Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931460 | XP_003612703.1 | 98.451 | 839 | 13 | 0 | 1 | 839 | 1 | 839 | 0.0 | 1723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931460 | sp|Q9C516|XLG3_ARATH | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026130 | Msa0931460 | 0.831039 | 2.091965e-55 | -8.615850e-47 |
| Msa0027230 | Msa0931460 | 0.802034 | 6.793340e-49 | -8.615850e-47 |
| Msa0027260 | Msa0931460 | 0.853807 | 1.871463e-61 | -8.615850e-47 |
| Msa0055190 | Msa0931460 | 0.801173 | 1.020048e-48 | -8.615850e-47 |
| Msa0056470 | Msa0931460 | 0.808991 | 2.359506e-50 | -8.615850e-47 |
| Msa0094470 | Msa0931460 | 0.820153 | 7.972998e-53 | -8.615850e-47 |
| Msa0100740 | Msa0931460 | 0.804408 | 2.191913e-49 | -8.615850e-47 |
| Msa0112790 | Msa0931460 | 0.812538 | 4.030603e-51 | -8.615850e-47 |
| Msa0661300 | Msa0931460 | 0.811909 | 5.529381e-51 | -8.615850e-47 |
| Msa0669520 | Msa0931460 | 0.817792 | 2.744214e-52 | -8.615850e-47 |
| Msa0719510 | Msa0931460 | 0.994958 | 1.012226e-211 | -8.615850e-47 |
| Msa0731500 | Msa0931460 | 0.804001 | 2.663671e-49 | -8.615850e-47 |
| Msa0784200 | Msa0931460 | 0.811072 | 8.404299e-51 | -8.615850e-47 |
| Msa0802490 | Msa0931460 | 0.931950 | 1.766720e-94 | -8.615850e-47 |
| Msa0818310 | Msa0931460 | 0.819889 | 9.163070e-53 | -8.615850e-47 |
| Msa0122970 | Msa0931460 | 0.805341 | 1.399119e-49 | -8.615850e-47 |
| Msa0128860 | Msa0931460 | 0.805621 | 1.221757e-49 | -8.615850e-47 |
| Msa0134610 | Msa0931460 | 0.833815 | 4.292627e-56 | -8.615850e-47 |
| Msa0140820 | Msa0931460 | 0.834974 | 2.197850e-56 | -8.615850e-47 |
| Msa0166590 | Msa0931460 | 0.827770 | 1.302399e-54 | -8.615850e-47 |
| Msa0174730 | Msa0931460 | 0.805542 | 1.269273e-49 | -8.615850e-47 |
| Msa0199880 | Msa0931460 | 0.812821 | 3.495103e-51 | -8.615850e-47 |
| Msa0231980 | Msa0931460 | 0.808714 | 2.704445e-50 | -8.615850e-47 |
| Msa0232050 | Msa0931460 | 0.800349 | 1.502899e-48 | -8.615850e-47 |
| Msa0369450 | Msa0931460 | 0.840009 | 1.125540e-57 | -8.615850e-47 |
| Msa0380300 | Msa0931460 | 0.809695 | 1.666490e-50 | -8.615850e-47 |
| Msa0475790 | Msa0931460 | 0.848922 | 4.501245e-60 | -8.615850e-47 |
| Msa0255090 | Msa0931460 | 0.807286 | 5.444660e-50 | -8.615850e-47 |
| Msa0259380 | Msa0931460 | 0.800614 | 1.327029e-48 | -8.615850e-47 |
| Msa0280610 | Msa0931460 | 0.824247 | 8.952254e-54 | -8.615850e-47 |
| Msa0294160 | Msa0931460 | 0.815430 | 9.281684e-52 | -8.615850e-47 |
| Msa0518390 | Msa0931460 | 0.809524 | 1.813853e-50 | -8.615850e-47 |
| Msa0524500 | Msa0931460 | 0.810377 | 1.187886e-50 | -8.615850e-47 |
| Msa0556060 | Msa0931460 | 0.822668 | 2.093871e-53 | -8.615850e-47 |
| Msa0581110 | Msa0931460 | 0.822883 | 1.866825e-53 | -8.615850e-47 |
| Msa0858770 | Msa0931460 | 0.821216 | 4.542162e-53 | -8.615850e-47 |
| Msa0902760 | Msa0931460 | 0.810624 | 1.050635e-50 | -8.615850e-47 |
| Msa0931460 | Msa0945110 | 0.830797 | 2.398672e-55 | -8.615850e-47 |
| Msa0931460 | Msa1004600 | 0.801920 | 7.169635e-49 | -8.615850e-47 |
| Msa0931460 | Msa1013400 | 0.813011 | 3.176199e-51 | -8.615850e-47 |
| Msa0931460 | Msa1019240 | 0.804290 | 2.318596e-49 | -8.615850e-47 |
| Msa0931460 | Msa1019260 | 0.829629 | 4.624385e-55 | -8.615850e-47 |
| Msa0931460 | Msa1034880 | 0.806917 | 6.517080e-50 | -8.615850e-47 |
| Msa0931460 | Msa1081150 | 0.803731 | 3.030737e-49 | -8.615850e-47 |
| Msa0931460 | Msa1081930 | 0.801313 | 9.550167e-49 | -8.615850e-47 |
| Msa0931460 | Msa1093530 | 0.810857 | 9.355276e-51 | -8.615850e-47 |
| Msa0931460 | Msa1093840 | 0.820830 | 5.575657e-53 | -8.615850e-47 |
| Msa0931460 | Msa1104140 | 0.808780 | 2.617073e-50 | -8.615850e-47 |
| Msa0931460 | Msa1104210 | 0.811122 | 8.199246e-51 | -8.615850e-47 |
| Msa0931460 | Msa1106700 | 0.810880 | 9.250325e-51 | -8.615850e-47 |
| Msa0931460 | Msa1115770 | 0.827313 | 1.676283e-54 | -8.615850e-47 |
| Msa0931460 | Msa1126510 | 0.835878 | 1.298576e-56 | -8.615850e-47 |
| Msa0931460 | Msa1126830 | 0.820569 | 6.400403e-53 | -8.615850e-47 |
| Msa0931460 | Msa1128600 | 0.825998 | 3.451447e-54 | -8.615850e-47 |
| Msa0931460 | Msa1165940 | 0.840792 | 7.023859e-58 | -8.615850e-47 |
| Msa0931460 | Msa1166330 | 0.825503 | 4.523017e-54 | -8.615850e-47 |
| Msa0931460 | Msa1166340 | 0.815390 | 9.474361e-52 | -8.615850e-47 |
| Msa0931460 | Msa1166860 | 0.823111 | 1.651738e-53 | -8.615850e-47 |
| Msa0931460 | Msa1218600 | 0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa0931460 | Msa1251160 | 0.823467 | 1.363887e-53 | -8.615850e-47 |
| Msa0931460 | Msa1379760 | 0.802987 | 4.321990e-49 | -8.615850e-47 |
| Msa0931460 | Msa1381350 | 0.809181 | 2.148271e-50 | -8.615850e-47 |
| Msa0931460 | Msa1394290 | 0.810933 | 9.009670e-51 | -8.615850e-47 |
| Msa0931460 | Msa1401860 | 0.805923 | 1.056032e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931460 | MtrunA17_Chr5g0410081 | 98.451 | 839 | 13 | 0 | 1 | 839 | 1 | 839 | 0.0 | 1723 |
| Msa0931460 | MtrunA17_Chr6g0479291 | 62.583 | 751 | 252 | 12 | 101 | 839 | 198 | 931 | 0.0 | 971 |
| Msa0931460 | MtrunA17_Chr5g0402991 | 52.475 | 707 | 309 | 11 | 125 | 815 | 192 | 887 | 0.0 | 721 |
| Msa0931460 | MtrunA17_Chr8g0374061 | 54.021 | 659 | 277 | 9 | 171 | 815 | 118 | 764 | 0.0 | 698 |
| Msa0931460 | MtrunA17_Chr1g0162561 | 48.851 | 653 | 311 | 8 | 171 | 813 | 209 | 848 | 0.0 | 608 |
| Msa0931460 | MtrunA17_Chr1g0151141 | 33.586 | 396 | 207 | 16 | 422 | 810 | 36 | 382 | 3.40e-50 | 181 |
| Msa0931460 | MtrunA17_Chr3g0136391 | 27.179 | 195 | 115 | 7 | 543 | 735 | 24 | 193 | 4.44e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931460 | AT1G31930.5 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0931460 | AT1G31930.2 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0931460 | AT1G31930.3 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0931460 | AT1G31930.6 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0931460 | AT1G31930.1 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0931460 | AT1G31930.4 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0931460 | AT2G23460.1 | 50.338 | 739 | 334 | 12 | 96 | 815 | 144 | 868 | 0.0 | 705 |
| Msa0931460 | AT4G34390.1 | 45.507 | 690 | 327 | 16 | 161 | 833 | 204 | 861 | 0.0 | 552 |
| Msa0931460 | AT4G34390.2 | 43.043 | 690 | 305 | 16 | 161 | 833 | 204 | 822 | 1.56e-166 | 504 |
| Msa0931460 | AT2G26300.2 | 31.159 | 414 | 218 | 14 | 408 | 810 | 16 | 373 | 1.12e-51 | 186 |
| Msa0931460 | AT2G26300.1 | 31.159 | 414 | 218 | 14 | 408 | 810 | 16 | 373 | 1.12e-51 | 186 |
Find 238 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATCGAAGCGTCTGAAAT+TGG | 0.149417 | 6_2:-80925402 | Msa0931460:CDS |
| ACTCAGAAGCTTCTTCTTCT+TGG | 0.179208 | 6_2:-80924186 | Msa0931460:CDS |
| TGCTTTGAATCATCTTGTTT+TGG | 0.199485 | 6_2:+80922220 | None:intergenic |
| AGAAAATAAGAGTTTGTTAT+AGG | 0.213096 | 6_2:-80925562 | Msa0931460:CDS |
| TTGTTAAGAACTAGTATTAA+AGG | 0.230147 | 6_2:+80922150 | None:intergenic |
| TTGCCGATGTCTCGTATTTC+CGG | 0.238304 | 6_2:-80925866 | Msa0931460:CDS |
| CAACCTCTTAATAGCAAAAT+AGG | 0.249379 | 6_2:+80921760 | None:intergenic |
| ACAAAGATATGGATCATAAT+AGG | 0.252815 | 6_2:-80926066 | Msa0931460:exon |
| ACATAAAAGAGGTTCTTAAA+TGG | 0.262325 | 6_2:-80921897 | Msa0931460:CDS |
| TCAACAGCTTCGGAATATTT+AGG | 0.273946 | 6_2:-80925962 | Msa0931460:CDS |
| AGACGCTTCGATTCGTCAAT+AGG | 0.283648 | 6_2:+80925410 | None:intergenic |
| GGGAAATGGTTTGGCTTTCA+TGG | 0.284339 | 6_2:-80922581 | Msa0931460:CDS |
| AGTTCAAACTTGAATTTCTC+TGG | 0.305993 | 6_2:-80924752 | Msa0931460:CDS |
| GAGAGTGTACCTTACATAAA+AGG | 0.307610 | 6_2:+80926871 | None:intergenic |
| GAATCGAAGCGTCTGAAATT+GGG | 0.309669 | 6_2:-80925401 | Msa0931460:CDS |
| CTGTATAAGCTTCGAACTTT+GGG | 0.314678 | 6_2:+80922536 | None:intergenic |
| CTAAACCCGGATCTTTCTTC+TGG | 0.316664 | 6_2:-80925776 | Msa0931460:CDS |
| AGGTTCTCCTGCTCACATTA+TGG | 0.317177 | 6_2:-80923776 | Msa0931460:CDS |
| GTCCACGTGATACTCACTTT+TGG | 0.317550 | 6_2:-80924474 | Msa0931460:CDS |
| CTTCTTCTTCTTGGAATTCA+AGG | 0.319947 | 6_2:-80924177 | Msa0931460:CDS |
| CTTCTTGGAATTCAAGGGTC+TGG | 0.324531 | 6_2:-80924171 | Msa0931460:CDS |
| ACGACAAAGAATCTGGTCTA+TGG | 0.324545 | 6_2:-80925178 | Msa0931460:CDS |
| GCCTTCAGCTTCACCGGCTT+CGG | 0.330535 | 6_2:-80925750 | Msa0931460:CDS |
| CAAAGATATGGATCATAATA+GGG | 0.331376 | 6_2:-80926065 | Msa0931460:exon |
| AGAATATAAGAGGAAACATT+TGG | 0.337123 | 6_2:-80924414 | Msa0931460:CDS |
| CAATATGCTTACTTGGTCAT+TGG | 0.347638 | 6_2:+80922490 | None:intergenic |
| GGTTGTGAAGCCGGCGTATC+CGG | 0.350381 | 6_2:-80925618 | Msa0931460:CDS |
| GTTACACATTTGCGCCCTTC+AGG | 0.359236 | 6_2:+80925446 | None:intergenic |
| GAATCTGATCTTTAAATCTA+AGG | 0.368350 | 6_2:+80926896 | None:intergenic |
| TCTGTATAAGCTTCGAACTT+TGG | 0.372490 | 6_2:+80922535 | None:intergenic |
| TCTCGTATTTCCGGTGTGAC+GGG | 0.380690 | 6_2:-80925857 | Msa0931460:CDS |
| ACCCACTACACATTTGATAA+AGG | 0.389361 | 6_2:+80926967 | None:intergenic |
| ATCATAATAGGGGAGATAAT+TGG | 0.389586 | 6_2:-80926054 | Msa0931460:CDS |
| ATTATTAACATCTTAACAAT+GGG | 0.389953 | 6_2:-80927096 | Msa0931460:five_prime_UTR |
| ACATCTAGAGGCTCAACTTT+CGG | 0.391126 | 6_2:+80925917 | None:intergenic |
| ATAACTGATCGTAGTCGCTT+AGG | 0.393112 | 6_2:+80922280 | None:intergenic |
| AAGAAGTACTCCGCAACATC+TGG | 0.402272 | 6_2:+80923194 | None:intergenic |
| TTTGTTATAGGTGTGGTAAA+GGG | 0.404012 | 6_2:-80925550 | Msa0931460:CDS |
| AGCTGAAGCCTGGTAGATAT+TGG | 0.404152 | 6_2:-80925202 | Msa0931460:CDS |
| GAGAAAGATGAAAATTACTA+TGG | 0.405466 | 6_2:-80921868 | Msa0931460:CDS |
| AATCATAGTCCAAGGGTGTC+TGG | 0.406251 | 6_2:-80925827 | Msa0931460:CDS |
| AGCTGTGTGCTCAGGGCAAT+GGG | 0.407300 | 6_2:-80925476 | Msa0931460:CDS |
| GGTTACTCAGGGAAATGGTT+TGG | 0.408020 | 6_2:-80922590 | Msa0931460:CDS |
| GCATATTCACGTGTCGCTGC+AGG | 0.408474 | 6_2:+80923293 | None:intergenic |
| CAGCTGTGTGCTCAGGGCAA+TGG | 0.408957 | 6_2:-80925477 | Msa0931460:CDS |
| ATCTCAGGTACCAACTCATA+AGG | 0.412874 | 6_2:-80922383 | Msa0931460:intron |
| TTCCTGTGATGGATGCATAA+AGG | 0.425207 | 6_2:+80921983 | None:intergenic |
| ATTGCAGCAGCTGTGTGCTC+AGG | 0.426052 | 6_2:-80925484 | Msa0931460:CDS |
| CTTCAGCTTGCGTGGAGGTA+AGG | 0.430576 | 6_2:+80925217 | None:intergenic |
| CTCCTGGACATTATAGCCAC+TGG | 0.433165 | 6_2:-80923335 | Msa0931460:CDS |
| CATAAAAGAGGTTCTTAAAT+GGG | 0.433650 | 6_2:-80921896 | Msa0931460:CDS |
| TTGTTGTCGTGTGCGCGAAC+GGG | 0.436899 | 6_2:+80922057 | None:intergenic |
| GAAGGTCAAAAGAATATAAG+AGG | 0.437475 | 6_2:-80924424 | Msa0931460:CDS |
| TCTGTGGAAGCACTGTTCAT+TGG | 0.437812 | 6_2:-80921610 | Msa0931460:three_prime_UTR |
| TATTGGTACGACAAAGAATC+TGG | 0.439746 | 6_2:-80925185 | Msa0931460:CDS |
| GTCTCGTATTTCCGGTGTGA+CGG | 0.440450 | 6_2:-80925858 | Msa0931460:CDS |
| GAATATAAGAGGAAACATTT+GGG | 0.444612 | 6_2:-80924413 | Msa0931460:CDS |
| GTTCCGCTGCCATTGCTGTC+TGG | 0.451485 | 6_2:+80922249 | None:intergenic |
| TAACAAATACGACGTCTTCG+AGG | 0.451533 | 6_2:-80922133 | Msa0931460:CDS |
| TTGAAGGTCACTTGTATCGC+TGG | 0.452762 | 6_2:+80923242 | None:intergenic |
| TGTTGGTGATTACAAAGATA+TGG | 0.455106 | 6_2:-80926077 | Msa0931460:exon |
| GAAGGGGTTACTCAGGGAAA+TGG | 0.456344 | 6_2:-80922595 | Msa0931460:CDS |
| GTTTGTTATAGGTGTGGTAA+AGG | 0.458659 | 6_2:-80925551 | Msa0931460:CDS |
| ACGGTATTAAAAGTTACAAC+AGG | 0.462099 | 6_2:+80925671 | None:intergenic |
| GGTGGTGGAGGTTGTGAAGC+CGG | 0.462707 | 6_2:-80925627 | Msa0931460:CDS |
| TTTGAACTAATGATTCTGTC+AGG | 0.463062 | 6_2:+80924767 | None:intergenic |
| TTCGGTACTTCATAAGAAAC+CGG | 0.463768 | 6_2:+80925935 | None:intergenic |
| TAACTGATCGTAGTCGCTTA+GGG | 0.465956 | 6_2:+80922281 | None:intergenic |
| AACTCGAATTGAGGGTACTC+AGG | 0.466428 | 6_2:-80924664 | Msa0931460:CDS |
| GCAACCTTCGCTCATGCCCT+TGG | 0.468837 | 6_2:+80922353 | None:intergenic |
| GTTGTTGTCGTGTGCGCGAA+CGG | 0.469425 | 6_2:+80922056 | None:intergenic |
| CGCAAATGTGTAACATGCAT+TGG | 0.473345 | 6_2:-80925437 | Msa0931460:CDS |
| TTCACGACTCCAACGTACTC+CGG | 0.475231 | 6_2:+80925599 | None:intergenic |
| TGGCATTCACCCTTATGAGT+TGG | 0.476657 | 6_2:+80922373 | None:intergenic |
| GTTCAAACTTGAATTTCTCT+GGG | 0.480058 | 6_2:-80924751 | Msa0931460:CDS |
| AGTAAGTCTTCCATCTCATC+AGG | 0.480096 | 6_2:+80925248 | None:intergenic |
| TCTGAACTTCCAGACACCCT+TGG | 0.482123 | 6_2:+80925818 | None:intergenic |
| TCCTTTATCAAATGTGTAGT+GGG | 0.486978 | 6_2:-80926968 | Msa0931460:five_prime_UTR |
| CGACAAAGAATCTGGTCTAT+GGG | 0.487042 | 6_2:-80925177 | Msa0931460:CDS |
| GGCGAACCAGAAGAAAGATC+CGG | 0.487194 | 6_2:+80925770 | None:intergenic |
| GACACCCTTGGACTATGATT+AGG | 0.488171 | 6_2:+80925830 | None:intergenic |
| TTCTCTCTACCCTATCCTCA+TGG | 0.490716 | 6_2:-80924279 | Msa0931460:CDS |
| GGGAGATAATTGGAGGGAAG+TGG | 0.490835 | 6_2:-80926044 | Msa0931460:CDS |
| GACTCAGAGGAAAGAGGTGG+TGG | 0.491543 | 6_2:-80925642 | Msa0931460:CDS |
| AAGCTTGATGTGCTAGTGAT+TGG | 0.491832 | 6_2:+80922034 | None:intergenic |
| TCCTGGACATTATAGCCACT+GGG | 0.495286 | 6_2:-80923334 | Msa0931460:CDS |
| TTTAACAATTTGAAACATTG+AGG | 0.496872 | 6_2:-80926111 | Msa0931460:five_prime_UTR |
| GAGGCTGTTTCTAGAATGAA+TGG | 0.497615 | 6_2:-80923802 | Msa0931460:CDS |
| AACACTGAGGTTTACATCAA+TGG | 0.499687 | 6_2:-80924701 | Msa0931460:CDS |
| TTCGGAATATTTAGGTCCAC+CGG | 0.500662 | 6_2:-80925954 | Msa0931460:CDS |
| GAACCATTCACAAGCGTTGA+GGG | 0.500930 | 6_2:+80922092 | None:intergenic |
| GATTATTAACATCTTAACAA+TGG | 0.501873 | 6_2:-80927097 | Msa0931460:five_prime_UTR |
| ATAATTTGCTTAACTTCTAG+AGG | 0.502073 | 6_2:+80925344 | None:intergenic |
| TTGCGGAGTACTTCTTAAGC+CGG | 0.502186 | 6_2:-80923187 | Msa0931460:CDS |
| TTCCTTTATCAAATGTGTAG+TGG | 0.502436 | 6_2:-80926969 | Msa0931460:five_prime_UTR |
| ATCTGCATGTTTGCATTCTG+TGG | 0.504877 | 6_2:-80921626 | Msa0931460:three_prime_UTR |
| ATATGCAGAAGGGGTTACTC+AGG | 0.507616 | 6_2:-80922602 | Msa0931460:CDS |
| GAAAGCGGAGAAAGAATGTT+CGG | 0.508911 | 6_2:-80925321 | Msa0931460:CDS |
| CCGTTGACACTCAACTGCTC+TGG | 0.510346 | 6_2:+80925284 | None:intergenic |
| TTCAGCTTGCGTGGAGGTAA+GGG | 0.513690 | 6_2:+80925218 | None:intergenic |
| TTCGAATGTTGCTTCTAAGC+CGG | 0.514313 | 6_2:-80925717 | Msa0931460:CDS |
| TTCTTCTTCTTGGAATTCAA+GGG | 0.514846 | 6_2:-80924176 | Msa0931460:CDS |
| GACCTTTATGCATCCATCAC+AGG | 0.514967 | 6_2:-80921985 | Msa0931460:CDS |
| ATGAGGCTGTCCATGAGGAT+AGG | 0.516805 | 6_2:+80924269 | None:intergenic |
| CCTGCTCACATTATGGAAGC+TGG | 0.518201 | 6_2:-80923769 | Msa0931460:intron |
| CTTCTAGAGGACTCAACAGT+CGG | 0.518703 | 6_2:+80925357 | None:intergenic |
| TCACTTCCTTCCAGATGTTG+CGG | 0.521515 | 6_2:-80923204 | Msa0931460:CDS |
| TGGTTCGCCTTCAGCTTCAC+CGG | 0.523608 | 6_2:-80925756 | Msa0931460:CDS |
| TATCCCTCAACGCTTGTGAA+TGG | 0.523776 | 6_2:-80922095 | Msa0931460:CDS |
| ATATCTGTAATTGAATCCTC+AGG | 0.524085 | 6_2:+80921841 | None:intergenic |
| CCTCCACGCAAGCTGAAGCC+TGG | 0.524656 | 6_2:-80925212 | Msa0931460:CDS |
| TTAGCACTGATGCTAGTAAC+GGG | 0.524938 | 6_2:-80924724 | Msa0931460:CDS |
| AATCGAAGCGTCTGAAATTG+GGG | 0.525822 | 6_2:-80925400 | Msa0931460:CDS |
| GAAGGATTATGAACCGAAGC+CGG | 0.527127 | 6_2:+80925737 | None:intergenic |
| CTCTTCGCCTCATTAATCAC+CGG | 0.527445 | 6_2:+80925698 | None:intergenic |
| TCTCAGGTACCAACTCATAA+GGG | 0.529434 | 6_2:-80922382 | Msa0931460:intron |
| CCCCAGTGGCTATAATGTCC+AGG | 0.529739 | 6_2:+80923333 | None:intergenic |
| GTCTGGAAGTTCAGAATCTG+TGG | 0.530261 | 6_2:-80925810 | Msa0931460:CDS |
| ATAGGTGTGGTAAAGGGAAG+TGG | 0.530493 | 6_2:-80925544 | Msa0931460:CDS |
| GATGAGATGGAAGACTTACT+TGG | 0.532781 | 6_2:-80925245 | Msa0931460:CDS |
| TCAAGATTAGAAGCGTCGTC+AGG | 0.533871 | 6_2:+80925989 | None:intergenic |
| TTCCACACTTCTTCGACTAG+TGG | 0.534470 | 6_2:+80923269 | None:intergenic |
| AAATACGAGACATCGGCAAA+GGG | 0.534604 | 6_2:+80925870 | None:intergenic |
| CGACTATGAACCTTCTGAAA+GGG | 0.535573 | 6_2:-80922632 | Msa0931460:CDS |
| TCTCCTCAAGCCTGATGAGA+TGG | 0.535683 | 6_2:-80925258 | Msa0931460:CDS |
| TGAGGCTGTCCATGAGGATA+GGG | 0.536471 | 6_2:+80924270 | None:intergenic |
| AATCTTTATTCAGGTAGCAA+TGG | 0.537742 | 6_2:-80923425 | Msa0931460:intron |
| TTGTTGCACAAGTTAGGGCA+AGG | 0.539883 | 6_2:-80921951 | Msa0931460:CDS |
| ACTATGGTAATAATTGGGAA+AGG | 0.540417 | 6_2:-80921547 | Msa0931460:three_prime_UTR |
| AGCATTCAAGTACATAAAAG+AGG | 0.541232 | 6_2:-80921908 | Msa0931460:CDS |
| CAAATTTACTGATCAAGAGC+TGG | 0.541738 | 6_2:-80923905 | Msa0931460:CDS |
| AGGATAGGGTAGAGAGAAGA+GGG | 0.541964 | 6_2:+80924284 | None:intergenic |
| TATAATGTCCAGGAGCCAAT+CGG | 0.542069 | 6_2:+80923343 | None:intergenic |
| GATTACAAAACTCGAATTGA+GGG | 0.543174 | 6_2:-80924672 | Msa0931460:CDS |
| TAGTGACATGGGTCCCACTT+AGG | 0.545980 | 6_2:+80927071 | None:intergenic |
| TCTTGACTACTCAACAGCTT+CGG | 0.546361 | 6_2:-80925972 | Msa0931460:CDS |
| TATCCTCATGGACAGCCTCA+TGG | 0.548421 | 6_2:-80924267 | Msa0931460:CDS |
| AACTAGCACCATGTTTAAGC+AGG | 0.548505 | 6_2:-80924148 | Msa0931460:intron |
| CCAGCTTCCATAATGTGAGC+AGG | 0.550063 | 6_2:+80923769 | None:intergenic |
| AAACAAGATGATTCAAAGCA+AGG | 0.551964 | 6_2:-80922217 | Msa0931460:CDS |
| TTGTCGTACCAATATCTACC+AGG | 0.553776 | 6_2:+80925194 | None:intergenic |
| TTCTAAGCCGGTGATTAATG+AGG | 0.555132 | 6_2:-80925705 | Msa0931460:CDS |
| CTCGTATTTCCGGTGTGACG+GGG | 0.555222 | 6_2:-80925856 | Msa0931460:CDS |
| AAGAGGAAACATTTGGGAGA+AGG | 0.555224 | 6_2:-80924407 | Msa0931460:intron |
| CTACCAGGCTTCAGCTTGCG+TGG | 0.558966 | 6_2:+80925209 | None:intergenic |
| TTGCAGCAGCTGTGTGCTCA+GGG | 0.559361 | 6_2:-80925483 | Msa0931460:CDS |
| TGCGGAGTACTTCTTAAGCC+GGG | 0.559400 | 6_2:-80923186 | Msa0931460:intron |
| CCAGAGCAGTTGAGTGTCAA+CGG | 0.559543 | 6_2:-80925284 | Msa0931460:CDS |
| GGTCTCCTAATCATAGTCCA+AGG | 0.562082 | 6_2:-80925835 | Msa0931460:CDS |
| CAATGGGATCAATGCCTGAA+GGG | 0.562138 | 6_2:-80925460 | Msa0931460:CDS |
| CTTCCATCTCATCAGGCTTG+AGG | 0.562379 | 6_2:+80925255 | None:intergenic |
| TTCTAGAGGACTCAACAGTC+GGG | 0.562838 | 6_2:+80925358 | None:intergenic |
| GTGAAGAAGATGCTTCCGCC+GGG | 0.565713 | 6_2:-80926022 | Msa0931460:CDS |
| TTGGTTGCAACTGAGCATCA+AGG | 0.566584 | 6_2:+80922509 | None:intergenic |
| AAAGGAGTGTCTTTGAAACA+AGG | 0.567459 | 6_2:+80922168 | None:intergenic |
| ATAAGAGTTTGTTATAGGTG+TGG | 0.569468 | 6_2:-80925557 | Msa0931460:CDS |
| GAAATACGAGACATCGGCAA+AGG | 0.569787 | 6_2:+80925869 | None:intergenic |
| GCTTCGATTCGTCAATAGGC+TGG | 0.569875 | 6_2:+80925414 | None:intergenic |
| TAGGTGTGGTAAAGGGAAGT+GGG | 0.572746 | 6_2:-80925543 | Msa0931460:CDS |
| TGAAATTGGGGAAATATTCG+AGG | 0.573393 | 6_2:-80925388 | Msa0931460:CDS |
| TCAGAGGAAAGAGGTGGTGG+AGG | 0.574303 | 6_2:-80925639 | Msa0931460:CDS |
| ACTCATAAGGGTGAATGCCA+AGG | 0.574599 | 6_2:-80922370 | Msa0931460:CDS |
| AGATTACAAAACTCGAATTG+AGG | 0.575057 | 6_2:-80924673 | Msa0931460:CDS |
| GGTGAAGAAGATGCTTCCGC+CGG | 0.575635 | 6_2:-80926023 | Msa0931460:CDS |
| GGTTTCTGTGTTACTAAACC+CGG | 0.577540 | 6_2:-80925789 | Msa0931460:CDS |
| TTAGAGAAGAAGCACAACAT+AGG | 0.578368 | 6_2:-80927138 | None:intergenic |
| GCGAACCAGAAGAAAGATCC+GGG | 0.578672 | 6_2:+80925771 | None:intergenic |
| TGAACCATTCACAAGCGTTG+AGG | 0.581430 | 6_2:+80922091 | None:intergenic |
| TATAGTATGTCCCTTTCAGA+AGG | 0.581848 | 6_2:+80922622 | None:intergenic |
| TGTTGCACAAGTTAGGGCAA+GGG | 0.583819 | 6_2:-80921950 | Msa0931460:CDS |
| ACTCGAATTGAGGGTACTCA+GGG | 0.588057 | 6_2:-80924663 | Msa0931460:intron |
| ATAATAGGGGAGATAATTGG+AGG | 0.588667 | 6_2:-80926051 | Msa0931460:CDS |
| TTCAAGATATTTAGGAACTG+TGG | 0.591645 | 6_2:+80924218 | None:intergenic |
| AGAATCTGGTCTATGGGGAA+AGG | 0.592126 | 6_2:-80925171 | Msa0931460:intron |
| GCTCTGAATTTCACATCTAG+AGG | 0.592367 | 6_2:+80925905 | None:intergenic |
| GGCTTAGAAGCAACATTCGA+AGG | 0.592724 | 6_2:+80925719 | None:intergenic |
| GTGTAATAGTAGTAGTGACA+TGG | 0.593722 | 6_2:+80927059 | None:intergenic |
| CATATTCACGTGTCGCTGCA+GGG | 0.596003 | 6_2:+80923294 | None:intergenic |
| AGTTAAGCAAATTATGAAAG+CGG | 0.598451 | 6_2:-80925336 | Msa0931460:CDS |
| GAGGATAGGGTAGAGAGAAG+AGG | 0.598813 | 6_2:+80924283 | None:intergenic |
| TGAAAGGACTCAGAGGAAAG+AGG | 0.599318 | 6_2:-80925648 | Msa0931460:CDS |
| CACCACTAGTCGAAGAAGTG+TGG | 0.599546 | 6_2:-80923271 | Msa0931460:CDS |
| AAGGAGTGTCTTTGAAACAA+GGG | 0.599710 | 6_2:+80922169 | None:intergenic |
| CTTAGCACTGATGCTAGTAA+CGG | 0.601560 | 6_2:-80924725 | Msa0931460:CDS |
| ACGACTATGAACCTTCTGAA+AGG | 0.605948 | 6_2:-80922633 | Msa0931460:CDS |
| GTTTGAAGATGTTAGAGCAG+TGG | 0.606106 | 6_2:-80922316 | Msa0931460:CDS |
| GCATGAGCGAAGGTTGCAAG+TGG | 0.608881 | 6_2:-80922347 | Msa0931460:CDS |
| TCTGATCTTTAAATCTAAGG+TGG | 0.609023 | 6_2:+80926899 | None:intergenic |
| AAAGATATGGATCATAATAG+GGG | 0.609084 | 6_2:-80926064 | Msa0931460:exon |
| CTCATAAGGGTGAATGCCAA+GGG | 0.609756 | 6_2:-80922369 | Msa0931460:CDS |
| GCATCTATTCTCTCAACCCA+AGG | 0.609797 | 6_2:-80923379 | Msa0931460:CDS |
| AAGCCATACCTGCTTAAACA+TGG | 0.609945 | 6_2:+80924140 | None:intergenic |
| AATGCCAAGGGCATGAGCGA+AGG | 0.610410 | 6_2:-80922357 | Msa0931460:CDS |
| TTTCCTCTGAGTCCTTTCAA+CGG | 0.611134 | 6_2:+80925652 | None:intergenic |
| GGGACATACTATATGCAGAA+GGG | 0.611389 | 6_2:-80922612 | Msa0931460:CDS |
| ACCGAAGCCGGTGAAGCTGA+AGG | 0.614449 | 6_2:+80925749 | None:intergenic |
| GCAATGGGATCAATGCCTGA+AGG | 0.617810 | 6_2:-80925461 | Msa0931460:CDS |
| GGACATACTATATGCAGAAG+GGG | 0.618757 | 6_2:-80922611 | Msa0931460:CDS |
| GTCTCCTAATCATAGTCCAA+GGG | 0.620517 | 6_2:-80925834 | Msa0931460:CDS |
| ATGGTAATAATTGGGAAAGG+AGG | 0.623968 | 6_2:-80921544 | Msa0931460:three_prime_UTR |
| TATTAACATCTTAACAATGG+GGG | 0.629113 | 6_2:-80927094 | Msa0931460:five_prime_UTR |
| AGTACTCCGCAACATCTGGA+AGG | 0.629530 | 6_2:+80923198 | None:intergenic |
| GCACCAGACAGCAATGGCAG+CGG | 0.631434 | 6_2:-80922252 | Msa0931460:CDS |
| TGTAATAGTAGTAGTGACAT+GGG | 0.635871 | 6_2:+80927060 | None:intergenic |
| AGGGACATACTATATGCAGA+AGG | 0.636022 | 6_2:-80922613 | Msa0931460:CDS |
| GACAAAGAATCTGGTCTATG+GGG | 0.638895 | 6_2:-80925176 | Msa0931460:CDS |
| ATTTACTGATCAAGAGCTGG+AGG | 0.639867 | 6_2:-80923902 | Msa0931460:CDS |
| TTATGATGATGGTCGTTACG+AGG | 0.640902 | 6_2:-80924449 | Msa0931460:CDS |
| GTTTCTAGAATGAATGGACA+AGG | 0.641804 | 6_2:-80923796 | Msa0931460:CDS |
| TATCTTGCACCAGACAGCAA+TGG | 0.641825 | 6_2:-80922258 | Msa0931460:CDS |
| GATGGTCGTTACGAGGAGGA+AGG | 0.643902 | 6_2:-80924442 | Msa0931460:CDS |
| TCTGTAATTGAATCCTCAGG+TGG | 0.650948 | 6_2:+80921844 | None:intergenic |
| CGGTGATTAATGAGGCGAAG+AGG | 0.653038 | 6_2:-80925697 | Msa0931460:CDS |
| TCGTCAGGAACAGAAGCACC+CGG | 0.654089 | 6_2:+80926004 | None:intergenic |
| TAATAGGGGAGATAATTGGA+GGG | 0.655104 | 6_2:-80926050 | Msa0931460:CDS |
| TGATGATGGTCGTTACGAGG+AGG | 0.655963 | 6_2:-80924446 | Msa0931460:CDS |
| ATTAGGAGACCCCGTCACAC+CGG | 0.657996 | 6_2:+80925847 | None:intergenic |
| CCGGCGTATCCGGAGTACGT+TGG | 0.658309 | 6_2:-80925608 | Msa0931460:CDS |
| TATGCAGAAGGGGTTACTCA+GGG | 0.660136 | 6_2:-80922601 | Msa0931460:CDS |
| CCAGGCTTCAGCTTGCGTGG+AGG | 0.664286 | 6_2:+80925212 | None:intergenic |
| GGTACTTCATAAGAAACCGG+TGG | 0.665395 | 6_2:+80925938 | None:intergenic |
| GAAATTGGGGAAATATTCGA+GGG | 0.668473 | 6_2:-80925387 | Msa0931460:CDS |
| GATCCATGAGGCTGTCCATG+AGG | 0.673737 | 6_2:+80924264 | None:intergenic |
| GCCTCGTCTCTTGATCCATG+AGG | 0.673748 | 6_2:+80924252 | None:intergenic |
| CATGAGCGAAGGTTGCAAGT+GGG | 0.675143 | 6_2:-80922346 | Msa0931460:CDS |
| CCAACGTACTCCGGATACGC+CGG | 0.683136 | 6_2:+80925608 | None:intergenic |
| ACCCAAAAGTGAGTATCACG+TGG | 0.685386 | 6_2:+80924472 | None:intergenic |
| AACATGCAGATACACGACAA+AGG | 0.688596 | 6_2:+80921638 | None:intergenic |
| TTATTAACATCTTAACAATG+GGG | 0.697625 | 6_2:-80927095 | Msa0931460:five_prime_UTR |
| ACACCGGAAATACGAGACAT+CGG | 0.699999 | 6_2:+80925863 | None:intergenic |
| GCCTCATGGATCAAGAGACG+AGG | 0.704715 | 6_2:-80924253 | Msa0931460:CDS |
| AAATTACTATGGTCCACCTG+AGG | 0.707677 | 6_2:-80921857 | Msa0931460:CDS |
| AAGGACTCAGAGGAAAGAGG+TGG | 0.708006 | 6_2:-80925645 | Msa0931460:CDS |
| ATACCGTTGAAAGGACTCAG+AGG | 0.712232 | 6_2:-80925655 | Msa0931460:CDS |
| CCTGGACATTATAGCCACTG+GGG | 0.716191 | 6_2:-80923333 | Msa0931460:CDS |
| TGCTAGTAACGGGAACACTG+AGG | 0.725800 | 6_2:-80924714 | Msa0931460:CDS |
| GAATGCATCTAAATCCCCAG+TGG | 0.756546 | 6_2:+80923319 | None:intergenic |
| TCAGGAACAGAAGCACCCGG+CGG | 0.801290 | 6_2:+80926007 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATATTATCTTTTTCTT+TGG | - | chr6_2:80921848-80921867 | Msa0931460:CDS | 10.0% |
| !! | ATTATTAACATCTTAACAAT+GGG | - | chr6_2:80921555-80921574 | Msa0931460:three_prime_UTR | 15.0% |
| !!! | GTTTCTTAATTAATTTTCAT+AGG | - | chr6_2:80921909-80921928 | Msa0931460:CDS | 15.0% |
| !! | TATTAATTAAACAAAGTAGT+TGG | - | chr6_2:80921936-80921955 | Msa0931460:CDS | 15.0% |
| !! | TGTTAATACTATAATTCAAA+AGG | - | chr6_2:80922016-80922035 | Msa0931460:CDS | 15.0% |
| !! | AATAAACAAAATTCAAATCA+AGG | + | chr6_2:80922164-80922183 | None:intergenic | 15.0% |
| !!! | AGTCAATTTTTATATGATTT+TGG | - | chr6_2:80922185-80922204 | Msa0931460:CDS | 15.0% |
| !! | ATCAATGTTAAATATATTCA+AGG | + | chr6_2:80922399-80922418 | None:intergenic | 15.0% |
| !!! | TTATTTAGTTACCATTTTTT+TGG | - | chr6_2:80922465-80922484 | Msa0931460:intron | 15.0% |
| !!! | ATTTTTTTGGATATTTTAGA+GGG | - | chr6_2:80922478-80922497 | Msa0931460:intron | 15.0% |
| !! | ATTGTTAATATGTACTTAAT+GGG | + | chr6_2:80926237-80926256 | None:intergenic | 15.0% |
| !! | TATTGTTAATATGTACTTAA+TGG | + | chr6_2:80926238-80926257 | None:intergenic | 15.0% |
| !! | GATTATTAACATCTTAACAA+TGG | - | chr6_2:80921554-80921573 | Msa0931460:three_prime_UTR | 20.0% |
| !! | TTATTAACATCTTAACAATG+GGG | - | chr6_2:80921556-80921575 | Msa0931460:three_prime_UTR | 20.0% |
| !!! | CTTAATTAATTTTCATAGGA+TGG | - | chr6_2:80921913-80921932 | Msa0931460:CDS | 20.0% |
| !!! | TTACTATATAAAGTGGTTTT+AGG | + | chr6_2:80922358-80922377 | None:intergenic | 20.0% |
| !!! | AATTGTGTTACTATATAAAG+TGG | + | chr6_2:80922365-80922384 | None:intergenic | 20.0% |
| !! | AAATATATTCAAGGAAAAAG+AGG | + | chr6_2:80922390-80922409 | None:intergenic | 20.0% |
| !!! | CTCTAAAATATCCAAAAAAA+TGG | + | chr6_2:80922479-80922498 | None:intergenic | 20.0% |
| !!! | CATTTTTTTGGATATTTTAG+AGG | - | chr6_2:80922477-80922496 | Msa0931460:intron | 20.0% |
| !!! | TTTAACAATTTGAAACATTG+AGG | - | chr6_2:80922540-80922559 | Msa0931460:CDS | 20.0% |
| !!! | AGAAAATAAGAGTTTGTTAT+AGG | - | chr6_2:80923089-80923108 | Msa0931460:intron | 20.0% |
| !!! | TATGATTTTGGAGATAAAAT+TGG | + | chr6_2:80923599-80923618 | None:intergenic | 20.0% |
| !!! | ATAAGTCAAACTTATGATTT+TGG | + | chr6_2:80923611-80923630 | None:intergenic | 20.0% |
| !!! | TTTGCCACTATTTTAATATT+CGG | - | chr6_2:80924067-80924086 | Msa0931460:intron | 20.0% |
| !! | TAATCCGAATATTAAAATAG+TGG | + | chr6_2:80924074-80924093 | None:intergenic | 20.0% |
| !! | TCCTTATCATTATCATATTT+CGG | - | chr6_2:80924094-80924113 | Msa0931460:intron | 20.0% |
| !! | AACTGAAAATTCAAAGAAAA+AGG | + | chr6_2:80924143-80924162 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTGAATTTTCAGT+TGG | - | chr6_2:80924142-80924161 | Msa0931460:intron | 20.0% |
| !!! | TTTTTCTGTTCAAGATATTT+AGG | + | chr6_2:80924444-80924463 | None:intergenic | 20.0% |
| !! | TTAATGTTCAGAATGAATAA+TGG | + | chr6_2:80925564-80925583 | None:intergenic | 20.0% |
| !! | AATTTACAGATGCTATAATT+AGG | - | chr6_2:80925584-80925603 | Msa0931460:CDS | 20.0% |
| !! | ATTTACAGATGCTATAATTA+GGG | - | chr6_2:80925585-80925604 | Msa0931460:CDS | 20.0% |
| !! | TTGTTAAGAACTAGTATTAA+AGG | + | chr6_2:80926504-80926523 | None:intergenic | 20.0% |
| !!! | ACTTTTACTATGGTAATAAT+TGG | - | chr6_2:80927098-80927117 | Msa0931460:five_prime_UTR | 20.0% |
| !!! | CTTTTACTATGGTAATAATT+GGG | - | chr6_2:80927099-80927118 | Msa0931460:five_prime_UTR | 20.0% |
| ! | TATTAACATCTTAACAATGG+GGG | - | chr6_2:80921557-80921576 | Msa0931460:three_prime_UTR | 25.0% |
| !!! | TATTGCTTTTGAAGTTGAAT+AGG | + | chr6_2:80921732-80921751 | None:intergenic | 25.0% |
| ! | GAATCTGATCTTTAAATCTA+AGG | + | chr6_2:80921758-80921777 | None:intergenic | 25.0% |
| ! | TAAGAAACATACCAAAATGT+TGG | + | chr6_2:80921897-80921916 | None:intergenic | 25.0% |
| ! | TCAAAAACAGACAAAAACAA+AGG | + | chr6_2:80922071-80922090 | None:intergenic | 25.0% |
| ! | ATAATGCTATTCAACTATGA+AGG | - | chr6_2:80922252-80922271 | Msa0931460:CDS | 25.0% |
| ! | CAAATTTCAATGTTTGATTG+CGG | - | chr6_2:80922279-80922298 | Msa0931460:CDS | 25.0% |
| !!! | TATAAAGTGGTTTTAGGTTT+TGG | + | chr6_2:80922352-80922371 | None:intergenic | 25.0% |
| ! | ACAAAGATATGGATCATAAT+AGG | - | chr6_2:80922585-80922604 | Msa0931460:CDS | 25.0% |
| ! | CAAAGATATGGATCATAATA+GGG | - | chr6_2:80922586-80922605 | Msa0931460:CDS | 25.0% |
| ! | AAAGATATGGATCATAATAG+GGG | - | chr6_2:80922587-80922606 | Msa0931460:CDS | 25.0% |
| !! | TAACTTTTAATACCGTTGAA+AGG | - | chr6_2:80922987-80923006 | Msa0931460:intron | 25.0% |
| !!! | ATAATTTGCTTAACTTCTAG+AGG | + | chr6_2:80923310-80923329 | None:intergenic | 25.0% |
| ! | AGTTAAGCAAATTATGAAAG+CGG | - | chr6_2:80923315-80923334 | Msa0931460:CDS | 25.0% |
| ! | AATGAAAGCAGAAATATTCT+CGG | + | chr6_2:80923527-80923546 | None:intergenic | 25.0% |
| !! | TGGAATATTATGTTTTCAGT+TGG | - | chr6_2:80923557-80923576 | Msa0931460:intron | 25.0% |
| !! | GGAATATTATGTTTTCAGTT+GGG | - | chr6_2:80923558-80923577 | Msa0931460:intron | 25.0% |
| ! | AGAATATAAGAGGAAACATT+TGG | - | chr6_2:80924237-80924256 | Msa0931460:CDS | 25.0% |
| ! | GAATATAAGAGGAAACATTT+GGG | - | chr6_2:80924238-80924257 | Msa0931460:CDS | 25.0% |
| ! | GTATTCACTTAAATACTTGT+AGG | - | chr6_2:80924266-80924285 | Msa0931460:CDS | 25.0% |
| !! | TATCTTAGCATTTTACTTGA+TGG | - | chr6_2:80924807-80924826 | Msa0931460:intron | 25.0% |
| !! | TCTGATGATGAATATAGATT+CGG | - | chr6_2:80925116-80925135 | Msa0931460:intron | 25.0% |
| !! | TAATGATATCAGAAACCTTT+TGG | - | chr6_2:80925187-80925206 | Msa0931460:CDS | 25.0% |
| ! | CCTGAATAAAGATTGAAATA+GGG | + | chr6_2:80925220-80925239 | None:intergenic | 25.0% |
| ! | ACCTGAATAAAGATTGAAAT+AGG | + | chr6_2:80925221-80925240 | None:intergenic | 25.0% |
| ! | ATACAATCTATAAGCTATAC+TGG | + | chr6_2:80925739-80925758 | None:intergenic | 25.0% |
| ! | AGATATTCAATATGCTTACT+TGG | + | chr6_2:80926171-80926190 | None:intergenic | 25.0% |
| ! | AGTAAGCATATTGAATATCT+AGG | - | chr6_2:80926171-80926190 | Msa0931460:intron | 25.0% |
| ! | ATGTACTTAATGGGAAAAAA+TGG | + | chr6_2:80926228-80926247 | None:intergenic | 25.0% |
| ! | CAATATTTCTTTGATATCTC+AGG | - | chr6_2:80926253-80926272 | Msa0931460:intron | 25.0% |
| ! | ACATAAAAGAGGTTCTTAAA+TGG | - | chr6_2:80926754-80926773 | Msa0931460:intron | 25.0% |
| ! | CATAAAAGAGGTTCTTAAAT+GGG | - | chr6_2:80926755-80926774 | Msa0931460:intron | 25.0% |
| ! | GAGAAAGATGAAAATTACTA+TGG | - | chr6_2:80926783-80926802 | Msa0931460:intron | 25.0% |
| ! | ACTAAAAAGTGAAAAGTTGT+TGG | - | chr6_2:80926968-80926987 | Msa0931460:five_prime_UTR | 25.0% |
| !!! | GGAAACATTTACTTTTACTA+TGG | - | chr6_2:80927088-80927107 | Msa0931460:five_prime_UTR | 25.0% |
| TGTAATAGTAGTAGTGACAT+GGG | + | chr6_2:80921594-80921613 | None:intergenic | 30.0% | |
| AATGAGAAAGAGAAAAATGG+TGG | + | chr6_2:80921663-80921682 | None:intergenic | 30.0% | |
| GGAAATGAGAAAGAGAAAAA+TGG | + | chr6_2:80921666-80921685 | None:intergenic | 30.0% | |
| TTCCTTTATCAAATGTGTAG+TGG | - | chr6_2:80921682-80921701 | Msa0931460:three_prime_UTR | 30.0% | |
| TCCTTTATCAAATGTGTAGT+GGG | - | chr6_2:80921683-80921702 | Msa0931460:three_prime_UTR | 30.0% | |
| TCTGATCTTTAAATCTAAGG+TGG | + | chr6_2:80921755-80921774 | None:intergenic | 30.0% | |
| ! | CAGATTCATCCTTTTATGTA+AGG | - | chr6_2:80921771-80921790 | Msa0931460:three_prime_UTR | 30.0% |
| ! | AGCTGAAAATTCCAACATTT+TGG | - | chr6_2:80921883-80921902 | Msa0931460:CDS | 30.0% |
| !! | GAAACATTGAGGTTTTTAAG+TGG | - | chr6_2:80922551-80922570 | Msa0931460:CDS | 30.0% |
| !! | TGTTGGTGATTACAAAGATA+TGG | - | chr6_2:80922574-80922593 | Msa0931460:CDS | 30.0% |
| ATCATAATAGGGGAGATAAT+TGG | - | chr6_2:80922597-80922616 | Msa0931460:CDS | 30.0% | |
| ACGGTATTAAAAGTTACAAC+AGG | + | chr6_2:80922983-80923002 | None:intergenic | 30.0% | |
| !! | ATAAGAGTTTGTTATAGGTG+TGG | - | chr6_2:80923094-80923113 | Msa0931460:intron | 30.0% |
| ! | TTTGTTATAGGTGTGGTAAA+GGG | - | chr6_2:80923101-80923120 | Msa0931460:intron | 30.0% |
| !! | TGCTTTCATTTTTGCATGTA+TGG | - | chr6_2:80923537-80923556 | Msa0931460:intron | 30.0% |
| TTTATTTGTAATCAGAGAGC+AGG | - | chr6_2:80923821-80923840 | Msa0931460:CDS | 30.0% | |
| TTTGAACTAATGATTCTGTC+AGG | + | chr6_2:80923887-80923906 | None:intergenic | 30.0% | |
| AGTTCAAACTTGAATTTCTC+TGG | - | chr6_2:80923899-80923918 | Msa0931460:CDS | 30.0% | |
| GTTCAAACTTGAATTTCTCT+GGG | - | chr6_2:80923900-80923919 | Msa0931460:CDS | 30.0% | |
| AGATTACAAAACTCGAATTG+AGG | - | chr6_2:80923978-80923997 | Msa0931460:intron | 30.0% | |
| GATTACAAAACTCGAATTGA+GGG | - | chr6_2:80923979-80923998 | Msa0931460:intron | 30.0% | |
| TAGTGGCAAAAAAACTCTAT+TGG | + | chr6_2:80924057-80924076 | None:intergenic | 30.0% | |
| ! | GCCGAAATATGATAATGATA+AGG | + | chr6_2:80924098-80924117 | None:intergenic | 30.0% |
| GAAGGTCAAAAGAATATAAG+AGG | - | chr6_2:80924227-80924246 | Msa0931460:CDS | 30.0% | |
| ! | TTACGAATTTTTCTCATGAC+AGG | - | chr6_2:80924323-80924342 | Msa0931460:intron | 30.0% |
| TTCAAGATATTTAGGAACTG+TGG | + | chr6_2:80924436-80924455 | None:intergenic | 30.0% | |
| TTCTTCTTCTTGGAATTCAA+GGG | - | chr6_2:80924475-80924494 | Msa0931460:CDS | 30.0% | |
| TATAACATGATTCTCTTCTG+CGG | - | chr6_2:80924681-80924700 | Msa0931460:CDS | 30.0% | |
| TTTGTTCCCGTACAAAAATT+TGG | + | chr6_2:80924730-80924749 | None:intergenic | 30.0% | |
| ATGTTTCGAATGCATGTTTA+GGG | + | chr6_2:80925040-80925059 | None:intergenic | 30.0% | |
| ! | ATGATGAATATAGATTCGGT+AGG | - | chr6_2:80925120-80925139 | Msa0931460:intron | 30.0% |
| AGGTGTTAATGTTAATTCTG+CGG | - | chr6_2:80925140-80925159 | Msa0931460:intron | 30.0% | |
| AAATAGGGTAAAACACCAAA+AGG | + | chr6_2:80925205-80925224 | None:intergenic | 30.0% | |
| CCCTATTTCAATCTTTATTC+AGG | - | chr6_2:80925217-80925236 | Msa0931460:CDS | 30.0% | |
| AATCTTTATTCAGGTAGCAA+TGG | - | chr6_2:80925226-80925245 | Msa0931460:CDS | 30.0% | |
| ! | AAGCTCATCTTTTCTTTTGA+AGG | + | chr6_2:80925428-80925447 | None:intergenic | 30.0% |
| TGATTAGATAAGCAATTACC+CGG | + | chr6_2:80925486-80925505 | None:intergenic | 30.0% | |
| !! | CTGTAATTTTAAGAAGACTC+CGG | + | chr6_2:80925518-80925537 | None:intergenic | 30.0% |
| TAATTAGGGATGGTTTAGAT+TGG | - | chr6_2:80925599-80925618 | Msa0931460:CDS | 30.0% | |
| CAATAAACTTAGGTCATGTT+TGG | + | chr6_2:80925863-80925882 | None:intergenic | 30.0% | |
| CAAACATGACCTAAGTTTAT+TGG | - | chr6_2:80925861-80925880 | Msa0931460:CDS | 30.0% | |
| GCTATGCATCATAATAGAAA+CGG | - | chr6_2:80925883-80925902 | Msa0931460:CDS | 30.0% | |
| ! | AATGTTTTCATTTTCAGCCT+TGG | - | chr6_2:80925922-80925941 | Msa0931460:CDS | 30.0% |
| ! | ATGTTTTCATTTTCAGCCTT+GGG | - | chr6_2:80925923-80925942 | Msa0931460:CDS | 30.0% |
| !! | TGCTTTGAATCATCTTGTTT+TGG | + | chr6_2:80926434-80926453 | None:intergenic | 30.0% |
| AAACAAGATGATTCAAAGCA+AGG | - | chr6_2:80926434-80926453 | Msa0931460:intron | 30.0% | |
| AAAAAGTTTCTTTCCTGTGA+TGG | + | chr6_2:80926682-80926701 | None:intergenic | 30.0% | |
| ! | AACTTTTTGTTGCACAAGTT+AGG | - | chr6_2:80926694-80926713 | Msa0931460:intron | 30.0% |
| ! | ACTTTTTGTTGCACAAGTTA+GGG | - | chr6_2:80926695-80926714 | Msa0931460:intron | 30.0% |
| AGCATTCAAGTACATAAAAG+AGG | - | chr6_2:80926743-80926762 | Msa0931460:intron | 30.0% | |
| ATATCTGTAATTGAATCCTC+AGG | + | chr6_2:80926813-80926832 | None:intergenic | 30.0% | |
| CAACCTCTTAATAGCAAAAT+AGG | + | chr6_2:80926894-80926913 | None:intergenic | 30.0% | |
| !!! | TTTTGCTATTAAGAGGTTGT+TGG | - | chr6_2:80926895-80926914 | Msa0931460:five_prime_UTR | 30.0% |
| TTGGAAAAAATGTAACATGC+TGG | - | chr6_2:80926914-80926933 | Msa0931460:five_prime_UTR | 30.0% | |
| !! | TTGTTGGTAGAGTTCTTTTT+AGG | - | chr6_2:80926984-80927003 | Msa0931460:five_prime_UTR | 30.0% |
| !!! | TGACGTTTTTTAAGACTTGT+TGG | - | chr6_2:80927067-80927086 | Msa0931460:five_prime_UTR | 30.0% |
| ACTATGGTAATAATTGGGAA+AGG | - | chr6_2:80927104-80927123 | Msa0931460:five_prime_UTR | 30.0% | |
| GTGTAATAGTAGTAGTGACA+TGG | + | chr6_2:80921595-80921614 | None:intergenic | 35.0% | |
| ACCCACTACACATTTGATAA+AGG | + | chr6_2:80921687-80921706 | None:intergenic | 35.0% | |
| ! | GAGAGTGTACCTTACATAAA+AGG | + | chr6_2:80921783-80921802 | None:intergenic | 35.0% |
| !! | TGGATATTTTAGAGGGAACA+AGG | - | chr6_2:80922485-80922504 | Msa0931460:intron | 35.0% |
| !!! | TTGAGGTTTTTAAGTGGTGT+TGG | - | chr6_2:80922557-80922576 | Msa0931460:CDS | 35.0% |
| ATAATAGGGGAGATAATTGG+AGG | - | chr6_2:80922600-80922619 | Msa0931460:CDS | 35.0% | |
| TAATAGGGGAGATAATTGGA+GGG | - | chr6_2:80922601-80922620 | Msa0931460:CDS | 35.0% | |
| TCAACAGCTTCGGAATATTT+AGG | - | chr6_2:80922689-80922708 | Msa0931460:intron | 35.0% | |
| TTCGGTACTTCATAAGAAAC+CGG | + | chr6_2:80922719-80922738 | None:intergenic | 35.0% | |
| !! | GTTTGTTATAGGTGTGGTAA+AGG | - | chr6_2:80923100-80923119 | Msa0931460:intron | 35.0% |
| TGAAATTGGGGAAATATTCG+AGG | - | chr6_2:80923263-80923282 | Msa0931460:CDS | 35.0% | |
| GAAATTGGGGAAATATTCGA+GGG | - | chr6_2:80923264-80923283 | Msa0931460:CDS | 35.0% | |
| TATTGGTACGACAAAGAATC+TGG | - | chr6_2:80923466-80923485 | Msa0931460:intron | 35.0% | |
| AGTTCTGCTATAGTCTCTAT+TGG | + | chr6_2:80923727-80923746 | None:intergenic | 35.0% | |
| ! | CTTCTGTCGTTTCATTTGAT+AGG | - | chr6_2:80923850-80923869 | Msa0931460:CDS | 35.0% |
| ! | TGTCGTTTCATTTGATAGGA+AGG | - | chr6_2:80923854-80923873 | Msa0931460:CDS | 35.0% |
| GTCGTTTCATTTGATAGGAA+GGG | - | chr6_2:80923855-80923874 | Msa0931460:CDS | 35.0% | |
| TCGTTTCATTTGATAGGAAG+GGG | - | chr6_2:80923856-80923875 | Msa0931460:CDS | 35.0% | |
| AACACTGAGGTTTACATCAA+TGG | - | chr6_2:80923950-80923969 | Msa0931460:intron | 35.0% | |
| !!! | CACTTTTGGGTTTATGATGA+TGG | - | chr6_2:80924191-80924210 | Msa0931460:CDS | 35.0% |
| CTTCTTCTTCTTGGAATTCA+AGG | - | chr6_2:80924474-80924493 | Msa0931460:CDS | 35.0% | |
| CAAATTTACTGATCAAGAGC+TGG | - | chr6_2:80924746-80924765 | Msa0931460:CDS | 35.0% | |
| !! | GTTTCTAGAATGAATGGACA+AGG | - | chr6_2:80924855-80924874 | Msa0931460:intron | 35.0% |
| CATGTTTCGAATGCATGTTT+AGG | + | chr6_2:80925041-80925060 | None:intergenic | 35.0% | |
| GGTGTTAATGTTAATTCTGC+GGG | - | chr6_2:80925141-80925160 | Msa0931460:intron | 35.0% | |
| TATCTAATCATCCTCGAAAC+CGG | - | chr6_2:80925496-80925515 | Msa0931460:CDS | 35.0% | |
| ACAGATGCTATAATTAGGGA+TGG | - | chr6_2:80925589-80925608 | Msa0931460:CDS | 35.0% | |
| GATGCATAGCCAATAAACTT+AGG | + | chr6_2:80925873-80925892 | None:intergenic | 35.0% | |
| ! | TGTTTTCATTTTCAGCCTTG+GGG | - | chr6_2:80925924-80925943 | Msa0931460:CDS | 35.0% |
| !!! | AATGTGCTCGCTTTTTTTTC+AGG | - | chr6_2:80925977-80925996 | Msa0931460:CDS | 35.0% |
| TATAGTATGTCCCTTTCAGA+AGG | + | chr6_2:80926032-80926051 | None:intergenic | 35.0% | |
| CTGTATAAGCTTCGAACTTT+GGG | + | chr6_2:80926118-80926137 | None:intergenic | 35.0% | |
| TCTGTATAAGCTTCGAACTT+TGG | + | chr6_2:80926119-80926138 | None:intergenic | 35.0% | |
| CAATATGCTTACTTGGTCAT+TGG | + | chr6_2:80926164-80926183 | None:intergenic | 35.0% | |
| CTTAATGGGAAAAAATGGTG+CGG | + | chr6_2:80926223-80926242 | None:intergenic | 35.0% | |
| !! | AAGGAGTGTCTTTGAAACAA+GGG | + | chr6_2:80926485-80926504 | None:intergenic | 35.0% |
| !! | AAAGGAGTGTCTTTGAAACA+AGG | + | chr6_2:80926486-80926505 | None:intergenic | 35.0% |
| TCTTCGAGGAAAAAATGAGA+AGG | - | chr6_2:80926532-80926551 | Msa0931460:intron | 35.0% | |
| !!! | TCGCCTATTTTGCTATTAAG+AGG | - | chr6_2:80926888-80926907 | Msa0931460:five_prime_UTR | 35.0% |
| ! | AAAAATGTAACATGCTGGCT+AGG | - | chr6_2:80926919-80926938 | Msa0931460:five_prime_UTR | 35.0% |
| ATGGTAATAATTGGGAAAGG+AGG | - | chr6_2:80927107-80927126 | Msa0931460:five_prime_UTR | 35.0% | |
| !! | GACTGTGACTTGTTCTTCAT+AGG | - | chr6_2:80922318-80922337 | Msa0931460:CDS | 40.0% |
| TCTTGACTACTCAACAGCTT+CGG | - | chr6_2:80922679-80922698 | Msa0931460:intron | 40.0% | |
| TTCGGAATATTTAGGTCCAC+CGG | - | chr6_2:80922697-80922716 | Msa0931460:intron | 40.0% | |
| ACATCTAGAGGCTCAACTTT+CGG | + | chr6_2:80922737-80922756 | None:intergenic | 40.0% | |
| ! | GCTCTGAATTTCACATCTAG+AGG | + | chr6_2:80922749-80922768 | None:intergenic | 40.0% |
| AAATACGAGACATCGGCAAA+GGG | + | chr6_2:80922784-80922803 | None:intergenic | 40.0% | |
| GTCTCCTAATCATAGTCCAA+GGG | - | chr6_2:80922817-80922836 | Msa0931460:intron | 40.0% | |
| ! | GGTTTCTGTGTTACTAAACC+CGG | - | chr6_2:80922862-80922881 | Msa0931460:intron | 40.0% |
| ! | TTCGAATGTTGCTTCTAAGC+CGG | - | chr6_2:80922934-80922953 | Msa0931460:intron | 40.0% |
| TTCTAAGCCGGTGATTAATG+AGG | - | chr6_2:80922946-80922965 | Msa0931460:intron | 40.0% | |
| TTTCCTCTGAGTCCTTTCAA+CGG | + | chr6_2:80923002-80923021 | None:intergenic | 40.0% | |
| CGCAAATGTGTAACATGCAT+TGG | - | chr6_2:80923214-80923233 | Msa0931460:CDS | 40.0% | |
| ! | GAATCGAAGCGTCTGAAATT+GGG | - | chr6_2:80923250-80923269 | Msa0931460:CDS | 40.0% |
| ! | AATCGAAGCGTCTGAAATTG+GGG | - | chr6_2:80923251-80923270 | Msa0931460:CDS | 40.0% |
| GAAAGCGGAGAAAGAATGTT+CGG | - | chr6_2:80923330-80923349 | Msa0931460:CDS | 40.0% | |
| AGTAAGTCTTCCATCTCATC+AGG | + | chr6_2:80923406-80923425 | None:intergenic | 40.0% | |
| GATGAGATGGAAGACTTACT+TGG | - | chr6_2:80923406-80923425 | Msa0931460:CDS | 40.0% | |
| TTGTCGTACCAATATCTACC+AGG | + | chr6_2:80923460-80923479 | None:intergenic | 40.0% | |
| ACGACAAAGAATCTGGTCTA+TGG | - | chr6_2:80923473-80923492 | Msa0931460:intron | 40.0% | |
| CGACAAAGAATCTGGTCTAT+GGG | - | chr6_2:80923474-80923493 | Msa0931460:intron | 40.0% | |
| GACAAAGAATCTGGTCTATG+GGG | - | chr6_2:80923475-80923494 | Msa0931460:intron | 40.0% | |
| !! | CTTAGCACTGATGCTAGTAA+CGG | - | chr6_2:80923926-80923945 | Msa0931460:CDS | 40.0% |
| !! | TTAGCACTGATGCTAGTAAC+GGG | - | chr6_2:80923927-80923946 | Msa0931460:CDS | 40.0% |
| TTCGGCATCATTGAACTCAA+TGG | - | chr6_2:80924112-80924131 | Msa0931460:intron | 40.0% | |
| !! | TCCACGTGATACTCACTTTT+GGG | - | chr6_2:80924178-80924197 | Msa0931460:CDS | 40.0% |
| !! | TTATGATGATGGTCGTTACG+AGG | - | chr6_2:80924202-80924221 | Msa0931460:CDS | 40.0% |
| AAGAGGAAACATTTGGGAGA+AGG | - | chr6_2:80924244-80924263 | Msa0931460:CDS | 40.0% | |
| ACTCAGAAGCTTCTTCTTCT+TGG | - | chr6_2:80924465-80924484 | Msa0931460:CDS | 40.0% | |
| AACTAGCACCATGTTTAAGC+AGG | - | chr6_2:80924503-80924522 | Msa0931460:intron | 40.0% | |
| AAGCCATACCTGCTTAAACA+TGG | + | chr6_2:80924514-80924533 | None:intergenic | 40.0% | |
| TGATCTTATGATTGCTGAGC+AGG | - | chr6_2:80924704-80924723 | Msa0931460:CDS | 40.0% | |
| ! | GAGCAGGCCAAATTTTTGTA+CGG | - | chr6_2:80924720-80924739 | Msa0931460:CDS | 40.0% |
| ! | AGCAGGCCAAATTTTTGTAC+GGG | - | chr6_2:80924721-80924740 | Msa0931460:CDS | 40.0% |
| ATTTACTGATCAAGAGCTGG+AGG | - | chr6_2:80924749-80924768 | Msa0931460:CDS | 40.0% | |
| !! | GAGGCTGTTTCTAGAATGAA+TGG | - | chr6_2:80924849-80924868 | Msa0931460:intron | 40.0% |
| ! | TCGAATGCATGTTTAGGGTT+AGG | + | chr6_2:80925035-80925054 | None:intergenic | 40.0% |
| TATAATGTCCAGGAGCCAAT+CGG | + | chr6_2:80925311-80925330 | None:intergenic | 40.0% | |
| TCTATAAGCTATACTGGAGC+TGG | + | chr6_2:80925733-80925752 | None:intergenic | 40.0% | |
| TCAATACCTTAATCTCCCCA+AGG | + | chr6_2:80925942-80925961 | None:intergenic | 40.0% | |
| ACGACTATGAACCTTCTGAA+AGG | - | chr6_2:80926018-80926037 | Msa0931460:CDS | 40.0% | |
| ! | CGACTATGAACCTTCTGAAA+GGG | - | chr6_2:80926019-80926038 | Msa0931460:CDS | 40.0% |
| AGGGACATACTATATGCAGA+AGG | - | chr6_2:80926038-80926057 | Msa0931460:CDS | 40.0% | |
| GGGACATACTATATGCAGAA+GGG | - | chr6_2:80926039-80926058 | Msa0931460:CDS | 40.0% | |
| GGACATACTATATGCAGAAG+GGG | - | chr6_2:80926040-80926059 | Msa0931460:CDS | 40.0% | |
| ATCTCAGGTACCAACTCATA+AGG | - | chr6_2:80926268-80926287 | Msa0931460:intron | 40.0% | |
| TCTCAGGTACCAACTCATAA+GGG | - | chr6_2:80926269-80926288 | Msa0931460:intron | 40.0% | |
| GTTTGAAGATGTTAGAGCAG+TGG | - | chr6_2:80926335-80926354 | Msa0931460:intron | 40.0% | |
| TAACTGATCGTAGTCGCTTA+GGG | + | chr6_2:80926373-80926392 | None:intergenic | 40.0% | |
| ATAACTGATCGTAGTCGCTT+AGG | + | chr6_2:80926374-80926393 | None:intergenic | 40.0% | |
| ! | CAAGGAGCTTTTCGAAACAA+TGG | - | chr6_2:80926452-80926471 | Msa0931460:intron | 40.0% |
| AAGCTTGATGTGCTAGTGAT+TGG | + | chr6_2:80926620-80926639 | None:intergenic | 40.0% | |
| !! | TTCCTGTGATGGATGCATAA+AGG | + | chr6_2:80926671-80926690 | None:intergenic | 40.0% |
| AAATTACTATGGTCCACCTG+AGG | - | chr6_2:80926794-80926813 | Msa0931460:intron | 40.0% | |
| TCTGTAATTGAATCCTCAGG+TGG | + | chr6_2:80926810-80926829 | None:intergenic | 40.0% | |
| AACATGCAGATACACGACAA+AGG | + | chr6_2:80927016-80927035 | None:intergenic | 40.0% | |
| ATCTGCATGTTTGCATTCTG+TGG | - | chr6_2:80927025-80927044 | Msa0931460:five_prime_UTR | 40.0% | |
| TTAACAATGGGGGCCTAAGT+GGG | - | chr6_2:80921567-80921586 | Msa0931460:three_prime_UTR | 45.0% | |
| !! | TCAAGATTAGAAGCGTCGTC+AGG | + | chr6_2:80922665-80922684 | None:intergenic | 45.0% |
| GGTACTTCATAAGAAACCGG+TGG | + | chr6_2:80922716-80922735 | None:intergenic | 45.0% | |
| GAAATACGAGACATCGGCAA+AGG | + | chr6_2:80922785-80922804 | None:intergenic | 45.0% | |
| TTGCCGATGTCTCGTATTTC+CGG | - | chr6_2:80922785-80922804 | Msa0931460:intron | 45.0% | |
| ACACCGGAAATACGAGACAT+CGG | + | chr6_2:80922791-80922810 | None:intergenic | 45.0% | |
| GGTCTCCTAATCATAGTCCA+AGG | - | chr6_2:80922816-80922835 | Msa0931460:intron | 45.0% | |
| GACACCCTTGGACTATGATT+AGG | + | chr6_2:80922824-80922843 | None:intergenic | 45.0% | |
| !! | AATCATAGTCCAAGGGTGTC+TGG | - | chr6_2:80922824-80922843 | Msa0931460:intron | 45.0% |
| GTCTGGAAGTTCAGAATCTG+TGG | - | chr6_2:80922841-80922860 | Msa0931460:intron | 45.0% | |
| CTAAACCCGGATCTTTCTTC+TGG | - | chr6_2:80922875-80922894 | Msa0931460:intron | 45.0% | |
| GAAGGATTATGAACCGAAGC+CGG | + | chr6_2:80922917-80922936 | None:intergenic | 45.0% | |
| GGCTTAGAAGCAACATTCGA+AGG | + | chr6_2:80922935-80922954 | None:intergenic | 45.0% | |
| CTCTTCGCCTCATTAATCAC+CGG | + | chr6_2:80922956-80922975 | None:intergenic | 45.0% | |
| ATACCGTTGAAAGGACTCAG+AGG | - | chr6_2:80922996-80923015 | Msa0931460:intron | 45.0% | |
| TGAAAGGACTCAGAGGAAAG+AGG | - | chr6_2:80923003-80923022 | Msa0931460:intron | 45.0% | |
| ATAGGTGTGGTAAAGGGAAG+TGG | - | chr6_2:80923107-80923126 | Msa0931460:intron | 45.0% | |
| TAGGTGTGGTAAAGGGAAGT+GGG | - | chr6_2:80923108-80923127 | Msa0931460:intron | 45.0% | |
| CAATGGGATCAATGCCTGAA+GGG | - | chr6_2:80923191-80923210 | Msa0931460:CDS | 45.0% | |
| ! | AGACGCTTCGATTCGTCAAT+AGG | + | chr6_2:80923244-80923263 | None:intergenic | 45.0% |
| ! | CGAATCGAAGCGTCTGAAAT+TGG | - | chr6_2:80923249-80923268 | Msa0931460:CDS | 45.0% |
| ! | TTCTAGAGGACTCAACAGTC+GGG | + | chr6_2:80923296-80923315 | None:intergenic | 45.0% |
| ! | CTTCTAGAGGACTCAACAGT+CGG | + | chr6_2:80923297-80923316 | None:intergenic | 45.0% |
| AGCTGAAGCCTGGTAGATAT+TGG | - | chr6_2:80923449-80923468 | Msa0931460:intron | 45.0% | |
| AGAATCTGGTCTATGGGGAA+AGG | - | chr6_2:80923480-80923499 | Msa0931460:intron | 45.0% | |
| !! | AACTCGAATTGAGGGTACTC+AGG | - | chr6_2:80923987-80924006 | Msa0931460:intron | 45.0% |
| !! | ACTCGAATTGAGGGTACTCA+GGG | - | chr6_2:80923988-80924007 | Msa0931460:intron | 45.0% |
| ! | GTCCACGTGATACTCACTTT+TGG | - | chr6_2:80924177-80924196 | Msa0931460:CDS | 45.0% |
| ACCCAAAAGTGAGTATCACG+TGG | + | chr6_2:80924182-80924201 | None:intergenic | 45.0% | |
| AGGATAGGGTAGAGAGAAGA+GGG | + | chr6_2:80924370-80924389 | None:intergenic | 45.0% | |
| TTCTCTCTACCCTATCCTCA+TGG | - | chr6_2:80924372-80924391 | Msa0931460:intron | 45.0% | |
| CTTCTTGGAATTCAAGGGTC+TGG | - | chr6_2:80924480-80924499 | Msa0931460:CDS | 45.0% | |
| GCACCATGTTTAAGCAGGTA+TGG | - | chr6_2:80924508-80924527 | Msa0931460:intron | 45.0% | |
| !!! | TGGAAGAGAGCGTTTTGAAG+AGG | - | chr6_2:80924827-80924846 | Msa0931460:intron | 45.0% |
| !!! | AAGAGAGCGTTTTGAAGAGG+AGG | - | chr6_2:80924830-80924849 | Msa0931460:intron | 45.0% |
| AGGTTCTCCTGCTCACATTA+TGG | - | chr6_2:80924875-80924894 | Msa0931460:intron | 45.0% | |
| TCGAAACATGCATGCGTACA+TGG | - | chr6_2:80925051-80925070 | Msa0931460:intron | 45.0% | |
| GCATCTATTCTCTCAACCCA+AGG | - | chr6_2:80925272-80925291 | Msa0931460:CDS | 45.0% | |
| CGGAAAAATGCTTCAGCCTT+GGG | + | chr6_2:80925291-80925310 | None:intergenic | 45.0% | |
| TCGGAAAAATGCTTCAGCCT+TGG | + | chr6_2:80925292-80925311 | None:intergenic | 45.0% | |
| !! | GGCTGAAGCATTTTTCCGAT+TGG | - | chr6_2:80925293-80925312 | Msa0931460:CDS | 45.0% |
| TCCTGGACATTATAGCCACT+GGG | - | chr6_2:80925317-80925336 | Msa0931460:CDS | 45.0% | |
| GAATGCATCTAAATCCCCAG+TGG | + | chr6_2:80925335-80925354 | None:intergenic | 45.0% | |
| TTCCACACTTCTTCGACTAG+TGG | + | chr6_2:80925385-80925404 | None:intergenic | 45.0% | |
| TTGAAGGTCACTTGTATCGC+TGG | + | chr6_2:80925412-80925431 | None:intergenic | 45.0% | |
| TCACTTCCTTCCAGATGTTG+CGG | - | chr6_2:80925447-80925466 | Msa0931460:CDS | 45.0% | |
| !! | AAGAAGTACTCCGCAACATC+TGG | + | chr6_2:80925460-80925479 | None:intergenic | 45.0% |
| ! | TTGCGGAGTACTTCTTAAGC+CGG | - | chr6_2:80925464-80925483 | Msa0931460:CDS | 45.0% |
| TTAAGAAGACTCCGGTTTCG+AGG | + | chr6_2:80925510-80925529 | None:intergenic | 45.0% | |
| TTTCAGCCTTGGGGAGATTA+AGG | - | chr6_2:80925933-80925952 | Msa0931460:CDS | 45.0% | |
| ATATGCAGAAGGGGTTACTC+AGG | - | chr6_2:80926049-80926068 | Msa0931460:CDS | 45.0% | |
| TATGCAGAAGGGGTTACTCA+GGG | - | chr6_2:80926050-80926069 | Msa0931460:CDS | 45.0% | |
| GGTTACTCAGGGAAATGGTT+TGG | - | chr6_2:80926061-80926080 | Msa0931460:CDS | 45.0% | |
| !! | GGGAAATGGTTTGGCTTTCA+TGG | - | chr6_2:80926070-80926089 | Msa0931460:exon | 45.0% |
| TTGGTTGCAACTGAGCATCA+AGG | + | chr6_2:80926145-80926164 | None:intergenic | 45.0% | |
| TGGCATTCACCCTTATGAGT+TGG | + | chr6_2:80926281-80926300 | None:intergenic | 45.0% | |
| ACTCATAAGGGTGAATGCCA+AGG | - | chr6_2:80926281-80926300 | Msa0931460:intron | 45.0% | |
| CTCATAAGGGTGAATGCCAA+GGG | - | chr6_2:80926282-80926301 | Msa0931460:intron | 45.0% | |
| TATCTTGCACCAGACAGCAA+TGG | - | chr6_2:80926393-80926412 | Msa0931460:intron | 45.0% | |
| TATCCCTCAACGCTTGTGAA+TGG | - | chr6_2:80926556-80926575 | Msa0931460:intron | 45.0% | |
| !! | GAACCATTCACAAGCGTTGA+GGG | + | chr6_2:80926562-80926581 | None:intergenic | 45.0% |
| ! | TGAACCATTCACAAGCGTTG+AGG | + | chr6_2:80926563-80926582 | None:intergenic | 45.0% |
| GACCTTTATGCATCCATCAC+AGG | - | chr6_2:80926666-80926685 | Msa0931460:intron | 45.0% | |
| TTGTTGCACAAGTTAGGGCA+AGG | - | chr6_2:80926700-80926719 | Msa0931460:intron | 45.0% | |
| TGTTGCACAAGTTAGGGCAA+GGG | - | chr6_2:80926701-80926720 | Msa0931460:intron | 45.0% | |
| !! | TCTGTGGAAGCACTGTTCAT+TGG | - | chr6_2:80927041-80927060 | Msa0931460:five_prime_UTR | 45.0% |
| CTTAACAATGGGGGCCTAAG+TGG | - | chr6_2:80921566-80921585 | Msa0931460:three_prime_UTR | 50.0% | |
| TAGTGACATGGGTCCCACTT+AGG | + | chr6_2:80921583-80921602 | None:intergenic | 50.0% | |
| GGGAGATAATTGGAGGGAAG+TGG | - | chr6_2:80922607-80922626 | Msa0931460:CDS | 50.0% | |
| GTCTCGTATTTCCGGTGTGA+CGG | - | chr6_2:80922793-80922812 | Msa0931460:intron | 50.0% | |
| TCTCGTATTTCCGGTGTGAC+GGG | - | chr6_2:80922794-80922813 | Msa0931460:intron | 50.0% | |
| TCTGAACTTCCAGACACCCT+TGG | + | chr6_2:80922836-80922855 | None:intergenic | 50.0% | |
| GCGAACCAGAAGAAAGATCC+GGG | + | chr6_2:80922883-80922902 | None:intergenic | 50.0% | |
| GGCGAACCAGAAGAAAGATC+CGG | + | chr6_2:80922884-80922903 | None:intergenic | 50.0% | |
| CGGTGATTAATGAGGCGAAG+AGG | - | chr6_2:80922954-80922973 | Msa0931460:intron | 50.0% | |
| AAGGACTCAGAGGAAAGAGG+TGG | - | chr6_2:80923006-80923025 | Msa0931460:intron | 50.0% | |
| TTCACGACTCCAACGTACTC+CGG | + | chr6_2:80923055-80923074 | None:intergenic | 50.0% | |
| GCAATGGGATCAATGCCTGA+AGG | - | chr6_2:80923190-80923209 | Msa0931460:CDS | 50.0% | |
| GTTACACATTTGCGCCCTTC+AGG | + | chr6_2:80923208-80923227 | None:intergenic | 50.0% | |
| ! | GCTTCGATTCGTCAATAGGC+TGG | + | chr6_2:80923240-80923259 | None:intergenic | 50.0% |
| CCAGAGCAGTTGAGTGTCAA+CGG | - | chr6_2:80923367-80923386 | Msa0931460:CDS | 50.0% | |
| TCTCCTCAAGCCTGATGAGA+TGG | - | chr6_2:80923393-80923412 | Msa0931460:CDS | 50.0% | |
| CTTCCATCTCATCAGGCTTG+AGG | + | chr6_2:80923399-80923418 | None:intergenic | 50.0% | |
| TTCAGCTTGCGTGGAGGTAA+GGG | + | chr6_2:80923436-80923455 | None:intergenic | 50.0% | |
| ! | TGCTAGTAACGGGAACACTG+AGG | - | chr6_2:80923937-80923956 | Msa0931460:intron | 50.0% |
| !! | TGATGATGGTCGTTACGAGG+AGG | - | chr6_2:80924205-80924224 | Msa0931460:CDS | 50.0% |
| GAGGATAGGGTAGAGAGAAG+AGG | + | chr6_2:80924371-80924390 | None:intergenic | 50.0% | |
| TGAGGCTGTCCATGAGGATA+GGG | + | chr6_2:80924384-80924403 | None:intergenic | 50.0% | |
| ATGAGGCTGTCCATGAGGAT+AGG | + | chr6_2:80924385-80924404 | None:intergenic | 50.0% | |
| TATCCTCATGGACAGCCTCA+TGG | - | chr6_2:80924384-80924403 | Msa0931460:intron | 50.0% | |
| CCAGCTTCCATAATGTGAGC+AGG | + | chr6_2:80924885-80924904 | None:intergenic | 50.0% | |
| CCTGCTCACATTATGGAAGC+TGG | - | chr6_2:80924882-80924901 | Msa0931460:intron | 50.0% | |
| !! | GCATTTTTCCGATTGGCTCC+TGG | - | chr6_2:80925300-80925319 | Msa0931460:CDS | 50.0% |
| CTCCTGGACATTATAGCCAC+TGG | - | chr6_2:80925316-80925335 | Msa0931460:CDS | 50.0% | |
| CCTGGACATTATAGCCACTG+GGG | - | chr6_2:80925318-80925337 | Msa0931460:CDS | 50.0% | |
| ! | CATATTCACGTGTCGCTGCA+GGG | + | chr6_2:80925360-80925379 | None:intergenic | 50.0% |
| CACCACTAGTCGAAGAAGTG+TGG | - | chr6_2:80925380-80925399 | Msa0931460:CDS | 50.0% | |
| AGTACTCCGCAACATCTGGA+AGG | + | chr6_2:80925456-80925475 | None:intergenic | 50.0% | |
| ! | TGCGGAGTACTTCTTAAGCC+GGG | - | chr6_2:80925465-80925484 | Msa0931460:CDS | 50.0% |
| GAAGGGGTTACTCAGGGAAA+TGG | - | chr6_2:80926056-80926075 | Msa0931460:CDS | 50.0% | |
| CATGAGCGAAGGTTGCAAGT+GGG | - | chr6_2:80926305-80926324 | Msa0931460:intron | 50.0% | |
| GGTGAAGAAGATGCTTCCGC+CGG | - | chr6_2:80922628-80922647 | Msa0931460:CDS | 55.0% | |
| GTGAAGAAGATGCTTCCGCC+GGG | - | chr6_2:80922629-80922648 | Msa0931460:CDS | 55.0% | |
| !! | TCGTCAGGAACAGAAGCACC+CGG | + | chr6_2:80922650-80922669 | None:intergenic | 55.0% |
| CTCGTATTTCCGGTGTGACG+GGG | - | chr6_2:80922795-80922814 | Msa0931460:intron | 55.0% | |
| ATTAGGAGACCCCGTCACAC+CGG | + | chr6_2:80922807-80922826 | None:intergenic | 55.0% | |
| TGGTTCGCCTTCAGCTTCAC+CGG | - | chr6_2:80922895-80922914 | Msa0931460:intron | 55.0% | |
| GACTCAGAGGAAAGAGGTGG+TGG | - | chr6_2:80923009-80923028 | Msa0931460:intron | 55.0% | |
| ! | TCAGAGGAAAGAGGTGGTGG+AGG | - | chr6_2:80923012-80923031 | Msa0931460:intron | 55.0% |
| ATTGCAGCAGCTGTGTGCTC+AGG | - | chr6_2:80923167-80923186 | Msa0931460:intron | 55.0% | |
| TTGCAGCAGCTGTGTGCTCA+GGG | - | chr6_2:80923168-80923187 | Msa0931460:intron | 55.0% | |
| AGCTGTGTGCTCAGGGCAAT+GGG | - | chr6_2:80923175-80923194 | Msa0931460:intron | 55.0% | |
| CCGTTGACACTCAACTGCTC+TGG | + | chr6_2:80923370-80923389 | None:intergenic | 55.0% | |
| CTTCAGCTTGCGTGGAGGTA+AGG | + | chr6_2:80923437-80923456 | None:intergenic | 55.0% | |
| GATGGTCGTTACGAGGAGGA+AGG | - | chr6_2:80924209-80924228 | Msa0931460:CDS | 55.0% | |
| GATCCATGAGGCTGTCCATG+AGG | + | chr6_2:80924390-80924409 | None:intergenic | 55.0% | |
| GCCTCATGGATCAAGAGACG+AGG | - | chr6_2:80924398-80924417 | Msa0931460:intron | 55.0% | |
| GCCTCGTCTCTTGATCCATG+AGG | + | chr6_2:80924402-80924421 | None:intergenic | 55.0% | |
| CCCCAGTGGCTATAATGTCC+AGG | + | chr6_2:80925321-80925340 | None:intergenic | 55.0% | |
| ! | GCATATTCACGTGTCGCTGC+AGG | + | chr6_2:80925361-80925380 | None:intergenic | 55.0% |
| ATACTGGAGCTGGCGAGCTT+AGG | + | chr6_2:80925723-80925742 | None:intergenic | 55.0% | |
| ! | AATGCCAAGGGCATGAGCGA+AGG | - | chr6_2:80926294-80926313 | Msa0931460:intron | 55.0% |
| GCATGAGCGAAGGTTGCAAG+TGG | - | chr6_2:80926304-80926323 | Msa0931460:intron | 55.0% | |
| TTGTTGTCGTGTGCGCGAAC+GGG | + | chr6_2:80926597-80926616 | None:intergenic | 55.0% | |
| GTTGTTGTCGTGTGCGCGAA+CGG | + | chr6_2:80926598-80926617 | None:intergenic | 55.0% | |
| !! | TCAGGAACAGAAGCACCCGG+CGG | + | chr6_2:80922647-80922666 | None:intergenic | 60.0% |
| !! | GCCTTCAGCTTCACCGGCTT+CGG | - | chr6_2:80922901-80922920 | Msa0931460:intron | 60.0% |
| ACCGAAGCCGGTGAAGCTGA+AGG | + | chr6_2:80922905-80922924 | None:intergenic | 60.0% | |
| !! | GGTGGTGGAGGTTGTGAAGC+CGG | - | chr6_2:80923024-80923043 | Msa0931460:intron | 60.0% |
| GGTTGTGAAGCCGGCGTATC+CGG | - | chr6_2:80923033-80923052 | Msa0931460:intron | 60.0% | |
| CCAACGTACTCCGGATACGC+CGG | + | chr6_2:80923046-80923065 | None:intergenic | 60.0% | |
| CAGCTGTGTGCTCAGGGCAA+TGG | - | chr6_2:80923174-80923193 | Msa0931460:intron | 60.0% | |
| CTACCAGGCTTCAGCTTGCG+TGG | + | chr6_2:80923445-80923464 | None:intergenic | 60.0% | |
| GCAACCTTCGCTCATGCCCT+TGG | + | chr6_2:80926301-80926320 | None:intergenic | 60.0% | |
| GCACCAGACAGCAATGGCAG+CGG | - | chr6_2:80926399-80926418 | Msa0931460:intron | 60.0% | |
| GTTCCGCTGCCATTGCTGTC+TGG | + | chr6_2:80926405-80926424 | None:intergenic | 60.0% | |
| CCGGCGTATCCGGAGTACGT+TGG | - | chr6_2:80923043-80923062 | Msa0931460:intron | 65.0% | |
| CCAGGCTTCAGCTTGCGTGG+AGG | + | chr6_2:80923442-80923461 | None:intergenic | 65.0% | |
| CCTCCACGCAAGCTGAAGCC+TGG | - | chr6_2:80923439-80923458 | Msa0931460:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 80921524 | 80927149 | 80921524 | ID=Msa0931460;Name=Msa0931460 |
| chr6_2 | mRNA | 80921524 | 80927149 | 80921524 | ID=Msa0931460-mRNA-1;Parent=Msa0931460;Name=Msa0931460-mRNA-1;_AED=0.09;_eAED=0.09;_QI=365|1|1|1|0.87|0.77|9|286|839 |
| chr6_2 | exon | 80921524 | 80922398 | 80921524 | ID=Msa0931460-mRNA-1:exon:14212;Parent=Msa0931460-mRNA-1 |
| chr6_2 | exon | 80922502 | 80922674 | 80922502 | ID=Msa0931460-mRNA-1:exon:14211;Parent=Msa0931460-mRNA-1 |
| chr6_2 | exon | 80923187 | 80923434 | 80923187 | ID=Msa0931460-mRNA-1:exon:14210;Parent=Msa0931460-mRNA-1 |
| chr6_2 | exon | 80923770 | 80923947 | 80923770 | ID=Msa0931460-mRNA-1:exon:14209;Parent=Msa0931460-mRNA-1 |
| chr6_2 | exon | 80924149 | 80924328 | 80924149 | ID=Msa0931460-mRNA-1:exon:14208;Parent=Msa0931460-mRNA-1 |
| chr6_2 | exon | 80924408 | 80924512 | 80924408 | ID=Msa0931460-mRNA-1:exon:14207;Parent=Msa0931460-mRNA-1 |
| chr6_2 | exon | 80924664 | 80924801 | 80924664 | ID=Msa0931460-mRNA-1:exon:14206;Parent=Msa0931460-mRNA-1 |
| chr6_2 | exon | 80925172 | 80926176 | 80925172 | ID=Msa0931460-mRNA-1:exon:14205;Parent=Msa0931460-mRNA-1 |
| chr6_2 | exon | 80926881 | 80927149 | 80926881 | ID=Msa0931460-mRNA-1:exon:14204;Parent=Msa0931460-mRNA-1 |
| chr6_2 | five_prime_UTR | 80926881 | 80927149 | 80926881 | ID=Msa0931460-mRNA-1:five_prime_utr;Parent=Msa0931460-mRNA-1 |
| chr6_2 | five_prime_UTR | 80926081 | 80926176 | 80926081 | ID=Msa0931460-mRNA-1:five_prime_utr;Parent=Msa0931460-mRNA-1 |
| chr6_2 | CDS | 80925172 | 80926080 | 80925172 | ID=Msa0931460-mRNA-1:cds;Parent=Msa0931460-mRNA-1 |
| chr6_2 | CDS | 80924664 | 80924801 | 80924664 | ID=Msa0931460-mRNA-1:cds;Parent=Msa0931460-mRNA-1 |
| chr6_2 | CDS | 80924408 | 80924512 | 80924408 | ID=Msa0931460-mRNA-1:cds;Parent=Msa0931460-mRNA-1 |
| chr6_2 | CDS | 80924149 | 80924328 | 80924149 | ID=Msa0931460-mRNA-1:cds;Parent=Msa0931460-mRNA-1 |
| chr6_2 | CDS | 80923770 | 80923947 | 80923770 | ID=Msa0931460-mRNA-1:cds;Parent=Msa0931460-mRNA-1 |
| chr6_2 | CDS | 80923187 | 80923434 | 80923187 | ID=Msa0931460-mRNA-1:cds;Parent=Msa0931460-mRNA-1 |
| chr6_2 | CDS | 80922502 | 80922674 | 80922502 | ID=Msa0931460-mRNA-1:cds;Parent=Msa0931460-mRNA-1 |
| chr6_2 | CDS | 80921810 | 80922398 | 80921810 | ID=Msa0931460-mRNA-1:cds;Parent=Msa0931460-mRNA-1 |
| chr6_2 | three_prime_UTR | 80921524 | 80921809 | 80921524 | ID=Msa0931460-mRNA-1:three_prime_utr;Parent=Msa0931460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
