATTACAAAACTCGAATTGA+GGG - chr5_3:16912223-16912242 Msa0802490:intron 30.0%
TAGTGGCAAAAAAACTCTAT+TGG + chr5_3:16912301-16912320 None:intergenic 30.0%
! GCCGAAATATGATAATGATA+AGG + chr5_3:16912342-16912361 None:intergenic 30.0%
GAAGGTCAAAAGAATATAAG+AGG - chr5_3:16912471-16912490 Msa0802490:CDS 30.0%
! TTACGAATTTTTCTCATGAC+AGG - chr5_3:16912567-16912586 Msa0802490:intron 30.0%
TTCAAGATATTTAGGAACTG+TGG + chr5_3:16912680-16912699 None:intergenic 30.0%
TTCTTCTTCTTGGAATTCAA+GGG - chr5_3:16912719-16912738 Msa0802490:intron 30.0%
TATAACATGATTCTCTTCTG+CGG - chr5_3:16912925-16912944 Msa0802490:CDS 30.0%
TTTGTTCCCGTACAAAAATT+TGG + chr5_3:16912974-16912993 None:intergenic 30.0%
ATGTTTCGAATGCATGTTTA+GGG + chr5_3:16913284-16913303 None:intergenic 30.0%
AGGTGTTAATGTTAATTCTG+CGG - chr5_3:16913384-16913403 Msa0802490:intron 30.0%
AAATAGGGTAAAACACCAAA+AGG + chr5_3:16913449-16913468 None:intergenic 30.0%
CCCTATTTCAATCTTTATTC+AGG - chr5_3:16913461-16913480 Msa0802490:CDS 30.0%
AATCTTTATTCAGGTAGCAA+TGG - chr5_3:16913470-16913489 Msa0802490:CDS 30.0%
! AAGCTCATCTTTTCTTTTGA+AGG + chr5_3:16913672-16913691 None:intergenic 30.0%
TGATTAGATAAGCAATTACC+CGG + chr5_3:16913730-16913749 None:intergenic 30.0%
!! CTGTAATTTTAAGAAGACTC+CGG + chr5_3:16913762-16913781 None:intergenic 30.0%
GAGTCTTCTTAAAATTACAG+TGG - chr5_3:16913762-16913781 Msa0802490:CDS 30.0%
TAATTAGGGATGGTTTAGAT+TGG - chr5_3:16913843-16913862 Msa0802490:CDS 30.0%
TTGTAAGCGCTTAATTAAGT+TGG - chr5_3:16914077-16914096 Msa0802490:CDS 30.0%
CAATAAACTTAGGTCATGTT+TGG + chr5_3:16914107-16914126 None:intergenic 30.0%
CAAACATGACCTAAGTTTAT+TGG - chr5_3:16914105-16914124 Msa0802490:CDS 30.0%
GCTATGCATCATAATAGAAA+CGG - chr5_3:16914127-16914146 Msa0802490:CDS 30.0%
! AATGTTTTCATTTTCAGCCT+TGG - chr5_3:16914166-16914185 Msa0802490:CDS 30.0%
! ATGTTTTCATTTTCAGCCTT+GGG - chr5_3:16914167-16914186 Msa0802490:CDS 30.0%
!! TGCTTTGAATCATCTTGTTT+TGG + chr5_3:16914677-16914696 None:intergenic 30.0%
AAACAAGATGATTCAAAGCA+AGG - chr5_3:16914677-16914696 Msa0802490:intron 30.0%
AAAAAGTTTCTTTCCTGTGA+TGG + chr5_3:16914925-16914944 None:intergenic 30.0%
! AACTTTTTGTTGCACAAGTT+AGG - chr5_3:16914937-16914956 Msa0802490:intron 30.0%
! ACTTTTTGTTGCACAAGTTA+GGG - chr5_3:16914938-16914957 Msa0802490:intron 30.0%
AGCATTCAAGTACATAAAAG+AGG - chr5_3:16914986-16915005 Msa0802490:intron 30.0%
ATATCTGTAATTGAATCCTC+AGG + chr5_3:16915056-16915075 None:intergenic 30.0%
!!! TCACCTATTTTGCTATTAAG+AGG - chr5_3:16915131-16915150 Msa0802490:five_prime_UTR 30.0%
CAACCTCTTAATAGCAAAAT+AGG + chr5_3:16915137-16915156 None:intergenic 30.0%
!!! TTTTGCTATTAAGAGGTTGT+TGG - chr5_3:16915138-16915157 Msa0802490:five_prime_UTR 30.0%
TTGGAAAAAATGTAACATGC+TGG - chr5_3:16915157-16915176 Msa0802490:five_prime_UTR 30.0%
!! TTGTTGGTAGAGTTCTTTTT+AGG - chr5_3:16915227-16915246 Msa0802490:five_prime_UTR 30.0%
!!! TGACGTTTTTTAAGACTTGT+TGG - chr5_3:16915310-16915329 Msa0802490:five_prime_UTR 30.0%
ACTATGGTAATAATTGGGAA+AGG - chr5_3:16915347-16915366 Msa0802490:five_prime_UTR 30.0%
GTGTAGTAGTAGTAGTGATA+TGG + chr5_3:16909820-16909839 None:intergenic 35.0%
AATGAGAAAGAGAAAGATGG+TGG + chr5_3:16909900-16909919 None:intergenic 35.0%
GGAAATGAGAAAGAGAAAGA+TGG + chr5_3:16909903-16909922 None:intergenic 35.0%
ACCCACTACACATTTGATAA+AGG + chr5_3:16909924-16909943 None:intergenic 35.0%
! GAGAGTGTACCTTATAGAAA+AGG + chr5_3:16910020-16910039 None:intergenic 35.0%
!! TGGATATTTTAGAGGGAACA+AGG - chr5_3:16910727-16910746 Msa0802490:CDS 35.0%
!! TTGAAGTTTTTAAGCGGTGT+TGG - chr5_3:16910799-16910818 Msa0802490:CDS 35.0%
TTCGGTACTTCATAAGAAAC+CGG + chr5_3:16910961-16910980 None:intergenic 35.0%
!! GTTTGTTATAGGTGTGGTAA+AGG - chr5_3:16911342-16911361 Msa0802490:intron 35.0%
! AATCCAAGCGTCTGAAATTA+GGG - chr5_3:16911493-16911512 Msa0802490:CDS 35.0%
TATTGGTACGACAAAGAATC+TGG - chr5_3:16911708-16911727 Msa0802490:intron 35.0%
! TGCTTTCATTTTCGCATGTA+TGG - chr5_3:16911779-16911798 Msa0802490:intron 35.0%
AGTTCTGCTATAGTCTCTAT+TGG + chr5_3:16911969-16911988 None:intergenic 35.0%
AACACTGAGGTTTACATCAA+TGG - chr5_3:16912194-16912213 Msa0802490:intron 35.0%
!!! CACTTTTGGGTTTATGATGA+TGG - chr5_3:16912435-16912454 Msa0802490:CDS 35.0%
CTTCTTCTTCTTGGAATTCA+AGG - chr5_3:16912718-16912737 Msa0802490:intron 35.0%
CAAATTTACTGATCAAGAGC+TGG - chr5_3:16912990-16913009 Msa0802490:CDS 35.0%
!! GTTTCTAGAATGAATGGACA+AGG - chr5_3:16913099-16913118 Msa0802490:intron 35.0%
CATGTTTCGAATGCATGTTT+AGG + chr5_3:16913285-16913304 None:intergenic 35.0%
GGTGTTAATGTTAATTCTGC+GGG - chr5_3:16913385-16913404 Msa0802490:intron 35.0%
TATCTAATCATCCTCGAAAC+CGG - chr5_3:16913740-16913759 Msa0802490:CDS 35.0%
ACAGATGCTATAATTAGGGA+TGG - chr5_3:16913833-16913852 Msa0802490:CDS 35.0%
GATGCATAGCCAATAAACTT+AGG + chr5_3:16914117-16914136 None:intergenic 35.0%
! TGTTTTCATTTTCAGCCTTG+GGG - chr5_3:16914168-16914187 Msa0802490:CDS 35.0%
!!! TAATGTGCTCGCTTTTTTTC+AGG - chr5_3:16914220-16914239 Msa0802490:CDS 35.0%
TATAGTATGTCCCTTTCAGA+AGG + chr5_3:16914275-16914294 None:intergenic 35.0%
CTGTATAAGCTTCGAACTTT+GGG + chr5_3:16914361-16914380 None:intergenic 35.0%
TCTGTATAAGCTTCGAACTT+TGG + chr5_3:16914362-16914381 None:intergenic 35.0%
CAATATGCTTACTTGGTCAT+TGG + chr5_3:16914407-16914426 None:intergenic 35.0%
CTTAATGGGAAAAAATGGTG+CGG + chr5_3:16914466-16914485 None:intergenic 35.0%
!! AAGGAGTGTCTTTGAAACAA+GGG + chr5_3:16914728-16914747 None:intergenic 35.0%
!! AAAGGAGTGTCTTTGAAACA+AGG + chr5_3:16914729-16914748 None:intergenic 35.0%
TCTTCGAGGAAAAAATGAGA+AGG - chr5_3:16914775-16914794 Msa0802490:intron 35.0%
! AAAAATGTAACATGCTGGCT+AGG - chr5_3:16915162-16915181 Msa0802490:five_prime_UTR 35.0%
ATGGTAATAATTGGGAAAGG+AGG - chr5_3:16915350-16915369 Msa0802490:five_prime_UTR 35.0%
!! GACTGTGACTTGTTCTTCAT+AGG - chr5_3:16910558-16910577 Msa0802490:CDS 40.0%
!! TCAAGATTAGAAGCGTCATC+AGG + chr5_3:16910907-16910926 None:intergenic 40.0%
TCTTGATTACTCGACAGCTT+CGG - chr5_3:16910921-16910940 Msa0802490:intron 40.0%
TCGACAGCTTCGGAATATTT+AGG - chr5_3:16910931-16910950 Msa0802490:intron 40.0%
TTCGGAATATTTAGGTCCAC+CGG - chr5_3:16910939-16910958 Msa0802490:intron 40.0%
ACATCTAGAGGCTCAACTTT+CGG + chr5_3:16910979-16910998 None:intergenic 40.0%
AAATACGTGACATCGGCAAA+GGG + chr5_3:16911026-16911045 None:intergenic 40.0%
GTCTCCTAATCATAGTCCAA+GGG - chr5_3:16911059-16911078 Msa0802490:intron 40.0%
! GGTTTCTGTGTTACTAAACC+CGG - chr5_3:16911104-16911123 Msa0802490:intron 40.0%
! TTCGAATGTTGCTTCTAAGC+CGG - chr5_3:16911176-16911195 Msa0802490:intron 40.0%
TTCTAAGCCGGTGATTAATG+AGG - chr5_3:16911188-16911207 Msa0802490:intron 40.0%
TTTCCTCTGAGTCCTTTCAA+CGG + chr5_3:16911244-16911263 None:intergenic 40.0%
CGCAAATGTGTAACATGCAT+CGG - chr5_3:16911456-16911475 Msa0802490:CDS 40.0%
! GAATCCAAGCGTCTGAAATT+AGG - chr5_3:16911492-16911511 Msa0802490:CDS 40.0%
TTTCCCTAATTTCAGACGCT+TGG + chr5_3:16911499-16911518 None:intergenic 40.0%
GAAAGCGGAGAAAGAATGTT+CGG - chr5_3:16911572-16911591 Msa0802490:CDS 40.0%
AGTAAGTCTTCCATCTCATC+AGG + chr5_3:16911648-16911667 None:intergenic 40.0%
GATGAGATGGAAGACTTACT+TGG - chr5_3:16911648-16911667 Msa0802490:intron 40.0%
TTGTCGTACCAATATCTACC+AGG + chr5_3:16911702-16911721 None:intergenic 40.0%
ACGACAAAGAATCTGGTCTA+TGG - chr5_3:16911715-16911734 Msa0802490:intron 40.0%
CGACAAAGAATCTGGTCTAT+GGG - chr5_3:16911716-16911735 Msa0802490:intron 40.0%
GACAAAGAATCTGGTCTATG+GGG - chr5_3:16911717-16911736 Msa0802490:intron 40.0%
!! CTTAGCACTGATGCTAGTAA+CGG - chr5_3:16912170-16912189 Msa0802490:intron 40.0%
!! TTAGCACTGATGCTAGTAAC+GGG - chr5_3:16912171-16912190 Msa0802490:intron 40.0%
TTCGGCATCATTGAACTCAA+TGG - chr5_3:16912356-16912375 Msa0802490:intron 40.0%
!! TCCACGTGATACTCACTTTT+GGG - chr5_3:16912422-16912441 Msa0802490:CDS 40.0%
!! TTATGATGATGGTCGTTACG+AGG - chr5_3:16912446-16912465 Msa0802490:CDS 40.0%
AAGAGGAAACATTTGGGAGA+AGG - chr5_3:16912488-16912507 Msa0802490:CDS 40.0%
ACTCAGAAGCTTCTTCTTCT+TGG - chr5_3:16912709-16912728 Msa0802490:CDS 40.0%
AACTAGCACCATGTTTAAGC+AGG - chr5_3:16912747-16912766 Msa0802490:intron 40.0%
AAGCCATACCTGCTTAAACA+TGG + chr5_3:16912758-16912777 None:intergenic 40.0%
! GAAGTACTTGTACACTCGTA+TGG + chr5_3:16912822-16912841 None:intergenic 40.0%
TGATCTTATGATTGCTGAGC+AGG - chr5_3:16912948-16912967 Msa0802490:CDS 40.0%
! GAGCAGGCCAAATTTTTGTA+CGG - chr5_3:16912964-16912983 Msa0802490:CDS 40.0%
! AGCAGGCCAAATTTTTGTAC+GGG - chr5_3:16912965-16912984 Msa0802490:CDS 40.0%
ATTTACTGATCAAGAGCTGG+AGG - chr5_3:16912993-16913012 Msa0802490:CDS 40.0%
!! GAGGCTGTTTCTAGAATGAA+TGG - chr5_3:16913093-16913112 Msa0802490:intron 40.0%
! TCGAATGCATGTTTAGGGTT+AGG + chr5_3:16913279-16913298 None:intergenic 40.0%
TATAATGTCCAGGAGCCAAT+CGG + chr5_3:16913555-16913574 None:intergenic 40.0%
TCTATAAGCTATACTGGAGC+TGG + chr5_3:16913977-16913996 None:intergenic 40.0%
TCAATACCTTAATCTCCCCA+AGG + chr5_3:16914186-16914205 None:intergenic 40.0%
ACGACTATGAACCTTCTGAA+AGG - chr5_3:16914261-16914280 Msa0802490:CDS 40.0%
! CGACTATGAACCTTCTGAAA+GGG - chr5_3:16914262-16914281 Msa0802490:CDS 40.0%
AGGGACATACTATATGCAGA+AGG - chr5_3:16914281-16914300 Msa0802490:CDS 40.0%
GGGACATACTATATGCAGAA+GGG - chr5_3:16914282-16914301 Msa0802490:CDS 40.0%
GGACATACTATATGCAGAAG+GGG - chr5_3:16914283-16914302 Msa0802490:CDS 40.0%
ATCTCAGGTACCAACTCATA+AGG - chr5_3:16914511-16914530 Msa0802490:intron 40.0%
TCTCAGGTACCAACTCATAA+GGG - chr5_3:16914512-16914531 Msa0802490:intron 40.0%
GTTTGAAGATGTTAGAGCAG+TGG - chr5_3:16914578-16914597 Msa0802490:intron 40.0%
TAACTGATCGTAGTCGCTTA+GGG + chr5_3:16914616-16914635 None:intergenic 40.0%
ATAACTGATCGTAGTCGCTT+AGG + chr5_3:16914617-16914636 None:intergenic 40.0%
! CAAGGAGCTTTTCGAAACAA+TGG - chr5_3:16914695-16914714 Msa0802490:intron 40.0%
TAACAAATACGACGTCTTCG+AGG - chr5_3:16914761-16914780 Msa0802490:intron 40.0%
AAGCTTGATGTGCTAGTGAT+TGG + chr5_3:16914863-16914882 None:intergenic 40.0%
!! TTCCTGTGATGGATGCATAA+AGG + chr5_3:16914914-16914933 None:intergenic 40.0%
AAATTACTATGGTCCACCTG+AGG - chr5_3:16915037-16915056 Msa0802490:intron 40.0%
TCTGTAATTGAATCCTCAGG+TGG + chr5_3:16915053-16915072 None:intergenic 40.0%
AACATGCAGATACACGACAA+AGG + chr5_3:16915259-16915278 None:intergenic 40.0%
ATCTGCATGTTTGCATTCTG+TGG - chr5_3:16915268-16915287 Msa0802490:five_prime_UTR 40.0%
TTAACAATGGGGGCCTAAGT+GGG - chr5_3:16909792-16909811 Msa0802490:three_prime_UTR 45.0%
TAGTGATATGGGTCCCACTT+AGG + chr5_3:16909808-16909827 None:intergenic 45.0%
AGGAGATAATTGGAGGGAAG+TGG - chr5_3:16910849-16910868 Msa0802490:CDS 45.0%
GGTACTTCATAAGAAACCGG+TGG + chr5_3:16910958-16910977 None:intergenic 45.0%
CCTCTGAACTTCACATCTAG+AGG + chr5_3:16910991-16911010 None:intergenic 45.0%
CCTCTAGATGTGAAGTTCAG+AGG - chr5_3:16910988-16911007 Msa0802490:intron 45.0%
GAAATACGTGACATCGGCAA+AGG + chr5_3:16911027-16911046 None:intergenic 45.0%
TTGCCGATGTCACGTATTTC+CGG - chr5_3:16911027-16911046 Msa0802490:intron 45.0%
ACACCGGAAATACGTGACAT+CGG + chr5_3:16911033-16911052 None:intergenic 45.0%
GGTCTCCTAATCATAGTCCA+AGG - chr5_3:16911058-16911077 Msa0802490:intron 45.0%
GACACCCTTGGACTATGATT+AGG + chr5_3:16911066-16911085 None:intergenic 45.0%
!! AATCATAGTCCAAGGGTGTC+TGG - chr5_3:16911066-16911085 Msa0802490:intron 45.0%
GTCTGGAAGTTCAGAATCTG+TGG - chr5_3:16911083-16911102 Msa0802490:intron 45.0%
CTAAACCCGGATCTTTCTTC+TGG - chr5_3:16911117-16911136 Msa0802490:intron 45.0%
GAAGGATTATGAACCGAAGC+CGG + chr5_3:16911159-16911178 None:intergenic 45.0%
GGCTTAGAAGCAACATTCGA+AGG + chr5_3:16911177-16911196 None:intergenic 45.0%
CTCTTCGCCTCATTAATCAC+CGG + chr5_3:16911198-16911217 None:intergenic 45.0%
ATACCGTTGAAAGGACTCAG+AGG - chr5_3:16911238-16911257 Msa0802490:intron 45.0%
TGAAAGGACTCAGAGGAAAG+AGG - chr5_3:16911245-16911264 Msa0802490:intron 45.0%
TTCACAACTCCAACGTACTC+TGG + chr5_3:16911297-16911316 None:intergenic 45.0%
ATAGGTGTGGTAAAGGGAAG+TGG - chr5_3:16911349-16911368 Msa0802490:intron 45.0%
TAGGTGTGGTAAAGGGAAGT+GGG - chr5_3:16911350-16911369 Msa0802490:intron 45.0%
AGACGCTTGGATTCGTCAAT+AGG + chr5_3:16911486-16911505 None:intergenic 45.0%
TCTCCTCAAACCTGATGAGA+TGG - chr5_3:16911635-16911654 Msa0802490:CDS 45.0%
CTTCCATCTCATCAGGTTTG+AGG + chr5_3:16911641-16911660 None:intergenic 45.0%
AGCTGAAGCCTGGTAGATAT+TGG - chr5_3:16911691-16911710 Msa0802490:intron 45.0%
AGAATCTGGTCTATGGGGAA+AGG - chr5_3:16911722-16911741 Msa0802490:intron 45.0%
!! AACTCGAATTGAGGGTACTC+AGG - chr5_3:16912231-16912250 Msa0802490:intron 45.0%
!! ACTCGAATTGAGGGTACTCA+GGG - chr5_3:16912232-16912251 Msa0802490:intron 45.0%
! GTCCACGTGATACTCACTTT+TGG - chr5_3:16912421-16912440 Msa0802490:CDS 45.0%
ACCCAAAAGTGAGTATCACG+TGG + chr5_3:16912426-16912445 None:intergenic 45.0%
AGGATAGGGTAGAGAGAAGA+GGG + chr5_3:16912614-16912633 None:intergenic 45.0%
TTCTCTCTACCCTATCCTCA+TGG - chr5_3:16912616-16912635 Msa0802490:intron 45.0%
CTTCTTGGAATTCAAGGGTC+TGG - chr5_3:16912724-16912743 Msa0802490:intron 45.0%
GCACCATGTTTAAGCAGGTA+TGG - chr5_3:16912752-16912771 Msa0802490:intron 45.0%
!!! TGGAAGAGAGCGTTTTGAAG+AGG - chr5_3:16913071-16913090 Msa0802490:intron 45.0%
!!! AAGAGAGCGTTTTGAAGAGG+AGG - chr5_3:16913074-16913093 Msa0802490:intron 45.0%
AGGTTCTCCTGCTCACATTA+TGG - chr5_3:16913119-16913138 Msa0802490:intron 45.0%
TCGAAACATGCATGCGTACA+TGG - chr5_3:16913295-16913314 Msa0802490:intron 45.0%
GCATCTATTCTCTCAACCCA+AGG - chr5_3:16913516-16913535 Msa0802490:CDS 45.0%
CGGAAAAATGCTTCAGCCTT+GGG + chr5_3:16913535-16913554 None:intergenic 45.0%
TCGGAAAAATGCTTCAGCCT+TGG + chr5_3:16913536-16913555 None:intergenic 45.0%
!! GGCTGAAGCATTTTTCCGAT+TGG - chr5_3:16913537-16913556 Msa0802490:CDS 45.0%
TCCTGGACATTATAGCCACT+GGG - chr5_3:16913561-16913580 Msa0802490:CDS 45.0%
GAATGCATCTAAATCCCCAG+TGG + chr5_3:16913579-16913598 None:intergenic 45.0%
TTCCACACTTCTTCGACTAG+TGG + chr5_3:16913629-16913648 None:intergenic 45.0%
TTGAAGGTCACTTGTATCGC+TGG + chr5_3:16913656-16913675 None:intergenic 45.0%
TCACTTCCTTCCAGATGTTG+CGG - chr5_3:16913691-16913710 Msa0802490:CDS 45.0%
!! AAGAAGTACTCCGCAACATC+TGG + chr5_3:16913704-16913723 None:intergenic 45.0%
! TTGCGGAGTACTTCTTAAGC+CGG - chr5_3:16913708-16913727 Msa0802490:CDS 45.0%
TTAAGAAGACTCCGGTTTCG+AGG + chr5_3:16913754-16913773 None:intergenic 45.0%
TTTCAGCCTTGGGGAGATTA+AGG - chr5_3:16914177-16914196 Msa0802490:CDS 45.0%
ATATGCAGAAGGGGTTACTC+AGG - chr5_3:16914292-16914311 Msa0802490:exon 45.0%
TATGCAGAAGGGGTTACTCA+GGG - chr5_3:16914293-16914312 Msa0802490:exon 45.0%
GGTTACTCAGGGAAATGGTT+TGG - chr5_3:16914304-16914323 Msa0802490:exon 45.0%
!! GGGAAATGGTTTGGCTTTCA+TGG - chr5_3:16914313-16914332 Msa0802490:five_prime_UTR 45.0%
TTGGTTGCAACTGAGCATCA+AGG + chr5_3:16914388-16914407 None:intergenic 45.0%
TGGCATTCACCCTTATGAGT+TGG + chr5_3:16914524-16914543 None:intergenic 45.0%
ACTCATAAGGGTGAATGCCA+AGG - chr5_3:16914524-16914543 Msa0802490:intron 45.0%
CTCATAAGGGTGAATGCCAA+GGG - chr5_3:16914525-16914544 Msa0802490:intron 45.0%
TATCTTGCACCAGACAGCAA+TGG - chr5_3:16914636-16914655 Msa0802490:intron 45.0%
TATCCCTCAACGCTTGTGAA+TGG - chr5_3:16914799-16914818 Msa0802490:intron 45.0%
!! GAACCATTCACAAGCGTTGA+GGG + chr5_3:16914805-16914824 None:intergenic 45.0%
! TGAACCATTCACAAGCGTTG+AGG + chr5_3:16914806-16914825 None:intergenic 45.0%
GACCTTTATGCATCCATCAC+AGG - chr5_3:16914909-16914928 Msa0802490:intron 45.0%
TTGTTGCACAAGTTAGGGCA+AGG - chr5_3:16914943-16914962 Msa0802490:intron 45.0%
TGTTGCACAAGTTAGGGCAA+GGG - chr5_3:16914944-16914963 Msa0802490:intron 45.0%
!! TCTGTGGAAGCACTGTTCAT+TGG - chr5_3:16915284-16915303 Msa0802490:five_prime_UTR 45.0%
CTTAACAATGGGGGCCTAAG+TGG - chr5_3:16909791-16909810 Msa0802490:three_prime_UTR 50.0%
!! TCATCAGGAACAGAAGCACC+CGG + chr5_3:16910892-16910911 None:intergenic 50.0%
GTCACGTATTTCCGGTGTGA+CGG - chr5_3:16911035-16911054 Msa0802490:intron 50.0%
TCACGTATTTCCGGTGTGAC+GGG - chr5_3:16911036-16911055 Msa0802490:intron 50.0%
TCTGAACTTCCAGACACCCT+TGG + chr5_3:16911078-16911097 None:intergenic 50.0%
GCGAACCAGAAGAAAGATCC+GGG + chr5_3:16911125-16911144 None:intergenic 50.0%
GGCGAACCAGAAGAAAGATC+CGG + chr5_3:16911126-16911145 None:intergenic 50.0%
CGGTGATTAATGAGGCGAAG+AGG - chr5_3:16911196-16911215 Msa0802490:intron 50.0%
AAGGACTCAGAGGAAAGAGG+TGG - chr5_3:16911248-16911267 Msa0802490:intron 50.0%
CGATGGGATCAATGCCTGAA+GGG - chr5_3:16911433-16911452 Msa0802490:CDS 50.0%
GTTACACATTTGCGCCCTTC+AGG + chr5_3:16911450-16911469 None:intergenic 50.0%
GCTTGGATTCGTCAATAGGC+TGG + chr5_3:16911482-16911501 None:intergenic 50.0%
TTCCAGAGGACTCAACAGTC+GGG + chr5_3:16911538-16911557 None:intergenic 50.0%
CTTCCAGAGGACTCAACAGT+CGG + chr5_3:16911539-16911558 None:intergenic 50.0%
CCAGAGCAGTTGAGTGTCAA+CGG - chr5_3:16911609-16911628 Msa0802490:CDS 50.0%
TTCAGCTTGCGTGGAGGTAA+GGG + chr5_3:16911678-16911697 None:intergenic 50.0%
! TGCTAGTAACGGGAACACTG+AGG - chr5_3:16912181-16912200 Msa0802490:intron 50.0%
!! TGATGATGGTCGTTACGAGG+AGG - chr5_3:16912449-16912468 Msa0802490:CDS 50.0%
GAGGATAGGGTAGAGAGAAG+AGG + chr5_3:16912615-16912634 None:intergenic 50.0%
TGAGGCTGTCCATGAGGATA+GGG + chr5_3:16912628-16912647 None:intergenic 50.0%
ATGAGGCTGTCCATGAGGAT+AGG + chr5_3:16912629-16912648 None:intergenic 50.0%
TATCCTCATGGACAGCCTCA+TGG - chr5_3:16912628-16912647 Msa0802490:intron 50.0%
CCAGCTTCCATAATGTGAGC+AGG + chr5_3:16913129-16913148 None:intergenic 50.0%
CCTGCTCACATTATGGAAGC+TGG - chr5_3:16913126-16913145 Msa0802490:intron 50.0%
!! GCATTTTTCCGATTGGCTCC+TGG - chr5_3:16913544-16913563 Msa0802490:CDS 50.0%
CTCCTGGACATTATAGCCAC+TGG - chr5_3:16913560-16913579 Msa0802490:CDS 50.0%
CCTGGACATTATAGCCACTG+GGG - chr5_3:16913562-16913581 Msa0802490:CDS 50.0%
! CATATTCACGTGTCGCTGCA+GGG + chr5_3:16913604-16913623 None:intergenic 50.0%
CACCACTAGTCGAAGAAGTG+TGG - chr5_3:16913624-16913643 Msa0802490:CDS 50.0%
AGTACTCCGCAACATCTGGA+AGG + chr5_3:16913700-16913719 None:intergenic 50.0%
! TGCGGAGTACTTCTTAAGCC+GGG - chr5_3:16913709-16913728 Msa0802490:CDS 50.0%
GAAGGGGTTACTCAGGGAAA+TGG - chr5_3:16914299-16914318 Msa0802490:exon 50.0%
CATGAGCGAAGGTTGCAAGT+GGG - chr5_3:16914548-16914567 Msa0802490:intron 50.0%
GGTGAAGAAGATGCTTCCGC+CGG - chr5_3:16910870-16910889 Msa0802490:CDS 55.0%
GTGAAGAAGATGCTTCCGCC+GGG - chr5_3:16910871-16910890 Msa0802490:CDS 55.0%
CACGTATTTCCGGTGTGACG+GGG - chr5_3:16911037-16911056 Msa0802490:intron 55.0%
ATTAGGAGACCCCGTCACAC+CGG + chr5_3:16911049-16911068 None:intergenic 55.0%
TGGTTCGCCTTCAGCTTCAC+CGG - chr5_3:16911137-16911156 Msa0802490:intron 55.0%
GACTCAGAGGAAAGAGGTGG+TGG - chr5_3:16911251-16911270 Msa0802490:intron 55.0%
! TCAGAGGAAAGAGGTGGTGG+AGG - chr5_3:16911254-16911273 Msa0802490:intron 55.0%
CCAACGTACTCTGGATACGC+CGG + chr5_3:16911288-16911307 None:intergenic 55.0%
ATTGCAGCAGCTGTGTGCTC+AGG - chr5_3:16911409-16911428 Msa0802490:intron 55.0%
TTGCAGCAGCTGTGTGCTCA+GGG - chr5_3:16911410-16911429 Msa0802490:intron 55.0%
GCGATGGGATCAATGCCTGA+AGG - chr5_3:16911432-16911451 Msa0802490:CDS 55.0%
ATCCCGACTGTTGAGTCCTC+TGG - chr5_3:16911533-16911552 Msa0802490:CDS 55.0%
CCGTTGACACTCAACTGCTC+TGG + chr5_3:16911612-16911631 None:intergenic 55.0%
CTTCAGCTTGCGTGGAGGTA+AGG + chr5_3:16911679-16911698 None:intergenic 55.0%
GATGGTCGTTACGAGGAGGA+AGG - chr5_3:16912453-16912472 Msa0802490:CDS 55.0%
GATCCATGAGGCTGTCCATG+AGG + chr5_3:16912634-16912653 None:intergenic 55.0%
GCCTCATGGATCAAGAGACG+AGG - chr5_3:16912642-16912661 Msa0802490:CDS 55.0%
GCCTCGTCTCTTGATCCATG+AGG + chr5_3:16912646-16912665 None:intergenic 55.0%
CCCCAGTGGCTATAATGTCC+AGG + chr5_3:16913565-16913584 None:intergenic 55.0%
! GCATATTCACGTGTCGCTGC+AGG + chr5_3:16913605-16913624 None:intergenic 55.0%
ATACTGGAGCTGGCGAGCTT+AGG + chr5_3:16913967-16913986 None:intergenic 55.0%
! AATGCCAAGGGCATGAGCGA+AGG - chr5_3:16914537-16914556 Msa0802490:intron 55.0%
GCATGAGCGAAGGTTGCAAG+TGG - chr5_3:16914547-16914566 Msa0802490:intron 55.0%
TTGTTGTCGTGTGCGCGAAC+GGG + chr5_3:16914840-16914859 None:intergenic 55.0%
GTTGTTGTCGTGTGCGCGAA+CGG + chr5_3:16914841-16914860 None:intergenic 55.0%
!! TCAGGAACAGAAGCACCCGG+CGG + chr5_3:16910889-16910908 None:intergenic 60.0%
!! GCCTTCAGCTTCACCGGCTT+CGG - chr5_3:16911143-16911162 Msa0802490:intron 60.0%
ACCGAAGCCGGTGAAGCTGA+AGG + chr5_3:16911147-16911166 None:intergenic 60.0%
!! GGTGGTGGAGGTTGTGAAGC+CGG - chr5_3:16911266-16911285 Msa0802490:intron 60.0%
CCGGCGTATCCAGAGTACGT+TGG - chr5_3:16911285-16911304 Msa0802490:intron 60.0%
AGCTGTGTGCTCAGGGCGAT+GGG - chr5_3:16911417-16911436 Msa0802490:CDS 60.0%
CTACCAGGCTTCAGCTTGCG+TGG + chr5_3:16911687-16911706 None:intergenic 60.0%
GCAACCTTCGCTCATGCCCT+TGG + chr5_3:16914544-16914563 None:intergenic 60.0%
GCACCAGACAGCAATGGCAG+CGG - chr5_3:16914642-16914661 Msa0802490:intron 60.0%
GTTCCGCTGCCATTGCTGTC+TGG + chr5_3:16914648-16914667 None:intergenic 60.0%
CAGCTGTGTGCTCAGGGCGA+TGG - chr5_3:16911416-16911435 Msa0802490:CDS 65.0%
CCAGGCTTCAGCTTGCGTGG+AGG + chr5_3:16911684-16911703 None:intergenic 65.0%
CCTCCACGCAAGCTGAAGCC+TGG - chr5_3:16911681-16911700 Msa0802490:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 16909749 16915392 16909749 ID=Msa0802490;Name=Msa0802490
chr5_3 mRNA 16909749 16915392 16909749 ID=Msa0802490-mRNA-1;Parent=Msa0802490;Name=Msa0802490-mRNA-1;_AED=0.09;_eAED=0.09;_QI=377|1|1|1|0.87|0.77|9|286|839
chr5_3 exon 16909749 16910623 16909749 ID=Msa0802490-mRNA-1:exon:7092;Parent=Msa0802490-mRNA-1
chr5_3 exon 16910727 16910899 16910727 ID=Msa0802490-mRNA-1:exon:7091;Parent=Msa0802490-mRNA-1
chr5_3 exon 16911411 16911658 16911411 ID=Msa0802490-mRNA-1:exon:7090;Parent=Msa0802490-mRNA-1
chr5_3 exon 16911994 16912171 16911994 ID=Msa0802490-mRNA-1:exon:7089;Parent=Msa0802490-mRNA-1
chr5_3 exon 16912373 16912552 16912373 ID=Msa0802490-mRNA-1:exon:7088;Parent=Msa0802490-mRNA-1
chr5_3 exon 16912632 16912736 16912632 ID=Msa0802490-mRNA-1:exon:7087;Parent=Msa0802490-mRNA-1
chr5_3 exon 16912888 16913025 16912888 ID=Msa0802490-mRNA-1:exon:7086;Parent=Msa0802490-mRNA-1
chr5_3 exon 16913398 16914402 16913398 ID=Msa0802490-mRNA-1:exon:7085;Parent=Msa0802490-mRNA-1
chr5_3 exon 16915112 16915392 16915112 ID=Msa0802490-mRNA-1:exon:7084;Parent=Msa0802490-mRNA-1
chr5_3 five_prime_UTR 16915112 16915392 16915112 ID=Msa0802490-mRNA-1:five_prime_utr;Parent=Msa0802490-mRNA-1
chr5_3 five_prime_UTR 16914307 16914402 16914307 ID=Msa0802490-mRNA-1:five_prime_utr;Parent=Msa0802490-mRNA-1
chr5_3 CDS 16913398 16914306 16913398 ID=Msa0802490-mRNA-1:cds;Parent=Msa0802490-mRNA-1
chr5_3 CDS 16912888 16913025 16912888 ID=Msa0802490-mRNA-1:cds;Parent=Msa0802490-mRNA-1
chr5_3 CDS 16912632 16912736 16912632 ID=Msa0802490-mRNA-1:cds;Parent=Msa0802490-mRNA-1
chr5_3 CDS 16912373 16912552 16912373 ID=Msa0802490-mRNA-1:cds;Parent=Msa0802490-mRNA-1
chr5_3 CDS 16911994 16912171 16911994 ID=Msa0802490-mRNA-1:cds;Parent=Msa0802490-mRNA-1
chr5_3 CDS 16911411 16911658 16911411 ID=Msa0802490-mRNA-1:cds;Parent=Msa0802490-mRNA-1
chr5_3 CDS 16910727 16910899 16910727 ID=Msa0802490-mRNA-1:cds;Parent=Msa0802490-mRNA-1
chr5_3 CDS 16910035 16910623 16910035 ID=Msa0802490-mRNA-1:cds;Parent=Msa0802490-mRNA-1
chr5_3 three_prime_UTR 16909749 16910034 16909749 ID=Msa0802490-mRNA-1:three_prime_utr;Parent=Msa0802490-mRNA-1
Gene Sequence

>Msa0802490

ATGGATCATAATAGAGGAGATAATTGGAGGGAAGTGGTGAAGAAGATGCTTCCGCCGGGTGCTTCTGTTCCTGATGACGCTTCTAATCTTGATTACTCGACAGCTTCGGAATATTTAGGTCCACCGGTTTCTTATGAAGTACCGAAAGTTGAGCCTCTAGATGTGAAGTTCAGAGGAATTGAACGAATCCCTTTGCCGATGTCACGTATTTCCGGTGTGACGGGGTCTCCTAATCATAGTCCAAGGGTGTCTGGAAGTTCAGAATCTGTGGTTTCTGTGTTACTAAACCCGGATCTTTCTTCTGGTTCGCCTTCAGCTTCACCGGCTTCGGTTCATAATCCTTCGAATGTTGCTTCTAAGCCGGTGATTAATGAGGCGAAGAGGATGCCTGTTGTAACTTTTAATACCGTTGAAAGGACTCAGAGGAAAGAGGTGGTGGAGGTTGTGAAGCCGGCGTATCCAGAGTACGTTGGAGTTGTGAAAGAAAAGAAGAAAAAGAAAATAAGAGTTTGTTATAGGTGTGGTAAAGGGAAGTGGGAAACTAAAGAGTCTTGCATAGTTTGTAATGCAAAGTATTGCAGCAGCTGTGTGCTCAGGGCGATGGGATCAATGCCTGAAGGGCGCAAATGTGTAACATGCATCGGCCAGCCTATTGACGAATCCAAGCGTCTGAAATTAGGGAAATATTCGAGGGTGTTATCCCGACTGTTGAGTCCTCTGGAAGTTAAGCAAATTATGAAAGCGGAGAAAGAATGTTCGGCTAATCAGCTTCAGCCAGAGCAGTTGAGTGTCAACGGATTTCTCCTCAAACCTGATGAGATGGAAGACTTACTTGGATGTCCCTTACCTCCACGCAAGCTGAAGCCTGGTAGATATTGGTACGACAAAGAATCTGGTCTATGGGGAAAGGAAGGGGAAAAACCTGACAGAATCATTAGTTCAAACTTGAATTTCTCTGGGAAACTTAGCACTGATGCTAGTAACGGGAACACTGAGGTTTACATCAATGGTCGAGAGATTACAAAACTCGAATTGAGGGTACTCAGGTTGGCAAACGTGCAGTGTCCACGTGATACTCACTTTTGGGTTTATGATGATGGTCGTTACGAGGAGGAAGGTCAAAAGAATATAAGAGGAAACATTTGGGAGAAGGCATCGACAAGATTCGTTTCTGCCCTCTTCTCTCTACCCTATCCTCATGGACAGCCTCATGGATCAAGAGACGAGGCTAGTAATTATACCACAGTTCCTAAATATCTTGAACAGAAAAAAACTCAGAAGCTTCTTCTTCTTGGAATTCAAGGGTCTGGAACTAGCACCATGTTTAAGCAGGCCAAATTTTTGTACGGGAACAAATTTACTGATCAAGAGCTGGAGGATGTTAAACTGATGATACAGAGTAACATGTACAAATATCTTAGCATTTTACTTGATGGAAGAGAGCGTTTTGAAGAGGAGGCTGTTTCTAGAATGAATGGACAAGGTTCTCCTGCTCACATTATGGAAGCTGGTAGCAATGGTGAAGCTAGTAATACTAGTGAATGCATCTATTCTCTCAACCCAAGGCTGAAGCATTTTTCCGATTGGCTCCTGGACATTATAGCCACTGGGGATTTAGATGCATTCTTCCCTGCAGCGACACGTGAATATGCACCACTAGTCGAAGAAGTGTGGAAAGATCCAGCGATACAAGTGACCTTCAAAAGAAAAGATGAGCTTCACTTCCTTCCAGATGTTGCGGAGTACTTCTTAAGCCGGGCTGTTGAGATATCTAGCAACGACTATGAACCTTCTGAAAGGGACATACTATATGCAGAAGGGGTTACTCAGGGAAATGGTTTGGCTTTCATGGAATTCTCGCTCGATGAACGTAGCCCAAAGTTCGAAGCTTATACAGATAACCTTGATGCTCAGTTGCAACCAATGACCAAGTACCAACTCATAAGGGTGAATGCCAAGGGCATGAGCGAAGGTTGCAAGTGGGTTGAAATGTTTGAAGATGTTAGAGCAGTGGTCTTTTGCGTTTCCCTAAGCGACTACGATCAGTTATATCTTGCACCAGACAGCAATGGCAGCGGAACACTTCTCCAAAACAAGATGATTCAAAGCAAGGAGCTTTTCGAAACAATGGTGAGACACCCTTGTTTCAAAGACACTCCTTTAATACTAGTTCTTAACAAATACGACGTCTTCGAGGAAAAAATGAGAAGGATATCCCTCAACGCTTGTGAATGGTTCAACGATTTTTCTCCCGTTCGCGCACACGACAACAACCAATCACTAGCACATCAAGCTTACTTCTACGTCGCGATGAAATTCAAAGACCTTTATGCATCCATCACAGGAAAGAAACTTTTTGTTGCACAAGTTAGGGCAAGGGAAAGAATAACTGTTGATGAAGCATTCAAGTACATAAAAGAGGTTCTTAAATGGGATGAAGAGAAAGATGAAAATTACTATGGTCCACCTGAGGATTCAATTACAGATATGAGTTCATCTTTTTATGTTAGACAAGAGTAA
Protein sequence

>Msa0802490

MDHNRGDNWREVVKKMLPPGASVPDDASNLDYSTASEYLGPPVSYEVPKVEPLDVKFRGIERIPLPMSRISGVTGSPNHSPRVSGSSESVVSVLLNPDLSSGSPSASPASVHNPSNVASKPVINEAKRMPVVTFNTVERTQRKEVVEVVKPAYPEYVGVVKEKKKKKIRVCYRCGKGKWETKESCIVCNAKYCSSCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGKYSRVLSRLLSPLEVKQIMKAEKECSANQLQPEQLSVNGFLLKPDEMEDLLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFSGKLSTDASNGNTEVYINGREITKLELRVLRLANVQCPRDTHFWVYDDGRYEEEGQKNIRGNIWEKASTRFVSALFSLPYPHGQPHGSRDEASNYTTVPKYLEQKKTQKLLLLGIQGSGTSTMFKQAKFLYGNKFTDQELEDVKLMIQSNMYKYLSILLDGRERFEEEAVSRMNGQGSPAHIMEAGSNGEASNTSECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQVTFKRKDELHFLPDVAEYFLSRAVEISSNDYEPSERDILYAEGVTQGNGLAFMEFSLDERSPKFEAYTDNLDAQLQPMTKYQLIRVNAKGMSEGCKWVEMFEDVRAVVFCVSLSDYDQLYLAPDSNGSGTLLQNKMIQSKELFETMVRHPCFKDTPLILVLNKYDVFEEKMRRISLNACEWFNDFSPVRAHDNNQSLAHQAYFYVAMKFKDLYASITGKKLFVAQVRARERITVDEAFKYIKEVLKWDEEKDENYYGPPEDSITDMSSSFYVRQE*