Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804850 | XP_013469889.1 | 93.939 | 66 | 4 | 0 | 52 | 117 | 149 | 214 | 2.45e-29 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804850 | sp|Q9ZSE4|PP2A_HEVBR | 92.857 | 56 | 4 | 0 | 268 | 323 | 208 | 263 | 1.32e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804850 | A0A072VQ71 | 93.939 | 66 | 4 | 0 | 52 | 117 | 149 | 214 | 1.17e-29 | 124 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090320 | Msa0804850 | 0.817130 | 3.868626e-52 | -8.615850e-47 |
| Msa0804850 | Msa0901020 | 0.808447 | 3.083932e-50 | -8.615850e-47 |
| Msa0804850 | Msa0967280 | 0.841948 | 3.485897e-58 | -8.615850e-47 |
| Msa0804850 | Msa1116170 | 0.822911 | 1.838304e-53 | -8.615850e-47 |
| Msa0137640 | Msa0804850 | 0.821145 | 4.718256e-53 | -8.615850e-47 |
| Msa0182740 | Msa0804850 | 0.826643 | 2.423667e-54 | -8.615850e-47 |
| Msa0292930 | Msa0804850 | 0.810869 | 9.301679e-51 | -8.615850e-47 |
| Msa0362450 | Msa0804850 | 0.839985 | 1.141926e-57 | -8.615850e-47 |
| Msa0493000 | Msa0804850 | 0.803428 | 3.502960e-49 | -8.615850e-47 |
| Msa0537720 | Msa0804850 | 0.801816 | 7.531453e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804850 | MtrunA17_Chr1g0206121 | 93.939 | 66 | 4 | 0 | 52 | 117 | 149 | 214 | 2.26e-33 | 124 |
| Msa0804850 | MtrunA17_Chr2g0317801 | 93.750 | 64 | 4 | 0 | 131 | 194 | 50 | 113 | 2.64e-32 | 125 |
| Msa0804850 | MtrunA17_Chr5g0415261 | 92.857 | 56 | 4 | 0 | 268 | 323 | 208 | 263 | 1.36e-29 | 114 |
| Msa0804850 | MtrunA17_Chr8g0364041 | 89.286 | 56 | 6 | 0 | 268 | 323 | 208 | 263 | 1.00e-27 | 109 |
| Msa0804850 | MtrunA17_Chr8g0378521 | 55.319 | 94 | 35 | 2 | 231 | 323 | 178 | 265 | 3.76e-23 | 97.4 |
| Msa0804850 | MtrunA17_Chr7g0268381 | 73.214 | 56 | 15 | 0 | 268 | 323 | 215 | 270 | 1.94e-22 | 95.5 |
| Msa0804850 | MtrunA17_Chr5g0445011 | 57.143 | 56 | 24 | 0 | 268 | 323 | 206 | 261 | 4.10e-15 | 74.7 |
| Msa0804850 | MtrunA17_Chr8g0360631 | 69.811 | 53 | 12 | 2 | 37 | 89 | 128 | 176 | 7.69e-13 | 67.4 |
| Msa0804850 | MtrunA17_Chr1g0165341 | 52.632 | 57 | 26 | 1 | 268 | 323 | 204 | 260 | 7.46e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0804850 | AT1G69960.1 | 89.286 | 56 | 6 | 0 | 268 | 323 | 209 | 264 | 2.21e-28 | 112 |
| Msa0804850 | AT1G59830.1 | 89.286 | 56 | 6 | 0 | 268 | 323 | 208 | 263 | 3.17e-28 | 111 |
| Msa0804850 | AT1G10430.2 | 87.500 | 56 | 7 | 0 | 268 | 323 | 208 | 263 | 8.14e-28 | 110 |
| Msa0804850 | AT1G10430.1 | 87.500 | 56 | 7 | 0 | 268 | 323 | 208 | 263 | 8.14e-28 | 110 |
| Msa0804850 | AT5G53760.2 | 62.500 | 80 | 26 | 1 | 113 | 192 | 43 | 118 | 4.41e-23 | 100 |
| Msa0804850 | AT5G53760.1 | 62.500 | 80 | 26 | 1 | 113 | 192 | 43 | 118 | 4.41e-23 | 100 |
| Msa0804850 | AT2G42500.2 | 54.839 | 93 | 35 | 2 | 232 | 323 | 137 | 223 | 5.26e-23 | 96.7 |
| Msa0804850 | AT2G42500.1 | 75.000 | 56 | 14 | 0 | 268 | 323 | 215 | 270 | 9.64e-23 | 96.7 |
| Msa0804850 | AT3G58500.1 | 73.214 | 56 | 15 | 0 | 268 | 323 | 215 | 270 | 3.51e-22 | 95.1 |
| Msa0804850 | AT1G26700.1 | 67.188 | 64 | 21 | 0 | 129 | 192 | 49 | 112 | 1.33e-19 | 89.7 |
| Msa0804850 | AT1G26700.2 | 67.188 | 64 | 21 | 0 | 129 | 192 | 49 | 112 | 1.33e-19 | 89.7 |
| Msa0804850 | AT1G61770.1 | 60.606 | 66 | 23 | 1 | 52 | 117 | 148 | 210 | 1.91e-18 | 84.7 |
| Msa0804850 | AT1G59830.2 | 78.723 | 47 | 10 | 0 | 268 | 314 | 208 | 254 | 4.15e-18 | 82.8 |
| Msa0804850 | AT4G26720.1 | 55.357 | 56 | 25 | 0 | 268 | 323 | 206 | 261 | 3.72e-15 | 75.1 |
| Msa0804850 | AT5G55260.1 | 55.357 | 56 | 25 | 0 | 268 | 323 | 206 | 261 | 9.05e-15 | 73.9 |
| Msa0804850 | AT5G55260.2 | 55.357 | 56 | 25 | 0 | 268 | 323 | 247 | 302 | 1.20e-14 | 74.3 |
| Msa0804850 | AT1G50370.1 | 52.632 | 57 | 26 | 1 | 268 | 323 | 204 | 260 | 1.45e-11 | 64.7 |
| Msa0804850 | AT3G19980.1 | 52.632 | 57 | 26 | 1 | 268 | 323 | 204 | 260 | 2.32e-11 | 63.9 |
Find 92 sgRNAs with CRISPR-Local
Find 512 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCCACATTAGCAGTAATT+TGG | 0.202397 | 5_3:-21127994 | None:intergenic |
| GTTTCAGTGGGTGCGGTTGC+GGG | 0.252658 | 5_3:+21122314 | Msa0804850:CDS |
| TAAGGTTTGGACTTTGGTTT+TGG | 0.262053 | 5_3:+21123906 | Msa0804850:CDS |
| AAAATTATTGAATCCTTCTT+TGG | 0.268574 | 5_3:-21125893 | None:intergenic |
| CACAATTCCTCGAGAAATTT+CGG | 0.273263 | 5_3:+21125691 | Msa0804850:CDS |
| ATGGCTGCCATTCTGGAAAT+TGG | 0.280680 | 5_3:+21128018 | Msa0804850:three_prime_UTR |
| TGGGAATATGGCTGCCATTC+TGG | 0.285766 | 5_3:+21128011 | Msa0804850:three_prime_UTR |
| TCCAATTGTGTCAATTCTAT+TGG | 0.288711 | 5_3:-21128306 | None:intergenic |
| CTTTGATGGAATGCAAATAT+TGG | 0.291781 | 5_3:-21124739 | None:intergenic |
| AGAGTCCTTGGCGAGTATTT+TGG | 0.320065 | 5_3:+21125653 | Msa0804850:intron |
| GCACTATTATAGAACTTTGA+TGG | 0.322095 | 5_3:-21124753 | None:intergenic |
| CGTTTCAGTGGGTGCGGTTG+CGG | 0.324867 | 5_3:+21122313 | Msa0804850:CDS |
| CAAAGTCCAAACCTTATATA+TGG | 0.338721 | 5_3:-21123899 | None:intergenic |
| TCCAGACGGTCGTTGTTGTT+GGG | 0.341072 | 5_3:+21127727 | Msa0804850:intron |
| GAAGAAGGGTCAAAAGAATA+AGG | 0.347312 | 5_3:+21123629 | Msa0804850:CDS |
| TGCAGTTTGATCCAGCTCTA+AGG | 0.347824 | 5_3:+21128064 | Msa0804850:three_prime_UTR |
| ATCCAGACGGTCGTTGTTGT+TGG | 0.351764 | 5_3:+21127726 | Msa0804850:intron |
| CATATATAAGGTTTGGACTT+TGG | 0.357537 | 5_3:+21123900 | Msa0804850:CDS |
| TTACTGCTAATGTGGGAATA+TGG | 0.363922 | 5_3:+21127999 | Msa0804850:exon |
| TGAAAGGCCCTCCATATATA+AGG | 0.367855 | 5_3:+21123888 | Msa0804850:CDS |
| GGCCCTCCATATATAAGGTT+TGG | 0.380657 | 5_3:+21123893 | Msa0804850:CDS |
| ACCAATAGAATTGACACAAT+TGG | 0.386985 | 5_3:+21128305 | Msa0804850:three_prime_UTR |
| CGGTGATGAGCTTCCAAAGA+AGG | 0.402495 | 5_3:+21125880 | Msa0804850:CDS |
| GAACTTGATCTGCAGATAAC+AGG | 0.414089 | 5_3:+21123862 | Msa0804850:CDS |
| GAGGAGTTTCATTGTTTAAG+TGG | 0.419901 | 5_3:+21128203 | Msa0804850:three_prime_UTR |
| TTTCATTGTTTAAGTGGTGG+AGG | 0.449973 | 5_3:+21128209 | Msa0804850:three_prime_UTR |
| AGCTGGTGAGCTCTAGATAT+CGG | 0.450243 | 5_3:-21127829 | None:intergenic |
| TTCACTAACAACAGGTCCTT+CGG | 0.453073 | 5_3:-21124829 | None:intergenic |
| TGAAGTTACAATAAATAATC+CGG | 0.461814 | 5_3:-21128117 | None:intergenic |
| ACCTGTCCTTCACTAACAAC+AGG | 0.463133 | 5_3:-21124837 | None:intergenic |
| GACTCAATTTGCCTTAGAGC+TGG | 0.468551 | 5_3:-21128075 | None:intergenic |
| CGCAACCGCACCCACTGAAA+CGG | 0.472266 | 5_3:-21122312 | None:intergenic |
| ACCTGTTGTTAGTGAAGGAC+AGG | 0.475408 | 5_3:+21124836 | Msa0804850:CDS |
| TTGTGATGGAAGGATATAAT+TGG | 0.475428 | 5_3:+21127851 | Msa0804850:CDS |
| TTCTCTACAGCTTCAAGCAA+AGG | 0.476145 | 5_3:-21124497 | None:intergenic |
| TTTGTGAGTACCCCTTCATC+TGG | 0.481397 | 5_3:-21125777 | None:intergenic |
| CTCGTACTTACTGCTACATC+TGG | 0.483124 | 5_3:+21124708 | Msa0804850:CDS |
| TTGGAGCTTGAGCGCAGTGG+TGG | 0.486666 | 5_3:+21123594 | Msa0804850:CDS |
| TTTCGGCCAAGAAACACAAT+AGG | 0.488375 | 5_3:+21125708 | Msa0804850:CDS |
| ATAAAGAAGTAACTACATAC+AGG | 0.498414 | 5_3:-21128148 | None:intergenic |
| GCTCCAAATTACTGCTAATG+TGG | 0.502813 | 5_3:+21127991 | Msa0804850:exon |
| TATATATCTCCACGTGGTGA+TGG | 0.503293 | 5_3:+21127751 | Msa0804850:CDS |
| CCAGACGGTCGTTGTTGTTG+GGG | 0.504237 | 5_3:+21127728 | Msa0804850:intron |
| GTTCTCTCCAATTTCCAGAA+TGG | 0.508690 | 5_3:-21128025 | None:intergenic |
| GCTCAGTTCAATCACACAAA+TGG | 0.518477 | 5_3:+21127799 | Msa0804850:CDS |
| TGGGATTACAAATAAGAAGA+AGG | 0.522094 | 5_3:+21123614 | Msa0804850:CDS |
| ACCTTCCGTTTCAGTGGGTG+CGG | 0.522220 | 5_3:+21122307 | Msa0804850:CDS |
| GAGTTTCATTGTTTAAGTGG+TGG | 0.522269 | 5_3:+21128206 | Msa0804850:three_prime_UTR |
| GACCTTTATATACAGAAAAG+TGG | 0.524010 | 5_3:+21123813 | Msa0804850:intron |
| CTTCATCATCGATCAAAGGT+GGG | 0.529373 | 5_3:+21122392 | Msa0804850:CDS |
| CTTCTTTGGAAGCTCATCAC+CGG | 0.530122 | 5_3:-21125879 | None:intergenic |
| GGAGGAAGACCTCAGTAAAG+TGG | 0.539095 | 5_3:+21123834 | Msa0804850:CDS |
| TCTTCATCATCGATCAAAGG+TGG | 0.542565 | 5_3:+21122391 | Msa0804850:CDS |
| TTCATTGTTTAAGTGGTGGA+GGG | 0.544833 | 5_3:+21128210 | Msa0804850:three_prime_UTR |
| GTAACTGCAGCACCAGATGA+AGG | 0.547534 | 5_3:+21125765 | Msa0804850:CDS |
| ATAACTCTCAGAAATTTACT+AGG | 0.548737 | 5_3:+21125741 | Msa0804850:CDS |
| TGAGAAACCTTCCGTTTCAG+TGG | 0.551187 | 5_3:+21122301 | Msa0804850:CDS |
| GCTGTAGAGAAGATGAAAGA+AGG | 0.552280 | 5_3:+21124509 | Msa0804850:CDS |
| TAGAGCTCACCAGCTTGTGA+TGG | 0.558859 | 5_3:+21127837 | Msa0804850:CDS |
| TGGAGCTTGAGCGCAGTGGT+GGG | 0.561403 | 5_3:+21123595 | Msa0804850:CDS |
| AGGGTCAAAAGAATAAGGAC+AGG | 0.571889 | 5_3:+21123634 | Msa0804850:CDS |
| TGATGGATATACATTTAGAC+AGG | 0.573398 | 5_3:+21127768 | Msa0804850:CDS |
| GGATTCTGAGAAATTGAGAA+AGG | 0.574225 | 5_3:+21122335 | Msa0804850:CDS |
| TAACTGCAGCACCAGATGAA+GGG | 0.575575 | 5_3:+21125766 | Msa0804850:CDS |
| GGGATTACAAATAAGAAGAA+GGG | 0.578969 | 5_3:+21123615 | Msa0804850:CDS |
| GTCCAAACCTTATATATGGA+GGG | 0.582016 | 5_3:-21123895 | None:intergenic |
| TATATCCTTCCATCACAAGC+TGG | 0.582387 | 5_3:-21127846 | None:intergenic |
| GCTCACCAGCTTGTGATGGA+AGG | 0.582864 | 5_3:+21127841 | Msa0804850:CDS |
| AGGAGCAAGCGGCAATAACA+TGG | 0.584085 | 5_3:+21128345 | Msa0804850:three_prime_UTR |
| ATCGAAGAGAATAGCTCCGA+AGG | 0.594078 | 5_3:+21124813 | Msa0804850:CDS |
| AGTCCAAACCTTATATATGG+AGG | 0.596412 | 5_3:-21123896 | None:intergenic |
| TGCAGATAACAGGAACTGAA+AGG | 0.599633 | 5_3:+21123872 | Msa0804850:CDS |
| CTCCAAATTACTGCTAATGT+GGG | 0.602848 | 5_3:+21127992 | Msa0804850:exon |
| AACTGCAGCACCAGATGAAG+GGG | 0.604910 | 5_3:+21125767 | Msa0804850:CDS |
| GTTCTTCCTCCACTTTACTG+AGG | 0.607572 | 5_3:-21123843 | None:intergenic |
| GAGAAACCTTCCGTTTCAGT+GGG | 0.609923 | 5_3:+21122302 | Msa0804850:CDS |
| TTCTTGGCCGAAATTTCTCG+AGG | 0.629558 | 5_3:-21125698 | None:intergenic |
| TCAATCTCAGATCTAGTGCA+CGG | 0.630451 | 5_3:-21124783 | None:intergenic |
| CAGATGTAGCAGTAAGTACG+AGG | 0.632286 | 5_3:-21124707 | None:intergenic |
| GGAAGGATATAATTGGTGCC+AGG | 0.633685 | 5_3:+21127858 | Msa0804850:CDS |
| GAAGGACCTGTTGTTAGTGA+AGG | 0.639790 | 5_3:+21124831 | Msa0804850:CDS |
| GGAAGACCTCAGTAAAGTGG+AGG | 0.640383 | 5_3:+21123837 | Msa0804850:CDS |
| TGACTCTACACGAAAGACAC+CGG | 0.649605 | 5_3:+21128098 | Msa0804850:three_prime_UTR |
| TATCACCAAAATACTCGCCA+AGG | 0.654490 | 5_3:-21125658 | None:intergenic |
| ACCGCACCCACTGAAACGGA+AGG | 0.664522 | 5_3:-21122308 | None:intergenic |
| GCGTTGGAGCTTGAGCGCAG+TGG | 0.669591 | 5_3:+21123591 | Msa0804850:CDS |
| AGCAGGTGTCTTCTTCACCA+TGG | 0.671975 | 5_3:-21123550 | None:intergenic |
| TAAAGAAGTAACTACATACA+GGG | 0.672470 | 5_3:-21128147 | None:intergenic |
| CTTTATATACAGAAAAGTGG+AGG | 0.682566 | 5_3:+21123816 | Msa0804850:intron |
| AGATGTAGCAGTAAGTACGA+GGG | 0.725310 | 5_3:-21124706 | None:intergenic |
| AATGTATATCCATCACCACG+TGG | 0.753350 | 5_3:-21127760 | None:intergenic |
| TTGGGGTATATATCTCCACG+TGG | 0.785169 | 5_3:+21127745 | Msa0804850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTTTTATTTAAGTG+GGG | - | chr5_3:21121364-21121383 | None:intergenic | 10.0% |
| !!! | CATATTTTTTTTATTTAAGT+GGG | - | chr5_3:21121365-21121384 | None:intergenic | 10.0% |
| !!! | ACATATTTTTTTTATTTAAG+TGG | - | chr5_3:21121366-21121385 | None:intergenic | 10.0% |
| !!! | TTAATTTTAAAAAATTTGAC+AGG | + | chr5_3:21126060-21126079 | Msa0804850:intron | 10.0% |
| !!! | TAGACTTAATTTATTTTTTG+AGG | - | chr5_3:21121332-21121351 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTATTTAAGTGG+GGG | - | chr5_3:21121363-21121382 | None:intergenic | 15.0% |
| !!! | TACATACAATGTTTTTTTTT+TGG | - | chr5_3:21121836-21121855 | None:intergenic | 15.0% |
| !! | AACAATAAGATAAATATGTT+TGG | - | chr5_3:21121952-21121971 | None:intergenic | 15.0% |
| !!! | TTTGTAAATTGATAATTTGT+TGG | + | chr5_3:21122044-21122063 | Msa0804850:intron | 15.0% |
| !!! | TATTTATGTTTTTGTTTGTT+TGG | + | chr5_3:21122974-21122993 | Msa0804850:intron | 15.0% |
| !! | TTATATTATTGTTCATTTCA+TGG | + | chr5_3:21123354-21123373 | Msa0804850:intron | 15.0% |
| !!! | GACTTTTTTTTTGTTAATTA+AGG | + | chr5_3:21123521-21123540 | Msa0804850:intron | 15.0% |
| !!! | TTTTTTGTTAATTAAGGTTT+TGG | + | chr5_3:21123527-21123546 | Msa0804850:intron | 15.0% |
| !! | TGCTTATAAAAATAAACTAA+GGG | + | chr5_3:21123569-21123588 | Msa0804850:CDS | 15.0% |
| !! | AAAAGGTAGATTTATATATA+TGG | - | chr5_3:21124316-21124335 | None:intergenic | 15.0% |
| !! | TCAATACATCAAATTAAAAA+AGG | - | chr5_3:21124333-21124352 | None:intergenic | 15.0% |
| !! | TTAATCATTTATAAGTCTTA+CGG | + | chr5_3:21124366-21124385 | Msa0804850:intron | 15.0% |
| !! | AAAGAACTATTATTCATATT+TGG | - | chr5_3:21124569-21124588 | None:intergenic | 15.0% |
| !!! | TATATTTTCATTTCTCATTT+CGG | + | chr5_3:21124859-21124878 | Msa0804850:intron | 15.0% |
| !! | ATGTAAAAAATGAAATGAAA+TGG | + | chr5_3:21125021-21125040 | Msa0804850:intron | 15.0% |
| !! | ACACTTTAAATCATATAAAA+AGG | - | chr5_3:21125119-21125138 | None:intergenic | 15.0% |
| !! | CACAAATTAATTGAATTATT+TGG | + | chr5_3:21125181-21125200 | Msa0804850:intron | 15.0% |
| !!! | TTTTGTTTATAAACATGATA+CGG | + | chr5_3:21126302-21126321 | Msa0804850:intron | 15.0% |
| !!! | AAATGATTAAAGGTATTTAA+TGG | + | chr5_3:21126423-21126442 | Msa0804850:intron | 15.0% |
| !!! | ATTCTGTTCTATTTTATTAT+CGG | + | chr5_3:21126726-21126745 | Msa0804850:intron | 15.0% |
| !! | CAAAAATGAAATATTAATTG+AGG | - | chr5_3:21127591-21127610 | None:intergenic | 15.0% |
| !!! | ACAATTTTACTTTTCAATAT+AGG | + | chr5_3:21127664-21127683 | Msa0804850:intron | 15.0% |
| !!! | TCTTTTTTTATTACTCTTTT+AGG | + | chr5_3:21127942-21127961 | Msa0804850:intron | 15.0% |
| !!! | ATTTTTCTTTAAGAAAAAAG+AGG | + | chr5_3:21128184-21128203 | Msa0804850:three_prime_UTR | 15.0% |
| !!! | TATTTTAAACGGTTAGATAT+TGG | + | chr5_3:21120829-21120848 | Msa0804850:intron | 20.0% |
| !!! | AAAAAAAGTTAATTTTTGCG+AGG | + | chr5_3:21120871-21120890 | Msa0804850:intron | 20.0% |
| !!! | ATTTTTTTTATTTAAGTGGG+GGG | - | chr5_3:21121362-21121381 | None:intergenic | 20.0% |
| !! | AAAAAAATTAAGTGAAAGAG+AGG | - | chr5_3:21121624-21121643 | None:intergenic | 20.0% |
| !!! | AAATTGCATTTTGATTGTAT+TGG | + | chr5_3:21121710-21121729 | Msa0804850:intron | 20.0% |
| !! | TTTGTGTTAAACATTATGAA+GGG | + | chr5_3:21122604-21122623 | Msa0804850:intron | 20.0% |
| !! | CATTTCACAAATAACAAATA+GGG | - | chr5_3:21123465-21123484 | None:intergenic | 20.0% |
| !! | ACATTTCACAAATAACAAAT+AGG | - | chr5_3:21123466-21123485 | None:intergenic | 20.0% |
| !!! | CTTAGTTTATTTTTATAAGC+AGG | - | chr5_3:21123570-21123589 | None:intergenic | 20.0% |
| !! | CTGCTTATAAAAATAAACTA+AGG | + | chr5_3:21123568-21123587 | Msa0804850:CDS | 20.0% |
| !! | ATCAAAAGTAAAGAAATTAC+AGG | - | chr5_3:21123772-21123791 | None:intergenic | 20.0% |
| !! | TAATCATTTATAAGTCTTAC+GGG | + | chr5_3:21124367-21124386 | Msa0804850:intron | 20.0% |
| !! | AACTATTATTCATATTTGGA+AGG | - | chr5_3:21124565-21124584 | None:intergenic | 20.0% |
| !!! | ACTCTGAAAATAATGAAAAT+TGG | - | chr5_3:21124665-21124684 | None:intergenic | 20.0% |
| !! | TTCTAAACTCTATAAAGTAA+AGG | + | chr5_3:21124913-21124932 | Msa0804850:intron | 20.0% |
| !! | CATAATCAATGAAAATGTAT+TGG | + | chr5_3:21124968-21124987 | Msa0804850:intron | 20.0% |
| !!! | GAAATGAAATGGTTTTAAAT+TGG | + | chr5_3:21125032-21125051 | Msa0804850:intron | 20.0% |
| !!! | TTTATATGATTTAAAGTGTG+TGG | + | chr5_3:21125120-21125139 | Msa0804850:intron | 20.0% |
| !! | ACATAACTGAATTAACTAAA+GGG | - | chr5_3:21125222-21125241 | None:intergenic | 20.0% |
| !! | AACATAACTGAATTAACTAA+AGG | - | chr5_3:21125223-21125242 | None:intergenic | 20.0% |
| !!! | AATTTTAATGATGAAGTTCT+TGG | + | chr5_3:21125336-21125355 | Msa0804850:intron | 20.0% |
| !! | AAAATTATTGAATCCTTCTT+TGG | - | chr5_3:21125896-21125915 | None:intergenic | 20.0% |
| !!! | TCATGAGATTGTTTTTTTTT+AGG | + | chr5_3:21126194-21126213 | Msa0804850:intron | 20.0% |
| !!! | CATGAGATTGTTTTTTTTTA+GGG | + | chr5_3:21126195-21126214 | Msa0804850:intron | 20.0% |
| !!! | ATGAGATTGTTTTTTTTTAG+GGG | + | chr5_3:21126196-21126215 | Msa0804850:intron | 20.0% |
| !!! | ATTGATAATATAGCAATGAT+AGG | + | chr5_3:21126264-21126283 | Msa0804850:intron | 20.0% |
| !! | ATTCATGATACAGAAAATTA+AGG | + | chr5_3:21126477-21126496 | Msa0804850:intron | 20.0% |
| !! | TATAGAAATTCACTGTAAAA+TGG | - | chr5_3:21126673-21126692 | None:intergenic | 20.0% |
| !! | AACAGAATATCAGAAAAAAT+GGG | - | chr5_3:21126714-21126733 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTGAATCTTTTTG+TGG | + | chr5_3:21126850-21126869 | Msa0804850:intron | 20.0% |
| !! | CATAAAATCTGCAATAAAAA+AGG | - | chr5_3:21127203-21127222 | None:intergenic | 20.0% |
| !!! | TTGTTTGCATTTTTTCTTTT+TGG | + | chr5_3:21127495-21127514 | Msa0804850:intron | 20.0% |
| !!! | TAAAATGAATCAAAGTGTTA+CGG | - | chr5_3:21127891-21127910 | None:intergenic | 20.0% |
| !!! | TAACACTTTGATTCATTTTA+AGG | + | chr5_3:21127891-21127910 | Msa0804850:intron | 20.0% |
| !! | TGAAGTTACAATAAATAATC+CGG | - | chr5_3:21128120-21128139 | None:intergenic | 20.0% |
| !!! | ACAACATAATTCTTTCTTTT+TGG | + | chr5_3:21128242-21128261 | Msa0804850:three_prime_UTR | 20.0% |
| !!! | TGGAATTGTTTATTTTTGAT+AGG | + | chr5_3:21128325-21128344 | Msa0804850:three_prime_UTR | 20.0% |
| ! | ATATCAATATCAAGTTTACG+CGG | - | chr5_3:21120563-21120582 | None:intergenic | 25.0% |
| ! | TTGATATTGATATGAAGTCT+GGG | + | chr5_3:21120570-21120589 | Msa0804850:intron | 25.0% |
| ! | ATTATCTCTCTGAATATTGA+TGG | - | chr5_3:21120622-21120641 | None:intergenic | 25.0% |
| !!! | CCACTTTTCACTTTTATTTT+TGG | - | chr5_3:21120898-21120917 | None:intergenic | 25.0% |
| ! | CCAAAAATAAAAGTGAAAAG+TGG | + | chr5_3:21120895-21120914 | Msa0804850:intron | 25.0% |
| !!! | TATTTTTTCGTTGACTTTCA+AGG | + | chr5_3:21121097-21121116 | Msa0804850:intron | 25.0% |
| !!! | ATTTTAGAACAATACCTCTA+AGG | - | chr5_3:21121226-21121245 | None:intergenic | 25.0% |
| ! | AAATTTACTGTCCCAAATTA+GGG | - | chr5_3:21121481-21121500 | None:intergenic | 25.0% |
| ! | TAAATTTACTGTCCCAAATT+AGG | - | chr5_3:21121482-21121501 | None:intergenic | 25.0% |
| !!! | GCATATTTTAAAAAGAGAGT+CGG | + | chr5_3:21121735-21121754 | Msa0804850:intron | 25.0% |
| !!! | CATATTTTAAAAAGAGAGTC+GGG | + | chr5_3:21121736-21121755 | Msa0804850:intron | 25.0% |
| ! | GGGCAAATTAGTAAAAAAAA+CGG | - | chr5_3:21122011-21122030 | None:intergenic | 25.0% |
| ! | TTTACAAAAATACCCCTAAA+GGG | - | chr5_3:21122032-21122051 | None:intergenic | 25.0% |
| ! | ATTTACAAAAATACCCCTAA+AGG | - | chr5_3:21122033-21122052 | None:intergenic | 25.0% |
| ! | TCGTATCATTCCATATATAT+AGG | - | chr5_3:21122075-21122094 | None:intergenic | 25.0% |
| !!! | ATTGTTGCATGTTTTTGTTT+TGG | + | chr5_3:21122536-21122555 | Msa0804850:intron | 25.0% |
| ! | GTTTGTGTTAAACATTATGA+AGG | + | chr5_3:21122603-21122622 | Msa0804850:intron | 25.0% |
| ! | CACATTCTCAAAAACTAATA+TGG | - | chr5_3:21122630-21122649 | None:intergenic | 25.0% |
| ! | AGGAAAATTGGTTATTCTAA+TGG | + | chr5_3:21122731-21122750 | Msa0804850:intron | 25.0% |
| !! | ATGGTTTAAAACCTTGAATA+TGG | - | chr5_3:21123004-21123023 | None:intergenic | 25.0% |
| !!! | ATATTCAAGGTTTTAAACCA+TGG | + | chr5_3:21123003-21123022 | Msa0804850:intron | 25.0% |
| ! | GAAATATTATACCAAGAATC+AGG | - | chr5_3:21123315-21123334 | None:intergenic | 25.0% |
| ! | TCTTATGAATCAAAGAGAAA+CGG | - | chr5_3:21123736-21123755 | None:intergenic | 25.0% |
| ! | TGTTAATCTATGTAGTTGTA+GGG | + | chr5_3:21124087-21124106 | Msa0804850:intron | 25.0% |
| !! | AAAATTTTCATGGTAGGAAT+TGG | + | chr5_3:21124110-21124129 | Msa0804850:intron | 25.0% |
| ! | TTAGCAAAATGCCTTAAAAA+TGG | - | chr5_3:21124145-21124164 | None:intergenic | 25.0% |
| ! | TGTACTGCATTTATTTGTAA+GGG | + | chr5_3:21124267-21124286 | Msa0804850:intron | 25.0% |
| !!! | GTGGTTATATTTTTTTTCTG+TGG | + | chr5_3:21124453-21124472 | Msa0804850:intron | 25.0% |
| !!! | ATATTTTTTTTCTGTGGTTG+CGG | + | chr5_3:21124459-21124478 | Msa0804850:intron | 25.0% |
| !! | TTCATATTTGGAAGGATTTT+CGG | - | chr5_3:21124557-21124576 | None:intergenic | 25.0% |
| ! | ATGAAATTAATACAATGCAG+AGG | - | chr5_3:21124620-21124639 | None:intergenic | 25.0% |
| ! | AAACTCTATAAAGTAAAGGA+AGG | + | chr5_3:21124917-21124936 | Msa0804850:intron | 25.0% |
| ! | AACTCTATAAAGTAAAGGAA+GGG | + | chr5_3:21124918-21124937 | Msa0804850:intron | 25.0% |
| !!! | ATGAAATGGTTTTAAATTGG+AGG | + | chr5_3:21125035-21125054 | Msa0804850:intron | 25.0% |
| ! | ATTGTGATGATAAAATAGGA+GGG | - | chr5_3:21125085-21125104 | None:intergenic | 25.0% |
| ! | TATTGTGATGATAAAATAGG+AGG | - | chr5_3:21125086-21125105 | None:intergenic | 25.0% |
| ! | GTGTATTGTGATGATAAAAT+AGG | - | chr5_3:21125089-21125108 | None:intergenic | 25.0% |
| ! | GTTATGTTTCATGAATTGAA+AGG | + | chr5_3:21125235-21125254 | Msa0804850:intron | 25.0% |
| ! | TTCACAGTGATAATATGAAT+TGG | - | chr5_3:21125310-21125329 | None:intergenic | 25.0% |
| !!! | TTTGTTTTCATTATGTGATG+AGG | - | chr5_3:21125514-21125533 | None:intergenic | 25.0% |
| ! | AAGTTAAGAAGTTGAATAGT+AGG | - | chr5_3:21125582-21125601 | None:intergenic | 25.0% |
| ! | ATAACTCTCAGAAATTTACT+AGG | + | chr5_3:21125741-21125760 | Msa0804850:CDS | 25.0% |
| ! | AAACACTCTAAATGATTACA+TGG | + | chr5_3:21125797-21125816 | Msa0804850:intron | 25.0% |
| ! | TCTAAATGATTACATGGTAA+TGG | + | chr5_3:21125803-21125822 | Msa0804850:intron | 25.0% |
| !! | TGTAACTTTTAACAGATTTC+CGG | + | chr5_3:21125860-21125879 | Msa0804850:intron | 25.0% |
| !! | GGATTCAATAATTTTTCTGT+AGG | + | chr5_3:21125901-21125920 | Msa0804850:intron | 25.0% |
| ! | ATGGTTTAAAAGATGAAAAG+TGG | - | chr5_3:21125986-21126005 | None:intergenic | 25.0% |
| !! | CTTTTCATCTTTTAAACCAT+TGG | + | chr5_3:21125986-21126005 | Msa0804850:intron | 25.0% |
| !!! | TGAGATTGTTTTTTTTTAGG+GGG | + | chr5_3:21126197-21126216 | Msa0804850:intron | 25.0% |
| ! | AGTGGTATTCAAATGATTAA+AGG | + | chr5_3:21126413-21126432 | Msa0804850:intron | 25.0% |
| ! | CAAAATTCTTATGATAAGTC+AGG | + | chr5_3:21126586-21126605 | Msa0804850:intron | 25.0% |
| ! | TCTGTATATATCATGAAGTT+TGG | - | chr5_3:21126617-21126636 | None:intergenic | 25.0% |
| ! | AAAATTCATGATGCATTGTT+TGG | + | chr5_3:21126636-21126655 | Msa0804850:intron | 25.0% |
| ! | GAACAGAATATCAGAAAAAA+TGG | - | chr5_3:21126715-21126734 | None:intergenic | 25.0% |
| !!! | TTGTTTTCAAGAACAGTTTA+AGG | + | chr5_3:21126892-21126911 | Msa0804850:intron | 25.0% |
| !!! | AGTGTTTTAGTGAGTTTTTA+AGG | + | chr5_3:21127115-21127134 | Msa0804850:intron | 25.0% |
| !! | TAGCATCAAATAATTTGCAA+TGG | - | chr5_3:21127318-21127337 | None:intergenic | 25.0% |
| !! | TGATGCTAAGAACATTTTTA+TGG | + | chr5_3:21127330-21127349 | Msa0804850:intron | 25.0% |
| ! | TAAAGAAGTAACTACATACA+GGG | - | chr5_3:21128150-21128169 | None:intergenic | 25.0% |
| ! | ATAAAGAAGTAACTACATAC+AGG | - | chr5_3:21128151-21128170 | None:intergenic | 25.0% |
| AACCATTAGTGAATCAAGTT+TGG | + | chr5_3:21120471-21120490 | Msa0804850:intron | 30.0% | |
| AACCAAACTTGATTCACTAA+TGG | - | chr5_3:21120476-21120495 | None:intergenic | 30.0% | |
| CTTGATATTGATATGAAGTC+TGG | + | chr5_3:21120569-21120588 | Msa0804850:intron | 30.0% | |
| ! | AATATTGATGGATCACATGT+TGG | - | chr5_3:21120610-21120629 | None:intergenic | 30.0% |
| AAATCACATCCCATTCAATA+GGG | - | chr5_3:21120679-21120698 | None:intergenic | 30.0% | |
| AAAATCACATCCCATTCAAT+AGG | - | chr5_3:21120680-21120699 | None:intergenic | 30.0% | |
| ! | TGAAAAGTGGTAAATTTTCG+TGG | + | chr5_3:21120908-21120927 | Msa0804850:intron | 30.0% |
| AGACTCTAATATGAAGTCAA+TGG | - | chr5_3:21120986-21121005 | None:intergenic | 30.0% | |
| TGTTATCAACAAAACCTTAG+AGG | + | chr5_3:21121209-21121228 | Msa0804850:intron | 30.0% | |
| AATTTACTGTCCCAAATTAG+GGG | - | chr5_3:21121480-21121499 | None:intergenic | 30.0% | |
| CAAATCTAAATGACATCGTT+AGG | + | chr5_3:21121589-21121608 | Msa0804850:intron | 30.0% | |
| ! | TGAACAAATGTGATTTTGGA+TGG | - | chr5_3:21121901-21121920 | None:intergenic | 30.0% |
| TCGTGAGATCATTAGAATTA+CGG | - | chr5_3:21121924-21121943 | None:intergenic | 30.0% | |
| CTAAATAGATTAGTAGATGG+AGG | - | chr5_3:21121976-21121995 | None:intergenic | 30.0% | |
| CTCCATCTACTAATCTATTT+AGG | + | chr5_3:21121974-21121993 | Msa0804850:intron | 30.0% | |
| GTCCTAAATAGATTAGTAGA+TGG | - | chr5_3:21121979-21121998 | None:intergenic | 30.0% | |
| !! | TTTTACTAATTTGCCCCTTT+AGG | + | chr5_3:21122015-21122034 | Msa0804850:intron | 30.0% |
| ! | TTTACTAATTTGCCCCTTTA+GGG | + | chr5_3:21122016-21122035 | Msa0804850:intron | 30.0% |
| TTACAAAAATACCCCTAAAG+GGG | - | chr5_3:21122031-21122050 | None:intergenic | 30.0% | |
| !! | GTTGGCTTTACCTATATATA+TGG | + | chr5_3:21122062-21122081 | Msa0804850:intron | 30.0% |
| ! | AGGTTTTTCACTGTATATAC+AGG | + | chr5_3:21122265-21122284 | Msa0804850:intron | 30.0% |
| ! | TTTTTCACTGTATATACAGG+AGG | + | chr5_3:21122268-21122287 | Msa0804850:CDS | 30.0% |
| TGAAGAAAAACTGAAGAAGA+AGG | - | chr5_3:21122377-21122396 | None:intergenic | 30.0% | |
| ! | TTTTCTTCATCATCGATCAA+AGG | + | chr5_3:21122388-21122407 | Msa0804850:CDS | 30.0% |
| !!! | GTGGGTTTTTGATTTTTGAT+CGG | + | chr5_3:21122410-21122429 | Msa0804850:intron | 30.0% |
| !! | TGTTTGTTGTTAATCGATTG+AGG | + | chr5_3:21122504-21122523 | Msa0804850:intron | 30.0% |
| ACAAACAAAAACAAAACACC+AGG | - | chr5_3:21122562-21122581 | None:intergenic | 30.0% | |
| AATTGTGTTTCAAATCCAAG+TGG | + | chr5_3:21122686-21122705 | Msa0804850:intron | 30.0% | |
| ! | GGTTCAAATTCTAGGAAAAT+TGG | + | chr5_3:21122719-21122738 | Msa0804850:intron | 30.0% |
| TTCTAATGGTTCTTCTTCAA+CGG | + | chr5_3:21122745-21122764 | Msa0804850:intron | 30.0% | |
| !! | GACGAATTTTTCGAAGAATT+TGG | + | chr5_3:21122772-21122791 | Msa0804850:intron | 30.0% |
| ATTATGGTAGAATGTAGACT+TGG | - | chr5_3:21122889-21122908 | None:intergenic | 30.0% | |
| AAGTCTACATTCTACCATAA+TGG | + | chr5_3:21122888-21122907 | Msa0804850:intron | 30.0% | |
| AGTCTACATTCTACCATAAT+GGG | + | chr5_3:21122889-21122908 | Msa0804850:intron | 30.0% | |
| ATTAAAATCCACAACTCTAC+AGG | + | chr5_3:21122924-21122943 | Msa0804850:intron | 30.0% | |
| ATATTATACCTGTAGAGTTG+TGG | - | chr5_3:21122935-21122954 | None:intergenic | 30.0% | |
| ! | GTAGTAGTAATGATAACGAT+CGG | + | chr5_3:21123025-21123044 | Msa0804850:intron | 30.0% |
| !! | TAAACTTGCTAGCATAATTG+AGG | + | chr5_3:21123195-21123214 | Msa0804850:intron | 30.0% |
| AAAAGTCAGTGCAATAAATC+TGG | - | chr5_3:21123508-21123527 | None:intergenic | 30.0% | |
| ! | TAAAAATAAACTAAGGGCGT+TGG | + | chr5_3:21123575-21123594 | Msa0804850:CDS | 30.0% |
| TGGGATTACAAATAAGAAGA+AGG | + | chr5_3:21123614-21123633 | Msa0804850:CDS | 30.0% | |
| GGGATTACAAATAAGAAGAA+GGG | + | chr5_3:21123615-21123634 | Msa0804850:CDS | 30.0% | |
| CTTATGAATCAAAGAGAAAC+GGG | - | chr5_3:21123735-21123754 | None:intergenic | 30.0% | |
| GACCTTTATATACAGAAAAG+TGG | + | chr5_3:21123813-21123832 | Msa0804850:intron | 30.0% | |
| !! | CTCCACTTTTCTGTATATAA+AGG | - | chr5_3:21123818-21123837 | None:intergenic | 30.0% |
| CTTTATATACAGAAAAGTGG+AGG | + | chr5_3:21123816-21123835 | Msa0804850:intron | 30.0% | |
| CAAAGTCCAAACCTTATATA+TGG | - | chr5_3:21123902-21123921 | None:intergenic | 30.0% | |
| CATATATAAGGTTTGGACTT+TGG | + | chr5_3:21123900-21123919 | Msa0804850:CDS | 30.0% | |
| GTGTTAATCTATGTAGTTGT+AGG | + | chr5_3:21124086-21124105 | Msa0804850:intron | 30.0% | |
| ! | AGTTGTAGGGAAAATTTTCA+TGG | + | chr5_3:21124100-21124119 | Msa0804850:intron | 30.0% |
| !! | GGAAGTTTGTTCCATTTTTA+AGG | + | chr5_3:21124131-21124150 | Msa0804850:intron | 30.0% |
| CTGTACTGCATTTATTTGTA+AGG | + | chr5_3:21124266-21124285 | Msa0804850:intron | 30.0% | |
| ! | ATCAAACTTTCCCTTTTGTA+AGG | + | chr5_3:21124390-21124409 | Msa0804850:intron | 30.0% |
| ! | TCAAACTTTCCCTTTTGTAA+GGG | + | chr5_3:21124391-21124410 | Msa0804850:intron | 30.0% |
| ATTCACAAACCCTTACAAAA+GGG | - | chr5_3:21124403-21124422 | None:intergenic | 30.0% | |
| TATTCACAAACCCTTACAAA+AGG | - | chr5_3:21124404-21124423 | None:intergenic | 30.0% | |
| TTGTGAATAAACTGTTCCTT+TGG | + | chr5_3:21124415-21124434 | Msa0804850:intron | 30.0% | |
| ! | TGTAATGTGTATCTTTTCAC+TGG | + | chr5_3:21124639-21124658 | Msa0804850:intron | 30.0% |
| CTTTGATGGAATGCAAATAT+TGG | - | chr5_3:21124742-21124761 | None:intergenic | 30.0% | |
| GCACTATTATAGAACTTTGA+TGG | - | chr5_3:21124756-21124775 | None:intergenic | 30.0% | |
| GGTCAATGTCATTAGAAAAA+TGG | + | chr5_3:21125056-21125075 | Msa0804850:intron | 30.0% | |
| ! | AAGTGTGTGGATTATGTTAA+AGG | + | chr5_3:21125133-21125152 | Msa0804850:intron | 30.0% |
| ! | AGTGTGTGGATTATGTTAAA+GGG | + | chr5_3:21125134-21125153 | Msa0804850:intron | 30.0% |
| GGAACCTATTGATACTAATA+AGG | + | chr5_3:21125284-21125303 | Msa0804850:intron | 30.0% | |
| !! | TTGGCCTTATTAGTATCAAT+AGG | - | chr5_3:21125291-21125310 | None:intergenic | 30.0% |
| ATTATGTGATGAGGTAGAAA+AGG | - | chr5_3:21125505-21125524 | None:intergenic | 30.0% | |
| TTAGAGTAAAAGGAAGAAGT+TGG | - | chr5_3:21125962-21125981 | None:intergenic | 30.0% | |
| ! | GAAAAGTGGTTTAGAGTAAA+AGG | - | chr5_3:21125972-21125991 | None:intergenic | 30.0% |
| ! | TTTTAAACCATTGGAGACAA+TGG | + | chr5_3:21125995-21126014 | Msa0804850:intron | 30.0% |
| ! | AAATTTGACAGGTTTGTTTG+TGG | + | chr5_3:21126071-21126090 | Msa0804850:intron | 30.0% |
| !! | TTGTGTCCTTTTGTTATGAT+TGG | + | chr5_3:21126119-21126138 | Msa0804850:intron | 30.0% |
| TATAGCAATGATAGGTCATT+TGG | + | chr5_3:21126272-21126291 | Msa0804850:intron | 30.0% | |
| ATAGCAATGATAGGTCATTT+GGG | + | chr5_3:21126273-21126292 | Msa0804850:intron | 30.0% | |
| ! | CTATAAAGAAAGCATACACA+TGG | + | chr5_3:21126688-21126707 | Msa0804850:intron | 30.0% |
| ! | TCTATTTTATTATCGGTGAC+AGG | + | chr5_3:21126733-21126752 | Msa0804850:intron | 30.0% |
| GTTTAATTCACAAACCTTCA+AGG | - | chr5_3:21127037-21127056 | None:intergenic | 30.0% | |
| TAAAAAAGGATGTTAGACAC+CGG | - | chr5_3:21127189-21127208 | None:intergenic | 30.0% | |
| ! | TTGCAGATTTTATGTTTGCA+TGG | + | chr5_3:21127209-21127228 | Msa0804850:intron | 30.0% |
| TTATCCAGTGTATTCAAAGA+TGG | - | chr5_3:21127245-21127264 | None:intergenic | 30.0% | |
| ACATTAAATGGCTATGTAAC+TGG | + | chr5_3:21127282-21127301 | Msa0804850:intron | 30.0% | |
| GGGAAAAAAGATCTTTAACT+TGG | - | chr5_3:21127366-21127385 | None:intergenic | 30.0% | |
| ! | TGATGGATATACATTTAGAC+AGG | + | chr5_3:21127768-21127787 | Msa0804850:CDS | 30.0% |
| ! | TTGTGATGGAAGGATATAAT+TGG | + | chr5_3:21127851-21127870 | Msa0804850:CDS | 30.0% |
| ACCAATAGAATTGACACAAT+TGG | + | chr5_3:21128305-21128324 | Msa0804850:three_prime_UTR | 30.0% | |
| TCCAATTGTGTCAATTCTAT+TGG | - | chr5_3:21128309-21128328 | None:intergenic | 30.0% | |
| !!! | TTATTTTTGATAGGAGCAAG+CGG | + | chr5_3:21128334-21128353 | Msa0804850:three_prime_UTR | 30.0% |
| GTTGGTTGTAGTTTAGATAG+AGG | - | chr5_3:21120508-21120527 | None:intergenic | 35.0% | |
| AGAAATGAGAGACAAAGTGA+TGG | - | chr5_3:21120532-21120551 | None:intergenic | 35.0% | |
| TTTGTCTCTCATTTCTCAAG+AGG | + | chr5_3:21120536-21120555 | Msa0804850:intron | 35.0% | |
| TTGTCTCTCATTTCTCAAGA+GGG | + | chr5_3:21120537-21120556 | Msa0804850:intron | 35.0% | |
| ! | TCCCTTTTCTCTTTTTACCA+TGG | + | chr5_3:21120646-21120665 | Msa0804850:intron | 35.0% |
| CCCATGGTAAAAAGAGAAAA+GGG | - | chr5_3:21120650-21120669 | None:intergenic | 35.0% | |
| ! | CCCTTTTCTCTTTTTACCAT+GGG | + | chr5_3:21120647-21120666 | Msa0804850:intron | 35.0% |
| ACCCATGGTAAAAAGAGAAA+AGG | - | chr5_3:21120651-21120670 | None:intergenic | 35.0% | |
| !! | CGGTTAGATATTGGTTTACT+TGG | + | chr5_3:21120838-21120857 | Msa0804850:intron | 35.0% |
| !! | TGTTGATCTGAGTTGATCAA+TGG | + | chr5_3:21120938-21120957 | Msa0804850:intron | 35.0% |
| !!! | TTTTTGAGGCTCATTGCTTT+TGG | - | chr5_3:21121318-21121337 | None:intergenic | 35.0% |
| !!! | TTTTTTATTTAAGTGGGGGG+TGG | - | chr5_3:21121359-21121378 | None:intergenic | 35.0% |
| !!! | TAGACTCTAGTTCTCCTTTT+GGG | + | chr5_3:21121429-21121448 | Msa0804850:intron | 35.0% |
| !!! | TCTCCTTTTGGGACATAAAT+CGG | + | chr5_3:21121440-21121459 | Msa0804850:intron | 35.0% |
| TATCAAACCACCCCTAATTT+GGG | + | chr5_3:21121467-21121486 | Msa0804850:intron | 35.0% | |
| ! | ATTTGTCACTCCTTTGTTGT+GGG | - | chr5_3:21121574-21121593 | None:intergenic | 35.0% |
| GAATGCACAACCAAGAAAAT+GGG | + | chr5_3:21121809-21121828 | Msa0804850:intron | 35.0% | |
| AATGCACAACCAAGAAAATG+GGG | + | chr5_3:21121810-21121829 | Msa0804850:intron | 35.0% | |
| !!! | TTTTTTTGGCCCCATTTTCT+TGG | - | chr5_3:21121822-21121841 | None:intergenic | 35.0% |
| ! | TGTGATTTTGGATGGTTCAA+AGG | - | chr5_3:21121893-21121912 | None:intergenic | 35.0% |
| ! | ACGGTGAACAAATGTGATTT+TGG | - | chr5_3:21121905-21121924 | None:intergenic | 35.0% |
| ! | TTACTAATTTGCCCCTTTAG+GGG | + | chr5_3:21122017-21122036 | Msa0804850:intron | 35.0% |
| GAGAAAGATGATGAAGTAGT+GGG | - | chr5_3:21122114-21122133 | None:intergenic | 35.0% | |
| TGAGAAAGATGATGAAGTAG+TGG | - | chr5_3:21122115-21122134 | None:intergenic | 35.0% | |
| ACCTTAGAACAACAAAGAAC+CGG | - | chr5_3:21122178-21122197 | None:intergenic | 35.0% | |
| !! | GTTCTTTGTTGTTCTAAGGT+TGG | + | chr5_3:21122178-21122197 | Msa0804850:intron | 35.0% |
| ! | TGCTTTGTTGACAATTCATC+AGG | + | chr5_3:21122245-21122264 | Msa0804850:intron | 35.0% |
| ! | GGATTCTGAGAAATTGAGAA+AGG | + | chr5_3:21122335-21122354 | Msa0804850:CDS | 35.0% |
| AGAAAAACTGAAGAAGAAGG+TGG | - | chr5_3:21122374-21122393 | None:intergenic | 35.0% | |
| CTCAATCGCACAAAAGAAAA+AGG | - | chr5_3:21122482-21122501 | None:intergenic | 35.0% | |
| !! | GTTCTACTGGTTCAAATTCT+AGG | + | chr5_3:21122711-21122730 | Msa0804850:intron | 35.0% |
| !! | TTTTCGAAGAATTTGGCTTC+TGG | + | chr5_3:21122779-21122798 | Msa0804850:intron | 35.0% |
| TGTAAACAATTCAGAACCCT+TGG | - | chr5_3:21122841-21122860 | None:intergenic | 35.0% | |
| !! | ACATTCTACCATAATGGGTT+TGG | + | chr5_3:21122894-21122913 | Msa0804850:intron | 35.0% |
| TGATGAATCCAAACCCATTA+TGG | - | chr5_3:21122905-21122924 | None:intergenic | 35.0% | |
| TGTTTGGATAGCCATATTCA+AGG | + | chr5_3:21122990-21123009 | Msa0804850:intron | 35.0% | |
| CGTTATCATTACTACTACCA+TGG | - | chr5_3:21123023-21123042 | None:intergenic | 35.0% | |
| CTTGATATCGTTGAGAATTG+TGG | + | chr5_3:21123061-21123080 | Msa0804850:intron | 35.0% | |
| GTCTAATTCGACTGCAATTT+AGG | - | chr5_3:21123108-21123127 | None:intergenic | 35.0% | |
| !!! | TGTTGTTTTGTAGGTCAAGA+TGG | + | chr5_3:21123154-21123173 | Msa0804850:intron | 35.0% |
| ATTGAGGTTTCTGCAAAGAA+AGG | + | chr5_3:21123211-21123230 | Msa0804850:intron | 35.0% | |
| ATTGGTTGCCTGATTCTATA+GGG | + | chr5_3:21123278-21123297 | Msa0804850:intron | 35.0% | |
| ACAGCCACAGTTGTAAAAAT+TGG | + | chr5_3:21123402-21123421 | Msa0804850:intron | 35.0% | |
| CAGCCACAGTTGTAAAAATT+GGG | + | chr5_3:21123403-21123422 | Msa0804850:intron | 35.0% | |
| AAATTGGGCTCATGACATAT+TGG | + | chr5_3:21123418-21123437 | Msa0804850:intron | 35.0% | |
| !! | GTTAATTAAGGTTTTGGCCA+TGG | + | chr5_3:21123533-21123552 | Msa0804850:intron | 35.0% |
| GAAGAAGGGTCAAAAGAATA+AGG | + | chr5_3:21123629-21123648 | Msa0804850:CDS | 35.0% | |
| CAAAAGAATAAGGACAGGTA+TGG | + | chr5_3:21123639-21123658 | Msa0804850:intron | 35.0% | |
| AAGGAGGAAAATTACACACA+CGG | - | chr5_3:21123687-21123706 | None:intergenic | 35.0% | |
| AGACGAAATGAAAGTTTGCA+AGG | - | chr5_3:21123706-21123725 | None:intergenic | 35.0% | |
| GTCCAAACCTTATATATGGA+GGG | - | chr5_3:21123898-21123917 | None:intergenic | 35.0% | |
| AGTCCAAACCTTATATATGG+AGG | - | chr5_3:21123899-21123918 | None:intergenic | 35.0% | |
| !! | TAAGGTTTGGACTTTGGTTT+TGG | + | chr5_3:21123906-21123925 | Msa0804850:CDS | 35.0% |
| !!! | TGGTTTTGGATACTTCAAGA+TGG | + | chr5_3:21123920-21123939 | Msa0804850:CDS | 35.0% |
| CAGAAACTGTAAAAGAACCA+AGG | + | chr5_3:21123943-21123962 | Msa0804850:intron | 35.0% | |
| TGTAAAAGAACCAAGGTCAT+TGG | + | chr5_3:21123950-21123969 | Msa0804850:intron | 35.0% | |
| ! | GTAGGGAAAATTTTCATGGT+AGG | + | chr5_3:21124104-21124123 | Msa0804850:intron | 35.0% |
| ACCACGCTTAAATATTTGCT+AGG | - | chr5_3:21124203-21124222 | None:intergenic | 35.0% | |
| !!! | AGCGTGGTTAGATTCTTTTT+TGG | + | chr5_3:21124215-21124234 | Msa0804850:intron | 35.0% |
| CATATCAGAATTCACACCAA+AGG | - | chr5_3:21124434-21124453 | None:intergenic | 35.0% | |
| TTGGTGTGAATTCTGATATG+TGG | + | chr5_3:21124434-21124453 | Msa0804850:intron | 35.0% | |
| !!! | TTTTCAGAGTTGATGTTGCT+CGG | + | chr5_3:21124675-21124694 | Msa0804850:intron | 35.0% |
| !!! | AAAGTAAAGGAAGGGTGTTT+TGG | + | chr5_3:21124926-21124945 | Msa0804850:intron | 35.0% |
| ATAGGTTCCTTGATAAACAC+CGG | - | chr5_3:21125273-21125292 | None:intergenic | 35.0% | |
| AAGCTTCTTCTAAATCGATC+TGG | - | chr5_3:21125362-21125381 | None:intergenic | 35.0% | |
| GAAGCAATAGAGTTTGATAG+AGG | - | chr5_3:21125420-21125439 | None:intergenic | 35.0% | |
| TGAAAACAAACTTGCAGTCA+AGG | + | chr5_3:21125524-21125543 | Msa0804850:intron | 35.0% | |
| GCAAAATATTTCAGAGTCCT+TGG | + | chr5_3:21125641-21125660 | Msa0804850:intron | 35.0% | |
| CACAATTCCTCGAGAAATTT+CGG | + | chr5_3:21125691-21125710 | Msa0804850:CDS | 35.0% | |
| ! | CTTTTGCCTATTGTGTTTCT+TGG | - | chr5_3:21125717-21125736 | None:intergenic | 35.0% |
| !!! | CTTTTTTCCATTGTCTCCAA+TGG | - | chr5_3:21126005-21126024 | None:intergenic | 35.0% |
| GTGGTATGAATGAAAAATGC+AGG | + | chr5_3:21126090-21126109 | Msa0804850:intron | 35.0% | |
| CTGCAACCAATCATAACAAA+AGG | - | chr5_3:21126128-21126147 | None:intergenic | 35.0% | |
| TAGCTGTGTCTTCTTATGAT+TGG | + | chr5_3:21126168-21126187 | Msa0804850:intron | 35.0% | |
| TAGAACATATAACAGCACAG+AGG | - | chr5_3:21126822-21126841 | None:intergenic | 35.0% | |
| TTAGGATCCCTAATGAAGAT+TGG | + | chr5_3:21126965-21126984 | Msa0804850:intron | 35.0% | |
| ACTGCTTCCAATCTTCATTA+GGG | - | chr5_3:21126975-21126994 | None:intergenic | 35.0% | |
| TACTGCTTCCAATCTTCATT+AGG | - | chr5_3:21126976-21126995 | None:intergenic | 35.0% | |
| ATTCACAAACCTTCAAGGAA+GGG | - | chr5_3:21127032-21127051 | None:intergenic | 35.0% | |
| AATTCACAAACCTTCAAGGA+AGG | - | chr5_3:21127033-21127052 | None:intergenic | 35.0% | |
| AGATCTTTCTCAGTATTCTG+TGG | + | chr5_3:21127090-21127109 | Msa0804850:intron | 35.0% | |
| AGAAAGAGTTGTTAAGTGTG+TGG | + | chr5_3:21127144-21127163 | Msa0804850:intron | 35.0% | |
| ! | CAGATTTTATGTTTGCATGG+AGG | + | chr5_3:21127212-21127231 | Msa0804850:intron | 35.0% |
| !!! | ATCTTTTTTCCCCTGAAGTA+TGG | + | chr5_3:21127374-21127393 | Msa0804850:intron | 35.0% |
| ACTTTGCATACCATACTTCA+GGG | - | chr5_3:21127387-21127406 | None:intergenic | 35.0% | |
| TACTTTGCATACCATACTTC+AGG | - | chr5_3:21127388-21127407 | None:intergenic | 35.0% | |
| ! | AAGTAAAATTGTCACTTGCC+AGG | - | chr5_3:21127656-21127675 | None:intergenic | 35.0% |
| !! | ACTCTTTTAGGAGAAGAATG+TGG | + | chr5_3:21127954-21127973 | Msa0804850:intron | 35.0% |
| CTCCAAATTACTGCTAATGT+GGG | + | chr5_3:21127992-21128011 | Msa0804850:exon | 35.0% | |
| TTCCCACATTAGCAGTAATT+TGG | - | chr5_3:21127997-21128016 | None:intergenic | 35.0% | |
| TTACTGCTAATGTGGGAATA+TGG | + | chr5_3:21127999-21128018 | Msa0804850:exon | 35.0% | |
| GAGGAGTTTCATTGTTTAAG+TGG | + | chr5_3:21128203-21128222 | Msa0804850:three_prime_UTR | 35.0% | |
| GAGTTTCATTGTTTAAGTGG+TGG | + | chr5_3:21128206-21128225 | Msa0804850:three_prime_UTR | 35.0% | |
| TTTCATTGTTTAAGTGGTGG+AGG | + | chr5_3:21128209-21128228 | Msa0804850:three_prime_UTR | 35.0% | |
| ! | TTCATTGTTTAAGTGGTGGA+GGG | + | chr5_3:21128210-21128229 | Msa0804850:three_prime_UTR | 35.0% |
| !!! | CTGCTGCTGTTTTTCTTATT+TGG | + | chr5_3:21128275-21128294 | Msa0804850:three_prime_UTR | 35.0% |
| GGTAAAAAGAGAAAAGGGAG+AGG | - | chr5_3:21120645-21120664 | None:intergenic | 40.0% | |
| !! | CAATGGTCAACATTTTGACG+AGG | - | chr5_3:21120969-21120988 | None:intergenic | 40.0% |
| TACGTATCAGAGCTTTGCAT+CGG | + | chr5_3:21121060-21121079 | Msa0804850:intron | 40.0% | |
| !! | TGACTCTGAAGTCAACATTC+TGG | - | chr5_3:21121123-21121142 | None:intergenic | 40.0% |
| !!! | CTAGACTCTAGTTCTCCTTT+TGG | + | chr5_3:21121428-21121447 | Msa0804850:intron | 40.0% |
| CATCCGATTTATGTCCCAAA+AGG | - | chr5_3:21121446-21121465 | None:intergenic | 40.0% | |
| CTATCAAACCACCCCTAATT+TGG | + | chr5_3:21121466-21121485 | Msa0804850:intron | 40.0% | |
| TGTGGGAAAGGGATAATGAA+TGG | - | chr5_3:21121557-21121576 | None:intergenic | 40.0% | |
| TTATCCCTTTCCCACAACAA+AGG | + | chr5_3:21121561-21121580 | Msa0804850:intron | 40.0% | |
| GATTTGTCACTCCTTTGTTG+TGG | - | chr5_3:21121575-21121594 | None:intergenic | 40.0% | |
| !! | ACATCCATGAAATGATGGGT+GGG | - | chr5_3:21121783-21121802 | None:intergenic | 40.0% |
| ! | AACATCCATGAAATGATGGG+TGG | - | chr5_3:21121784-21121803 | None:intergenic | 40.0% |
| ACCCATCATTTCATGGATGT+TGG | + | chr5_3:21121783-21121802 | Msa0804850:intron | 40.0% | |
| CCCAACATCCATGAAATGAT+GGG | - | chr5_3:21121787-21121806 | None:intergenic | 40.0% | |
| CCCATCATTTCATGGATGTT+GGG | + | chr5_3:21121784-21121803 | Msa0804850:intron | 40.0% | |
| TCCCAACATCCATGAAATGA+TGG | - | chr5_3:21121788-21121807 | None:intergenic | 40.0% | |
| CGAATGCACAACCAAGAAAA+TGG | + | chr5_3:21121808-21121827 | Msa0804850:intron | 40.0% | |
| ! | ATGATGAAGTAGTGGGAATG+AGG | - | chr5_3:21122107-21122126 | None:intergenic | 40.0% |
| TCTTTCTCATCACTTGAGTC+CGG | + | chr5_3:21122126-21122145 | Msa0804850:intron | 40.0% | |
| !! | TCCGGTTCTTTGTTGTTCTA+AGG | + | chr5_3:21122174-21122193 | Msa0804850:intron | 40.0% |
| TCTTCATCATCGATCAAAGG+TGG | + | chr5_3:21122391-21122410 | Msa0804850:CDS | 40.0% | |
| CTTCATCATCGATCAAAGGT+GGG | + | chr5_3:21122392-21122411 | Msa0804850:CDS | 40.0% | |
| !!! | TGCATGTTTTTGTTTTGGCC+TGG | + | chr5_3:21122541-21122560 | Msa0804850:intron | 40.0% |
| AACAAAAACCCAGCAACATG+AGG | - | chr5_3:21122586-21122605 | None:intergenic | 40.0% | |
| TGTGTTTCAAATCCAAGTGG+TGG | + | chr5_3:21122689-21122708 | Msa0804850:intron | 40.0% | |
| ATCTTTCTCAACACGAACCA+AGG | - | chr5_3:21122811-21122830 | None:intergenic | 40.0% | |
| ! | TGAGAAAGATGTTTCTGCCA+AGG | + | chr5_3:21122821-21122840 | Msa0804850:intron | 40.0% |
| ! | GAGAAAGATGTTTCTGCCAA+GGG | + | chr5_3:21122822-21122841 | Msa0804850:intron | 40.0% |
| GCAGTCGAATTAGACTTTGA+TGG | + | chr5_3:21123113-21123132 | Msa0804850:intron | 40.0% | |
| TTGATGGAATGTTGTGCTGA+TGG | + | chr5_3:21123129-21123148 | Msa0804850:intron | 40.0% | |
| ! | TGATGGAATGTTGTGCTGAT+GGG | + | chr5_3:21123130-21123149 | Msa0804850:intron | 40.0% |
| !!! | CTGATGGGATGTTGTTTTGT+AGG | + | chr5_3:21123145-21123164 | Msa0804850:intron | 40.0% |
| !! | AGTTGATGGACCAAGTTGAT+TGG | + | chr5_3:21123260-21123279 | Msa0804850:intron | 40.0% |
| AATCAGGCAACCAATCAACT+TGG | - | chr5_3:21123273-21123292 | None:intergenic | 40.0% | |
| ! | GATTGGTTGCCTGATTCTAT+AGG | + | chr5_3:21123277-21123296 | Msa0804850:intron | 40.0% |
| GATAACCTCCCTATAGAATC+AGG | - | chr5_3:21123289-21123308 | None:intergenic | 40.0% | |
| AGGTTATCTAGCCTGATTCT+TGG | + | chr5_3:21123301-21123320 | Msa0804850:intron | 40.0% | |
| TCCTTGAGTGCTAGGAATTA+TGG | + | chr5_3:21123377-21123396 | Msa0804850:intron | 40.0% | |
| ACCATAATTCCTAGCACTCA+AGG | - | chr5_3:21123381-21123400 | None:intergenic | 40.0% | |
| ! | GAGCCCAATTTTTACAACTG+TGG | - | chr5_3:21123409-21123428 | None:intergenic | 40.0% |
| AGGGTCAAAAGAATAAGGAC+AGG | + | chr5_3:21123634-21123653 | Msa0804850:CDS | 40.0% | |
| CGAAATGAAAGTTTGCAAGG+AGG | - | chr5_3:21123703-21123722 | None:intergenic | 40.0% | |
| GAACTTGATCTGCAGATAAC+AGG | + | chr5_3:21123862-21123881 | Msa0804850:CDS | 40.0% | |
| TGCAGATAACAGGAACTGAA+AGG | + | chr5_3:21123872-21123891 | Msa0804850:CDS | 40.0% | |
| TGAAAGGCCCTCCATATATA+AGG | + | chr5_3:21123888-21123907 | Msa0804850:CDS | 40.0% | |
| TGTTGTTGTCTCTTTGCTTG+TGG | + | chr5_3:21123992-21124011 | Msa0804850:intron | 40.0% | |
| GCCTAGCAAATATTTAAGCG+TGG | + | chr5_3:21124199-21124218 | Msa0804850:intron | 40.0% | |
| TTCTCTACAGCTTCAAGCAA+AGG | - | chr5_3:21124500-21124519 | None:intergenic | 40.0% | |
| GCTGTAGAGAAGATGAAAGA+AGG | + | chr5_3:21124509-21124528 | Msa0804850:CDS | 40.0% | |
| ATACAATGCAGAGGTCAGTA+AGG | - | chr5_3:21124611-21124630 | None:intergenic | 40.0% | |
| AGATGTAGCAGTAAGTACGA+GGG | - | chr5_3:21124709-21124728 | None:intergenic | 40.0% | |
| TCAATCTCAGATCTAGTGCA+CGG | - | chr5_3:21124786-21124805 | None:intergenic | 40.0% | |
| TTCACTAACAACAGGTCCTT+CGG | - | chr5_3:21124832-21124851 | None:intergenic | 40.0% | |
| TACTAAGCCGGTGTTTATCA+AGG | + | chr5_3:21125263-21125282 | Msa0804850:intron | 40.0% | |
| TAACTGTGATCATGCTGACA+TGG | + | chr5_3:21125461-21125480 | Msa0804850:intron | 40.0% | |
| TATCACCAAAATACTCGCCA+AGG | - | chr5_3:21125661-21125680 | None:intergenic | 40.0% | |
| TTTCGGCCAAGAAACACAAT+AGG | + | chr5_3:21125708-21125727 | Msa0804850:CDS | 40.0% | |
| GACATGAATCAGTCACACAA+AGG | - | chr5_3:21125840-21125859 | None:intergenic | 40.0% | |
| AGATCGACAACTTGCATTTC+AGG | + | chr5_3:21126027-21126046 | Msa0804850:intron | 40.0% | |
| TTGCAGAGTAGAATGAGTGA+TGG | + | chr5_3:21126142-21126161 | Msa0804850:intron | 40.0% | |
| TGCAGAGTAGAATGAGTGAT+GGG | + | chr5_3:21126143-21126162 | Msa0804850:intron | 40.0% | |
| TTATTATCGGTGACAGGTGA+AGG | + | chr5_3:21126739-21126758 | Msa0804850:intron | 40.0% | |
| GGTGAAGGAGATCTATTAAC+TGG | + | chr5_3:21126754-21126773 | Msa0804850:intron | 40.0% | |
| GAAGGAGATCTATTAACTGG+TGG | + | chr5_3:21126757-21126776 | Msa0804850:intron | 40.0% | |
| AGCACAGAGGCTAATCTAAT+TGG | - | chr5_3:21126809-21126828 | None:intergenic | 40.0% | |
| !! | AAGAGCTCTAGAGTGGAATA+GGG | + | chr5_3:21126942-21126961 | Msa0804850:intron | 40.0% |
| TGGAAAATTTCCTTCCCAAG+GGG | - | chr5_3:21127000-21127019 | None:intergenic | 40.0% | |
| CTGGAAAATTTCCTTCCCAA+GGG | - | chr5_3:21127001-21127020 | None:intergenic | 40.0% | |
| TCTGGAAAATTTCCTTCCCA+AGG | - | chr5_3:21127002-21127021 | None:intergenic | 40.0% | |
| ! | TTGGGAAGGAAATTTTCCAG+AGG | + | chr5_3:21127001-21127020 | Msa0804850:intron | 40.0% |
| !! | TGAGTGGATAGTGGTTTTAC+CGG | + | chr5_3:21127167-21127186 | Msa0804850:intron | 40.0% |
| CTCACCATCTTTGAATACAC+TGG | + | chr5_3:21127238-21127257 | Msa0804850:intron | 40.0% | |
| CTTTGCATACCATACTTCAG+GGG | - | chr5_3:21127386-21127405 | None:intergenic | 40.0% | |
| AGAGCATAGAGCACATAGTA+AGG | - | chr5_3:21127550-21127569 | None:intergenic | 40.0% | |
| ACTATGTGCTCTATGCTCTT+TGG | + | chr5_3:21127551-21127570 | Msa0804850:intron | 40.0% | |
| TGCCTAAAACTATGTCGTAG+AGG | + | chr5_3:21127614-21127633 | Msa0804850:intron | 40.0% | |
| ! | AGCCTCTACGACATAGTTTT+AGG | - | chr5_3:21127619-21127638 | None:intergenic | 40.0% |
| TATATATCTCCACGTGGTGA+TGG | + | chr5_3:21127751-21127770 | Msa0804850:CDS | 40.0% | |
| AATGTATATCCATCACCACG+TGG | - | chr5_3:21127763-21127782 | None:intergenic | 40.0% | |
| GCTCAGTTCAATCACACAAA+TGG | + | chr5_3:21127799-21127818 | Msa0804850:CDS | 40.0% | |
| TATATCCTTCCATCACAAGC+TGG | - | chr5_3:21127849-21127868 | None:intergenic | 40.0% | |
| GTCAATACATAGAGCGCAAT+AGG | - | chr5_3:21127920-21127939 | None:intergenic | 40.0% | |
| GCTCCAAATTACTGCTAATG+TGG | + | chr5_3:21127991-21128010 | Msa0804850:exon | 40.0% | |
| GTTCTCTCCAATTTCCAGAA+TGG | - | chr5_3:21128028-21128047 | None:intergenic | 40.0% | |
| ! | GAGAGACAAAGTGATGGTGT+TGG | - | chr5_3:21120526-21120545 | None:intergenic | 45.0% |
| TTCAATAGGGCTCAAACCCA+TGG | - | chr5_3:21120666-21120685 | None:intergenic | 45.0% | |
| TGGGTTTGAGCCCTATTGAA+TGG | + | chr5_3:21120666-21120685 | Msa0804850:intron | 45.0% | |
| GGGTTTGAGCCCTATTGAAT+GGG | + | chr5_3:21120667-21120686 | Msa0804850:intron | 45.0% | |
| !! | TTGAGGCTCATTGCTTTTGG+AGG | - | chr5_3:21121315-21121334 | None:intergenic | 45.0% |
| TTACTGTCCCAAATTAGGGG+TGG | - | chr5_3:21121477-21121496 | None:intergenic | 45.0% | |
| ! | CACTCCTTTGTTGTGGGAAA+GGG | - | chr5_3:21121568-21121587 | None:intergenic | 45.0% |
| ! | TCACTCCTTTGTTGTGGGAA+AGG | - | chr5_3:21121569-21121588 | None:intergenic | 45.0% |
| !! | TGAAATGATGGGTGGGATCA+GGG | - | chr5_3:21121776-21121795 | None:intergenic | 45.0% |
| !! | ATGAAATGATGGGTGGGATC+AGG | - | chr5_3:21121777-21121796 | None:intergenic | 45.0% |
| TGATCCCACCCATCATTTCA+TGG | + | chr5_3:21121776-21121795 | Msa0804850:intron | 45.0% | |
| GCTGCTATGGTGAAAGAAAC+CGG | - | chr5_3:21122148-21122167 | None:intergenic | 45.0% | |
| TCTTTCACCATAGCAGCTTC+TGG | + | chr5_3:21122151-21122170 | Msa0804850:intron | 45.0% | |
| TGAGAAACCTTCCGTTTCAG+TGG | + | chr5_3:21122301-21122320 | Msa0804850:CDS | 45.0% | |
| GAGAAACCTTCCGTTTCAGT+GGG | + | chr5_3:21122302-21122321 | Msa0804850:CDS | 45.0% | |
| TTGTTTGTGCCTCATGTTGC+TGG | + | chr5_3:21122574-21122593 | Msa0804850:intron | 45.0% | |
| TGTTTGTGCCTCATGTTGCT+GGG | + | chr5_3:21122575-21122594 | Msa0804850:intron | 45.0% | |
| ! | AATCCAAGTGGTGGTTCTAC+TGG | + | chr5_3:21122698-21122717 | Msa0804850:intron | 45.0% |
| !! | TTGGCTTCTGGTTTCTACCT+TGG | + | chr5_3:21122791-21122810 | Msa0804850:intron | 45.0% |
| TTTCATGGTCCTTGAGTGCT+AGG | + | chr5_3:21123369-21123388 | Msa0804850:intron | 45.0% | |
| ! | GGCTCATGACATATTGGCTA+CGG | + | chr5_3:21123424-21123443 | Msa0804850:intron | 45.0% |
| GTTCTTCCTCCACTTTACTG+AGG | - | chr5_3:21123846-21123865 | None:intergenic | 45.0% | |
| GGCCCTCCATATATAAGGTT+TGG | + | chr5_3:21123893-21123912 | Msa0804850:CDS | 45.0% | |
| CAAAGAGACAACAACAGACC+AGG | - | chr5_3:21123988-21124007 | None:intergenic | 45.0% | |
| CAGATGTAGCAGTAAGTACG+AGG | - | chr5_3:21124710-21124729 | None:intergenic | 45.0% | |
| CTCGTACTTACTGCTACATC+TGG | + | chr5_3:21124708-21124727 | Msa0804850:CDS | 45.0% | |
| ATCGAAGAGAATAGCTCCGA+AGG | + | chr5_3:21124813-21124832 | Msa0804850:CDS | 45.0% | |
| GAAGGACCTGTTGTTAGTGA+AGG | + | chr5_3:21124831-21124850 | Msa0804850:CDS | 45.0% | |
| ACCTGTTGTTAGTGAAGGAC+AGG | + | chr5_3:21124836-21124855 | Msa0804850:CDS | 45.0% | |
| ACCTGTCCTTCACTAACAAC+AGG | - | chr5_3:21124840-21124859 | None:intergenic | 45.0% | |
| TGAAAGGTTGCGTACTAAGC+CGG | + | chr5_3:21125251-21125270 | Msa0804850:intron | 45.0% | |
| TGACATGGCTGCACATGATA+TGG | + | chr5_3:21125476-21125495 | Msa0804850:intron | 45.0% | |
| ! | AGAGTCCTTGGCGAGTATTT+TGG | + | chr5_3:21125653-21125672 | Msa0804850:intron | 45.0% |
| TTCTTGGCCGAAATTTCTCG+AGG | - | chr5_3:21125701-21125720 | None:intergenic | 45.0% | |
| TAACTGCAGCACCAGATGAA+GGG | + | chr5_3:21125766-21125785 | Msa0804850:CDS | 45.0% | |
| TTTGTGAGTACCCCTTCATC+TGG | - | chr5_3:21125780-21125799 | None:intergenic | 45.0% | |
| ! | CTTCTTTGGAAGCTCATCAC+CGG | - | chr5_3:21125882-21125901 | None:intergenic | 45.0% |
| ! | CGACAACTTGCATTTCAGGT+TGG | + | chr5_3:21126031-21126050 | Msa0804850:intron | 45.0% |
| ! | TATGTGACAAGAGCATGCAG+TGG | + | chr5_3:21126395-21126414 | Msa0804850:intron | 45.0% |
| !! | AGCTTTCAAGAGCTCTAGAG+TGG | + | chr5_3:21126935-21126954 | Msa0804850:intron | 45.0% |
| !! | CAAGAGCTCTAGAGTGGAAT+AGG | + | chr5_3:21126941-21126960 | Msa0804850:intron | 45.0% |
| !! | CTCTAGAGTGGAATAGGGTT+AGG | + | chr5_3:21126947-21126966 | Msa0804850:intron | 45.0% |
| GTTGTTAAGTGTGTGGTGAG+TGG | + | chr5_3:21127151-21127170 | Msa0804850:intron | 45.0% | |
| ACTGGATAATATCTGCGCGT+TGG | + | chr5_3:21127256-21127275 | Msa0804850:intron | 45.0% | |
| GCGCGTTGGATCACATTAAA+TGG | + | chr5_3:21127270-21127289 | Msa0804850:intron | 45.0% | |
| ACTATGTCGTAGAGGCTAAC+TGG | + | chr5_3:21127622-21127641 | Msa0804850:intron | 45.0% | |
| GGCTAACTGGATATATAGCC+TGG | + | chr5_3:21127635-21127654 | Msa0804850:intron | 45.0% | |
| TCAATATAGGTCCCGCATGA+AGG | + | chr5_3:21127677-21127696 | Msa0804850:intron | 45.0% | |
| TCACACATTGGTCCTTCATG+CGG | - | chr5_3:21127692-21127711 | None:intergenic | 45.0% | |
| GACCAATGTGTGATCTCTTG+TGG | + | chr5_3:21127699-21127718 | Msa0804850:intron | 45.0% | |
| GACCACAAGAGATCACACAT+TGG | - | chr5_3:21127704-21127723 | None:intergenic | 45.0% | |
| TTGGGGTATATATCTCCACG+TGG | + | chr5_3:21127745-21127764 | Msa0804850:CDS | 45.0% | |
| !! | AGCTGGTGAGCTCTAGATAT+CGG | - | chr5_3:21127832-21127851 | None:intergenic | 45.0% |
| ! | GGAAGGATATAATTGGTGCC+AGG | + | chr5_3:21127858-21127877 | Msa0804850:CDS | 45.0% |
| ! | ATGGCTGCCATTCTGGAAAT+TGG | + | chr5_3:21128018-21128037 | Msa0804850:three_prime_UTR | 45.0% |
| TGCAGTTTGATCCAGCTCTA+AGG | + | chr5_3:21128064-21128083 | Msa0804850:three_prime_UTR | 45.0% | |
| GACTCAATTTGCCTTAGAGC+TGG | - | chr5_3:21128078-21128097 | None:intergenic | 45.0% | |
| TGACTCTACACGAAAGACAC+CGG | + | chr5_3:21128098-21128117 | Msa0804850:three_prime_UTR | 45.0% | |
| !!! | TTTCAAAAATATATTTTAAA+CGG | + | chr5_3:21120818-21120837 | Msa0804850:intron | 5.0% |
| !! | TTGCTTTTGGAGGCTCGACT+TGG | - | chr5_3:21121305-21121324 | None:intergenic | 50.0% |
| GTGGGATCAGGGATAGGAAT+AGG | - | chr5_3:21121765-21121784 | None:intergenic | 50.0% | |
| GAACCAGTAGAACCACCACT+TGG | - | chr5_3:21122704-21122723 | None:intergenic | 50.0% | |
| AACTCGTGATCTCAAGCTCC+AGG | + | chr5_3:21123234-21123253 | Msa0804850:intron | 50.0% | |
| ACTCGTGATCTCAAGCTCCA+GGG | + | chr5_3:21123235-21123254 | Msa0804850:intron | 50.0% | |
| GGTTGCCTGATTCTATAGGG+AGG | + | chr5_3:21123281-21123300 | Msa0804850:intron | 50.0% | |
| AGCAGGTGTCTTCTTCACCA+TGG | - | chr5_3:21123553-21123572 | None:intergenic | 50.0% | |
| GGAGGAAGACCTCAGTAAAG+TGG | + | chr5_3:21123834-21123853 | Msa0804850:CDS | 50.0% | |
| GGAAGACCTCAGTAAAGTGG+AGG | + | chr5_3:21123837-21123856 | Msa0804850:CDS | 50.0% | |
| AACAGACCAGGTAGGAGTCA+AGG | - | chr5_3:21123976-21123995 | None:intergenic | 50.0% | |
| GAGACAACAACAGACCAGGT+AGG | - | chr5_3:21123984-21124003 | None:intergenic | 50.0% | |
| ! | GATAGAGGCACACGACGAAT+AGG | - | chr5_3:21125405-21125424 | None:intergenic | 50.0% |
| GTAACTGCAGCACCAGATGA+AGG | + | chr5_3:21125765-21125784 | Msa0804850:CDS | 50.0% | |
| AACTGCAGCACCAGATGAAG+GGG | + | chr5_3:21125767-21125786 | Msa0804850:CDS | 50.0% | |
| CGGTGATGAGCTTCCAAAGA+AGG | + | chr5_3:21125880-21125899 | Msa0804850:CDS | 50.0% | |
| TAGAGCTCTTGAAAGCTCCC+AGG | - | chr5_3:21126932-21126951 | None:intergenic | 50.0% | |
| ATTGGAAGCAGTAGCCCCTT+GGG | + | chr5_3:21126983-21127002 | Msa0804850:intron | 50.0% | |
| !! | TCAAGGAAGGGTGTTTCCTC+TGG | - | chr5_3:21127020-21127039 | None:intergenic | 50.0% |
| GAGGAAACACCCTTCCTTGA+AGG | + | chr5_3:21127020-21127039 | Msa0804850:intron | 50.0% | |
| AGTGTGTGGTGAGTGGATAG+TGG | + | chr5_3:21127158-21127177 | Msa0804850:intron | 50.0% | |
| CACACATTGGTCCTTCATGC+GGG | - | chr5_3:21127691-21127710 | None:intergenic | 50.0% | |
| CTCTTGTGGTCTGATCCAGA+CGG | + | chr5_3:21127713-21127732 | Msa0804850:intron | 50.0% | |
| ATCCAGACGGTCGTTGTTGT+TGG | + | chr5_3:21127726-21127745 | Msa0804850:intron | 50.0% | |
| ! | TCCAGACGGTCGTTGTTGTT+GGG | + | chr5_3:21127727-21127746 | Msa0804850:intron | 50.0% |
| TAGAGCTCACCAGCTTGTGA+TGG | + | chr5_3:21127837-21127856 | Msa0804850:CDS | 50.0% | |
| AAGTGTTACGGTCAGTCACC+TGG | - | chr5_3:21127879-21127898 | None:intergenic | 50.0% | |
| TGGGAATATGGCTGCCATTC+TGG | + | chr5_3:21128011-21128030 | Msa0804850:three_prime_UTR | 50.0% | |
| AGGAGCAAGCGGCAATAACA+TGG | + | chr5_3:21128345-21128364 | Msa0804850:three_prime_UTR | 50.0% | |
| TGATCTCCTTGCACTCCCCA+AGG | - | chr5_3:21121281-21121300 | None:intergenic | 55.0% | |
| ! | TGATGGGTGGGATCAGGGAT+AGG | - | chr5_3:21121771-21121790 | None:intergenic | 55.0% |
| CACCATAGCAGCTTCTGGTC+CGG | + | chr5_3:21122156-21122175 | Msa0804850:intron | 55.0% | |
| AACCGGACCAGAAGCTGCTA+TGG | - | chr5_3:21122161-21122180 | None:intergenic | 55.0% | |
| ACCTTCCGTTTCAGTGGGTG+CGG | + | chr5_3:21122307-21122326 | Msa0804850:CDS | 55.0% | |
| ! | CAAGCTCCAGGGCAAGTTGA+TGG | + | chr5_3:21123246-21123265 | Msa0804850:intron | 55.0% |
| CTTGGTCCATCAACTTGCCC+TGG | - | chr5_3:21123255-21123274 | None:intergenic | 55.0% | |
| GGAGTCAAGGCCAATGACCT+TGG | - | chr5_3:21123963-21123982 | None:intergenic | 55.0% | |
| !! | CATTGGCCTTGACTCCTACC+TGG | + | chr5_3:21123967-21123986 | Msa0804850:intron | 55.0% |
| AAGGCACGATACTGCACACC+TGG | + | chr5_3:21126911-21126930 | Msa0804850:intron | 55.0% | |
| AGGCACGATACTGCACACCT+GGG | + | chr5_3:21126912-21126931 | Msa0804850:intron | 55.0% | |
| GATTGGAAGCAGTAGCCCCT+TGG | + | chr5_3:21126982-21127001 | Msa0804850:intron | 55.0% | |
| ! | CCAGACGGTCGTTGTTGTTG+GGG | + | chr5_3:21127728-21127747 | Msa0804850:intron | 55.0% |
| ! | GCTCACCAGCTTGTGATGGA+AGG | + | chr5_3:21127841-21127860 | Msa0804850:CDS | 55.0% |
| TCCTTGCACTCCCCAAGGTC+GGG | - | chr5_3:21121276-21121295 | None:intergenic | 60.0% | |
| CTCCTTGCACTCCCCAAGGT+CGG | - | chr5_3:21121277-21121296 | None:intergenic | 60.0% | |
| ACCGCACCCACTGAAACGGA+AGG | - | chr5_3:21122311-21122330 | None:intergenic | 60.0% | |
| CGCAACCGCACCCACTGAAA+CGG | - | chr5_3:21122315-21122334 | None:intergenic | 60.0% | |
| CGTTTCAGTGGGTGCGGTTG+CGG | + | chr5_3:21122313-21122332 | Msa0804850:CDS | 60.0% | |
| GTTTCAGTGGGTGCGGTTGC+GGG | + | chr5_3:21122314-21122333 | Msa0804850:CDS | 60.0% | |
| TTGGAGCTTGAGCGCAGTGG+TGG | + | chr5_3:21123594-21123613 | Msa0804850:CDS | 60.0% | |
| TGGAGCTTGAGCGCAGTGGT+GGG | + | chr5_3:21123595-21123614 | Msa0804850:CDS | 60.0% | |
| GAAGCAGTAGCCCCTTGGGA+AGG | + | chr5_3:21126987-21127006 | Msa0804850:intron | 60.0% | |
| CCCCAACAACAACGACCGTC+TGG | - | chr5_3:21127731-21127750 | None:intergenic | 60.0% | |
| ATCCCACCCAAGCCCGACCT+TGG | + | chr5_3:21121261-21121280 | Msa0804850:intron | 65.0% | |
| TCCCACCCAAGCCCGACCTT+GGG | + | chr5_3:21121262-21121281 | Msa0804850:intron | 65.0% | |
| CACTCCCCAAGGTCGGGCTT+GGG | - | chr5_3:21121270-21121289 | None:intergenic | 65.0% | |
| GCGTTGGAGCTTGAGCGCAG+TGG | + | chr5_3:21123591-21123610 | Msa0804850:CDS | 65.0% | |
| CCCCAAGGTCGGGCTTGGGT+GGG | - | chr5_3:21121266-21121285 | None:intergenic | 70.0% | |
| CCCACCCAAGCCCGACCTTG+GGG | + | chr5_3:21121263-21121282 | Msa0804850:intron | 70.0% | |
| TCCCCAAGGTCGGGCTTGGG+TGG | - | chr5_3:21121267-21121286 | None:intergenic | 70.0% | |
| GCACTCCCCAAGGTCGGGCT+TGG | - | chr5_3:21121271-21121290 | None:intergenic | 70.0% | |
| ! | GCCCGACCTTGGGGAGTGCA+AGG | + | chr5_3:21121272-21121291 | Msa0804850:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 21120455 | 21128435 | 21120455 | ID=Msa0804850;Name=Msa0804850 |
| chr5_3 | mRNA | 21120455 | 21128435 | 21120455 | ID=Msa0804850-mRNA-1;Parent=Msa0804850;Name=Msa0804850-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0.44|0.5|0.8|0.88|0.9|10|427|323 |
| chr5_3 | exon | 21120455 | 21120460 | 21120455 | ID=Msa0804850-mRNA-1:exon:8434;Parent=Msa0804850-mRNA-1 |
| chr5_3 | exon | 21122267 | 21122413 | 21122267 | ID=Msa0804850-mRNA-1:exon:8435;Parent=Msa0804850-mRNA-1 |
| chr5_3 | exon | 21123543 | 21123655 | 21123543 | ID=Msa0804850-mRNA-1:exon:8436;Parent=Msa0804850-mRNA-1 |
| chr5_3 | exon | 21123828 | 21123950 | 21123828 | ID=Msa0804850-mRNA-1:exon:8437;Parent=Msa0804850-mRNA-1 |
| chr5_3 | exon | 21124493 | 21124530 | 21124493 | ID=Msa0804850-mRNA-1:exon:8438;Parent=Msa0804850-mRNA-1 |
| chr5_3 | exon | 21124682 | 21124857 | 21124682 | ID=Msa0804850-mRNA-1:exon:8439;Parent=Msa0804850-mRNA-1 |
| chr5_3 | exon | 21125657 | 21125788 | 21125657 | ID=Msa0804850-mRNA-1:exon:8440;Parent=Msa0804850-mRNA-1 |
| chr5_3 | exon | 21125875 | 21125918 | 21125875 | ID=Msa0804850-mRNA-1:exon:8441;Parent=Msa0804850-mRNA-1 |
| chr5_3 | exon | 21127732 | 21127879 | 21127732 | ID=Msa0804850-mRNA-1:exon:8442;Parent=Msa0804850-mRNA-1 |
| chr5_3 | exon | 21127964 | 21128435 | 21127964 | ID=Msa0804850-mRNA-1:exon:8443;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21120455 | 21120460 | 21120455 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21122267 | 21122413 | 21122267 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21123543 | 21123655 | 21123543 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21123828 | 21123950 | 21123828 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21124493 | 21124530 | 21124493 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21124682 | 21124857 | 21124682 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21125657 | 21125788 | 21125657 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21125875 | 21125918 | 21125875 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21127732 | 21127879 | 21127732 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | CDS | 21127964 | 21128008 | 21127964 | ID=Msa0804850-mRNA-1:cds;Parent=Msa0804850-mRNA-1 |
| chr5_3 | three_prime_UTR | 21128009 | 21128435 | 21128009 | ID=Msa0804850-mRNA-1:three_prime_utr;Parent=Msa0804850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
