Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719510 | XP_003612703.1 | 98.451 | 839 | 13 | 0 | 1 | 839 | 1 | 839 | 0.0 | 1723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719510 | sp|Q9C516|XLG3_ARATH | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719510 | G7K9K2 | 98.451 | 839 | 13 | 0 | 1 | 839 | 1 | 839 | 0.0 | 1723 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026130 | Msa0719510 | 0.826786 | 2.241141e-54 | -8.615850e-47 |
| Msa0027260 | Msa0719510 | 0.855846 | 4.794915e-62 | -8.615850e-47 |
| Msa0056470 | Msa0719510 | 0.805392 | 1.364526e-49 | -8.615850e-47 |
| Msa0094470 | Msa0719510 | 0.819330 | 1.228902e-52 | -8.615850e-47 |
| Msa0112790 | Msa0719510 | 0.807275 | 5.474352e-50 | -8.615850e-47 |
| Msa0621950 | Msa0719510 | 0.805899 | 1.068333e-49 | -8.615850e-47 |
| Msa0661300 | Msa0719510 | 0.809528 | 1.810239e-50 | -8.615850e-47 |
| Msa0669520 | Msa0719510 | 0.817662 | 2.935525e-52 | -8.615850e-47 |
| Msa0719510 | Msa0731500 | 0.802360 | 5.820409e-49 | -8.615850e-47 |
| Msa0719510 | Msa0784200 | 0.813876 | 2.050237e-51 | -8.615850e-47 |
| Msa0719510 | Msa0802490 | 0.929355 | 7.829571e-93 | -8.615850e-47 |
| Msa0719510 | Msa0818310 | 0.820847 | 5.523834e-53 | -8.615850e-47 |
| Msa0719510 | Msa0858770 | 0.823666 | 1.225041e-53 | -8.615850e-47 |
| Msa0719510 | Msa0902760 | 0.804252 | 2.361683e-49 | -8.615850e-47 |
| Msa0719510 | Msa0909230 | 0.801087 | 1.062455e-48 | -8.615850e-47 |
| Msa0719510 | Msa0931460 | 0.994958 | 1.012226e-211 | -8.615850e-47 |
| Msa0719510 | Msa0945110 | 0.824196 | 9.200351e-54 | -8.615850e-47 |
| Msa0719510 | Msa0953310 | 0.801292 | 9.647041e-49 | -8.615850e-47 |
| Msa0719510 | Msa1004600 | 0.800346 | 1.504843e-48 | -8.615850e-47 |
| Msa0719510 | Msa1013400 | 0.807334 | 5.317983e-50 | -8.615850e-47 |
| Msa0719510 | Msa1019240 | 0.805954 | 1.040054e-49 | -8.615850e-47 |
| Msa0719510 | Msa1019260 | 0.831229 | 1.879031e-55 | -8.615850e-47 |
| Msa0719510 | Msa1034880 | 0.804128 | 2.506526e-49 | -8.615850e-47 |
| Msa0719510 | Msa1081150 | 0.800660 | 1.298314e-48 | -8.615850e-47 |
| Msa0719510 | Msa1093530 | 0.803913 | 2.777761e-49 | -8.615850e-47 |
| Msa0719510 | Msa1093840 | 0.815917 | 7.232185e-52 | -8.615850e-47 |
| Msa0719510 | Msa1104140 | 0.810084 | 1.374211e-50 | -8.615850e-47 |
| Msa0719510 | Msa1104210 | 0.813716 | 2.223086e-51 | -8.615850e-47 |
| Msa0719510 | Msa1106700 | 0.809375 | 1.952094e-50 | -8.615850e-47 |
| Msa0719510 | Msa1115770 | 0.824648 | 7.204275e-54 | -8.615850e-47 |
| Msa0719510 | Msa1126510 | 0.835742 | 1.405840e-56 | -8.615850e-47 |
| Msa0719510 | Msa1126830 | 0.816338 | 5.821100e-52 | -8.615850e-47 |
| Msa0719510 | Msa1128600 | 0.822530 | 2.255109e-53 | -8.615850e-47 |
| Msa0719510 | Msa1165940 | 0.837582 | 4.775194e-57 | -8.615850e-47 |
| Msa0719510 | Msa1166330 | 0.822997 | 1.755471e-53 | -8.615850e-47 |
| Msa0719510 | Msa1166340 | 0.813537 | 2.433952e-51 | -8.615850e-47 |
| Msa0719510 | Msa1166860 | 0.824272 | 8.831427e-54 | -8.615850e-47 |
| Msa0719510 | Msa1218600 | 0.812312 | 4.516967e-51 | -8.615850e-47 |
| Msa0719510 | Msa1251160 | 0.816261 | 6.056563e-52 | -8.615850e-47 |
| Msa0719510 | Msa1379760 | 0.803874 | 2.831006e-49 | -8.615850e-47 |
| Msa0719510 | Msa1381350 | 0.806409 | 8.342985e-50 | -8.615850e-47 |
| Msa0719510 | Msa1394290 | 0.808734 | 2.678081e-50 | -8.615850e-47 |
| Msa0719510 | Msa1401860 | 0.805364 | 1.383615e-49 | -8.615850e-47 |
| Msa0122970 | Msa0719510 | 0.804473 | 2.124337e-49 | -8.615850e-47 |
| Msa0128860 | Msa0719510 | 0.805420 | 1.346235e-49 | -8.615850e-47 |
| Msa0134610 | Msa0719510 | 0.825180 | 5.395104e-54 | -8.615850e-47 |
| Msa0140820 | Msa0719510 | 0.831797 | 1.361814e-55 | -8.615850e-47 |
| Msa0166590 | Msa0719510 | 0.823694 | 1.206602e-53 | -8.615850e-47 |
| Msa0174730 | Msa0719510 | 0.805366 | 1.382054e-49 | -8.615850e-47 |
| Msa0199880 | Msa0719510 | 0.812924 | 3.318723e-51 | -8.615850e-47 |
| Msa0231980 | Msa0719510 | 0.802973 | 4.350562e-49 | -8.615850e-47 |
| Msa0369450 | Msa0719510 | 0.843928 | 1.036005e-58 | -8.615850e-47 |
| Msa0380300 | Msa0719510 | 0.809559 | 1.782497e-50 | -8.615850e-47 |
| Msa0475790 | Msa0719510 | 0.843706 | 1.187960e-58 | -8.615850e-47 |
| Msa0255090 | Msa0719510 | 0.802346 | 5.860453e-49 | -8.615850e-47 |
| Msa0280610 | Msa0719510 | 0.827923 | 1.196306e-54 | -8.615850e-47 |
| Msa0294160 | Msa0719510 | 0.809593 | 1.752190e-50 | -8.615850e-47 |
| Msa0518390 | Msa0719510 | 0.808777 | 2.621945e-50 | -8.615850e-47 |
| Msa0524500 | Msa0719510 | 0.807052 | 6.100613e-50 | -8.615850e-47 |
| Msa0556060 | Msa0719510 | 0.814040 | 1.886339e-51 | -8.615850e-47 |
| Msa0581110 | Msa0719510 | 0.818104 | 2.332663e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719510 | MtrunA17_Chr5g0410081 | 98.451 | 839 | 13 | 0 | 1 | 839 | 1 | 839 | 0.0 | 1723 |
| Msa0719510 | MtrunA17_Chr6g0479291 | 62.583 | 751 | 252 | 12 | 101 | 839 | 198 | 931 | 0.0 | 971 |
| Msa0719510 | MtrunA17_Chr5g0402991 | 52.475 | 707 | 309 | 11 | 125 | 815 | 192 | 887 | 0.0 | 721 |
| Msa0719510 | MtrunA17_Chr8g0374061 | 54.021 | 659 | 277 | 9 | 171 | 815 | 118 | 764 | 0.0 | 698 |
| Msa0719510 | MtrunA17_Chr1g0162561 | 48.851 | 653 | 311 | 8 | 171 | 813 | 209 | 848 | 0.0 | 608 |
| Msa0719510 | MtrunA17_Chr1g0151141 | 33.586 | 396 | 207 | 16 | 422 | 810 | 36 | 382 | 3.40e-50 | 181 |
| Msa0719510 | MtrunA17_Chr3g0136391 | 27.179 | 195 | 115 | 7 | 543 | 735 | 24 | 193 | 4.44e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719510 | AT1G31930.5 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0719510 | AT1G31930.2 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0719510 | AT1G31930.3 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0719510 | AT1G31930.6 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0719510 | AT1G31930.1 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0719510 | AT1G31930.4 | 67.749 | 862 | 234 | 10 | 4 | 839 | 5 | 848 | 0.0 | 1149 |
| Msa0719510 | AT2G23460.1 | 50.338 | 739 | 334 | 12 | 96 | 815 | 144 | 868 | 0.0 | 705 |
| Msa0719510 | AT4G34390.1 | 45.507 | 690 | 327 | 16 | 161 | 833 | 204 | 861 | 0.0 | 552 |
| Msa0719510 | AT4G34390.2 | 43.043 | 690 | 305 | 16 | 161 | 833 | 204 | 822 | 1.56e-166 | 504 |
| Msa0719510 | AT2G26300.2 | 31.159 | 414 | 218 | 14 | 408 | 810 | 16 | 373 | 1.12e-51 | 186 |
| Msa0719510 | AT2G26300.1 | 31.159 | 414 | 218 | 14 | 408 | 810 | 16 | 373 | 1.12e-51 | 186 |
Find 238 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATCGAAGCGTCTGAAAT+TGG | 0.149417 | 5_1:-14884932 | Msa0719510:CDS |
| ACTCAGAAGCTTCTTCTTCT+TGG | 0.179208 | 5_1:-14883716 | Msa0719510:CDS |
| TGCTTTGAATCATCTTGTTT+TGG | 0.199485 | 5_1:+14881750 | None:intergenic |
| AGAAAATAAGAGTTTGTTAT+AGG | 0.213096 | 5_1:-14885092 | Msa0719510:CDS |
| TTGTTAAGAACTAGTATTAA+AGG | 0.230147 | 5_1:+14881680 | None:intergenic |
| TTGCCGATGTCTCGTATTTC+CGG | 0.238304 | 5_1:-14885396 | Msa0719510:CDS |
| CAACCTCTTAATAGCAAAAT+AGG | 0.249379 | 5_1:+14881290 | None:intergenic |
| ACAAAGATATGGATCATAAT+AGG | 0.252815 | 5_1:-14885596 | Msa0719510:exon |
| ACATAAAAGAGGTTCTTAAA+TGG | 0.262325 | 5_1:-14881427 | Msa0719510:CDS |
| TCAACAGCTTCGGAATATTT+AGG | 0.273946 | 5_1:-14885492 | Msa0719510:CDS |
| AGACGCTTCGATTCGTCAAT+AGG | 0.283648 | 5_1:+14884940 | None:intergenic |
| GGGAAATGGTTTGGCTTTCA+TGG | 0.284339 | 5_1:-14882111 | Msa0719510:CDS |
| AGTTCAAACTTGAATTTCTC+TGG | 0.305993 | 5_1:-14884282 | Msa0719510:CDS |
| GAGAGTGTACCTTACATAAA+AGG | 0.307610 | 5_1:+14886401 | None:intergenic |
| GAATCGAAGCGTCTGAAATT+GGG | 0.309669 | 5_1:-14884931 | Msa0719510:CDS |
| CTGTATAAGCTTCGAACTTT+GGG | 0.314678 | 5_1:+14882066 | None:intergenic |
| CTAAACCCGGATCTTTCTTC+TGG | 0.316664 | 5_1:-14885306 | Msa0719510:CDS |
| AGGTTCTCCTGCTCACATTA+TGG | 0.317177 | 5_1:-14883306 | Msa0719510:CDS |
| GTCCACGTGATACTCACTTT+TGG | 0.317550 | 5_1:-14884004 | Msa0719510:CDS |
| CTTCTTCTTCTTGGAATTCA+AGG | 0.319947 | 5_1:-14883707 | Msa0719510:CDS |
| CTTCTTGGAATTCAAGGGTC+TGG | 0.324531 | 5_1:-14883701 | Msa0719510:CDS |
| ACGACAAAGAATCTGGTCTA+TGG | 0.324545 | 5_1:-14884708 | Msa0719510:CDS |
| GCCTTCAGCTTCACCGGCTT+CGG | 0.330535 | 5_1:-14885280 | Msa0719510:CDS |
| CAAAGATATGGATCATAATA+GGG | 0.331376 | 5_1:-14885595 | Msa0719510:exon |
| AGAATATAAGAGGAAACATT+TGG | 0.337123 | 5_1:-14883944 | Msa0719510:CDS |
| CAATATGCTTACTTGGTCAT+TGG | 0.347638 | 5_1:+14882020 | None:intergenic |
| GGTTGTGAAGCCGGCGTATC+CGG | 0.350381 | 5_1:-14885148 | Msa0719510:CDS |
| GTTACACATTTGCGCCCTTC+AGG | 0.359236 | 5_1:+14884976 | None:intergenic |
| GAATCTGATCTTTAAATCTA+AGG | 0.368350 | 5_1:+14886426 | None:intergenic |
| TCTGTATAAGCTTCGAACTT+TGG | 0.372490 | 5_1:+14882065 | None:intergenic |
| TCTCGTATTTCCGGTGTGAC+GGG | 0.380690 | 5_1:-14885387 | Msa0719510:CDS |
| ACCCACTACACATTTGATAA+AGG | 0.389361 | 5_1:+14886497 | None:intergenic |
| ATCATAATAGGGGAGATAAT+TGG | 0.389586 | 5_1:-14885584 | Msa0719510:CDS |
| ATTATTAACATCTTAACAAT+GGG | 0.389953 | 5_1:-14886626 | Msa0719510:five_prime_UTR |
| ACATCTAGAGGCTCAACTTT+CGG | 0.391126 | 5_1:+14885447 | None:intergenic |
| ATAACTGATCGTAGTCGCTT+AGG | 0.393112 | 5_1:+14881810 | None:intergenic |
| AAGAAGTACTCCGCAACATC+TGG | 0.402272 | 5_1:+14882724 | None:intergenic |
| TTTGTTATAGGTGTGGTAAA+GGG | 0.404012 | 5_1:-14885080 | Msa0719510:CDS |
| AGCTGAAGCCTGGTAGATAT+TGG | 0.404152 | 5_1:-14884732 | Msa0719510:CDS |
| GAGAAAGATGAAAATTACTA+TGG | 0.405466 | 5_1:-14881398 | Msa0719510:CDS |
| AATCATAGTCCAAGGGTGTC+TGG | 0.406251 | 5_1:-14885357 | Msa0719510:CDS |
| AGCTGTGTGCTCAGGGCAAT+GGG | 0.407300 | 5_1:-14885006 | Msa0719510:CDS |
| GGTTACTCAGGGAAATGGTT+TGG | 0.408020 | 5_1:-14882120 | Msa0719510:CDS |
| GCATATTCACGTGTCGCTGC+AGG | 0.408474 | 5_1:+14882823 | None:intergenic |
| CAGCTGTGTGCTCAGGGCAA+TGG | 0.408957 | 5_1:-14885007 | Msa0719510:CDS |
| ATCTCAGGTACCAACTCATA+AGG | 0.412874 | 5_1:-14881913 | Msa0719510:intron |
| TTCCTGTGATGGATGCATAA+AGG | 0.425207 | 5_1:+14881513 | None:intergenic |
| ATTGCAGCAGCTGTGTGCTC+AGG | 0.426052 | 5_1:-14885014 | Msa0719510:CDS |
| CTTCAGCTTGCGTGGAGGTA+AGG | 0.430576 | 5_1:+14884747 | None:intergenic |
| CTCCTGGACATTATAGCCAC+TGG | 0.433165 | 5_1:-14882865 | Msa0719510:CDS |
| CATAAAAGAGGTTCTTAAAT+GGG | 0.433650 | 5_1:-14881426 | Msa0719510:CDS |
| TTGTTGTCGTGTGCGCGAAC+GGG | 0.436899 | 5_1:+14881587 | None:intergenic |
| GAAGGTCAAAAGAATATAAG+AGG | 0.437475 | 5_1:-14883954 | Msa0719510:CDS |
| TCTGTGGAAGCACTGTTCAT+TGG | 0.437812 | 5_1:-14881140 | Msa0719510:three_prime_UTR |
| TATTGGTACGACAAAGAATC+TGG | 0.439746 | 5_1:-14884715 | Msa0719510:CDS |
| GTCTCGTATTTCCGGTGTGA+CGG | 0.440450 | 5_1:-14885388 | Msa0719510:CDS |
| GAATATAAGAGGAAACATTT+GGG | 0.444612 | 5_1:-14883943 | Msa0719510:CDS |
| GTTCCGCTGCCATTGCTGTC+TGG | 0.451485 | 5_1:+14881779 | None:intergenic |
| TAACAAATACGACGTCTTCG+AGG | 0.451533 | 5_1:-14881663 | Msa0719510:CDS |
| TTGAAGGTCACTTGTATCGC+TGG | 0.452762 | 5_1:+14882772 | None:intergenic |
| TGTTGGTGATTACAAAGATA+TGG | 0.455106 | 5_1:-14885607 | Msa0719510:exon |
| GAAGGGGTTACTCAGGGAAA+TGG | 0.456344 | 5_1:-14882125 | Msa0719510:CDS |
| GTTTGTTATAGGTGTGGTAA+AGG | 0.458659 | 5_1:-14885081 | Msa0719510:CDS |
| ACGGTATTAAAAGTTACAAC+AGG | 0.462099 | 5_1:+14885201 | None:intergenic |
| GGTGGTGGAGGTTGTGAAGC+CGG | 0.462707 | 5_1:-14885157 | Msa0719510:CDS |
| TTTGAACTAATGATTCTGTC+AGG | 0.463062 | 5_1:+14884297 | None:intergenic |
| TTCGGTACTTCATAAGAAAC+CGG | 0.463768 | 5_1:+14885465 | None:intergenic |
| TAACTGATCGTAGTCGCTTA+GGG | 0.465956 | 5_1:+14881811 | None:intergenic |
| AACTCGAATTGAGGGTACTC+AGG | 0.466428 | 5_1:-14884194 | Msa0719510:CDS |
| GCAACCTTCGCTCATGCCCT+TGG | 0.468837 | 5_1:+14881883 | None:intergenic |
| GTTGTTGTCGTGTGCGCGAA+CGG | 0.469425 | 5_1:+14881586 | None:intergenic |
| CGCAAATGTGTAACATGCAT+TGG | 0.473345 | 5_1:-14884967 | Msa0719510:CDS |
| TTCACGACTCCAACGTACTC+CGG | 0.475231 | 5_1:+14885129 | None:intergenic |
| TGGCATTCACCCTTATGAGT+TGG | 0.476657 | 5_1:+14881903 | None:intergenic |
| GTTCAAACTTGAATTTCTCT+GGG | 0.480058 | 5_1:-14884281 | Msa0719510:CDS |
| AGTAAGTCTTCCATCTCATC+AGG | 0.480096 | 5_1:+14884778 | None:intergenic |
| TCTGAACTTCCAGACACCCT+TGG | 0.482123 | 5_1:+14885348 | None:intergenic |
| TCCTTTATCAAATGTGTAGT+GGG | 0.486978 | 5_1:-14886498 | Msa0719510:five_prime_UTR |
| CGACAAAGAATCTGGTCTAT+GGG | 0.487042 | 5_1:-14884707 | Msa0719510:CDS |
| GGCGAACCAGAAGAAAGATC+CGG | 0.487194 | 5_1:+14885300 | None:intergenic |
| GACACCCTTGGACTATGATT+AGG | 0.488171 | 5_1:+14885360 | None:intergenic |
| TTCTCTCTACCCTATCCTCA+TGG | 0.490716 | 5_1:-14883809 | Msa0719510:CDS |
| GGGAGATAATTGGAGGGAAG+TGG | 0.490835 | 5_1:-14885574 | Msa0719510:CDS |
| GACTCAGAGGAAAGAGGTGG+TGG | 0.491543 | 5_1:-14885172 | Msa0719510:CDS |
| AAGCTTGATGTGCTAGTGAT+TGG | 0.491832 | 5_1:+14881564 | None:intergenic |
| TCCTGGACATTATAGCCACT+GGG | 0.495286 | 5_1:-14882864 | Msa0719510:CDS |
| TTTAACAATTTGAAACATTG+AGG | 0.496872 | 5_1:-14885641 | Msa0719510:five_prime_UTR |
| GAGGCTGTTTCTAGAATGAA+TGG | 0.497615 | 5_1:-14883332 | Msa0719510:CDS |
| AACACTGAGGTTTACATCAA+TGG | 0.499687 | 5_1:-14884231 | Msa0719510:CDS |
| TTCGGAATATTTAGGTCCAC+CGG | 0.500662 | 5_1:-14885484 | Msa0719510:CDS |
| GAACCATTCACAAGCGTTGA+GGG | 0.500930 | 5_1:+14881622 | None:intergenic |
| GATTATTAACATCTTAACAA+TGG | 0.501873 | 5_1:-14886627 | Msa0719510:five_prime_UTR |
| ATAATTTGCTTAACTTCTAG+AGG | 0.502073 | 5_1:+14884874 | None:intergenic |
| TTGCGGAGTACTTCTTAAGC+CGG | 0.502186 | 5_1:-14882717 | Msa0719510:CDS |
| TTCCTTTATCAAATGTGTAG+TGG | 0.502436 | 5_1:-14886499 | Msa0719510:five_prime_UTR |
| ATCTGCATGTTTGCATTCTG+TGG | 0.504877 | 5_1:-14881156 | Msa0719510:three_prime_UTR |
| ATATGCAGAAGGGGTTACTC+AGG | 0.507616 | 5_1:-14882132 | Msa0719510:CDS |
| GAAAGCGGAGAAAGAATGTT+CGG | 0.508911 | 5_1:-14884851 | Msa0719510:CDS |
| CCGTTGACACTCAACTGCTC+TGG | 0.510346 | 5_1:+14884814 | None:intergenic |
| TTCAGCTTGCGTGGAGGTAA+GGG | 0.513690 | 5_1:+14884748 | None:intergenic |
| TTCGAATGTTGCTTCTAAGC+CGG | 0.514313 | 5_1:-14885247 | Msa0719510:CDS |
| TTCTTCTTCTTGGAATTCAA+GGG | 0.514846 | 5_1:-14883706 | Msa0719510:CDS |
| GACCTTTATGCATCCATCAC+AGG | 0.514967 | 5_1:-14881515 | Msa0719510:CDS |
| ATGAGGCTGTCCATGAGGAT+AGG | 0.516805 | 5_1:+14883799 | None:intergenic |
| CCTGCTCACATTATGGAAGC+TGG | 0.518201 | 5_1:-14883299 | Msa0719510:intron |
| CTTCTAGAGGACTCAACAGT+CGG | 0.518703 | 5_1:+14884887 | None:intergenic |
| TCACTTCCTTCCAGATGTTG+CGG | 0.521515 | 5_1:-14882734 | Msa0719510:CDS |
| TGGTTCGCCTTCAGCTTCAC+CGG | 0.523608 | 5_1:-14885286 | Msa0719510:CDS |
| TATCCCTCAACGCTTGTGAA+TGG | 0.523776 | 5_1:-14881625 | Msa0719510:CDS |
| ATATCTGTAATTGAATCCTC+AGG | 0.524085 | 5_1:+14881371 | None:intergenic |
| CCTCCACGCAAGCTGAAGCC+TGG | 0.524656 | 5_1:-14884742 | Msa0719510:CDS |
| TTAGCACTGATGCTAGTAAC+GGG | 0.524938 | 5_1:-14884254 | Msa0719510:CDS |
| AATCGAAGCGTCTGAAATTG+GGG | 0.525822 | 5_1:-14884930 | Msa0719510:CDS |
| GAAGGATTATGAACCGAAGC+CGG | 0.527127 | 5_1:+14885267 | None:intergenic |
| CTCTTCGCCTCATTAATCAC+CGG | 0.527445 | 5_1:+14885228 | None:intergenic |
| TCTCAGGTACCAACTCATAA+GGG | 0.529434 | 5_1:-14881912 | Msa0719510:intron |
| CCCCAGTGGCTATAATGTCC+AGG | 0.529739 | 5_1:+14882863 | None:intergenic |
| GTCTGGAAGTTCAGAATCTG+TGG | 0.530261 | 5_1:-14885340 | Msa0719510:CDS |
| ATAGGTGTGGTAAAGGGAAG+TGG | 0.530493 | 5_1:-14885074 | Msa0719510:CDS |
| GATGAGATGGAAGACTTACT+TGG | 0.532781 | 5_1:-14884775 | Msa0719510:CDS |
| TCAAGATTAGAAGCGTCGTC+AGG | 0.533871 | 5_1:+14885519 | None:intergenic |
| TTCCACACTTCTTCGACTAG+TGG | 0.534470 | 5_1:+14882799 | None:intergenic |
| AAATACGAGACATCGGCAAA+GGG | 0.534604 | 5_1:+14885400 | None:intergenic |
| CGACTATGAACCTTCTGAAA+GGG | 0.535573 | 5_1:-14882162 | Msa0719510:CDS |
| TCTCCTCAAGCCTGATGAGA+TGG | 0.535683 | 5_1:-14884788 | Msa0719510:CDS |
| TGAGGCTGTCCATGAGGATA+GGG | 0.536471 | 5_1:+14883800 | None:intergenic |
| AATCTTTATTCAGGTAGCAA+TGG | 0.537742 | 5_1:-14882955 | Msa0719510:intron |
| TTGTTGCACAAGTTAGGGCA+AGG | 0.539883 | 5_1:-14881481 | Msa0719510:CDS |
| ACTATGGTAATAATTGGGAA+AGG | 0.540417 | 5_1:-14881077 | Msa0719510:three_prime_UTR |
| AGCATTCAAGTACATAAAAG+AGG | 0.541232 | 5_1:-14881438 | Msa0719510:CDS |
| CAAATTTACTGATCAAGAGC+TGG | 0.541738 | 5_1:-14883435 | Msa0719510:CDS |
| AGGATAGGGTAGAGAGAAGA+GGG | 0.541964 | 5_1:+14883814 | None:intergenic |
| TATAATGTCCAGGAGCCAAT+CGG | 0.542069 | 5_1:+14882873 | None:intergenic |
| GATTACAAAACTCGAATTGA+GGG | 0.543174 | 5_1:-14884202 | Msa0719510:CDS |
| TAGTGACATGGGTCCCACTT+AGG | 0.545980 | 5_1:+14886601 | None:intergenic |
| TCTTGACTACTCAACAGCTT+CGG | 0.546361 | 5_1:-14885502 | Msa0719510:CDS |
| TATCCTCATGGACAGCCTCA+TGG | 0.548421 | 5_1:-14883797 | Msa0719510:CDS |
| AACTAGCACCATGTTTAAGC+AGG | 0.548505 | 5_1:-14883678 | Msa0719510:intron |
| CCAGCTTCCATAATGTGAGC+AGG | 0.550063 | 5_1:+14883299 | None:intergenic |
| AAACAAGATGATTCAAAGCA+AGG | 0.551964 | 5_1:-14881747 | Msa0719510:CDS |
| TTGTCGTACCAATATCTACC+AGG | 0.553776 | 5_1:+14884724 | None:intergenic |
| TTCTAAGCCGGTGATTAATG+AGG | 0.555132 | 5_1:-14885235 | Msa0719510:CDS |
| CTCGTATTTCCGGTGTGACG+GGG | 0.555222 | 5_1:-14885386 | Msa0719510:CDS |
| AAGAGGAAACATTTGGGAGA+AGG | 0.555224 | 5_1:-14883937 | Msa0719510:intron |
| CTACCAGGCTTCAGCTTGCG+TGG | 0.558966 | 5_1:+14884739 | None:intergenic |
| TTGCAGCAGCTGTGTGCTCA+GGG | 0.559361 | 5_1:-14885013 | Msa0719510:CDS |
| TGCGGAGTACTTCTTAAGCC+GGG | 0.559400 | 5_1:-14882716 | Msa0719510:intron |
| CCAGAGCAGTTGAGTGTCAA+CGG | 0.559543 | 5_1:-14884814 | Msa0719510:CDS |
| GGTCTCCTAATCATAGTCCA+AGG | 0.562082 | 5_1:-14885365 | Msa0719510:CDS |
| CAATGGGATCAATGCCTGAA+GGG | 0.562138 | 5_1:-14884990 | Msa0719510:CDS |
| CTTCCATCTCATCAGGCTTG+AGG | 0.562379 | 5_1:+14884785 | None:intergenic |
| TTCTAGAGGACTCAACAGTC+GGG | 0.562838 | 5_1:+14884888 | None:intergenic |
| GTGAAGAAGATGCTTCCGCC+GGG | 0.565713 | 5_1:-14885552 | Msa0719510:CDS |
| TTGGTTGCAACTGAGCATCA+AGG | 0.566584 | 5_1:+14882039 | None:intergenic |
| AAAGGAGTGTCTTTGAAACA+AGG | 0.567459 | 5_1:+14881698 | None:intergenic |
| ATAAGAGTTTGTTATAGGTG+TGG | 0.569468 | 5_1:-14885087 | Msa0719510:CDS |
| GAAATACGAGACATCGGCAA+AGG | 0.569787 | 5_1:+14885399 | None:intergenic |
| GCTTCGATTCGTCAATAGGC+TGG | 0.569875 | 5_1:+14884944 | None:intergenic |
| TAGGTGTGGTAAAGGGAAGT+GGG | 0.572746 | 5_1:-14885073 | Msa0719510:CDS |
| TGAAATTGGGGAAATATTCG+AGG | 0.573393 | 5_1:-14884918 | Msa0719510:CDS |
| TCAGAGGAAAGAGGTGGTGG+AGG | 0.574303 | 5_1:-14885169 | Msa0719510:CDS |
| ACTCATAAGGGTGAATGCCA+AGG | 0.574599 | 5_1:-14881900 | Msa0719510:CDS |
| AGATTACAAAACTCGAATTG+AGG | 0.575057 | 5_1:-14884203 | Msa0719510:CDS |
| GGTGAAGAAGATGCTTCCGC+CGG | 0.575635 | 5_1:-14885553 | Msa0719510:CDS |
| GGTTTCTGTGTTACTAAACC+CGG | 0.577540 | 5_1:-14885319 | Msa0719510:CDS |
| TTAGAGAAGAAGCACAACAT+AGG | 0.578368 | 5_1:-14886668 | None:intergenic |
| GCGAACCAGAAGAAAGATCC+GGG | 0.578672 | 5_1:+14885301 | None:intergenic |
| TGAACCATTCACAAGCGTTG+AGG | 0.581430 | 5_1:+14881621 | None:intergenic |
| TATAGTATGTCCCTTTCAGA+AGG | 0.581848 | 5_1:+14882152 | None:intergenic |
| TGTTGCACAAGTTAGGGCAA+GGG | 0.583819 | 5_1:-14881480 | Msa0719510:CDS |
| ACTCGAATTGAGGGTACTCA+GGG | 0.588057 | 5_1:-14884193 | Msa0719510:intron |
| ATAATAGGGGAGATAATTGG+AGG | 0.588667 | 5_1:-14885581 | Msa0719510:CDS |
| TTCAAGATATTTAGGAACTG+TGG | 0.591645 | 5_1:+14883748 | None:intergenic |
| AGAATCTGGTCTATGGGGAA+AGG | 0.592126 | 5_1:-14884701 | Msa0719510:intron |
| GCTCTGAATTTCACATCTAG+AGG | 0.592367 | 5_1:+14885435 | None:intergenic |
| GGCTTAGAAGCAACATTCGA+AGG | 0.592724 | 5_1:+14885249 | None:intergenic |
| GTGTAATAGTAGTAGTGACA+TGG | 0.593722 | 5_1:+14886589 | None:intergenic |
| CATATTCACGTGTCGCTGCA+GGG | 0.596003 | 5_1:+14882824 | None:intergenic |
| AGTTAAGCAAATTATGAAAG+CGG | 0.598451 | 5_1:-14884866 | Msa0719510:CDS |
| GAGGATAGGGTAGAGAGAAG+AGG | 0.598813 | 5_1:+14883813 | None:intergenic |
| TGAAAGGACTCAGAGGAAAG+AGG | 0.599318 | 5_1:-14885178 | Msa0719510:CDS |
| CACCACTAGTCGAAGAAGTG+TGG | 0.599546 | 5_1:-14882801 | Msa0719510:CDS |
| AAGGAGTGTCTTTGAAACAA+GGG | 0.599710 | 5_1:+14881699 | None:intergenic |
| CTTAGCACTGATGCTAGTAA+CGG | 0.601560 | 5_1:-14884255 | Msa0719510:CDS |
| ACGACTATGAACCTTCTGAA+AGG | 0.605948 | 5_1:-14882163 | Msa0719510:CDS |
| GTTTGAAGATGTTAGAGCAG+TGG | 0.606106 | 5_1:-14881846 | Msa0719510:CDS |
| GCATGAGCGAAGGTTGCAAG+TGG | 0.608881 | 5_1:-14881877 | Msa0719510:CDS |
| TCTGATCTTTAAATCTAAGG+TGG | 0.609023 | 5_1:+14886429 | None:intergenic |
| AAAGATATGGATCATAATAG+GGG | 0.609084 | 5_1:-14885594 | Msa0719510:exon |
| CTCATAAGGGTGAATGCCAA+GGG | 0.609756 | 5_1:-14881899 | Msa0719510:CDS |
| GCATCTATTCTCTCAACCCA+AGG | 0.609797 | 5_1:-14882909 | Msa0719510:CDS |
| AAGCCATACCTGCTTAAACA+TGG | 0.609945 | 5_1:+14883670 | None:intergenic |
| AATGCCAAGGGCATGAGCGA+AGG | 0.610410 | 5_1:-14881887 | Msa0719510:CDS |
| TTTCCTCTGAGTCCTTTCAA+CGG | 0.611134 | 5_1:+14885182 | None:intergenic |
| GGGACATACTATATGCAGAA+GGG | 0.611389 | 5_1:-14882142 | Msa0719510:CDS |
| ACCGAAGCCGGTGAAGCTGA+AGG | 0.614449 | 5_1:+14885279 | None:intergenic |
| GCAATGGGATCAATGCCTGA+AGG | 0.617810 | 5_1:-14884991 | Msa0719510:CDS |
| GGACATACTATATGCAGAAG+GGG | 0.618757 | 5_1:-14882141 | Msa0719510:CDS |
| GTCTCCTAATCATAGTCCAA+GGG | 0.620517 | 5_1:-14885364 | Msa0719510:CDS |
| ATGGTAATAATTGGGAAAGG+AGG | 0.623968 | 5_1:-14881074 | Msa0719510:three_prime_UTR |
| TATTAACATCTTAACAATGG+GGG | 0.629113 | 5_1:-14886624 | Msa0719510:five_prime_UTR |
| AGTACTCCGCAACATCTGGA+AGG | 0.629530 | 5_1:+14882728 | None:intergenic |
| GCACCAGACAGCAATGGCAG+CGG | 0.631434 | 5_1:-14881782 | Msa0719510:CDS |
| TGTAATAGTAGTAGTGACAT+GGG | 0.635871 | 5_1:+14886590 | None:intergenic |
| AGGGACATACTATATGCAGA+AGG | 0.636022 | 5_1:-14882143 | Msa0719510:CDS |
| GACAAAGAATCTGGTCTATG+GGG | 0.638895 | 5_1:-14884706 | Msa0719510:CDS |
| ATTTACTGATCAAGAGCTGG+AGG | 0.639867 | 5_1:-14883432 | Msa0719510:CDS |
| TTATGATGATGGTCGTTACG+AGG | 0.640902 | 5_1:-14883979 | Msa0719510:CDS |
| GTTTCTAGAATGAATGGACA+AGG | 0.641804 | 5_1:-14883326 | Msa0719510:CDS |
| TATCTTGCACCAGACAGCAA+TGG | 0.641825 | 5_1:-14881788 | Msa0719510:CDS |
| GATGGTCGTTACGAGGAGGA+AGG | 0.643902 | 5_1:-14883972 | Msa0719510:CDS |
| TCTGTAATTGAATCCTCAGG+TGG | 0.650948 | 5_1:+14881374 | None:intergenic |
| CGGTGATTAATGAGGCGAAG+AGG | 0.653038 | 5_1:-14885227 | Msa0719510:CDS |
| TCGTCAGGAACAGAAGCACC+CGG | 0.654089 | 5_1:+14885534 | None:intergenic |
| TAATAGGGGAGATAATTGGA+GGG | 0.655104 | 5_1:-14885580 | Msa0719510:CDS |
| TGATGATGGTCGTTACGAGG+AGG | 0.655963 | 5_1:-14883976 | Msa0719510:CDS |
| ATTAGGAGACCCCGTCACAC+CGG | 0.657996 | 5_1:+14885377 | None:intergenic |
| CCGGCGTATCCGGAGTACGT+TGG | 0.658309 | 5_1:-14885138 | Msa0719510:CDS |
| TATGCAGAAGGGGTTACTCA+GGG | 0.660136 | 5_1:-14882131 | Msa0719510:CDS |
| CCAGGCTTCAGCTTGCGTGG+AGG | 0.664286 | 5_1:+14884742 | None:intergenic |
| GGTACTTCATAAGAAACCGG+TGG | 0.665395 | 5_1:+14885468 | None:intergenic |
| GAAATTGGGGAAATATTCGA+GGG | 0.668473 | 5_1:-14884917 | Msa0719510:CDS |
| GATCCATGAGGCTGTCCATG+AGG | 0.673737 | 5_1:+14883794 | None:intergenic |
| GCCTCGTCTCTTGATCCATG+AGG | 0.673748 | 5_1:+14883782 | None:intergenic |
| CATGAGCGAAGGTTGCAAGT+GGG | 0.675143 | 5_1:-14881876 | Msa0719510:CDS |
| CCAACGTACTCCGGATACGC+CGG | 0.683136 | 5_1:+14885138 | None:intergenic |
| ACCCAAAAGTGAGTATCACG+TGG | 0.685386 | 5_1:+14884002 | None:intergenic |
| AACATGCAGATACACGACAA+AGG | 0.688596 | 5_1:+14881168 | None:intergenic |
| TTATTAACATCTTAACAATG+GGG | 0.697625 | 5_1:-14886625 | Msa0719510:five_prime_UTR |
| ACACCGGAAATACGAGACAT+CGG | 0.699999 | 5_1:+14885393 | None:intergenic |
| GCCTCATGGATCAAGAGACG+AGG | 0.704715 | 5_1:-14883783 | Msa0719510:CDS |
| AAATTACTATGGTCCACCTG+AGG | 0.707677 | 5_1:-14881387 | Msa0719510:CDS |
| AAGGACTCAGAGGAAAGAGG+TGG | 0.708006 | 5_1:-14885175 | Msa0719510:CDS |
| ATACCGTTGAAAGGACTCAG+AGG | 0.712232 | 5_1:-14885185 | Msa0719510:CDS |
| CCTGGACATTATAGCCACTG+GGG | 0.716191 | 5_1:-14882863 | Msa0719510:CDS |
| TGCTAGTAACGGGAACACTG+AGG | 0.725800 | 5_1:-14884244 | Msa0719510:CDS |
| GAATGCATCTAAATCCCCAG+TGG | 0.756546 | 5_1:+14882849 | None:intergenic |
| TCAGGAACAGAAGCACCCGG+CGG | 0.801290 | 5_1:+14885537 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATATTATCTTTTTCTT+TGG | - | chr5_1:14881378-14881397 | Msa0719510:CDS | 10.0% |
| !! | ATTATTAACATCTTAACAAT+GGG | - | chr5_1:14881085-14881104 | Msa0719510:three_prime_UTR | 15.0% |
| !!! | GTTTCTTAATTAATTTTCAT+AGG | - | chr5_1:14881439-14881458 | Msa0719510:CDS | 15.0% |
| !! | TATTAATTAAACAAAGTAGT+TGG | - | chr5_1:14881466-14881485 | Msa0719510:CDS | 15.0% |
| !! | TGTTAATACTATAATTCAAA+AGG | - | chr5_1:14881546-14881565 | Msa0719510:CDS | 15.0% |
| !! | AATAAACAAAATTCAAATCA+AGG | + | chr5_1:14881694-14881713 | None:intergenic | 15.0% |
| !!! | AGTCAATTTTTATATGATTT+TGG | - | chr5_1:14881715-14881734 | Msa0719510:CDS | 15.0% |
| !! | ATCAATGTTAAATATATTCA+AGG | + | chr5_1:14881929-14881948 | None:intergenic | 15.0% |
| !!! | TTATTTAGTTACCATTTTTT+TGG | - | chr5_1:14881995-14882014 | Msa0719510:intron | 15.0% |
| !!! | ATTTTTTTGGATATTTTAGA+GGG | - | chr5_1:14882008-14882027 | Msa0719510:intron | 15.0% |
| !! | ATTGTTAATATGTACTTAAT+GGG | + | chr5_1:14885767-14885786 | None:intergenic | 15.0% |
| !! | TATTGTTAATATGTACTTAA+TGG | + | chr5_1:14885768-14885787 | None:intergenic | 15.0% |
| !! | GATTATTAACATCTTAACAA+TGG | - | chr5_1:14881084-14881103 | Msa0719510:three_prime_UTR | 20.0% |
| !! | TTATTAACATCTTAACAATG+GGG | - | chr5_1:14881086-14881105 | Msa0719510:three_prime_UTR | 20.0% |
| !!! | CTTAATTAATTTTCATAGGA+TGG | - | chr5_1:14881443-14881462 | Msa0719510:CDS | 20.0% |
| !!! | TTACTATATAAAGTGGTTTT+AGG | + | chr5_1:14881888-14881907 | None:intergenic | 20.0% |
| !!! | AATTGTGTTACTATATAAAG+TGG | + | chr5_1:14881895-14881914 | None:intergenic | 20.0% |
| !! | AAATATATTCAAGGAAAAAG+AGG | + | chr5_1:14881920-14881939 | None:intergenic | 20.0% |
| !!! | CTCTAAAATATCCAAAAAAA+TGG | + | chr5_1:14882009-14882028 | None:intergenic | 20.0% |
| !!! | CATTTTTTTGGATATTTTAG+AGG | - | chr5_1:14882007-14882026 | Msa0719510:intron | 20.0% |
| !!! | TTTAACAATTTGAAACATTG+AGG | - | chr5_1:14882070-14882089 | Msa0719510:CDS | 20.0% |
| !!! | AGAAAATAAGAGTTTGTTAT+AGG | - | chr5_1:14882619-14882638 | Msa0719510:intron | 20.0% |
| !!! | TATGATTTTGGAGATAAAAT+TGG | + | chr5_1:14883129-14883148 | None:intergenic | 20.0% |
| !!! | ATAAGTCAAACTTATGATTT+TGG | + | chr5_1:14883141-14883160 | None:intergenic | 20.0% |
| !!! | TTTGCCACTATTTTAATATT+CGG | - | chr5_1:14883597-14883616 | Msa0719510:intron | 20.0% |
| !! | TAATCCGAATATTAAAATAG+TGG | + | chr5_1:14883604-14883623 | None:intergenic | 20.0% |
| !! | TCCTTATCATTATCATATTT+CGG | - | chr5_1:14883624-14883643 | Msa0719510:intron | 20.0% |
| !! | AACTGAAAATTCAAAGAAAA+AGG | + | chr5_1:14883673-14883692 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTGAATTTTCAGT+TGG | - | chr5_1:14883672-14883691 | Msa0719510:intron | 20.0% |
| !!! | TTTTTCTGTTCAAGATATTT+AGG | + | chr5_1:14883974-14883993 | None:intergenic | 20.0% |
| !! | TTAATGTTCAGAATGAATAA+TGG | + | chr5_1:14885094-14885113 | None:intergenic | 20.0% |
| !! | AATTTACAGATGCTATAATT+AGG | - | chr5_1:14885114-14885133 | Msa0719510:CDS | 20.0% |
| !! | ATTTACAGATGCTATAATTA+GGG | - | chr5_1:14885115-14885134 | Msa0719510:CDS | 20.0% |
| !! | TTGTTAAGAACTAGTATTAA+AGG | + | chr5_1:14886034-14886053 | None:intergenic | 20.0% |
| !!! | ACTTTTACTATGGTAATAAT+TGG | - | chr5_1:14886628-14886647 | Msa0719510:five_prime_UTR | 20.0% |
| !!! | CTTTTACTATGGTAATAATT+GGG | - | chr5_1:14886629-14886648 | Msa0719510:five_prime_UTR | 20.0% |
| ! | TATTAACATCTTAACAATGG+GGG | - | chr5_1:14881087-14881106 | Msa0719510:three_prime_UTR | 25.0% |
| !!! | TATTGCTTTTGAAGTTGAAT+AGG | + | chr5_1:14881262-14881281 | None:intergenic | 25.0% |
| ! | GAATCTGATCTTTAAATCTA+AGG | + | chr5_1:14881288-14881307 | None:intergenic | 25.0% |
| ! | TAAGAAACATACCAAAATGT+TGG | + | chr5_1:14881427-14881446 | None:intergenic | 25.0% |
| ! | TCAAAAACAGACAAAAACAA+AGG | + | chr5_1:14881601-14881620 | None:intergenic | 25.0% |
| ! | ATAATGCTATTCAACTATGA+AGG | - | chr5_1:14881782-14881801 | Msa0719510:CDS | 25.0% |
| ! | CAAATTTCAATGTTTGATTG+CGG | - | chr5_1:14881809-14881828 | Msa0719510:CDS | 25.0% |
| !!! | TATAAAGTGGTTTTAGGTTT+TGG | + | chr5_1:14881882-14881901 | None:intergenic | 25.0% |
| ! | ACAAAGATATGGATCATAAT+AGG | - | chr5_1:14882115-14882134 | Msa0719510:CDS | 25.0% |
| ! | CAAAGATATGGATCATAATA+GGG | - | chr5_1:14882116-14882135 | Msa0719510:CDS | 25.0% |
| ! | AAAGATATGGATCATAATAG+GGG | - | chr5_1:14882117-14882136 | Msa0719510:CDS | 25.0% |
| !! | TAACTTTTAATACCGTTGAA+AGG | - | chr5_1:14882517-14882536 | Msa0719510:intron | 25.0% |
| !!! | ATAATTTGCTTAACTTCTAG+AGG | + | chr5_1:14882840-14882859 | None:intergenic | 25.0% |
| ! | AGTTAAGCAAATTATGAAAG+CGG | - | chr5_1:14882845-14882864 | Msa0719510:CDS | 25.0% |
| ! | AATGAAAGCAGAAATATTCT+CGG | + | chr5_1:14883057-14883076 | None:intergenic | 25.0% |
| !! | TGGAATATTATGTTTTCAGT+TGG | - | chr5_1:14883087-14883106 | Msa0719510:intron | 25.0% |
| !! | GGAATATTATGTTTTCAGTT+GGG | - | chr5_1:14883088-14883107 | Msa0719510:intron | 25.0% |
| ! | AGAATATAAGAGGAAACATT+TGG | - | chr5_1:14883767-14883786 | Msa0719510:CDS | 25.0% |
| ! | GAATATAAGAGGAAACATTT+GGG | - | chr5_1:14883768-14883787 | Msa0719510:CDS | 25.0% |
| ! | GTATTCACTTAAATACTTGT+AGG | - | chr5_1:14883796-14883815 | Msa0719510:CDS | 25.0% |
| !! | TATCTTAGCATTTTACTTGA+TGG | - | chr5_1:14884337-14884356 | Msa0719510:intron | 25.0% |
| !! | TCTGATGATGAATATAGATT+CGG | - | chr5_1:14884646-14884665 | Msa0719510:intron | 25.0% |
| !! | TAATGATATCAGAAACCTTT+TGG | - | chr5_1:14884717-14884736 | Msa0719510:CDS | 25.0% |
| ! | CCTGAATAAAGATTGAAATA+GGG | + | chr5_1:14884750-14884769 | None:intergenic | 25.0% |
| ! | ACCTGAATAAAGATTGAAAT+AGG | + | chr5_1:14884751-14884770 | None:intergenic | 25.0% |
| ! | ATACAATCTATAAGCTATAC+TGG | + | chr5_1:14885269-14885288 | None:intergenic | 25.0% |
| ! | AGATATTCAATATGCTTACT+TGG | + | chr5_1:14885701-14885720 | None:intergenic | 25.0% |
| ! | AGTAAGCATATTGAATATCT+AGG | - | chr5_1:14885701-14885720 | Msa0719510:intron | 25.0% |
| ! | ATGTACTTAATGGGAAAAAA+TGG | + | chr5_1:14885758-14885777 | None:intergenic | 25.0% |
| ! | CAATATTTCTTTGATATCTC+AGG | - | chr5_1:14885783-14885802 | Msa0719510:intron | 25.0% |
| ! | ACATAAAAGAGGTTCTTAAA+TGG | - | chr5_1:14886284-14886303 | Msa0719510:intron | 25.0% |
| ! | CATAAAAGAGGTTCTTAAAT+GGG | - | chr5_1:14886285-14886304 | Msa0719510:intron | 25.0% |
| ! | GAGAAAGATGAAAATTACTA+TGG | - | chr5_1:14886313-14886332 | Msa0719510:intron | 25.0% |
| ! | ACTAAAAAGTGAAAAGTTGT+TGG | - | chr5_1:14886498-14886517 | Msa0719510:five_prime_UTR | 25.0% |
| !!! | GGAAACATTTACTTTTACTA+TGG | - | chr5_1:14886618-14886637 | Msa0719510:five_prime_UTR | 25.0% |
| TGTAATAGTAGTAGTGACAT+GGG | + | chr5_1:14881124-14881143 | None:intergenic | 30.0% | |
| AATGAGAAAGAGAAAAATGG+TGG | + | chr5_1:14881193-14881212 | None:intergenic | 30.0% | |
| GGAAATGAGAAAGAGAAAAA+TGG | + | chr5_1:14881196-14881215 | None:intergenic | 30.0% | |
| TTCCTTTATCAAATGTGTAG+TGG | - | chr5_1:14881212-14881231 | Msa0719510:three_prime_UTR | 30.0% | |
| TCCTTTATCAAATGTGTAGT+GGG | - | chr5_1:14881213-14881232 | Msa0719510:three_prime_UTR | 30.0% | |
| TCTGATCTTTAAATCTAAGG+TGG | + | chr5_1:14881285-14881304 | None:intergenic | 30.0% | |
| ! | CAGATTCATCCTTTTATGTA+AGG | - | chr5_1:14881301-14881320 | Msa0719510:three_prime_UTR | 30.0% |
| ! | AGCTGAAAATTCCAACATTT+TGG | - | chr5_1:14881413-14881432 | Msa0719510:CDS | 30.0% |
| !! | GAAACATTGAGGTTTTTAAG+TGG | - | chr5_1:14882081-14882100 | Msa0719510:CDS | 30.0% |
| !! | TGTTGGTGATTACAAAGATA+TGG | - | chr5_1:14882104-14882123 | Msa0719510:CDS | 30.0% |
| ATCATAATAGGGGAGATAAT+TGG | - | chr5_1:14882127-14882146 | Msa0719510:CDS | 30.0% | |
| ACGGTATTAAAAGTTACAAC+AGG | + | chr5_1:14882513-14882532 | None:intergenic | 30.0% | |
| !! | ATAAGAGTTTGTTATAGGTG+TGG | - | chr5_1:14882624-14882643 | Msa0719510:intron | 30.0% |
| ! | TTTGTTATAGGTGTGGTAAA+GGG | - | chr5_1:14882631-14882650 | Msa0719510:intron | 30.0% |
| !! | TGCTTTCATTTTTGCATGTA+TGG | - | chr5_1:14883067-14883086 | Msa0719510:intron | 30.0% |
| TTTATTTGTAATCAGAGAGC+AGG | - | chr5_1:14883351-14883370 | Msa0719510:CDS | 30.0% | |
| TTTGAACTAATGATTCTGTC+AGG | + | chr5_1:14883417-14883436 | None:intergenic | 30.0% | |
| AGTTCAAACTTGAATTTCTC+TGG | - | chr5_1:14883429-14883448 | Msa0719510:CDS | 30.0% | |
| GTTCAAACTTGAATTTCTCT+GGG | - | chr5_1:14883430-14883449 | Msa0719510:CDS | 30.0% | |
| AGATTACAAAACTCGAATTG+AGG | - | chr5_1:14883508-14883527 | Msa0719510:intron | 30.0% | |
| GATTACAAAACTCGAATTGA+GGG | - | chr5_1:14883509-14883528 | Msa0719510:intron | 30.0% | |
| TAGTGGCAAAAAAACTCTAT+TGG | + | chr5_1:14883587-14883606 | None:intergenic | 30.0% | |
| ! | GCCGAAATATGATAATGATA+AGG | + | chr5_1:14883628-14883647 | None:intergenic | 30.0% |
| GAAGGTCAAAAGAATATAAG+AGG | - | chr5_1:14883757-14883776 | Msa0719510:CDS | 30.0% | |
| ! | TTACGAATTTTTCTCATGAC+AGG | - | chr5_1:14883853-14883872 | Msa0719510:intron | 30.0% |
| TTCAAGATATTTAGGAACTG+TGG | + | chr5_1:14883966-14883985 | None:intergenic | 30.0% | |
| TTCTTCTTCTTGGAATTCAA+GGG | - | chr5_1:14884005-14884024 | Msa0719510:CDS | 30.0% | |
| TATAACATGATTCTCTTCTG+CGG | - | chr5_1:14884211-14884230 | Msa0719510:CDS | 30.0% | |
| TTTGTTCCCGTACAAAAATT+TGG | + | chr5_1:14884260-14884279 | None:intergenic | 30.0% | |
| ATGTTTCGAATGCATGTTTA+GGG | + | chr5_1:14884570-14884589 | None:intergenic | 30.0% | |
| ! | ATGATGAATATAGATTCGGT+AGG | - | chr5_1:14884650-14884669 | Msa0719510:intron | 30.0% |
| AGGTGTTAATGTTAATTCTG+CGG | - | chr5_1:14884670-14884689 | Msa0719510:intron | 30.0% | |
| AAATAGGGTAAAACACCAAA+AGG | + | chr5_1:14884735-14884754 | None:intergenic | 30.0% | |
| CCCTATTTCAATCTTTATTC+AGG | - | chr5_1:14884747-14884766 | Msa0719510:CDS | 30.0% | |
| AATCTTTATTCAGGTAGCAA+TGG | - | chr5_1:14884756-14884775 | Msa0719510:CDS | 30.0% | |
| ! | AAGCTCATCTTTTCTTTTGA+AGG | + | chr5_1:14884958-14884977 | None:intergenic | 30.0% |
| TGATTAGATAAGCAATTACC+CGG | + | chr5_1:14885016-14885035 | None:intergenic | 30.0% | |
| !! | CTGTAATTTTAAGAAGACTC+CGG | + | chr5_1:14885048-14885067 | None:intergenic | 30.0% |
| TAATTAGGGATGGTTTAGAT+TGG | - | chr5_1:14885129-14885148 | Msa0719510:CDS | 30.0% | |
| CAATAAACTTAGGTCATGTT+TGG | + | chr5_1:14885393-14885412 | None:intergenic | 30.0% | |
| CAAACATGACCTAAGTTTAT+TGG | - | chr5_1:14885391-14885410 | Msa0719510:CDS | 30.0% | |
| GCTATGCATCATAATAGAAA+CGG | - | chr5_1:14885413-14885432 | Msa0719510:CDS | 30.0% | |
| ! | AATGTTTTCATTTTCAGCCT+TGG | - | chr5_1:14885452-14885471 | Msa0719510:CDS | 30.0% |
| ! | ATGTTTTCATTTTCAGCCTT+GGG | - | chr5_1:14885453-14885472 | Msa0719510:CDS | 30.0% |
| !! | TGCTTTGAATCATCTTGTTT+TGG | + | chr5_1:14885964-14885983 | None:intergenic | 30.0% |
| AAACAAGATGATTCAAAGCA+AGG | - | chr5_1:14885964-14885983 | Msa0719510:intron | 30.0% | |
| AAAAAGTTTCTTTCCTGTGA+TGG | + | chr5_1:14886212-14886231 | None:intergenic | 30.0% | |
| ! | AACTTTTTGTTGCACAAGTT+AGG | - | chr5_1:14886224-14886243 | Msa0719510:intron | 30.0% |
| ! | ACTTTTTGTTGCACAAGTTA+GGG | - | chr5_1:14886225-14886244 | Msa0719510:intron | 30.0% |
| AGCATTCAAGTACATAAAAG+AGG | - | chr5_1:14886273-14886292 | Msa0719510:intron | 30.0% | |
| ATATCTGTAATTGAATCCTC+AGG | + | chr5_1:14886343-14886362 | None:intergenic | 30.0% | |
| CAACCTCTTAATAGCAAAAT+AGG | + | chr5_1:14886424-14886443 | None:intergenic | 30.0% | |
| !!! | TTTTGCTATTAAGAGGTTGT+TGG | - | chr5_1:14886425-14886444 | Msa0719510:five_prime_UTR | 30.0% |
| TTGGAAAAAATGTAACATGC+TGG | - | chr5_1:14886444-14886463 | Msa0719510:five_prime_UTR | 30.0% | |
| !! | TTGTTGGTAGAGTTCTTTTT+AGG | - | chr5_1:14886514-14886533 | Msa0719510:five_prime_UTR | 30.0% |
| !!! | TGACGTTTTTTAAGACTTGT+TGG | - | chr5_1:14886597-14886616 | Msa0719510:five_prime_UTR | 30.0% |
| ACTATGGTAATAATTGGGAA+AGG | - | chr5_1:14886634-14886653 | Msa0719510:five_prime_UTR | 30.0% | |
| GTGTAATAGTAGTAGTGACA+TGG | + | chr5_1:14881125-14881144 | None:intergenic | 35.0% | |
| ACCCACTACACATTTGATAA+AGG | + | chr5_1:14881217-14881236 | None:intergenic | 35.0% | |
| ! | GAGAGTGTACCTTACATAAA+AGG | + | chr5_1:14881313-14881332 | None:intergenic | 35.0% |
| !! | TGGATATTTTAGAGGGAACA+AGG | - | chr5_1:14882015-14882034 | Msa0719510:intron | 35.0% |
| !!! | TTGAGGTTTTTAAGTGGTGT+TGG | - | chr5_1:14882087-14882106 | Msa0719510:CDS | 35.0% |
| ATAATAGGGGAGATAATTGG+AGG | - | chr5_1:14882130-14882149 | Msa0719510:CDS | 35.0% | |
| TAATAGGGGAGATAATTGGA+GGG | - | chr5_1:14882131-14882150 | Msa0719510:CDS | 35.0% | |
| TCAACAGCTTCGGAATATTT+AGG | - | chr5_1:14882219-14882238 | Msa0719510:intron | 35.0% | |
| TTCGGTACTTCATAAGAAAC+CGG | + | chr5_1:14882249-14882268 | None:intergenic | 35.0% | |
| !! | GTTTGTTATAGGTGTGGTAA+AGG | - | chr5_1:14882630-14882649 | Msa0719510:intron | 35.0% |
| TGAAATTGGGGAAATATTCG+AGG | - | chr5_1:14882793-14882812 | Msa0719510:CDS | 35.0% | |
| GAAATTGGGGAAATATTCGA+GGG | - | chr5_1:14882794-14882813 | Msa0719510:CDS | 35.0% | |
| TATTGGTACGACAAAGAATC+TGG | - | chr5_1:14882996-14883015 | Msa0719510:intron | 35.0% | |
| AGTTCTGCTATAGTCTCTAT+TGG | + | chr5_1:14883257-14883276 | None:intergenic | 35.0% | |
| ! | CTTCTGTCGTTTCATTTGAT+AGG | - | chr5_1:14883380-14883399 | Msa0719510:CDS | 35.0% |
| ! | TGTCGTTTCATTTGATAGGA+AGG | - | chr5_1:14883384-14883403 | Msa0719510:CDS | 35.0% |
| GTCGTTTCATTTGATAGGAA+GGG | - | chr5_1:14883385-14883404 | Msa0719510:CDS | 35.0% | |
| TCGTTTCATTTGATAGGAAG+GGG | - | chr5_1:14883386-14883405 | Msa0719510:CDS | 35.0% | |
| AACACTGAGGTTTACATCAA+TGG | - | chr5_1:14883480-14883499 | Msa0719510:intron | 35.0% | |
| !!! | CACTTTTGGGTTTATGATGA+TGG | - | chr5_1:14883721-14883740 | Msa0719510:CDS | 35.0% |
| CTTCTTCTTCTTGGAATTCA+AGG | - | chr5_1:14884004-14884023 | Msa0719510:CDS | 35.0% | |
| CAAATTTACTGATCAAGAGC+TGG | - | chr5_1:14884276-14884295 | Msa0719510:CDS | 35.0% | |
| !! | GTTTCTAGAATGAATGGACA+AGG | - | chr5_1:14884385-14884404 | Msa0719510:intron | 35.0% |
| CATGTTTCGAATGCATGTTT+AGG | + | chr5_1:14884571-14884590 | None:intergenic | 35.0% | |
| GGTGTTAATGTTAATTCTGC+GGG | - | chr5_1:14884671-14884690 | Msa0719510:intron | 35.0% | |
| TATCTAATCATCCTCGAAAC+CGG | - | chr5_1:14885026-14885045 | Msa0719510:CDS | 35.0% | |
| ACAGATGCTATAATTAGGGA+TGG | - | chr5_1:14885119-14885138 | Msa0719510:CDS | 35.0% | |
| GATGCATAGCCAATAAACTT+AGG | + | chr5_1:14885403-14885422 | None:intergenic | 35.0% | |
| ! | TGTTTTCATTTTCAGCCTTG+GGG | - | chr5_1:14885454-14885473 | Msa0719510:CDS | 35.0% |
| !!! | AATGTGCTCGCTTTTTTTTC+AGG | - | chr5_1:14885507-14885526 | Msa0719510:CDS | 35.0% |
| TATAGTATGTCCCTTTCAGA+AGG | + | chr5_1:14885562-14885581 | None:intergenic | 35.0% | |
| CTGTATAAGCTTCGAACTTT+GGG | + | chr5_1:14885648-14885667 | None:intergenic | 35.0% | |
| TCTGTATAAGCTTCGAACTT+TGG | + | chr5_1:14885649-14885668 | None:intergenic | 35.0% | |
| CAATATGCTTACTTGGTCAT+TGG | + | chr5_1:14885694-14885713 | None:intergenic | 35.0% | |
| CTTAATGGGAAAAAATGGTG+CGG | + | chr5_1:14885753-14885772 | None:intergenic | 35.0% | |
| !! | AAGGAGTGTCTTTGAAACAA+GGG | + | chr5_1:14886015-14886034 | None:intergenic | 35.0% |
| !! | AAAGGAGTGTCTTTGAAACA+AGG | + | chr5_1:14886016-14886035 | None:intergenic | 35.0% |
| TCTTCGAGGAAAAAATGAGA+AGG | - | chr5_1:14886062-14886081 | Msa0719510:intron | 35.0% | |
| !!! | TCGCCTATTTTGCTATTAAG+AGG | - | chr5_1:14886418-14886437 | Msa0719510:five_prime_UTR | 35.0% |
| ! | AAAAATGTAACATGCTGGCT+AGG | - | chr5_1:14886449-14886468 | Msa0719510:five_prime_UTR | 35.0% |
| ATGGTAATAATTGGGAAAGG+AGG | - | chr5_1:14886637-14886656 | Msa0719510:five_prime_UTR | 35.0% | |
| !! | GACTGTGACTTGTTCTTCAT+AGG | - | chr5_1:14881848-14881867 | Msa0719510:CDS | 40.0% |
| TCTTGACTACTCAACAGCTT+CGG | - | chr5_1:14882209-14882228 | Msa0719510:intron | 40.0% | |
| TTCGGAATATTTAGGTCCAC+CGG | - | chr5_1:14882227-14882246 | Msa0719510:intron | 40.0% | |
| ACATCTAGAGGCTCAACTTT+CGG | + | chr5_1:14882267-14882286 | None:intergenic | 40.0% | |
| ! | GCTCTGAATTTCACATCTAG+AGG | + | chr5_1:14882279-14882298 | None:intergenic | 40.0% |
| AAATACGAGACATCGGCAAA+GGG | + | chr5_1:14882314-14882333 | None:intergenic | 40.0% | |
| GTCTCCTAATCATAGTCCAA+GGG | - | chr5_1:14882347-14882366 | Msa0719510:intron | 40.0% | |
| ! | GGTTTCTGTGTTACTAAACC+CGG | - | chr5_1:14882392-14882411 | Msa0719510:intron | 40.0% |
| ! | TTCGAATGTTGCTTCTAAGC+CGG | - | chr5_1:14882464-14882483 | Msa0719510:intron | 40.0% |
| TTCTAAGCCGGTGATTAATG+AGG | - | chr5_1:14882476-14882495 | Msa0719510:intron | 40.0% | |
| TTTCCTCTGAGTCCTTTCAA+CGG | + | chr5_1:14882532-14882551 | None:intergenic | 40.0% | |
| CGCAAATGTGTAACATGCAT+TGG | - | chr5_1:14882744-14882763 | Msa0719510:CDS | 40.0% | |
| ! | GAATCGAAGCGTCTGAAATT+GGG | - | chr5_1:14882780-14882799 | Msa0719510:CDS | 40.0% |
| ! | AATCGAAGCGTCTGAAATTG+GGG | - | chr5_1:14882781-14882800 | Msa0719510:CDS | 40.0% |
| GAAAGCGGAGAAAGAATGTT+CGG | - | chr5_1:14882860-14882879 | Msa0719510:CDS | 40.0% | |
| AGTAAGTCTTCCATCTCATC+AGG | + | chr5_1:14882936-14882955 | None:intergenic | 40.0% | |
| GATGAGATGGAAGACTTACT+TGG | - | chr5_1:14882936-14882955 | Msa0719510:CDS | 40.0% | |
| TTGTCGTACCAATATCTACC+AGG | + | chr5_1:14882990-14883009 | None:intergenic | 40.0% | |
| ACGACAAAGAATCTGGTCTA+TGG | - | chr5_1:14883003-14883022 | Msa0719510:intron | 40.0% | |
| CGACAAAGAATCTGGTCTAT+GGG | - | chr5_1:14883004-14883023 | Msa0719510:intron | 40.0% | |
| GACAAAGAATCTGGTCTATG+GGG | - | chr5_1:14883005-14883024 | Msa0719510:intron | 40.0% | |
| !! | CTTAGCACTGATGCTAGTAA+CGG | - | chr5_1:14883456-14883475 | Msa0719510:CDS | 40.0% |
| !! | TTAGCACTGATGCTAGTAAC+GGG | - | chr5_1:14883457-14883476 | Msa0719510:CDS | 40.0% |
| TTCGGCATCATTGAACTCAA+TGG | - | chr5_1:14883642-14883661 | Msa0719510:intron | 40.0% | |
| !! | TCCACGTGATACTCACTTTT+GGG | - | chr5_1:14883708-14883727 | Msa0719510:CDS | 40.0% |
| !! | TTATGATGATGGTCGTTACG+AGG | - | chr5_1:14883732-14883751 | Msa0719510:CDS | 40.0% |
| AAGAGGAAACATTTGGGAGA+AGG | - | chr5_1:14883774-14883793 | Msa0719510:CDS | 40.0% | |
| ACTCAGAAGCTTCTTCTTCT+TGG | - | chr5_1:14883995-14884014 | Msa0719510:CDS | 40.0% | |
| AACTAGCACCATGTTTAAGC+AGG | - | chr5_1:14884033-14884052 | Msa0719510:intron | 40.0% | |
| AAGCCATACCTGCTTAAACA+TGG | + | chr5_1:14884044-14884063 | None:intergenic | 40.0% | |
| TGATCTTATGATTGCTGAGC+AGG | - | chr5_1:14884234-14884253 | Msa0719510:CDS | 40.0% | |
| ! | GAGCAGGCCAAATTTTTGTA+CGG | - | chr5_1:14884250-14884269 | Msa0719510:CDS | 40.0% |
| ! | AGCAGGCCAAATTTTTGTAC+GGG | - | chr5_1:14884251-14884270 | Msa0719510:CDS | 40.0% |
| ATTTACTGATCAAGAGCTGG+AGG | - | chr5_1:14884279-14884298 | Msa0719510:CDS | 40.0% | |
| !! | GAGGCTGTTTCTAGAATGAA+TGG | - | chr5_1:14884379-14884398 | Msa0719510:intron | 40.0% |
| ! | TCGAATGCATGTTTAGGGTT+AGG | + | chr5_1:14884565-14884584 | None:intergenic | 40.0% |
| TATAATGTCCAGGAGCCAAT+CGG | + | chr5_1:14884841-14884860 | None:intergenic | 40.0% | |
| TCTATAAGCTATACTGGAGC+TGG | + | chr5_1:14885263-14885282 | None:intergenic | 40.0% | |
| TCAATACCTTAATCTCCCCA+AGG | + | chr5_1:14885472-14885491 | None:intergenic | 40.0% | |
| ACGACTATGAACCTTCTGAA+AGG | - | chr5_1:14885548-14885567 | Msa0719510:CDS | 40.0% | |
| ! | CGACTATGAACCTTCTGAAA+GGG | - | chr5_1:14885549-14885568 | Msa0719510:CDS | 40.0% |
| AGGGACATACTATATGCAGA+AGG | - | chr5_1:14885568-14885587 | Msa0719510:CDS | 40.0% | |
| GGGACATACTATATGCAGAA+GGG | - | chr5_1:14885569-14885588 | Msa0719510:CDS | 40.0% | |
| GGACATACTATATGCAGAAG+GGG | - | chr5_1:14885570-14885589 | Msa0719510:CDS | 40.0% | |
| ATCTCAGGTACCAACTCATA+AGG | - | chr5_1:14885798-14885817 | Msa0719510:intron | 40.0% | |
| TCTCAGGTACCAACTCATAA+GGG | - | chr5_1:14885799-14885818 | Msa0719510:intron | 40.0% | |
| GTTTGAAGATGTTAGAGCAG+TGG | - | chr5_1:14885865-14885884 | Msa0719510:intron | 40.0% | |
| TAACTGATCGTAGTCGCTTA+GGG | + | chr5_1:14885903-14885922 | None:intergenic | 40.0% | |
| ATAACTGATCGTAGTCGCTT+AGG | + | chr5_1:14885904-14885923 | None:intergenic | 40.0% | |
| ! | CAAGGAGCTTTTCGAAACAA+TGG | - | chr5_1:14885982-14886001 | Msa0719510:intron | 40.0% |
| AAGCTTGATGTGCTAGTGAT+TGG | + | chr5_1:14886150-14886169 | None:intergenic | 40.0% | |
| !! | TTCCTGTGATGGATGCATAA+AGG | + | chr5_1:14886201-14886220 | None:intergenic | 40.0% |
| AAATTACTATGGTCCACCTG+AGG | - | chr5_1:14886324-14886343 | Msa0719510:intron | 40.0% | |
| TCTGTAATTGAATCCTCAGG+TGG | + | chr5_1:14886340-14886359 | None:intergenic | 40.0% | |
| AACATGCAGATACACGACAA+AGG | + | chr5_1:14886546-14886565 | None:intergenic | 40.0% | |
| ATCTGCATGTTTGCATTCTG+TGG | - | chr5_1:14886555-14886574 | Msa0719510:five_prime_UTR | 40.0% | |
| TTAACAATGGGGGCCTAAGT+GGG | - | chr5_1:14881097-14881116 | Msa0719510:three_prime_UTR | 45.0% | |
| !! | TCAAGATTAGAAGCGTCGTC+AGG | + | chr5_1:14882195-14882214 | None:intergenic | 45.0% |
| GGTACTTCATAAGAAACCGG+TGG | + | chr5_1:14882246-14882265 | None:intergenic | 45.0% | |
| GAAATACGAGACATCGGCAA+AGG | + | chr5_1:14882315-14882334 | None:intergenic | 45.0% | |
| TTGCCGATGTCTCGTATTTC+CGG | - | chr5_1:14882315-14882334 | Msa0719510:intron | 45.0% | |
| ACACCGGAAATACGAGACAT+CGG | + | chr5_1:14882321-14882340 | None:intergenic | 45.0% | |
| GGTCTCCTAATCATAGTCCA+AGG | - | chr5_1:14882346-14882365 | Msa0719510:intron | 45.0% | |
| GACACCCTTGGACTATGATT+AGG | + | chr5_1:14882354-14882373 | None:intergenic | 45.0% | |
| !! | AATCATAGTCCAAGGGTGTC+TGG | - | chr5_1:14882354-14882373 | Msa0719510:intron | 45.0% |
| GTCTGGAAGTTCAGAATCTG+TGG | - | chr5_1:14882371-14882390 | Msa0719510:intron | 45.0% | |
| CTAAACCCGGATCTTTCTTC+TGG | - | chr5_1:14882405-14882424 | Msa0719510:intron | 45.0% | |
| GAAGGATTATGAACCGAAGC+CGG | + | chr5_1:14882447-14882466 | None:intergenic | 45.0% | |
| GGCTTAGAAGCAACATTCGA+AGG | + | chr5_1:14882465-14882484 | None:intergenic | 45.0% | |
| CTCTTCGCCTCATTAATCAC+CGG | + | chr5_1:14882486-14882505 | None:intergenic | 45.0% | |
| ATACCGTTGAAAGGACTCAG+AGG | - | chr5_1:14882526-14882545 | Msa0719510:intron | 45.0% | |
| TGAAAGGACTCAGAGGAAAG+AGG | - | chr5_1:14882533-14882552 | Msa0719510:intron | 45.0% | |
| ATAGGTGTGGTAAAGGGAAG+TGG | - | chr5_1:14882637-14882656 | Msa0719510:intron | 45.0% | |
| TAGGTGTGGTAAAGGGAAGT+GGG | - | chr5_1:14882638-14882657 | Msa0719510:intron | 45.0% | |
| CAATGGGATCAATGCCTGAA+GGG | - | chr5_1:14882721-14882740 | Msa0719510:CDS | 45.0% | |
| ! | AGACGCTTCGATTCGTCAAT+AGG | + | chr5_1:14882774-14882793 | None:intergenic | 45.0% |
| ! | CGAATCGAAGCGTCTGAAAT+TGG | - | chr5_1:14882779-14882798 | Msa0719510:CDS | 45.0% |
| ! | TTCTAGAGGACTCAACAGTC+GGG | + | chr5_1:14882826-14882845 | None:intergenic | 45.0% |
| ! | CTTCTAGAGGACTCAACAGT+CGG | + | chr5_1:14882827-14882846 | None:intergenic | 45.0% |
| AGCTGAAGCCTGGTAGATAT+TGG | - | chr5_1:14882979-14882998 | Msa0719510:intron | 45.0% | |
| AGAATCTGGTCTATGGGGAA+AGG | - | chr5_1:14883010-14883029 | Msa0719510:intron | 45.0% | |
| !! | AACTCGAATTGAGGGTACTC+AGG | - | chr5_1:14883517-14883536 | Msa0719510:intron | 45.0% |
| !! | ACTCGAATTGAGGGTACTCA+GGG | - | chr5_1:14883518-14883537 | Msa0719510:intron | 45.0% |
| ! | GTCCACGTGATACTCACTTT+TGG | - | chr5_1:14883707-14883726 | Msa0719510:CDS | 45.0% |
| ACCCAAAAGTGAGTATCACG+TGG | + | chr5_1:14883712-14883731 | None:intergenic | 45.0% | |
| AGGATAGGGTAGAGAGAAGA+GGG | + | chr5_1:14883900-14883919 | None:intergenic | 45.0% | |
| TTCTCTCTACCCTATCCTCA+TGG | - | chr5_1:14883902-14883921 | Msa0719510:intron | 45.0% | |
| CTTCTTGGAATTCAAGGGTC+TGG | - | chr5_1:14884010-14884029 | Msa0719510:CDS | 45.0% | |
| GCACCATGTTTAAGCAGGTA+TGG | - | chr5_1:14884038-14884057 | Msa0719510:intron | 45.0% | |
| !!! | TGGAAGAGAGCGTTTTGAAG+AGG | - | chr5_1:14884357-14884376 | Msa0719510:intron | 45.0% |
| !!! | AAGAGAGCGTTTTGAAGAGG+AGG | - | chr5_1:14884360-14884379 | Msa0719510:intron | 45.0% |
| AGGTTCTCCTGCTCACATTA+TGG | - | chr5_1:14884405-14884424 | Msa0719510:intron | 45.0% | |
| TCGAAACATGCATGCGTACA+TGG | - | chr5_1:14884581-14884600 | Msa0719510:intron | 45.0% | |
| GCATCTATTCTCTCAACCCA+AGG | - | chr5_1:14884802-14884821 | Msa0719510:CDS | 45.0% | |
| CGGAAAAATGCTTCAGCCTT+GGG | + | chr5_1:14884821-14884840 | None:intergenic | 45.0% | |
| TCGGAAAAATGCTTCAGCCT+TGG | + | chr5_1:14884822-14884841 | None:intergenic | 45.0% | |
| !! | GGCTGAAGCATTTTTCCGAT+TGG | - | chr5_1:14884823-14884842 | Msa0719510:CDS | 45.0% |
| TCCTGGACATTATAGCCACT+GGG | - | chr5_1:14884847-14884866 | Msa0719510:CDS | 45.0% | |
| GAATGCATCTAAATCCCCAG+TGG | + | chr5_1:14884865-14884884 | None:intergenic | 45.0% | |
| TTCCACACTTCTTCGACTAG+TGG | + | chr5_1:14884915-14884934 | None:intergenic | 45.0% | |
| TTGAAGGTCACTTGTATCGC+TGG | + | chr5_1:14884942-14884961 | None:intergenic | 45.0% | |
| TCACTTCCTTCCAGATGTTG+CGG | - | chr5_1:14884977-14884996 | Msa0719510:CDS | 45.0% | |
| !! | AAGAAGTACTCCGCAACATC+TGG | + | chr5_1:14884990-14885009 | None:intergenic | 45.0% |
| ! | TTGCGGAGTACTTCTTAAGC+CGG | - | chr5_1:14884994-14885013 | Msa0719510:CDS | 45.0% |
| TTAAGAAGACTCCGGTTTCG+AGG | + | chr5_1:14885040-14885059 | None:intergenic | 45.0% | |
| TTTCAGCCTTGGGGAGATTA+AGG | - | chr5_1:14885463-14885482 | Msa0719510:CDS | 45.0% | |
| ATATGCAGAAGGGGTTACTC+AGG | - | chr5_1:14885579-14885598 | Msa0719510:CDS | 45.0% | |
| TATGCAGAAGGGGTTACTCA+GGG | - | chr5_1:14885580-14885599 | Msa0719510:CDS | 45.0% | |
| GGTTACTCAGGGAAATGGTT+TGG | - | chr5_1:14885591-14885610 | Msa0719510:CDS | 45.0% | |
| !! | GGGAAATGGTTTGGCTTTCA+TGG | - | chr5_1:14885600-14885619 | Msa0719510:exon | 45.0% |
| TTGGTTGCAACTGAGCATCA+AGG | + | chr5_1:14885675-14885694 | None:intergenic | 45.0% | |
| TGGCATTCACCCTTATGAGT+TGG | + | chr5_1:14885811-14885830 | None:intergenic | 45.0% | |
| ACTCATAAGGGTGAATGCCA+AGG | - | chr5_1:14885811-14885830 | Msa0719510:intron | 45.0% | |
| CTCATAAGGGTGAATGCCAA+GGG | - | chr5_1:14885812-14885831 | Msa0719510:intron | 45.0% | |
| TATCTTGCACCAGACAGCAA+TGG | - | chr5_1:14885923-14885942 | Msa0719510:intron | 45.0% | |
| TATCCCTCAACGCTTGTGAA+TGG | - | chr5_1:14886086-14886105 | Msa0719510:intron | 45.0% | |
| !! | GAACCATTCACAAGCGTTGA+GGG | + | chr5_1:14886092-14886111 | None:intergenic | 45.0% |
| ! | TGAACCATTCACAAGCGTTG+AGG | + | chr5_1:14886093-14886112 | None:intergenic | 45.0% |
| GACCTTTATGCATCCATCAC+AGG | - | chr5_1:14886196-14886215 | Msa0719510:intron | 45.0% | |
| TTGTTGCACAAGTTAGGGCA+AGG | - | chr5_1:14886230-14886249 | Msa0719510:intron | 45.0% | |
| TGTTGCACAAGTTAGGGCAA+GGG | - | chr5_1:14886231-14886250 | Msa0719510:intron | 45.0% | |
| !! | TCTGTGGAAGCACTGTTCAT+TGG | - | chr5_1:14886571-14886590 | Msa0719510:five_prime_UTR | 45.0% |
| CTTAACAATGGGGGCCTAAG+TGG | - | chr5_1:14881096-14881115 | Msa0719510:three_prime_UTR | 50.0% | |
| TAGTGACATGGGTCCCACTT+AGG | + | chr5_1:14881113-14881132 | None:intergenic | 50.0% | |
| GGGAGATAATTGGAGGGAAG+TGG | - | chr5_1:14882137-14882156 | Msa0719510:CDS | 50.0% | |
| GTCTCGTATTTCCGGTGTGA+CGG | - | chr5_1:14882323-14882342 | Msa0719510:intron | 50.0% | |
| TCTCGTATTTCCGGTGTGAC+GGG | - | chr5_1:14882324-14882343 | Msa0719510:intron | 50.0% | |
| TCTGAACTTCCAGACACCCT+TGG | + | chr5_1:14882366-14882385 | None:intergenic | 50.0% | |
| GCGAACCAGAAGAAAGATCC+GGG | + | chr5_1:14882413-14882432 | None:intergenic | 50.0% | |
| GGCGAACCAGAAGAAAGATC+CGG | + | chr5_1:14882414-14882433 | None:intergenic | 50.0% | |
| CGGTGATTAATGAGGCGAAG+AGG | - | chr5_1:14882484-14882503 | Msa0719510:intron | 50.0% | |
| AAGGACTCAGAGGAAAGAGG+TGG | - | chr5_1:14882536-14882555 | Msa0719510:intron | 50.0% | |
| TTCACGACTCCAACGTACTC+CGG | + | chr5_1:14882585-14882604 | None:intergenic | 50.0% | |
| GCAATGGGATCAATGCCTGA+AGG | - | chr5_1:14882720-14882739 | Msa0719510:CDS | 50.0% | |
| GTTACACATTTGCGCCCTTC+AGG | + | chr5_1:14882738-14882757 | None:intergenic | 50.0% | |
| ! | GCTTCGATTCGTCAATAGGC+TGG | + | chr5_1:14882770-14882789 | None:intergenic | 50.0% |
| CCAGAGCAGTTGAGTGTCAA+CGG | - | chr5_1:14882897-14882916 | Msa0719510:CDS | 50.0% | |
| TCTCCTCAAGCCTGATGAGA+TGG | - | chr5_1:14882923-14882942 | Msa0719510:CDS | 50.0% | |
| CTTCCATCTCATCAGGCTTG+AGG | + | chr5_1:14882929-14882948 | None:intergenic | 50.0% | |
| TTCAGCTTGCGTGGAGGTAA+GGG | + | chr5_1:14882966-14882985 | None:intergenic | 50.0% | |
| ! | TGCTAGTAACGGGAACACTG+AGG | - | chr5_1:14883467-14883486 | Msa0719510:intron | 50.0% |
| !! | TGATGATGGTCGTTACGAGG+AGG | - | chr5_1:14883735-14883754 | Msa0719510:CDS | 50.0% |
| GAGGATAGGGTAGAGAGAAG+AGG | + | chr5_1:14883901-14883920 | None:intergenic | 50.0% | |
| TGAGGCTGTCCATGAGGATA+GGG | + | chr5_1:14883914-14883933 | None:intergenic | 50.0% | |
| ATGAGGCTGTCCATGAGGAT+AGG | + | chr5_1:14883915-14883934 | None:intergenic | 50.0% | |
| TATCCTCATGGACAGCCTCA+TGG | - | chr5_1:14883914-14883933 | Msa0719510:intron | 50.0% | |
| CCAGCTTCCATAATGTGAGC+AGG | + | chr5_1:14884415-14884434 | None:intergenic | 50.0% | |
| CCTGCTCACATTATGGAAGC+TGG | - | chr5_1:14884412-14884431 | Msa0719510:intron | 50.0% | |
| !! | GCATTTTTCCGATTGGCTCC+TGG | - | chr5_1:14884830-14884849 | Msa0719510:CDS | 50.0% |
| CTCCTGGACATTATAGCCAC+TGG | - | chr5_1:14884846-14884865 | Msa0719510:CDS | 50.0% | |
| CCTGGACATTATAGCCACTG+GGG | - | chr5_1:14884848-14884867 | Msa0719510:CDS | 50.0% | |
| ! | CATATTCACGTGTCGCTGCA+GGG | + | chr5_1:14884890-14884909 | None:intergenic | 50.0% |
| CACCACTAGTCGAAGAAGTG+TGG | - | chr5_1:14884910-14884929 | Msa0719510:CDS | 50.0% | |
| AGTACTCCGCAACATCTGGA+AGG | + | chr5_1:14884986-14885005 | None:intergenic | 50.0% | |
| ! | TGCGGAGTACTTCTTAAGCC+GGG | - | chr5_1:14884995-14885014 | Msa0719510:CDS | 50.0% |
| GAAGGGGTTACTCAGGGAAA+TGG | - | chr5_1:14885586-14885605 | Msa0719510:CDS | 50.0% | |
| CATGAGCGAAGGTTGCAAGT+GGG | - | chr5_1:14885835-14885854 | Msa0719510:intron | 50.0% | |
| GGTGAAGAAGATGCTTCCGC+CGG | - | chr5_1:14882158-14882177 | Msa0719510:CDS | 55.0% | |
| GTGAAGAAGATGCTTCCGCC+GGG | - | chr5_1:14882159-14882178 | Msa0719510:CDS | 55.0% | |
| !! | TCGTCAGGAACAGAAGCACC+CGG | + | chr5_1:14882180-14882199 | None:intergenic | 55.0% |
| CTCGTATTTCCGGTGTGACG+GGG | - | chr5_1:14882325-14882344 | Msa0719510:intron | 55.0% | |
| ATTAGGAGACCCCGTCACAC+CGG | + | chr5_1:14882337-14882356 | None:intergenic | 55.0% | |
| TGGTTCGCCTTCAGCTTCAC+CGG | - | chr5_1:14882425-14882444 | Msa0719510:intron | 55.0% | |
| GACTCAGAGGAAAGAGGTGG+TGG | - | chr5_1:14882539-14882558 | Msa0719510:intron | 55.0% | |
| ! | TCAGAGGAAAGAGGTGGTGG+AGG | - | chr5_1:14882542-14882561 | Msa0719510:intron | 55.0% |
| ATTGCAGCAGCTGTGTGCTC+AGG | - | chr5_1:14882697-14882716 | Msa0719510:intron | 55.0% | |
| TTGCAGCAGCTGTGTGCTCA+GGG | - | chr5_1:14882698-14882717 | Msa0719510:intron | 55.0% | |
| AGCTGTGTGCTCAGGGCAAT+GGG | - | chr5_1:14882705-14882724 | Msa0719510:intron | 55.0% | |
| CCGTTGACACTCAACTGCTC+TGG | + | chr5_1:14882900-14882919 | None:intergenic | 55.0% | |
| CTTCAGCTTGCGTGGAGGTA+AGG | + | chr5_1:14882967-14882986 | None:intergenic | 55.0% | |
| GATGGTCGTTACGAGGAGGA+AGG | - | chr5_1:14883739-14883758 | Msa0719510:CDS | 55.0% | |
| GATCCATGAGGCTGTCCATG+AGG | + | chr5_1:14883920-14883939 | None:intergenic | 55.0% | |
| GCCTCATGGATCAAGAGACG+AGG | - | chr5_1:14883928-14883947 | Msa0719510:intron | 55.0% | |
| GCCTCGTCTCTTGATCCATG+AGG | + | chr5_1:14883932-14883951 | None:intergenic | 55.0% | |
| CCCCAGTGGCTATAATGTCC+AGG | + | chr5_1:14884851-14884870 | None:intergenic | 55.0% | |
| ! | GCATATTCACGTGTCGCTGC+AGG | + | chr5_1:14884891-14884910 | None:intergenic | 55.0% |
| ATACTGGAGCTGGCGAGCTT+AGG | + | chr5_1:14885253-14885272 | None:intergenic | 55.0% | |
| ! | AATGCCAAGGGCATGAGCGA+AGG | - | chr5_1:14885824-14885843 | Msa0719510:intron | 55.0% |
| GCATGAGCGAAGGTTGCAAG+TGG | - | chr5_1:14885834-14885853 | Msa0719510:intron | 55.0% | |
| TTGTTGTCGTGTGCGCGAAC+GGG | + | chr5_1:14886127-14886146 | None:intergenic | 55.0% | |
| GTTGTTGTCGTGTGCGCGAA+CGG | + | chr5_1:14886128-14886147 | None:intergenic | 55.0% | |
| !! | TCAGGAACAGAAGCACCCGG+CGG | + | chr5_1:14882177-14882196 | None:intergenic | 60.0% |
| !! | GCCTTCAGCTTCACCGGCTT+CGG | - | chr5_1:14882431-14882450 | Msa0719510:intron | 60.0% |
| ACCGAAGCCGGTGAAGCTGA+AGG | + | chr5_1:14882435-14882454 | None:intergenic | 60.0% | |
| !! | GGTGGTGGAGGTTGTGAAGC+CGG | - | chr5_1:14882554-14882573 | Msa0719510:intron | 60.0% |
| GGTTGTGAAGCCGGCGTATC+CGG | - | chr5_1:14882563-14882582 | Msa0719510:intron | 60.0% | |
| CCAACGTACTCCGGATACGC+CGG | + | chr5_1:14882576-14882595 | None:intergenic | 60.0% | |
| CAGCTGTGTGCTCAGGGCAA+TGG | - | chr5_1:14882704-14882723 | Msa0719510:intron | 60.0% | |
| CTACCAGGCTTCAGCTTGCG+TGG | + | chr5_1:14882975-14882994 | None:intergenic | 60.0% | |
| GCAACCTTCGCTCATGCCCT+TGG | + | chr5_1:14885831-14885850 | None:intergenic | 60.0% | |
| GCACCAGACAGCAATGGCAG+CGG | - | chr5_1:14885929-14885948 | Msa0719510:intron | 60.0% | |
| GTTCCGCTGCCATTGCTGTC+TGG | + | chr5_1:14885935-14885954 | None:intergenic | 60.0% | |
| CCGGCGTATCCGGAGTACGT+TGG | - | chr5_1:14882573-14882592 | Msa0719510:intron | 65.0% | |
| CCAGGCTTCAGCTTGCGTGG+AGG | + | chr5_1:14882972-14882991 | None:intergenic | 65.0% | |
| CCTCCACGCAAGCTGAAGCC+TGG | - | chr5_1:14882969-14882988 | Msa0719510:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 14881054 | 14886679 | 14881054 | ID=Msa0719510;Name=Msa0719510 |
| chr5_1 | mRNA | 14881054 | 14886679 | 14881054 | ID=Msa0719510-mRNA-1;Parent=Msa0719510;Name=Msa0719510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=365|1|1|1|0.87|0.77|9|286|839 |
| chr5_1 | exon | 14881054 | 14881928 | 14881054 | ID=Msa0719510-mRNA-1:exon:5756;Parent=Msa0719510-mRNA-1 |
| chr5_1 | exon | 14882032 | 14882204 | 14882032 | ID=Msa0719510-mRNA-1:exon:5755;Parent=Msa0719510-mRNA-1 |
| chr5_1 | exon | 14882717 | 14882964 | 14882717 | ID=Msa0719510-mRNA-1:exon:5754;Parent=Msa0719510-mRNA-1 |
| chr5_1 | exon | 14883300 | 14883477 | 14883300 | ID=Msa0719510-mRNA-1:exon:5753;Parent=Msa0719510-mRNA-1 |
| chr5_1 | exon | 14883679 | 14883858 | 14883679 | ID=Msa0719510-mRNA-1:exon:5752;Parent=Msa0719510-mRNA-1 |
| chr5_1 | exon | 14883938 | 14884042 | 14883938 | ID=Msa0719510-mRNA-1:exon:5751;Parent=Msa0719510-mRNA-1 |
| chr5_1 | exon | 14884194 | 14884331 | 14884194 | ID=Msa0719510-mRNA-1:exon:5750;Parent=Msa0719510-mRNA-1 |
| chr5_1 | exon | 14884702 | 14885706 | 14884702 | ID=Msa0719510-mRNA-1:exon:5749;Parent=Msa0719510-mRNA-1 |
| chr5_1 | exon | 14886411 | 14886679 | 14886411 | ID=Msa0719510-mRNA-1:exon:5748;Parent=Msa0719510-mRNA-1 |
| chr5_1 | five_prime_UTR | 14886411 | 14886679 | 14886411 | ID=Msa0719510-mRNA-1:five_prime_utr;Parent=Msa0719510-mRNA-1 |
| chr5_1 | five_prime_UTR | 14885611 | 14885706 | 14885611 | ID=Msa0719510-mRNA-1:five_prime_utr;Parent=Msa0719510-mRNA-1 |
| chr5_1 | CDS | 14884702 | 14885610 | 14884702 | ID=Msa0719510-mRNA-1:cds;Parent=Msa0719510-mRNA-1 |
| chr5_1 | CDS | 14884194 | 14884331 | 14884194 | ID=Msa0719510-mRNA-1:cds;Parent=Msa0719510-mRNA-1 |
| chr5_1 | CDS | 14883938 | 14884042 | 14883938 | ID=Msa0719510-mRNA-1:cds;Parent=Msa0719510-mRNA-1 |
| chr5_1 | CDS | 14883679 | 14883858 | 14883679 | ID=Msa0719510-mRNA-1:cds;Parent=Msa0719510-mRNA-1 |
| chr5_1 | CDS | 14883300 | 14883477 | 14883300 | ID=Msa0719510-mRNA-1:cds;Parent=Msa0719510-mRNA-1 |
| chr5_1 | CDS | 14882717 | 14882964 | 14882717 | ID=Msa0719510-mRNA-1:cds;Parent=Msa0719510-mRNA-1 |
| chr5_1 | CDS | 14882032 | 14882204 | 14882032 | ID=Msa0719510-mRNA-1:cds;Parent=Msa0719510-mRNA-1 |
| chr5_1 | CDS | 14881340 | 14881928 | 14881340 | ID=Msa0719510-mRNA-1:cds;Parent=Msa0719510-mRNA-1 |
| chr5_1 | three_prime_UTR | 14881054 | 14881339 | 14881054 | ID=Msa0719510-mRNA-1:three_prime_utr;Parent=Msa0719510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
