AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0362450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0362450 MtrunA17_Chr3g0101481 94.463 1481 81 1 1 1480 22 1502 0.0 2882
Msa0362450 MtrunA17_Chr5g0445741 74.129 1492 354 8 3 1477 19 1495 0.0 2219
Msa0362450 MtrunA17_Chr5g0412721 72.819 1490 380 11 4 1477 10 1490 0.0 2193
Msa0362450 MtrunA17_Chr3g0101441 67.229 1303 414 4 186 1477 6 1306 0.0 1794
Msa0362450 MtrunA17_Chr5g0445671 78.876 1103 221 3 364 1465 1 1092 0.0 1786
Msa0362450 MtrunA17_Chr3g0101461 66.462 1303 424 4 186 1477 6 1306 0.0 1779
Msa0362450 MtrunA17_Chr3g0101471 65.517 1305 429 6 187 1477 7 1304 0.0 1773
Msa0362450 MtrunA17_Chr1g0183191 54.786 1285 561 4 205 1474 246 1525 0.0 1446
Msa0362450 MtrunA17_Chr7g0262191 54.270 1288 565 6 205 1474 244 1525 0.0 1424
Msa0362450 MtrunA17_Chr8g0337191 52.498 1301 597 7 186 1475 191 1481 0.0 1382
Msa0362450 MtrunA17_Chr8g0337121 52.264 1303 597 8 186 1475 211 1501 0.0 1380
Msa0362450 MtrunA17_Chr5g0412921 66.070 1005 309 11 4 993 10 997 0.0 1283
Msa0362450 MtrunA17_Chr5g0412921 22.780 259 184 4 1199 1456 579 822 2.06e-11 68.9
Msa0362450 MtrunA17_Chr8g0376961 44.740 1464 733 19 38 1476 29 1441 0.0 1265
Msa0362450 MtrunA17_Chr3g0085281 43.784 1464 741 24 53 1476 43 1464 0.0 1199
Msa0362450 MtrunA17_Chr8g0341751 44.427 1310 699 14 172 1475 1 1287 0.0 1116
Msa0362450 MtrunA17_Chr8g0341761 43.192 1322 707 12 168 1478 163 1451 0.0 1098
Msa0362450 MtrunA17_Chr6g0463131 42.857 1330 714 12 159 1476 177 1472 0.0 1098
Msa0362450 MtrunA17_Chr8g0353781 44.267 1317 697 13 168 1475 166 1454 0.0 1095
Msa0362450 MtrunA17_Chr1g0195691 43.280 1317 728 7 160 1473 212 1512 0.0 1078
Msa0362450 MtrunA17_Chr2g0295911 40.112 1431 818 15 50 1473 102 1500 0.0 1077
Msa0362450 MtrunA17_Chr6g0463121 42.685 1326 721 12 159 1476 177 1471 0.0 1076
Msa0362450 MtrunA17_Chr6g0463151 43.032 1306 706 11 177 1476 16 1289 0.0 1076
Msa0362450 MtrunA17_Chr6g0463181 43.150 1270 675 10 205 1469 221 1448 0.0 1070
Msa0362450 MtrunA17_Chr6g0463141 40.963 1350 731 11 161 1475 177 1495 0.0 1066
Msa0362450 MtrunA17_Chr6g0463201 41.589 1397 759 20 88 1469 115 1469 0.0 1064
Msa0362450 MtrunA17_Chr2g0295901 40.112 1426 806 17 58 1473 110 1497 0.0 1062
Msa0362450 MtrunA17_Chr8g0363771 40.084 1422 819 12 57 1473 104 1497 0.0 1058
Msa0362450 MtrunA17_Chr6g0471281 42.934 1295 708 9 185 1476 206 1472 0.0 1058
Msa0362450 MtrunA17_Chr6g0472531 41.799 1323 734 9 159 1476 131 1422 0.0 1056
Msa0362450 MtrunA17_Chr2g0295921 40.196 1428 821 14 50 1473 114 1512 0.0 1049
Msa0362450 MtrunA17_Chr8g0341851 41.613 1389 764 20 107 1475 103 1464 0.0 1035
Msa0362450 MtrunA17_Chr6g0463211 41.304 1334 697 14 184 1469 240 1535 0.0 1031
Msa0362450 MtrunA17_Chr8g0341811 42.429 1268 668 9 206 1469 58 1267 0.0 1026
Msa0362450 MtrunA17_Chr8g0353541 46.465 1089 564 9 396 1480 1 1074 0.0 987
Msa0362450 MtrunA17_Chr3g0080981 34.357 1368 819 22 140 1477 159 1477 0.0 756
Msa0362450 MtrunA17_Chr3g0080941 34.187 1366 838 20 128 1477 158 1478 0.0 751
Msa0362450 MtrunA17_Chr2g0285731 35.112 1293 785 17 203 1477 224 1480 0.0 729
Msa0362450 MtrunA17_Chr1g0202221 41.499 747 415 8 161 905 181 907 0.0 588
Msa0362450 MtrunA17_Chr1g0202221 47.705 501 233 2 976 1476 907 1378 3.49e-144 477
Msa0362450 MtrunA17_Chr1g0202221 23.843 281 192 6 1199 1476 589 850 6.34e-13 74.3
Msa0362450 MtrunA17_Chr6g0484351 44.883 684 350 7 798 1480 1 658 0.0 573
Msa0362450 MtrunA17_Chr6g0484351 23.571 280 194 6 564 826 371 647 4.50e-12 70.9
Msa0362450 MtrunA17_Chr8g0359291 44.345 672 348 5 798 1469 1 646 0.0 566
Msa0362450 MtrunA17_Chr8g0359291 23.095 420 271 11 433 813 226 632 9.85e-11 66.6
Msa0362450 MtrunA17_Chr6g0463391 43.769 674 352 6 798 1469 1 649 0.0 562
Msa0362450 MtrunA17_Chr5g0412941 81.288 326 60 1 1153 1477 4 329 0.0 550
Msa0362450 MtrunA17_Chr2g0333911 33.462 1037 633 13 456 1466 1 1006 9.00e-176 552
Msa0362450 MtrunA17_Chr6g0484361 41.680 643 367 7 161 797 160 800 1.70e-156 495
Msa0362450 MtrunA17_Chr6g0463401 39.095 619 358 6 159 766 182 792 2.40e-145 465
Msa0362450 MtrunA17_Chr8g0341801 50.459 436 212 4 1047 1480 1 434 5.63e-137 429
Msa0362450 MtrunA17_Chr8g0341801 24.014 279 194 5 564 826 146 422 6.62e-12 69.7
Msa0362450 MtrunA17_Chr5g0445701 81.707 246 39 1 1238 1477 1 246 1.60e-135 417
Msa0362450 MtrunA17_Chr5g0445691 54.054 370 150 5 4 355 20 387 1.50e-122 388
Msa0362450 MtrunA17_Chr5g0412931 77.528 178 40 0 991 1168 1 178 1.85e-90 290
Msa0362450 MtrunA17_Chr8g0341791 42.373 354 193 2 661 1014 10 352 3.58e-88 291
Msa0362450 MtrunA17_Chr8g0341781 34.447 479 309 1 179 657 17 490 9.45e-87 292
Msa0362450 MtrunA17_Chr8g0349441 49.770 217 105 1 559 775 2 214 2.07e-64 218
Msa0362450 MtrunA17_Chr7g0233901 23.388 1039 653 35 511 1473 270 1241 1.26e-56 216
Msa0362450 MtrunA17_Chr8g0371961 72.000 125 17 1 1238 1362 7 113 1.44e-53 182
Msa0362450 MtrunA17_Chr7g0264631 23.978 930 585 24 602 1457 426 1307 7.27e-53 204
Msa0362450 MtrunA17_Chr7g0264631 29.167 264 168 8 1231 1479 424 683 1.52e-27 122
Msa0362450 MtrunA17_Chr7g0264631 29.008 262 162 6 573 818 1057 1310 3.08e-24 111
Msa0362450 MtrunA17_Chr2g0285301 24.868 945 593 31 602 1473 364 1264 5.85e-51 197
Msa0362450 MtrunA17_Chr2g0285301 29.134 254 171 4 1231 1476 362 614 3.43e-33 140
Msa0362450 MtrunA17_Chr6g0453051 22.750 1011 674 27 513 1466 283 1243 1.98e-49 192
Msa0362450 MtrunA17_Chr6g0453051 24.400 250 184 4 1231 1477 361 608 1.84e-24 112
Msa0362450 MtrunA17_Chr2g0285191 23.681 929 622 25 602 1473 398 1296 1.95e-42 170
Msa0362450 MtrunA17_Chr2g0285191 30.159 252 166 4 1225 1466 382 633 2.04e-33 141
Msa0362450 MtrunA17_Chr2g0285311 24.412 553 372 16 936 1466 76 604 9.43e-35 145
Msa0362450 MtrunA17_Chr2g0285311 24.510 510 343 15 985 1473 780 1268 2.23e-28 124
Msa0362450 MtrunA17_Chr2g0285311 31.416 226 138 6 602 812 369 592 5.62e-20 97.4
Msa0362450 MtrunA17_Chr2g0285311 29.388 245 154 5 602 829 1025 1267 1.84e-19 95.5
Msa0362450 MtrunA17_Chr6g0481921 30.962 239 161 3 1231 1466 269 506 2.74e-34 144
Msa0362450 MtrunA17_Chr6g0481921 26.493 268 192 3 1210 1473 904 1170 2.06e-29 127
Msa0362450 MtrunA17_Chr6g0481921 30.738 244 152 4 602 829 927 1169 2.32e-21 101
Msa0362450 MtrunA17_Chr6g0481921 31.858 226 137 6 602 812 271 494 1.46e-20 99.0
Msa0362450 MtrunA17_Chr1g0194031 24.627 536 352 19 958 1466 109 619 5.64e-34 142
Msa0362450 MtrunA17_Chr1g0194031 24.458 507 321 15 346 814 127 609 2.02e-24 111
Msa0362450 MtrunA17_Chr3g0119381 23.719 527 371 14 958 1467 123 635 4.86e-33 139
Msa0362450 MtrunA17_Chr3g0119381 28.750 240 165 4 1231 1466 1055 1292 1.54e-25 115
Msa0362450 MtrunA17_Chr3g0119381 28.906 256 159 4 594 827 1042 1296 6.50e-22 103
Msa0362450 MtrunA17_Chr3g0119381 32.895 228 132 7 602 812 399 622 1.29e-21 102
Msa0362450 MtrunA17_Chr4g0069361 22.575 536 363 10 958 1466 103 613 1.20e-32 138
Msa0362450 MtrunA17_Chr4g0069361 32.558 258 151 5 594 829 1021 1277 5.50e-27 120
Msa0362450 MtrunA17_Chr4g0069361 28.916 249 171 4 1231 1475 1034 1280 2.62e-26 117
Msa0362450 MtrunA17_Chr4g0069361 24.294 531 321 20 328 812 106 601 1.68e-20 99.0
Msa0362450 MtrunA17_Chr1g0193991 24.220 545 343 19 958 1466 114 624 2.60e-32 137
Msa0362450 MtrunA17_Chr1g0193991 28.862 246 168 4 1231 1471 1042 1285 6.98e-26 116
Msa0362450 MtrunA17_Chr1g0193991 24.852 507 319 17 346 814 132 614 3.28e-24 111
Msa0362450 MtrunA17_Chr1g0193991 32.258 217 130 4 614 814 1055 1270 2.62e-21 101
Msa0362450 MtrunA17_Chr3g0138211 28.514 249 174 3 1231 1476 394 641 3.91e-32 137
Msa0362450 MtrunA17_Chr3g0138211 30.660 212 142 3 1265 1473 1071 1280 2.63e-24 111
Msa0362450 MtrunA17_Chr3g0138211 33.971 209 122 3 633 826 1069 1276 9.99e-22 102
Msa0362450 MtrunA17_Chr3g0138211 30.515 272 164 9 614 866 407 672 7.19e-21 100
Msa0362450 MtrunA17_Chr3g0123411 31.602 231 154 3 1231 1458 903 1132 7.49e-32 135
Msa0362450 MtrunA17_Chr3g0123411 28.274 336 198 9 507 818 818 1134 2.30e-25 114
Msa0362450 MtrunA17_Chr3g0123411 28.253 269 187 4 1191 1456 209 474 3.14e-21 101
Msa0362450 MtrunA17_Chr3g0123411 35.526 152 90 4 670 816 330 478 7.49e-17 87.0
Msa0362450 MtrunA17_Chr1g0156821 30.196 255 172 4 1218 1467 977 1230 2.45e-31 134
Msa0362450 MtrunA17_Chr1g0156821 28.936 235 151 5 609 828 1001 1234 1.54e-22 105
Msa0362450 MtrunA17_Chr1g0156821 26.295 251 180 2 1231 1478 371 619 6.43e-20 97.1
Msa0362450 MtrunA17_Chr1g0156821 30.128 156 103 3 670 822 453 605 3.15e-14 78.6
Msa0362450 MtrunA17_Chr4g0069351 28.870 239 166 3 1231 1466 376 613 2.56e-31 134
Msa0362450 MtrunA17_Chr4g0069351 27.119 295 200 6 1187 1475 995 1280 2.54e-27 121
Msa0362450 MtrunA17_Chr4g0069351 34.081 223 131 3 619 826 1053 1274 7.01e-26 116
Msa0362450 MtrunA17_Chr4g0069351 33.772 228 134 6 602 814 378 603 8.47e-22 103
Msa0362450 MtrunA17_Chr4g0069401 22.562 523 379 13 958 1466 98 608 5.22e-31 133
Msa0362450 MtrunA17_Chr4g0069401 32.558 258 151 4 594 829 1019 1275 1.33e-27 122
Msa0362450 MtrunA17_Chr4g0069401 28.400 250 171 5 1231 1475 1032 1278 3.78e-25 114
Msa0362450 MtrunA17_Chr4g0069401 33.186 226 134 6 602 812 373 596 9.87e-21 99.8
Msa0362450 MtrunA17_Chr5g0410921 29.583 240 165 3 1231 1467 987 1225 6.21e-31 132
Msa0362450 MtrunA17_Chr5g0410921 23.982 663 403 24 212 815 595 1215 1.14e-25 115
Msa0362450 MtrunA17_Chr5g0410921 29.524 210 143 2 1260 1466 384 591 1.71e-25 115
Msa0362450 MtrunA17_Chr5g0410921 32.258 279 160 8 560 817 314 584 3.96e-23 107
Msa0362450 MtrunA17_Chr4g0061601 23.923 627 412 20 869 1456 13 613 6.93e-31 130
Msa0362450 MtrunA17_Chr4g0061601 27.128 376 243 8 471 824 257 623 2.52e-29 125
Msa0362450 MtrunA17_Chr5g0433051 32.627 236 156 3 1231 1465 464 697 7.80e-31 131
Msa0362450 MtrunA17_Chr5g0433051 31.064 235 141 5 619 836 481 711 1.84e-19 94.7
Msa0362450 MtrunA17_Chr6g0452111 30.072 276 178 7 1187 1455 977 1244 1.12e-30 132
Msa0362450 MtrunA17_Chr6g0452111 29.719 249 171 3 1231 1476 366 613 7.69e-30 129
Msa0362450 MtrunA17_Chr6g0452111 27.829 327 201 7 511 815 281 594 2.41e-25 114
Msa0362450 MtrunA17_Chr6g0452111 26.988 415 259 12 437 816 842 1247 1.86e-23 108
Msa0362450 MtrunA17_Chr6g0452071 30.000 230 155 4 1231 1455 211 439 1.44e-30 127
Msa0362450 MtrunA17_Chr6g0452071 28.879 232 146 5 602 816 213 442 5.46e-22 101
Msa0362450 MtrunA17_Chr6g0452041 30.120 249 170 3 1231 1476 359 606 2.03e-30 131
Msa0362450 MtrunA17_Chr6g0452041 29.514 288 189 8 1187 1467 978 1258 5.86e-30 129
Msa0362450 MtrunA17_Chr6g0452041 26.911 327 204 7 511 815 274 587 5.19e-24 110
Msa0362450 MtrunA17_Chr6g0452041 25.708 424 253 13 437 816 843 1248 3.93e-23 107
Msa0362450 MtrunA17_Chr6g0452141 31.718 227 149 4 1235 1455 1017 1243 3.15e-30 130
Msa0362450 MtrunA17_Chr6g0452141 28.571 252 176 3 1231 1479 360 610 6.91e-28 123
Msa0362450 MtrunA17_Chr6g0452141 28.247 308 191 6 527 812 286 585 1.13e-24 112
Msa0362450 MtrunA17_Chr6g0452141 24.113 423 261 13 437 816 841 1246 8.96e-22 103
Msa0362450 MtrunA17_Chr4g0069411 28.682 258 162 5 1231 1476 394 641 4.19e-30 130
Msa0362450 MtrunA17_Chr4g0069411 28.400 250 173 4 1231 1476 1048 1295 6.43e-28 123
Msa0362450 MtrunA17_Chr4g0069411 35.268 224 127 4 619 826 1067 1288 4.78e-26 117
Msa0362450 MtrunA17_Chr4g0069411 29.452 292 171 11 537 812 347 619 1.64e-20 99.0
Msa0362450 MtrunA17_Chr1g0178481 30.798 263 166 5 1200 1454 350 604 6.08e-30 127
Msa0362450 MtrunA17_Chr1g0178481 26.852 324 200 10 522 816 300 615 4.08e-21 99.8
Msa0362450 MtrunA17_Chr6g0451881 28.674 279 193 4 1199 1474 329 604 1.08e-29 129
Msa0362450 MtrunA17_Chr6g0451881 30.041 243 163 5 1231 1467 1005 1246 1.96e-29 128
Msa0362450 MtrunA17_Chr6g0451881 27.523 327 202 7 511 815 274 587 1.43e-25 115
Msa0362450 MtrunA17_Chr6g0451881 29.386 228 142 5 606 816 1011 1236 1.08e-21 102
Msa0362450 MtrunA17_Chr6g0452171 30.041 243 163 5 1231 1467 1018 1259 1.19e-29 129
Msa0362450 MtrunA17_Chr6g0452171 30.120 249 170 3 1231 1476 359 606 2.04e-29 128
Msa0362450 MtrunA17_Chr6g0452171 27.829 327 201 7 511 815 274 587 4.67e-25 114
Msa0362450 MtrunA17_Chr6g0452171 29.482 251 153 6 583 816 1006 1249 1.22e-22 105
Msa0362450 MtrunA17_Chr6g0451911 29.694 229 156 3 1231 1455 1013 1240 1.92e-29 128
Msa0362450 MtrunA17_Chr6g0451911 28.916 249 173 3 1231 1476 359 606 1.14e-28 125
Msa0362450 MtrunA17_Chr6g0451911 26.450 431 260 16 429 816 827 1243 2.03e-25 115
Msa0362450 MtrunA17_Chr6g0451911 26.606 327 205 7 511 815 274 587 6.61e-25 113
Msa0362450 MtrunA17_Chr6g0474071 27.815 453 261 14 1061 1458 1 442 1.95e-29 123
Msa0362450 MtrunA17_Chr6g0474071 29.614 233 147 4 609 825 220 451 6.73e-20 94.7
Msa0362450 MtrunA17_Chr4g0039821 22.610 544 353 14 958 1466 101 611 3.21e-29 127
Msa0362450 MtrunA17_Chr4g0039821 27.711 332 211 8 1151 1475 969 1278 2.97e-28 124
Msa0362450 MtrunA17_Chr4g0039821 34.513 226 132 3 619 829 1051 1275 1.31e-25 115
Msa0362450 MtrunA17_Chr4g0039821 25.800 531 313 20 328 812 104 599 8.62e-21 99.8
Msa0362450 MtrunA17_Chr1g0180601 28.400 250 169 4 1211 1457 1039 1281 4.58e-29 127
Msa0362450 MtrunA17_Chr1g0180601 28.736 261 173 6 1231 1479 397 656 6.31e-28 123
Msa0362450 MtrunA17_Chr1g0180601 29.870 231 147 3 602 818 399 628 1.36e-23 108
Msa0362450 MtrunA17_Chr1g0180601 30.901 233 142 4 602 818 1055 1284 1.48e-23 108
Msa0362450 MtrunA17_Chr4g0041871 31.140 228 153 3 1231 1455 1004 1230 1.72e-28 125
Msa0362450 MtrunA17_Chr4g0041871 29.492 295 191 6 1169 1456 284 568 2.62e-26 117
Msa0362450 MtrunA17_Chr4g0041871 30.901 233 142 4 602 818 1006 1235 2.01e-22 105
Msa0362450 MtrunA17_Chr4g0041871 27.809 356 205 11 491 813 231 567 6.06e-22 103
Msa0362450 MtrunA17_Chr3g0128381 25.259 483 318 14 1009 1465 167 632 4.61e-28 122
Msa0362450 MtrunA17_Chr3g0128381 31.061 264 153 6 572 813 366 622 1.00e-20 98.6
Msa0362450 MtrunA17_Chr6g0452061 30.415 217 146 3 1244 1455 539 755 7.03e-28 122
Msa0362450 MtrunA17_Chr6g0452061 25.694 432 243 14 437 816 353 758 3.40e-23 107
Msa0362450 MtrunA17_Chr6g0452061 32.203 118 79 1 1363 1479 14 131 6.78e-13 73.6
Msa0362450 MtrunA17_Chr6g0452061 37.234 94 58 1 720 813 14 106 3.11e-12 71.6
Msa0362450 MtrunA17_Chr1g0194001 31.081 222 146 4 1231 1447 145 364 1.95e-27 116
Msa0362450 MtrunA17_Chr1g0194001 33.641 217 127 4 614 814 158 373 2.61e-23 103
Msa0362450 MtrunA17_Chr5g0433071 32.627 236 156 3 1231 1465 466 699 1.34e-26 117
Msa0362450 MtrunA17_Chr5g0433071 31.169 231 142 4 619 834 483 711 2.42e-18 91.3
Msa0362450 MtrunA17_Chr8g0344651 28.959 221 146 4 1244 1457 1252 1468 3.99e-25 114
Msa0362450 MtrunA17_Chr8g0344651 22.244 499 360 14 980 1463 345 830 3.39e-23 107
Msa0362450 MtrunA17_Chr8g0344651 27.642 246 159 4 602 831 598 840 3.44e-21 101
Msa0362450 MtrunA17_Chr8g0344651 30.147 272 169 5 560 815 1202 1468 1.59e-20 99.0
Msa0362450 MtrunA17_Chr6g0452081 30.583 206 139 3 1231 1435 25 227 5.37e-25 105
Msa0362450 MtrunA17_Chr6g0452081 33.889 180 100 4 630 793 51 227 1.27e-18 86.7
Msa0362450 MtrunA17_Chr6g0486841 23.425 508 345 17 987 1468 749 1238 2.30e-24 111
Msa0362450 MtrunA17_Chr6g0486841 26.879 439 266 14 426 822 810 1235 6.02e-23 107
Msa0362450 MtrunA17_Chr6g0486841 31.518 257 156 5 573 815 335 585 3.42e-22 104
Msa0362450 MtrunA17_Chr6g0486841 21.573 496 357 13 988 1466 114 594 1.52e-21 102
Msa0362450 MtrunA17_Chr5g0412741 23.563 522 366 13 951 1455 178 683 1.42e-23 108
Msa0362450 MtrunA17_Chr5g0412741 25.385 390 244 10 455 813 310 683 1.17e-19 95.5
Msa0362450 MtrunA17_Chr8g0366481 27.917 240 169 3 1231 1467 384 622 4.02e-23 106
Msa0362450 MtrunA17_Chr8g0366481 34.632 231 130 6 602 815 386 612 4.22e-19 93.6
Msa0362450 MtrunA17_Chr7g0227391 30.924 249 149 6 602 831 425 669 1.15e-22 105
Msa0362450 MtrunA17_Chr7g0227391 28.879 232 155 5 1231 1455 423 651 6.28e-22 102
Msa0362450 MtrunA17_Chr7g0222781 30.000 250 170 4 1210 1455 1132 1380 7.56e-22 103
Msa0362450 MtrunA17_Chr7g0222781 26.872 227 163 2 1231 1455 404 629 1.33e-20 99.4
Msa0362450 MtrunA17_Chr7g0222781 28.464 267 160 7 588 826 1130 1393 2.10e-17 89.0
Msa0362450 MtrunA17_Chr7g0222781 27.778 270 169 7 575 823 375 639 1.15e-14 79.7
Msa0362450 MtrunA17_Chr8g0393151 30.568 229 144 5 1233 1454 19 239 3.93e-21 94.7
Msa0362450 MtrunA17_Chr8g0393151 31.280 211 122 7 619 812 35 239 2.51e-15 77.8
Msa0362450 MtrunA17_Chr1g0212701 25.991 227 165 2 1231 1455 398 623 1.25e-20 99.4
Msa0362450 MtrunA17_Chr1g0212701 30.631 222 149 4 1230 1447 1144 1364 2.15e-20 98.6
Msa0362450 MtrunA17_Chr1g0212701 30.041 243 150 6 601 826 1146 1385 2.47e-17 88.6
Msa0362450 MtrunA17_Chr1g0212701 29.237 236 151 5 602 823 400 633 1.64e-14 79.3
Msa0362450 MtrunA17_Chr2g0333921 25.781 256 179 5 187 439 212 459 1.23e-17 87.8
Msa0362450 MtrunA17_Chr8g0353561 32.418 182 113 3 172 353 1 172 1.73e-17 82.8
Msa0362450 MtrunA17_Chr8g0366471 37.500 96 59 1 720 815 19 113 2.04e-16 77.8
Msa0362450 MtrunA17_Chr8g0366471 29.808 104 73 0 1363 1466 19 122 2.79e-12 65.9
Msa0362450 MtrunA17_Chr3g0128391 38.542 96 58 1 720 815 447 541 3.95e-15 80.5
Msa0362450 MtrunA17_Chr3g0128391 34.343 99 65 0 1359 1457 443 541 2.35e-12 71.6
Msa0362450 MtrunA17_Chr3g0128391 34.211 114 73 2 1231 1342 254 367 2.54e-12 71.6
Msa0362450 MtrunA17_Chr4g0014991 34.951 103 66 1 465 566 17 119 1.59e-13 70.1
Msa0362450 MtrunA17_Chr3g0130211 30.508 236 138 7 587 807 19 243 4.60e-13 71.2
Msa0362450 MtrunA17_Chr2g0316301 27.570 214 133 7 619 812 73 284 3.79e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0362450 AT3G13080.1 66.174 1487 485 7 3 1477 33 1513 0.0 1990
Msa0362450 AT3G13080.5 65.957 1457 478 7 3 1447 33 1483 0.0 1940
Msa0362450 AT3G13080.2 64.560 1487 484 8 3 1477 33 1488 0.0 1927
Msa0362450 AT3G13100.1 61.107 1481 545 8 11 1478 24 1486 0.0 1801
Msa0362450 AT3G13090.1 61.554 1454 530 10 26 1475 33 1461 0.0 1800
Msa0362450 AT3G13100.2 65.473 1257 418 4 222 1478 1 1241 0.0 1680
Msa0362450 AT1G04120.1 51.136 1408 648 14 92 1474 117 1509 0.0 1427
Msa0362450 AT1G04120.2 50.923 1408 646 15 92 1474 117 1504 0.0 1415
Msa0362450 AT3G60160.3 49.123 1482 700 18 18 1474 8 1460 0.0 1380
Msa0362450 AT3G60160.1 49.123 1482 700 18 18 1474 44 1496 0.0 1380
Msa0362450 AT1G04120.3 50.071 1408 628 15 92 1474 117 1474 0.0 1376
Msa0362450 AT3G13080.3 61.724 1079 395 7 3 1069 33 1105 0.0 1318
Msa0362450 AT3G13080.4 61.724 1079 395 7 3 1069 33 1105 0.0 1318
Msa0362450 AT3G60970.1 54.144 1086 455 4 389 1474 1 1043 0.0 1219
Msa0362450 AT3G60160.2 47.517 1349 654 18 18 1341 44 1363 0.0 1199
Msa0362450 AT3G62700.1 44.052 1303 686 9 203 1473 245 1536 0.0 1098
Msa0362450 AT2G47800.1 44.784 1275 692 4 203 1473 247 1513 0.0 1089
Msa0362450 AT3G59140.1 43.021 1311 696 10 181 1476 176 1450 0.0 1077
Msa0362450 AT3G21250.2 43.405 1304 693 10 187 1476 187 1459 0.0 1054
Msa0362450 AT3G21250.4 43.405 1304 693 10 187 1476 193 1465 0.0 1053
Msa0362450 AT3G21250.5 42.868 1304 689 11 187 1476 193 1454 0.0 1034
Msa0362450 AT3G21250.1 42.868 1304 689 11 187 1476 187 1448 0.0 1034
Msa0362450 AT3G21250.6 46.259 1029 517 7 460 1476 39 1043 0.0 912
Msa0362450 AT3G21250.3 46.259 1029 517 7 460 1476 39 1043 0.0 912
Msa0362450 AT2G34660.1 34.681 1286 802 13 205 1477 225 1485 0.0 771
Msa0362450 AT2G34660.2 34.681 1286 802 13 205 1477 225 1485 0.0 771
Msa0362450 AT1G30400.2 34.766 1303 792 15 197 1478 217 1482 0.0 751
Msa0362450 AT1G30400.1 34.766 1303 792 15 197 1478 217 1482 0.0 751
Msa0362450 AT2G34660.3 35.264 1191 744 10 297 1477 25 1198 0.0 743
Msa0362450 AT1G30410.2 34.648 1293 798 16 188 1466 209 1468 0.0 742
Msa0362450 AT1G30410.6 34.648 1293 798 16 188 1466 209 1468 0.0 742
Msa0362450 AT1G30410.4 34.648 1293 798 16 188 1466 209 1468 0.0 742
Msa0362450 AT1G30410.5 34.648 1293 798 16 188 1466 94 1353 0.0 741
Msa0362450 AT1G30420.1 34.156 1297 799 16 188 1466 209 1468 0.0 741
Msa0362450 AT1G30410.1 34.568 1296 798 17 188 1466 209 1471 0.0 737
Msa0362450 AT2G07680.3 32.535 1294 813 13 187 1466 175 1422 0.0 672
Msa0362450 AT2G07680.6 32.535 1294 813 13 187 1466 76 1323 0.0 671
Msa0362450 AT2G07680.5 32.071 1294 800 12 187 1466 178 1406 0.0 662
Msa0362450 AT2G07680.1 32.071 1294 794 13 187 1466 178 1400 0.0 659
Msa0362450 AT2G07680.4 32.071 1294 794 13 187 1466 175 1397 0.0 658
Msa0362450 AT1G30410.3 32.857 1190 752 16 188 1363 209 1365 0.0 640
Msa0362450 AT1G30410.3 23.077 260 169 5 1191 1447 588 819 3.67e-12 72.0
Msa0362450 AT1G71330.1 68.269 312 97 2 691 1002 1 310 2.88e-143 441
Msa0362450 AT2G07680.2 29.691 1034 670 11 187 1206 175 1165 3.84e-135 448
Msa0362450 AT2G07680.2 24.074 216 148 3 1260 1473 611 812 9.95e-12 70.5
Msa0362450 AT1G30420.2 31.027 896 571 14 188 1069 209 1071 2.76e-129 429
Msa0362450 AT1G30420.2 23.372 261 167 6 1191 1447 588 819 2.46e-13 75.9
Msa0362450 AT2G47000.6 23.855 939 613 28 602 1474 384 1286 5.49e-54 208
Msa0362450 AT2G47000.6 24.764 529 360 15 958 1466 109 619 8.36e-34 142
Msa0362450 AT2G47000.5 23.855 939 613 28 602 1474 384 1286 5.49e-54 208
Msa0362450 AT2G47000.5 24.764 529 360 15 958 1466 109 619 8.36e-34 142
Msa0362450 AT2G47000.1 23.855 939 613 28 602 1474 384 1286 5.49e-54 208
Msa0362450 AT2G47000.1 24.764 529 360 15 958 1466 109 619 8.36e-34 142
Msa0362450 AT1G02520.1 22.694 943 614 23 602 1474 381 1278 3.91e-53 205
Msa0362450 AT1G02520.1 28.033 239 168 3 1231 1466 379 616 1.67e-30 132
Msa0362450 AT1G02520.2 22.694 943 614 23 602 1474 381 1278 3.91e-53 205
Msa0362450 AT1G02520.2 28.033 239 168 3 1231 1466 379 616 1.67e-30 132
Msa0362450 AT1G02520.3 22.694 943 614 23 602 1474 381 1278 3.91e-53 205
Msa0362450 AT1G02520.3 28.033 239 168 3 1231 1466 379 616 1.67e-30 132
Msa0362450 AT3G28415.2 24.920 935 574 35 608 1472 352 1228 3.19e-52 202
Msa0362450 AT3G28415.2 23.107 515 342 14 980 1466 93 581 5.08e-28 124
Msa0362450 AT3G28415.2 25.659 417 262 13 437 816 808 1213 5.68e-25 114
Msa0362450 AT3G28415.1 24.920 935 574 35 608 1472 344 1220 4.16e-52 202
Msa0362450 AT3G28415.1 23.208 530 352 15 966 1466 70 573 1.87e-28 125
Msa0362450 AT3G28415.1 25.659 417 262 13 437 816 800 1205 7.17e-25 113
Msa0362450 AT3G28390.1 24.011 1062 665 38 469 1455 212 1206 1.29e-50 197
Msa0362450 AT3G28390.1 28.870 239 166 3 1231 1466 345 582 4.45e-26 117
Msa0362450 AT3G28390.1 28.302 265 165 5 574 816 948 1209 1.91e-24 112
Msa0362450 AT3G28860.1 23.687 1047 632 31 513 1472 285 1251 6.70e-50 194
Msa0362450 AT3G28360.1 23.664 917 573 29 619 1467 363 1220 1.04e-48 191
Msa0362450 AT3G28360.1 31.004 229 154 3 1231 1456 344 571 2.12e-28 125
Msa0362450 AT3G28360.1 23.981 417 269 12 437 816 805 1210 6.99e-24 110
Msa0362450 AT3G28345.1 24.393 906 591 29 618 1471 375 1238 7.56e-48 188
Msa0362450 AT3G28345.1 29.213 267 185 3 1202 1466 330 594 1.67e-28 125
Msa0362450 AT3G28345.1 24.948 477 297 15 380 816 769 1224 2.49e-23 108
Msa0362450 AT3G28380.1 24.074 918 559 26 613 1456 369 1222 2.52e-46 183
Msa0362450 AT3G28380.1 28.014 282 196 4 1191 1467 316 595 7.15e-26 117
Msa0362450 AT3G28380.1 25.056 443 281 14 426 827 805 1237 1.28e-25 116
Msa0362450 AT2G47000.2 23.418 790 507 26 602 1328 384 1138 3.39e-36 150
Msa0362450 AT2G47000.2 24.764 529 360 15 958 1466 109 619 5.46e-34 143
Msa0362450 AT2G47000.3 24.764 529 360 15 958 1466 109 619 3.46e-34 143
Msa0362450 AT2G47000.3 32.895 228 136 6 602 814 384 609 3.64e-24 111
Msa0362450 AT2G47000.7 24.764 529 360 15 958 1466 109 619 3.46e-34 143
Msa0362450 AT2G47000.7 32.895 228 136 6 602 814 384 609 3.64e-24 111
Msa0362450 AT2G47000.4 24.764 529 360 15 958 1466 109 619 3.74e-34 143
Msa0362450 AT2G47000.4 32.895 228 136 6 602 814 384 609 3.28e-24 111
Msa0362450 AT4G18050.2 29.707 239 164 3 1231 1466 363 600 1.90e-33 141
Msa0362450 AT4G18050.2 29.461 241 165 3 1231 1467 1001 1240 1.14e-28 125
Msa0362450 AT4G18050.2 29.008 262 165 5 602 849 365 619 5.33e-22 104
Msa0362450 AT4G18050.2 29.412 272 158 8 588 829 978 1245 1.59e-20 99.4
Msa0362450 AT4G18050.1 29.707 239 164 3 1231 1466 353 590 2.07e-33 141
Msa0362450 AT4G18050.1 29.461 241 165 3 1231 1467 991 1230 1.27e-28 125
Msa0362450 AT4G18050.1 29.008 262 165 5 602 849 355 609 5.97e-22 103
Msa0362450 AT4G18050.1 29.412 272 158 8 588 829 968 1235 1.83e-20 99.4
Msa0362450 AT3G62150.3 23.256 559 391 15 942 1480 114 654 1.32e-32 139
Msa0362450 AT3G62150.3 28.112 249 172 4 1231 1474 1050 1296 1.05e-26 119
Msa0362450 AT3G62150.3 32.540 252 152 7 602 837 403 652 1.90e-26 119
Msa0362450 AT3G62150.3 31.651 218 130 5 614 814 1063 1278 4.67e-22 104
Msa0362450 AT3G62150.2 23.256 559 391 15 942 1480 114 654 1.32e-32 139
Msa0362450 AT3G62150.2 28.112 249 172 4 1231 1474 1050 1296 1.05e-26 119
Msa0362450 AT3G62150.2 32.540 252 152 7 602 837 403 652 1.90e-26 119
Msa0362450 AT3G62150.2 31.651 218 130 5 614 814 1063 1278 4.67e-22 104
Msa0362450 AT3G62150.1 23.256 559 391 15 942 1480 114 654 1.32e-32 139
Msa0362450 AT3G62150.1 28.112 249 172 4 1231 1474 1050 1296 1.05e-26 119
Msa0362450 AT3G62150.1 32.540 252 152 7 602 837 403 652 1.90e-26 119
Msa0362450 AT3G62150.1 31.651 218 130 5 614 814 1063 1278 4.67e-22 104
Msa0362450 AT5G46540.1 28.870 239 166 3 1231 1466 355 592 1.01e-31 135
Msa0362450 AT5G46540.1 29.752 242 165 3 1230 1467 1002 1242 6.37e-31 133
Msa0362450 AT5G46540.1 30.345 290 169 10 540 814 311 582 8.85e-25 113
Msa0362450 AT5G46540.1 29.412 272 158 6 588 829 980 1247 2.51e-21 102
Msa0362450 AT1G02530.2 28.870 239 166 3 1231 1466 366 603 2.38e-31 134
Msa0362450 AT1G02530.2 30.303 264 160 8 602 849 368 623 2.49e-20 98.6
Msa0362450 AT1G02530.1 28.870 239 166 3 1231 1466 366 603 5.47e-31 133
Msa0362450 AT1G02530.1 28.400 250 172 3 1231 1474 1025 1273 2.42e-29 128
Msa0362450 AT1G02530.1 29.032 310 183 11 545 829 974 1271 4.59e-22 104
Msa0362450 AT1G02530.1 31.579 228 139 6 602 814 368 593 2.65e-20 98.6
Msa0362450 AT4G28620.1 32.110 218 146 2 1231 1447 437 653 6.29e-31 131
Msa0362450 AT4G28620.1 32.776 299 164 12 549 822 384 670 4.82e-21 100
Msa0362450 AT1G10680.1 30.417 240 163 3 1231 1467 980 1218 2.30e-30 131
Msa0362450 AT1G10680.1 29.204 226 157 2 1244 1466 371 596 1.34e-25 115
Msa0362450 AT1G10680.1 32.218 239 142 5 602 823 982 1217 7.38e-25 113
Msa0362450 AT1G10680.1 31.278 227 135 6 606 815 365 587 2.84e-22 105
Msa0362450 AT4G28630.1 31.278 227 154 2 1231 1456 435 660 3.35e-30 129
Msa0362450 AT4G28630.1 31.000 300 168 12 549 822 382 668 1.30e-18 92.4
Msa0362450 AT1G27940.2 30.973 226 155 1 1231 1455 156 381 7.73e-30 129
Msa0362450 AT1G27940.2 30.000 240 164 3 1231 1467 788 1026 2.93e-28 124
Msa0362450 AT1G27940.2 29.078 282 174 8 562 823 116 391 6.81e-25 113
Msa0362450 AT1G27940.2 30.702 228 139 4 619 830 807 1031 1.19e-23 109
Msa0362450 AT1G27940.1 30.973 226 155 1 1231 1455 370 595 7.93e-30 129
Msa0362450 AT1G27940.1 30.000 240 164 3 1231 1467 1002 1240 3.06e-28 124
Msa0362450 AT1G27940.1 29.078 282 174 8 562 823 330 605 8.76e-25 113
Msa0362450 AT1G27940.1 30.702 228 139 4 619 830 1021 1245 1.75e-23 108
Msa0362450 AT5G03910.1 32.331 266 166 4 1200 1458 366 624 2.07e-29 126
Msa0362450 AT5G03910.1 24.742 485 310 13 378 832 170 629 4.97e-25 112
Msa0362450 AT5G58270.1 31.356 236 159 3 1231 1465 477 710 2.36e-29 127
Msa0362450 AT5G58270.1 31.624 234 141 5 619 836 494 724 4.50e-20 97.4
Msa0362450 AT4G01830.2 29.032 248 154 5 1231 1466 117 354 2.80e-29 127
Msa0362450 AT4G01830.2 28.821 229 160 1 1249 1474 768 996 1.26e-27 122
Msa0362450 AT4G01830.2 31.752 274 163 6 573 829 728 994 7.69e-26 116
Msa0362450 AT4G01830.2 32.895 228 136 6 602 814 119 344 2.14e-22 105
Msa0362450 AT4G01830.1 29.032 248 154 5 1231 1466 351 588 3.30e-29 127
Msa0362450 AT4G01830.1 28.821 229 160 1 1249 1474 1002 1230 1.20e-27 122
Msa0362450 AT4G01830.1 31.752 274 163 6 573 829 962 1228 8.50e-26 116
Msa0362450 AT4G01830.1 24.063 507 323 17 346 814 96 578 5.45e-23 107
Msa0362450 AT1G28010.1 29.317 249 174 2 1231 1478 371 618 8.50e-29 126
Msa0362450 AT1G28010.1 29.583 240 165 3 1231 1467 1004 1242 2.68e-26 118
Msa0362450 AT1G28010.1 29.078 282 174 7 562 823 331 606 2.90e-26 118
Msa0362450 AT1G28010.1 26.974 304 203 5 545 830 945 1247 9.42e-24 110
Msa0362450 AT5G39040.1 31.008 258 153 6 573 814 374 622 1.74e-28 123
Msa0362450 AT5G39040.1 21.933 538 382 10 941 1455 99 621 6.43e-26 115
Msa0362450 AT4G01820.2 27.197 239 170 3 1231 1466 346 583 3.69e-28 124
Msa0362450 AT4G01820.2 31.278 227 141 3 602 814 348 573 3.76e-21 101
Msa0362450 AT4G25960.1 28.807 243 163 5 1231 1467 1028 1266 3.95e-28 124
Msa0362450 AT4G25960.1 28.455 246 172 3 1231 1473 399 643 7.89e-27 120
Msa0362450 AT4G25960.1 25.887 479 284 16 381 815 176 627 9.89e-26 116
Msa0362450 AT4G25960.1 26.471 442 280 13 419 823 832 1265 4.32e-22 104
Msa0362450 AT4G01820.1 27.197 239 170 3 1231 1466 346 583 8.32e-28 123
Msa0362450 AT4G01820.1 27.602 221 151 2 1260 1474 1012 1229 3.45e-23 108
Msa0362450 AT4G01820.1 31.278 227 141 3 602 814 348 573 6.12e-21 100
Msa0362450 AT4G01820.1 29.960 247 155 4 602 831 984 1229 1.24e-19 96.7
Msa0362450 AT2G36910.1 28.696 230 160 3 1231 1457 1022 1250 4.54e-27 120
Msa0362450 AT2G36910.1 29.008 262 171 7 1231 1479 366 625 5.98e-26 117
Msa0362450 AT2G36910.1 29.851 268 166 6 602 848 368 634 3.19e-24 111
Msa0362450 AT2G36910.1 30.901 233 142 4 602 818 1024 1253 2.42e-22 105
Msa0362450 AT4G25450.3 33.484 221 143 2 1249 1466 318 537 2.97e-26 115
Msa0362450 AT4G25450.3 29.583 240 152 4 606 829 305 543 4.19e-21 99.8
Msa0362450 AT4G25450.1 33.484 221 143 2 1249 1466 487 706 4.37e-26 116
Msa0362450 AT4G25450.1 29.167 240 153 3 606 829 474 712 3.04e-21 101
Msa0362450 AT1G10680.2 29.204 226 157 2 1244 1466 371 596 7.83e-26 116
Msa0362450 AT1G10680.2 31.278 227 135 6 606 815 365 587 2.92e-22 105
Msa0362450 AT1G10680.2 29.348 184 126 3 1231 1411 980 1162 1.93e-19 95.9
Msa0362450 AT1G10680.2 34.091 176 98 3 602 761 982 1155 1.30e-16 86.7
Msa0362450 AT1G70610.2 26.877 413 251 14 451 830 124 518 6.15e-24 108
Msa0362450 AT1G70610.2 22.421 504 335 13 1000 1476 43 517 5.80e-22 102
Msa0362450 AT1G70610.1 26.877 413 251 14 451 830 305 699 9.42e-24 108
Msa0362450 AT1G70610.1 21.835 545 370 13 959 1476 183 698 1.02e-21 102
Msa0362450 AT2G39480.1 26.432 227 164 2 1231 1455 410 635 2.09e-21 102
Msa0362450 AT2G39480.1 30.180 222 150 4 1230 1447 1155 1375 8.30e-21 100
Msa0362450 AT2G39480.1 30.453 243 149 6 601 826 1157 1396 3.50e-17 88.6
Msa0362450 AT2G39480.1 28.814 236 152 5 602 823 412 645 3.01e-15 82.4
Msa0362450 AT2G39480.2 26.432 227 164 2 1231 1455 230 455 2.10e-21 102
Msa0362450 AT2G39480.2 30.180 222 150 4 1230 1447 975 1195 8.65e-21 100
Msa0362450 AT2G39480.2 30.453 243 149 6 601 826 977 1216 3.07e-17 88.6
Msa0362450 AT2G39480.2 28.814 236 152 5 602 823 232 465 2.70e-15 82.4
Msa0362450 AT3G55320.1 25.991 227 165 2 1231 1455 412 637 1.01e-20 100
Msa0362450 AT3G55320.1 27.731 238 167 4 1214 1447 1140 1376 3.90e-19 95.1
Msa0362450 AT3G55320.1 29.431 299 187 9 545 826 1106 1397 9.34e-17 87.0
Msa0362450 AT3G55320.1 27.966 236 154 5 602 823 414 647 2.64e-14 79.3
Msa0362450 AT1G67940.1 30.631 222 136 6 1241 1454 36 247 4.72e-20 92.0
Msa0362450 AT1G67940.1 30.189 212 122 9 619 812 44 247 1.17e-14 76.3
Msa0362450 AT4G33460.1 30.702 228 132 9 595 807 33 249 3.09e-12 69.3
Msa0362450 AT4G39850.3 28.070 228 149 6 1219 1441 434 651 9.46e-11 67.4

Find 264 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGATCATATTTGTATTT+TGG 0.174042 3_1:-53649476 Msa0362450:CDS
TTTGGTTCTTGTATGGTTAT+AGG 0.177225 3_1:-53649423 Msa0362450:CDS
CTTGGCATCGCTTCAATTTC+CGG 0.180227 3_1:-53649732 Msa0362450:CDS
GACAGAAAAGACAGTTTATT+TGG 0.187578 3_1:-53650275 Msa0362450:CDS
TTTGGCGATCAAACAATTAT+TGG 0.192502 3_1:-53648862 Msa0362450:CDS
TCTTTCTACGGATATAATTT+TGG 0.192815 3_1:+53645975 None:intergenic
TTCTTTCCAACAGAAATTAA+TGG 0.193570 3_1:+53650332 None:intergenic
AGTACAGAGATGAACAAATT+TGG 0.196995 3_1:-53645365 Msa0362450:CDS
TCAGAAAGAGTGAGCAATTT+TGG 0.202906 3_1:-53649524 Msa0362450:CDS
TACAGGATCTCATCTATTTA+AGG 0.208550 3_1:-53648722 Msa0362450:intron
GCATTCGACTTTATTTCTTT+TGG 0.209646 3_1:-53644096 Msa0362450:three_prime_UTR
TTGGTTCTTGTATGGTTATA+GGG 0.219577 3_1:-53649422 Msa0362450:CDS
ACTTTACTTTCAAGTGTATT+AGG 0.221866 3_1:-53649069 Msa0362450:CDS
TTCAAATTGGAAGCAACTAT+TGG 0.238628 3_1:-53647857 Msa0362450:CDS
TGAAAATGAAGGCCTTATTT+TGG 0.239386 3_1:-53650039 Msa0362450:CDS
CAAGTGGAAGAATCCTTAAT+AGG 0.249695 3_1:-53647617 Msa0362450:CDS
TTATACAAGCATGGATGATA+TGG 0.261079 3_1:-53646017 Msa0362450:CDS
CATATTGTTTGGGATGGATA+TGG 0.262762 3_1:-53648950 Msa0362450:CDS
TTGTTTCAACTTCTTCAAAT+TGG 0.264017 3_1:-53647870 Msa0362450:CDS
GTTATCACTTGCATGATCTT+TGG 0.277238 3_1:-53649803 Msa0362450:CDS
AATTCCAAGGAGATGGATTA+TGG 0.281754 3_1:+53646941 None:intergenic
TCTCTCTTTGCTACTGTCTC+TGG 0.283149 3_1:+53650892 None:intergenic
GCCGCTAGTGTGGCCTTGTT+TGG 0.295356 3_1:+53649875 None:intergenic
TGAAAAGCTTGTGACCCTTT+TGG 0.297755 3_1:-53650756 Msa0362450:CDS
TTGGCGATCAAACAATTATT+GGG 0.299697 3_1:-53648861 Msa0362450:CDS
TCTTGAACAAGTTGTCCTTT+TGG 0.301001 3_1:+53647996 None:intergenic
CGAATCGTTGAGCCTACTTT+TGG 0.304450 3_1:-53645519 Msa0362450:CDS
CTATTATTGTGGACGAAAAC+TGG 0.309189 3_1:+53644177 None:intergenic
CGCCCCAAGTTCAATATTGC+CGG 0.311219 3_1:-53646279 Msa0362450:CDS
AGGTACTGTAAGGAGTAATT+TGG 0.317218 3_1:-53645400 Msa0362450:CDS
TCAGCATTCTTACATTCTCT+TGG 0.325285 3_1:-53650361 Msa0362450:CDS
TTGGCATCGCTTCAATTTCC+GGG 0.327095 3_1:-53649731 Msa0362450:CDS
CAGCTCCTCATACCCTATTA+AGG 0.332607 3_1:+53647604 None:intergenic
GTGTCTGGAAGATTATAAAT+AGG 0.334131 3_1:+53649339 None:intergenic
GGCGTTCAAAACAGTTTCTT+GGG 0.336004 3_1:-53650729 Msa0362450:CDS
TGGCGTTCAAAACAGTTTCT+TGG 0.338854 3_1:-53650730 Msa0362450:CDS
ATAGAAGATAACATATTGTT+TGG 0.340417 3_1:-53648961 Msa0362450:CDS
CCTAGTTGTCTATGTATGTT+TGG 0.343428 3_1:-53647775 Msa0362450:CDS
TGTTCTCTAGCAATCTTGTT+GGG 0.343484 3_1:+53644251 None:intergenic
TCAAATTCATATTTGTTTGT+TGG 0.346225 3_1:+53646316 None:intergenic
CCATTGGACTTCATGATTTG+AGG 0.348278 3_1:-53645464 Msa0362450:CDS
GAAAGAGAGCAAGGTGAAGT+TGG 0.353952 3_1:-53647969 Msa0362450:CDS
AGCAATCAGCATCTGGTATC+AGG 0.355994 3_1:-53646862 Msa0362450:intron
GAAGTTTCAAAACAAGTTGA+TGG 0.357415 3_1:-53649652 Msa0362450:CDS
CACTTCGCCGAAACAATTTC+AGG 0.360074 3_1:-53646378 Msa0362450:CDS
TCTCCATCTACTCCTGTTAG+TGG 0.363400 3_1:-53650960 Msa0362450:CDS
CCATCTCCTTGGAATTATAA+TGG 0.363927 3_1:-53646934 Msa0362450:CDS
TTCAACGATGTCACAATGTA+AGG 0.364413 3_1:-53649313 Msa0362450:CDS
AAAATGCAGACACCAAAATA+AGG 0.365785 3_1:+53650027 None:intergenic
ACCTGCTGCTGACCTTATCT+TGG 0.368279 3_1:-53648356 Msa0362450:intron
TCAGAAACCAAGCATTGAAT+TGG 0.370769 3_1:+53650548 None:intergenic
GCTTAAGAAAAGTAAAGTTT+TGG 0.370821 3_1:-53644543 Msa0362450:CDS
GGCCTTACATGCACATTTGT+TGG 0.373237 3_1:-53645609 Msa0362450:CDS
ACTGGAATTGTTGGAAGAAC+AGG 0.373343 3_1:-53645576 Msa0362450:CDS
CAGCATTCTTACATTCTCTT+GGG 0.376207 3_1:-53650360 Msa0362450:CDS
TTTGTTGGAGGAATGAAAAC+TGG 0.376591 3_1:-53645594 Msa0362450:CDS
ATAGGGGTCCCACTTGAATC+AGG 0.384207 3_1:-53649405 Msa0362450:CDS
ACAAACAAATATGAATTTGA+TGG 0.386026 3_1:-53646313 Msa0362450:CDS
CTTGTATAATGTTCAGATTA+AGG 0.386200 3_1:+53646031 None:intergenic
GCTGGTTTAGCTGTGACATA+TGG 0.390440 3_1:-53646054 Msa0362450:CDS
TGAGCATCAAGAGCACTAAA+AGG 0.393622 3_1:+53648745 None:intergenic
AGACTAAAAGTGCCACTAAC+AGG 0.395201 3_1:+53650948 None:intergenic
AGTTTGCTGTATCAAATTAT+CGG 0.395701 3_1:+53644484 None:intergenic
TTTGTGTCTGTGGTTACTTT+TGG 0.396955 3_1:-53649441 Msa0362450:CDS
TGCTATTCCAATTCAATGCT+TGG 0.397483 3_1:-53650555 Msa0362450:CDS
CGAGTTGTGGAACGTCTTCA+AGG 0.397605 3_1:+53650297 None:intergenic
AAAGAGAGCAAGGTGAAGTT+GGG 0.400030 3_1:-53647968 Msa0362450:CDS
GAATGGTGAGAATTGGAGTA+TGG 0.401623 3_1:-53644600 Msa0362450:CDS
ATCTTGCTACTTTGTATCCA+TGG 0.403072 3_1:+53648982 None:intergenic
GTACAGAGATGAACAAATTT+GGG 0.404624 3_1:-53645364 Msa0362450:CDS
CCACAAGGAGTCATAAATTC+AGG 0.409469 3_1:-53646174 Msa0362450:intron
AAAACCGGCCACATGATTCT+TGG 0.413123 3_1:-53645903 Msa0362450:CDS
ACAGTACCTTCAAACATAGT+TGG 0.417978 3_1:+53645414 None:intergenic
CAGATGCTGATTGCTGTCAT+AGG 0.418034 3_1:+53646870 None:intergenic
AATGTAAGGTTTCTCTTGAC+AGG 0.418863 3_1:-53649299 Msa0362450:CDS
ATAGCTATTGAAGTAGTTGA+TGG 0.420050 3_1:-53649204 Msa0362450:CDS
AAGTGGAAGAATCCTTAATA+GGG 0.421076 3_1:-53647616 Msa0362450:intron
CATGATTCTTGGCCATCATA+TGG 0.421316 3_1:-53645892 Msa0362450:CDS
TGAAGCATGTTCACTAAAGA+AGG 0.421783 3_1:-53648902 Msa0362450:CDS
TGAGTGAGAATGGTGAGAAT+TGG 0.422492 3_1:-53644607 Msa0362450:CDS
GTGTTGAATGACAGGAGCTT+TGG 0.422568 3_1:+53646398 None:intergenic
CTCCAACAAATGTGCATGTA+AGG 0.422763 3_1:+53645607 None:intergenic
GAAAAGCCATGCAAGAAAAC+TGG 0.424308 3_1:+53650989 None:intergenic
CTCTCGTTGTAGAGGAAAAC+CGG 0.428098 3_1:-53645918 Msa0362450:CDS
AGTGCTCTTGATGCTCATAC+AGG 0.429088 3_1:-53648739 Msa0362450:CDS
TAGAAGATAACATATTGTTT+GGG 0.433313 3_1:-53648960 Msa0362450:CDS
CTATGTGTCTCTCTTCCTCT+TGG 0.434414 3_1:-53648080 Msa0362450:CDS
GATGTCTCAGGTTGCATGGC+AGG 0.438386 3_1:-53646910 Msa0362450:CDS
GCTATATGTGAACTTCCCTT+TGG 0.439422 3_1:+53649222 None:intergenic
GTGCCACTAACAGGAGTAGA+TGG 0.441014 3_1:+53650957 None:intergenic
ATTTGTGGTACCGTTGGATC+GGG 0.444470 3_1:-53649099 Msa0362450:CDS
GTTCAATATTGCCGGGGCTA+TGG 0.445574 3_1:-53646271 Msa0362450:CDS
TGATGTACCTGAAATTGTTT+CGG 0.446707 3_1:+53646371 None:intergenic
CTATGACAGCAATCAGCATC+TGG 0.448268 3_1:-53646869 Msa0362450:CDS
GGTTGATATACAAAACTTGC+AGG 0.452026 3_1:-53645866 Msa0362450:intron
GACGAAGTTAGAAGGAAAGA+AGG 0.452119 3_1:-53644738 Msa0362450:CDS
ATTCTTACATTCTCTTGGGT+TGG 0.452489 3_1:-53650356 Msa0362450:CDS
AACTTGGAGACGAAGTTAGA+AGG 0.453476 3_1:-53644746 Msa0362450:CDS
CAAAAGTAGGCTCAACGATT+CGG 0.455965 3_1:+53645520 None:intergenic
AGCCCCGGCAATATTGAACT+TGG 0.458298 3_1:+53646275 None:intergenic
AACTACATCACGACAGCATA+TGG 0.458602 3_1:-53647930 Msa0362450:CDS
AAGATTGAGCATTATTCCTC+AGG 0.462643 3_1:-53645439 Msa0362450:CDS
TTGTTCTCTAGCAATCTTGT+TGG 0.465189 3_1:+53644250 None:intergenic
GTTTGGGATGGATATGGAAA+GGG 0.465885 3_1:-53648944 Msa0362450:CDS
GCCCCAAGTTCAATATTGCC+GGG 0.469003 3_1:-53646278 Msa0362450:CDS
ATGAGGATTCTCAAACTTCA+AGG 0.470016 3_1:-53649582 Msa0362450:CDS
TGTCATTGTTCTTCAAACCT+TGG 0.473106 3_1:-53650646 Msa0362450:CDS
ATCAAACAATTATTGGGGAG+AGG 0.475145 3_1:-53648855 Msa0362450:CDS
GGAATGAAAACTGGAATTGT+TGG 0.475205 3_1:-53645585 Msa0362450:CDS
AACAATCAGAAGCTTTGATC+AGG 0.477562 3_1:-53646349 Msa0362450:CDS
GAAAACTGGTTTCACACTCA+TGG 0.482042 3_1:+53651003 None:intergenic
GTTGGTCCATTAATTTCTGT+TGG 0.485070 3_1:-53650338 Msa0362450:CDS
TAAGATAAGTACATCACAAC+AGG 0.485520 3_1:-53648105 Msa0362450:CDS
TAACACATTGGCTTCTTACG+TGG 0.485698 3_1:-53650114 Msa0362450:CDS
GACATCGTTGAAATTGTGTC+TGG 0.487260 3_1:+53649324 None:intergenic
CAGGATCCAACTATGTTTGA+AGG 0.487366 3_1:-53645420 Msa0362450:CDS
AGTTGATGGAAACTTCTCTT+GGG 0.487719 3_1:-53649190 Msa0362450:CDS
ATTTGATACAGCAAACTCTT+CGG 0.488877 3_1:-53644478 Msa0362450:CDS
GCACATAATGCAGTTTGAAA+AGG 0.488904 3_1:+53646969 None:intergenic
TTTGTATTACCATTCAAAAG+AGG 0.489065 3_1:+53650434 None:intergenic
TTGTTTGTGTCTTTCTTGAA+AGG 0.490269 3_1:-53650703 Msa0362450:CDS
TAGTTGATGGAAACTTCTCT+TGG 0.490283 3_1:-53649191 Msa0362450:CDS
GAAGGAAAATTAGACTCAGC+AGG 0.491191 3_1:-53644720 Msa0362450:intron
CAAGCAAAAGGAAAATGTAA+TGG 0.491937 3_1:+53646215 None:intergenic
AACATTAACATATCTTCCAT+TGG 0.492746 3_1:-53645480 Msa0362450:CDS
CCATTATAATTCCAAGGAGA+TGG 0.493115 3_1:+53646934 None:intergenic
ATCATAATTCTTCCAAAAGT+AGG 0.494521 3_1:+53645507 None:intergenic
TGCAACTATCATTGTAATGT+TGG 0.495257 3_1:-53649703 Msa0362450:CDS
AATTATAATGGTGATGTCTC+AGG 0.495966 3_1:-53646922 Msa0362450:CDS
AAAATTCCAGCATTAGAGTA+AGG 0.496998 3_1:+53650383 None:intergenic
CAGAGGCAGTTGGTTTGTCT+AGG 0.497495 3_1:-53644575 Msa0362450:CDS
GCAGTTGGTTTGTCTAGGTA+GGG 0.498227 3_1:-53644570 Msa0362450:CDS
CAGCAATATTATATACCATC+AGG 0.499244 3_1:-53646450 Msa0362450:CDS
TCATCTCTGTACTCTTCTAG+TGG 0.500349 3_1:+53645375 None:intergenic
TACTTGTATCCACTTCACTT+TGG 0.500826 3_1:+53646994 None:intergenic
TCGGCGAAGTGTTGAATGAC+AGG 0.502388 3_1:+53646390 None:intergenic
TCAAGCTTATCCTTGAAATA+CGG 0.503931 3_1:+53650245 None:intergenic
TCTGCACTTGATTCATCAGA+TGG 0.504417 3_1:-53648146 Msa0362450:CDS
TATTTGTGGTACCGTTGGAT+CGG 0.504739 3_1:-53649100 Msa0362450:CDS
GCACTAGACAAGTGTCAACT+TGG 0.505312 3_1:-53644762 Msa0362450:CDS
AGGAGTGTAGTTCCTCCAAC+AGG 0.507103 3_1:+53647795 None:intergenic
TTCAATATCTTAATGGACAA+AGG 0.507530 3_1:-53650067 Msa0362450:CDS
CTATTAAGGATTCTTCCACT+TGG 0.507737 3_1:+53647618 None:intergenic
TGCTCCATAATCCATCTCCT+TGG 0.507949 3_1:-53646945 Msa0362450:CDS
GGCAGTTGGTTTGTCTAGGT+AGG 0.508758 3_1:-53644571 Msa0362450:CDS
AATTGGAAGCAACTATTGGA+TGG 0.509516 3_1:-53647853 Msa0362450:CDS
CAACAAGTGTTGCTCGAGAT+AGG 0.509836 3_1:+53647730 None:intergenic
GTTGCTATTTGTGGTACCGT+TGG 0.510744 3_1:-53649105 Msa0362450:CDS
TATCAAGAATAACAAGCAAA+AGG 0.511028 3_1:+53646203 None:intergenic
GCCCCGGCAATATTGAACTT+GGG 0.512239 3_1:+53646276 None:intergenic
TGCAACACAAGTGGCATATG+TGG 0.512744 3_1:+53645633 None:intergenic
GTTACTCCTTACTCTAATGC+TGG 0.515329 3_1:-53650389 Msa0362450:CDS
GGAATGAAAGTTGCTATTTG+TGG 0.517886 3_1:-53649114 Msa0362450:CDS
GCAACACTTGTTGTCACCGC+TGG 0.518462 3_1:-53647720 Msa0362450:CDS
GTGTCTTACAAAGAGGCAAT+GGG 0.518777 3_1:-53649985 Msa0362450:CDS
ATGTTCACTAAAGAAGGATC+TGG 0.521070 3_1:-53648896 Msa0362450:CDS
ATATCAACCGTTCCATATGA+TGG 0.521206 3_1:+53645880 None:intergenic
TCACTTGCATGATCTTTGGT+TGG 0.521945 3_1:-53649799 Msa0362450:CDS
AGATAACATATTGTTTGGGA+TGG 0.522837 3_1:-53648956 Msa0362450:CDS
AAATATAAACACTATTATTG+TGG 0.526662 3_1:+53644166 None:intergenic
CACTAATGCAGGACTAATTG+AGG 0.527136 3_1:-53644284 Msa0362450:intron
TATACAAGCATGGATGATAT+GGG 0.529163 3_1:-53646016 Msa0362450:CDS
GACACATAAAGAACTTCCTA+TGG 0.530280 3_1:+53647752 None:intergenic
TGGTTCTTGTATGGTTATAG+GGG 0.530870 3_1:-53649421 Msa0362450:CDS
CCTGAATTTATGACTCCTTG+TGG 0.531073 3_1:+53646174 None:intergenic
AATGGCAAGTTTGAGCCAAA+AGG 0.532231 3_1:-53648011 Msa0362450:CDS
ATCAAGAGATAAAAGAATGA+AGG 0.532320 3_1:-53649628 Msa0362450:CDS
GAGAAGAAAGAAGTACAGAA+TGG 0.534345 3_1:-53648041 Msa0362450:CDS
ATCGTTCTACTACTTAATGA+AGG 0.536440 3_1:-53644389 Msa0362450:intron
AATGATAGTTGCAACAAGCC+CGG 0.538580 3_1:+53649713 None:intergenic
ACAACGAGAGAAGGCTCGCT+AGG 0.539704 3_1:+53645931 None:intergenic
GGTAATACAAAAGAAACTAG+AGG 0.540564 3_1:-53650422 Msa0362450:CDS
TGCACCAGCATTTGTGTCTG+TGG 0.543187 3_1:-53649451 Msa0362450:CDS
TTCTCTAGGATTGACACTAA+AGG 0.543232 3_1:+53649672 None:intergenic
AAAGATGTTGAGCCACCTGT+TGG 0.543637 3_1:-53647810 Msa0362450:CDS
CATGAAGTTGTGTGGAACAA+AGG 0.544304 3_1:-53649022 Msa0362450:CDS
CTTACATGCACATTTGTTGG+AGG 0.544483 3_1:-53645606 Msa0362450:CDS
GTTCTCTAGCAATCTTGTTG+GGG 0.545047 3_1:+53644252 None:intergenic
ACAAATATGAATTTGATGGA+TGG 0.545474 3_1:-53646309 Msa0362450:CDS
CTATGTTTGAAGGTACTGTA+AGG 0.547573 3_1:-53645410 Msa0362450:CDS
CGACTAAACGAGATAGTTCA+CGG 0.547727 3_1:+53646427 None:intergenic
TGTTTGGGATGGATATGGAA+AGG 0.548351 3_1:-53648945 Msa0362450:CDS
GATGTTGAGCCACCTGTTGG+AGG 0.548427 3_1:-53647807 Msa0362450:CDS
GTCTATGTATGTTTGGCCAT+AGG 0.551126 3_1:-53647768 Msa0362450:CDS
TATGTTGCAGTGAGTGAGAA+TGG 0.551705 3_1:-53644617 Msa0362450:intron
ATCTGAACATTATACAAGCA+TGG 0.553342 3_1:-53646026 Msa0362450:CDS
CGAGATAGTTCACGGCCTGA+TGG 0.553892 3_1:+53646435 None:intergenic
AGTCATTAGCATTCTCAGCT+CGG 0.554113 3_1:-53650172 Msa0362450:CDS
TCAAACAATTATTGGGGAGA+GGG 0.554681 3_1:-53648854 Msa0362450:CDS
CAAGAAGAAGAAAGAGAGCA+AGG 0.556524 3_1:-53647978 Msa0362450:CDS
GATTCTCAAACTTCAAGGAT+GGG 0.557656 3_1:-53649577 Msa0362450:CDS
GGATTCTCAAACTTCAAGGA+TGG 0.561676 3_1:-53649578 Msa0362450:CDS
AGTGTCTTACAAAGAGGCAA+TGG 0.561924 3_1:-53649986 Msa0362450:CDS
CCTCAAATCATGAAGTCCAA+TGG 0.562290 3_1:+53645464 None:intergenic
ATTGTTGGAAGAACAGGAAG+TGG 0.562342 3_1:-53645570 Msa0362450:CDS
ATATTGCCGGGGCTATGGAA+TGG 0.563368 3_1:-53646266 Msa0362450:CDS
ATTGTTGAGAAGCTTCCAAA+GGG 0.564417 3_1:-53649237 Msa0362450:CDS
CGAGCCTTCTCTCGTTGTAG+AGG 0.565481 3_1:-53645926 Msa0362450:CDS
CCAAACATACATAGACAACT+AGG 0.566395 3_1:+53647775 None:intergenic
GATGGAGAAATTACTCAATG+TGG 0.566887 3_1:-53648239 Msa0362450:CDS
CATATGCCACTTGTGTTGCA+TGG 0.567410 3_1:-53645630 Msa0362450:CDS
ATACTGAAGAATTCTTTCTA+CGG 0.568728 3_1:+53645963 None:intergenic
AGCAATAACATGAAACAAAG+AGG 0.569803 3_1:+53650612 None:intergenic
TTTGAACGCCAAATCCAAAA+GGG 0.570938 3_1:+53650742 None:intergenic
AGACAACCATTCCATAGCCC+CGG 0.571388 3_1:+53646260 None:intergenic
AAGGATTCTTCCACTTGGAG+TGG 0.571752 3_1:+53647623 None:intergenic
CCCCGGCAATATTGAACTTG+GGG 0.572802 3_1:+53646277 None:intergenic
ACAAAATTATCTATAAGATA+CGG 0.577358 3_1:+53650089 None:intergenic
TAATTGTTACAAGAAGAGCT+TGG 0.578562 3_1:+53649931 None:intergenic
GTACAGAATGGTGGAACGAA+TGG 0.579755 3_1:-53648029 Msa0362450:CDS
AACACATTGGCTTCTTACGT+GGG 0.580370 3_1:-53650113 Msa0362450:CDS
TCAGGGATCATGAAGTTGTG+TGG 0.587839 3_1:-53649030 Msa0362450:CDS
ACCAAGATAAGGTCAGCAGC+AGG 0.588609 3_1:+53648355 None:intergenic
GATAAGCTTGAGGCATATTG+TGG 0.590176 3_1:-53650233 Msa0362450:CDS
TGGCGATCAAACAATTATTG+GGG 0.592344 3_1:-53648860 Msa0362450:CDS
AAGAAAGAAGTACAGAATGG+TGG 0.595879 3_1:-53648038 Msa0362450:CDS
TATAATGATCTACTCAACTC+AGG 0.598290 3_1:-53648212 Msa0362450:CDS
GGTTTGAAGAACAATGACAT+TGG 0.598299 3_1:+53650650 None:intergenic
AAGATCTTCCCTGATTCAAG+TGG 0.601950 3_1:+53649396 None:intergenic
AGCCGTGTCAACTGATGCAG+TGG 0.602242 3_1:+53644508 None:intergenic
TTCTTGGCCATCATATGGAA+CGG 0.602559 3_1:-53645887 Msa0362450:CDS
TTCATGTTATTGCTTTACCG+TGG 0.603132 3_1:-53650603 Msa0362450:CDS
GAGTATGGGTCAGAGGCAGT+TGG 0.606488 3_1:-53644585 Msa0362450:CDS
CAAACAATTATTGGGGAGAG+GGG 0.607219 3_1:-53648853 Msa0362450:CDS
ATGGCCAAGAATCATGTGGC+CGG 0.607265 3_1:+53645899 None:intergenic
ACATCACCATTATAATTCCA+AGG 0.607280 3_1:+53646928 None:intergenic
AAAACTGGAGTTCGATCTAG+TGG 0.608045 3_1:+53644192 None:intergenic
AGAATTGGAGTATGGGTCAG+AGG 0.608813 3_1:-53644592 Msa0362450:CDS
GTATTTCAAGGATAAGCTTG+AGG 0.609028 3_1:-53650243 Msa0362450:CDS
CTTATGTAGCACAGTCACCA+TGG 0.610606 3_1:-53648999 Msa0362450:CDS
TTCTACTGACCAAAGTGAAG+TGG 0.612229 3_1:-53647003 Msa0362450:CDS
ACTGTTGATGCTGAAAGAGT+TGG 0.612973 3_1:-53649834 Msa0362450:CDS
TATTGTTGAGAAGCTTCCAA+AGG 0.613360 3_1:-53649238 Msa0362450:CDS
CGTGAACTATCTCGTTTAGT+CGG 0.613676 3_1:-53646426 Msa0362450:CDS
GTAATACAAAAGAAACTAGA+GGG 0.615258 3_1:-53650421 Msa0362450:CDS
TGATTATCTCGCCGCTAGTG+TGG 0.615610 3_1:+53649865 None:intergenic
TTGTGGAGTGTCTTACAAAG+AGG 0.616615 3_1:-53649992 Msa0362450:CDS
CTTGATTCATCAGATGGAGA+TGG 0.618017 3_1:-53648140 Msa0362450:CDS
CTTTCATGTCAATCCAAACA+AGG 0.618956 3_1:-53649888 Msa0362450:CDS
GTAACCACAGACACAAATGC+TGG 0.621898 3_1:+53649447 None:intergenic
AGGGGAATAAATTTGAGTGG+TGG 0.623868 3_1:-53648835 Msa0362450:CDS
TAGGGGTCCCACTTGAATCA+GGG 0.628734 3_1:-53649404 Msa0362450:CDS
TGATCTACTCAACTCAGGCA+CGG 0.635351 3_1:-53648207 Msa0362450:CDS
GCGTTCAAAACAGTTTCTTG+GGG 0.638282 3_1:-53650728 Msa0362450:CDS
TGGTGATGTCTCAGGTTGCA+TGG 0.639152 3_1:-53646914 Msa0362450:CDS
TCCAAACAAGGCCACACTAG+CGG 0.639635 3_1:-53649876 Msa0362450:CDS
AATGGTGAGAATTGGAGTAT+GGG 0.644156 3_1:-53644599 Msa0362450:CDS
TGACTTCACTAGCTTAAATG+TGG 0.647220 3_1:+53650190 None:intergenic
AGCCACTGCATCAGTTGACA+CGG 0.649261 3_1:-53644510 Msa0362450:CDS
GTAAGGCCATGCAACACAAG+TGG 0.650288 3_1:+53645624 None:intergenic
ATTTCAGCTATTAATACGAG+CGG 0.652248 3_1:+53647894 None:intergenic
TCAAACATAGTTGGATCCTG+AGG 0.654050 3_1:+53645423 None:intergenic
CCCCAAGTTCAATATTGCCG+GGG 0.655922 3_1:-53646277 Msa0362450:CDS
AGATCTTCCCTGATTCAAGT+GGG 0.660973 3_1:+53649397 None:intergenic
TTCTTGATATCAGTTCCACA+AGG 0.662499 3_1:-53646189 Msa0362450:CDS
TACGTAGAGAACAATCTCCA+CGG 0.663238 3_1:+53650586 None:intergenic
AGTGTAGTTCCTCCAACAGG+TGG 0.668847 3_1:+53647798 None:intergenic
AAGAGGTAAAAGACACACCA+AGG 0.675679 3_1:+53650629 None:intergenic
TACATCACGACAGCATATGG+AGG 0.686432 3_1:-53647927 Msa0362450:CDS
CAGAGATGAACAAATTTGGG+AGG 0.687112 3_1:-53645361 Msa0362450:intron
GTTCCTTAAAATCTCAGACG+TGG 0.688891 3_1:+53649605 None:intergenic
TATGATGGCCAAGAATCATG+TGG 0.693588 3_1:+53645895 None:intergenic
GGTAGCTGTCTTATATCCAG+CGG 0.705307 3_1:+53647704 None:intergenic
GAGAGGGGAATAAATTTGAG+TGG 0.713016 3_1:-53648838 Msa0362450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTCTTTTATTATATAAAT+AGG + chr3_1:53648317-53648336 None:intergenic 10.0%
!!! TGTTTTTTTATGAAAAATGA+GGG - chr3_1:53644557-53644576 Msa0362450:CDS 15.0%
!! ACAAAATTATCTATAAGATA+CGG + chr3_1:53644956-53644975 None:intergenic 15.0%
!!! AATTTTGTTCAATATCTTAA+TGG - chr3_1:53644968-53644987 Msa0362450:intron 15.0%
!!! TTTGTTTTGTATAAAAATCT+TGG - chr3_1:53645292-53645311 Msa0362450:intron 15.0%
!!! ATAAATCTTAAAGTTTTTCA+TGG - chr3_1:53645907-53645926 Msa0362450:CDS 15.0%
!! CATAATTTGAAAAGATAAAT+AGG + chr3_1:53646762-53646781 None:intergenic 15.0%
!! TATATAAATAGGTTATATAC+AGG + chr3_1:53648306-53648325 None:intergenic 15.0%
!! AAATATAAACACTATTATTG+TGG + chr3_1:53650879-53650898 None:intergenic 15.0%
!!! GTGTTTTTTTATGAAAAATG+AGG - chr3_1:53644556-53644575 Msa0362450:CDS 20.0%
!! ATAGAAGATAACATATTGTT+TGG - chr3_1:53646081-53646100 Msa0362450:intron 20.0%
!! TAGAAGATAACATATTGTTT+GGG - chr3_1:53646082-53646101 Msa0362450:intron 20.0%
!!! TCAAATTATGCATTCTTTTA+AGG - chr3_1:53646772-53646791 Msa0362450:intron 20.0%
!! TTTCGATTGAATATGTAAAT+TGG - chr3_1:53647486-53647505 Msa0362450:intron 20.0%
!!! ATATCTCTGAAATTGTATAT+AGG - chr3_1:53647567-53647586 Msa0362450:intron 20.0%
!! TCAAATTCATATTTGTTTGT+TGG + chr3_1:53648729-53648748 None:intergenic 20.0%
!! ACAAACAAATATGAATTTGA+TGG - chr3_1:53648729-53648748 Msa0362450:CDS 20.0%
!! TTCATGGTAATCTTATAAAT+TGG - chr3_1:53649850-53649869 Msa0362450:CDS 20.0%
!!! CGATTATTTTTTTATTATCC+AGG + chr3_1:53649917-53649936 None:intergenic 20.0%
!! ATATGAAAAAAAACGTAAAC+AGG + chr3_1:53650004-53650023 None:intergenic 20.0%
!!! TCATATGTATTTTTTTAACC+AGG - chr3_1:53650018-53650037 Msa0362450:CDS 20.0%
!! CTATAAGTAGAGTTTAAAAA+AGG + chr3_1:53650214-53650233 None:intergenic 20.0%
!!! TCTGATTAACATTCTTTTAT+AGG - chr3_1:53650258-53650277 Msa0362450:CDS 20.0%
!!! ACTTTTTGATATGATTTCAT+TGG - chr3_1:53650734-53650753 Msa0362450:CDS 20.0%
!!! TTGTTGATCTTTTTTAATCA+TGG - chr3_1:53650908-53650927 Msa0362450:CDS 20.0%
!!! TTTTGTTTGATTACTTCAGT+TGG - chr3_1:53644243-53644262 Msa0362450:CDS 25.0%
! TTTGTATTACCATTCAAAAG+AGG + chr3_1:53644611-53644630 None:intergenic 25.0%
! GTAATACAAAAGAAACTAGA+GGG - chr3_1:53644621-53644640 Msa0362450:intron 25.0%
! TTCTTTCCAACAGAAATTAA+TGG + chr3_1:53644713-53644732 None:intergenic 25.0%
!!! TTTTGCATTTGTTAACACAT+TGG - chr3_1:53644916-53644935 Msa0362450:intron 25.0%
!! TTCAATATCTTAATGGACAA+AGG - chr3_1:53644975-53644994 Msa0362450:intron 25.0%
! ATCAAGAGATAAAAGAATGA+AGG - chr3_1:53645414-53645433 Msa0362450:CDS 25.0%
!! CTGTGATCATATTTGTATTT+TGG - chr3_1:53645566-53645585 Msa0362450:CDS 25.0%
!!! ATGTTTTTCAATACTGCATT+CGG + chr3_1:53645889-53645908 None:intergenic 25.0%
!! ACTTTACTTTCAAGTGTATT+AGG - chr3_1:53645973-53645992 Msa0362450:CDS 25.0%
! ACTGTAATAATTCGAATAAC+CGG - chr3_1:53646458-53646477 Msa0362450:intron 25.0%
! TTATTGAATGTAACCACATA+TGG - chr3_1:53646484-53646503 Msa0362450:intron 25.0%
!!! TCTTTTAAGGTTATGAAAGA+TGG - chr3_1:53646785-53646804 Msa0362450:intron 25.0%
! TTGTTTCAACTTCTTCAAAT+TGG - chr3_1:53647172-53647191 Msa0362450:intron 25.0%
!! GTCCTTGAAATTTTATACAT+CGG - chr3_1:53647508-53647527 Msa0362450:intron 25.0%
!! AGAGATGATCTAAAACTTAT+AGG + chr3_1:53647694-53647713 None:intergenic 25.0%
! TCTGTTAACTTTGAACATTA+GGG + chr3_1:53647768-53647787 None:intergenic 25.0%
! TTCTGTTAACTTTGAACATT+AGG + chr3_1:53647769-53647788 None:intergenic 25.0%
! TAATGTTCAAAGTTAACAGA+AGG - chr3_1:53647768-53647787 Msa0362450:CDS 25.0%
! ATCTTGAAATTGTAAAGTGT+CGG + chr3_1:53647804-53647823 None:intergenic 25.0%
!!! AGTTCTTATTTTTTGCGAAT+TGG + chr3_1:53647835-53647854 None:intergenic 25.0%
! ATGAAAAAAACATAGCAAGA+TGG + chr3_1:53647980-53647999 None:intergenic 25.0%
! TGTTTATTCAAACAAGATTC+AGG + chr3_1:53648255-53648274 None:intergenic 25.0%
! ACAAATATGAATTTGATGGA+TGG - chr3_1:53648733-53648752 Msa0362450:CDS 25.0%
! TATCAAGAATAACAAGCAAA+AGG + chr3_1:53648842-53648861 None:intergenic 25.0%
! ACCTTCAAAAACAACAAATA+GGG + chr3_1:53648965-53648984 None:intergenic 25.0%
! CTTGTATAATGTTCAGATTA+AGG + chr3_1:53649014-53649033 None:intergenic 25.0%
!! TCTTTCTACGGATATAATTT+TGG + chr3_1:53649070-53649089 None:intergenic 25.0%
! ATACTGAAGAATTCTTTCTA+CGG + chr3_1:53649082-53649101 None:intergenic 25.0%
!! ATTAGTTTCAGAGAGAAATT+TGG - chr3_1:53649282-53649301 Msa0362450:CDS 25.0%
! ATCATAATTCTTCCAAAAGT+AGG + chr3_1:53649538-53649557 None:intergenic 25.0%
! AACATTAACATATCTTCCAT+TGG - chr3_1:53649562-53649581 Msa0362450:CDS 25.0%
!!! TGTTTTTGATAGTGTTAGAT+CGG + chr3_1:53650048-53650067 None:intergenic 25.0%
!! GCTTAAGAAAAGTAAAGTTT+TGG - chr3_1:53650499-53650518 Msa0362450:CDS 25.0%
!!! AGTTTGCTGTATCAAATTAT+CGG + chr3_1:53650561-53650580 None:intergenic 25.0%
TAAAAAACACTCTCTTCACA+AGG - chr3_1:53644174-53644193 Msa0362450:exon 30.0%
TTGTTTGTGTCTTTCTTGAA+AGG - chr3_1:53644339-53644358 Msa0362450:intron 30.0%
AGCAATAACATGAAACAAAG+AGG + chr3_1:53644433-53644452 None:intergenic 30.0%
GGTAATACAAAAGAAACTAG+AGG - chr3_1:53644620-53644639 Msa0362450:intron 30.0%
AAAATTCCAGCATTAGAGTA+AGG + chr3_1:53644662-53644681 None:intergenic 30.0%
GACAGAAAAGACAGTTTATT+TGG - chr3_1:53644767-53644786 Msa0362450:intron 30.0%
TCAAGCTTATCCTTGAAATA+CGG + chr3_1:53644800-53644819 None:intergenic 30.0%
!!! CAAAGGAGTTTTGAAAATGA+AGG - chr3_1:53644992-53645011 Msa0362450:intron 30.0%
!!! TGAAAATGAAGGCCTTATTT+TGG - chr3_1:53645003-53645022 Msa0362450:intron 30.0%
AAAATGCAGACACCAAAATA+AGG + chr3_1:53645018-53645037 None:intergenic 30.0%
! ATTTTTCGTAGCAAAGATTG+TGG - chr3_1:53645033-53645052 Msa0362450:intron 30.0%
!!! GTTTTCAGGTTACAGAAAAT+TGG - chr3_1:53645079-53645098 Msa0362450:intron 30.0%
TAATTGTTACAAGAAGAGCT+TGG + chr3_1:53645114-53645133 None:intergenic 30.0%
TGCAACTATCATTGTAATGT+TGG - chr3_1:53645339-53645358 Msa0362450:intron 30.0%
!!! ACTTGTTTTGAAACTTCTCT+AGG + chr3_1:53645387-53645406 None:intergenic 30.0%
! GAAGTTTCAAAACAAGTTGA+TGG - chr3_1:53645390-53645409 Msa0362450:CDS 30.0%
!! TTTGGTTCTTGTATGGTTAT+AGG - chr3_1:53645619-53645638 Msa0362450:CDS 30.0%
! TTGGTTCTTGTATGGTTATA+GGG - chr3_1:53645620-53645639 Msa0362450:CDS 30.0%
GTGTCTGGAAGATTATAAAT+AGG + chr3_1:53645706-53645725 None:intergenic 30.0%
ATAGCTATTGAAGTAGTTGA+TGG - chr3_1:53645838-53645857 Msa0362450:intron 30.0%
!! GAGAAGTACCAAAAATTTCA+GGG - chr3_1:53645995-53646014 Msa0362450:CDS 30.0%
! TTCATGATCCCTGAAATTTT+TGG + chr3_1:53646006-53646025 None:intergenic 30.0%
AGATAACATATTGTTTGGGA+TGG - chr3_1:53646086-53646105 Msa0362450:intron 30.0%
! GATCTGGAGATTTTATCATT+TGG - chr3_1:53646162-53646181 Msa0362450:intron 30.0%
TTTGGCGATCAAACAATTAT+TGG - chr3_1:53646180-53646199 Msa0362450:CDS 30.0%
TTGGCGATCAAACAATTATT+GGG - chr3_1:53646181-53646200 Msa0362450:CDS 30.0%
TACAGGATCTCATCTATTTA+AGG - chr3_1:53646320-53646339 Msa0362450:CDS 30.0%
!! TTCTGAAGTGTTAAAGAACT+AGG + chr3_1:53646393-53646412 None:intergenic 30.0%
ATATCTACACTAACCATATG+TGG + chr3_1:53646500-53646519 None:intergenic 30.0%
! CTGCAATGTGATTTTTCTTA+TGG - chr3_1:53646577-53646596 Msa0362450:intron 30.0%
!! AACTTTTTCTCACCAAGATA+AGG + chr3_1:53646701-53646720 None:intergenic 30.0%
TATAATGATCTACTCAACTC+AGG - chr3_1:53646830-53646849 Msa0362450:intron 30.0%
! ACGGATTTTATGGAACTTAT+TGG - chr3_1:53646854-53646873 Msa0362450:intron 30.0%
TAAGATAAGTACATCACAAC+AGG - chr3_1:53646937-53646956 Msa0362450:CDS 30.0%
ATTTCAGCTATTAATACGAG+CGG + chr3_1:53647151-53647170 None:intergenic 30.0%
TTCAAATTGGAAGCAACTAT+TGG - chr3_1:53647185-53647204 Msa0362450:intron 30.0%
! ATGCATTTTGTTGAAGAGTA+GGG + chr3_1:53647362-53647381 None:intergenic 30.0%
AAGTGGAAGAATCCTTAATA+GGG - chr3_1:53647426-53647445 Msa0362450:intron 30.0%
GACCGATGTATAAAATTTCA+AGG + chr3_1:53647513-53647532 None:intergenic 30.0%
! TTTTATACATCGGTCAAAAC+AGG - chr3_1:53647518-53647537 Msa0362450:intron 30.0%
!! TTTAGATCATCTCTGAGATA+AGG - chr3_1:53647700-53647719 Msa0362450:CDS 30.0%
AAGAAACGAAATGAGTGAAT+AGG + chr3_1:53647895-53647914 None:intergenic 30.0%
ACATCACCATTATAATTCCA+AGG + chr3_1:53648117-53648136 None:intergenic 30.0%
! AATTATAATGGTGATGTCTC+AGG - chr3_1:53648120-53648139 Msa0362450:CDS 30.0%
GAACATATCGAAACAGTTTA+TGG + chr3_1:53648446-53648465 None:intergenic 30.0%
ATGAGAAATGCAGTTTAGAT+TGG + chr3_1:53648518-53648537 None:intergenic 30.0%
CAGCAATATTATATACCATC+AGG - chr3_1:53648592-53648611 Msa0362450:intron 30.0%
TGATGTACCTGAAATTGTTT+CGG + chr3_1:53648674-53648693 None:intergenic 30.0%
CAAGCAAAAGGAAAATGTAA+TGG + chr3_1:53648830-53648849 None:intergenic 30.0%
AAAACAACAAATAGGGAGTT+CGG + chr3_1:53648958-53648977 None:intergenic 30.0%
!!! TCCCTATTTGTTGTTTTTGA+AGG - chr3_1:53648961-53648980 Msa0362450:CDS 30.0%
CACCTTCAAAAACAACAAAT+AGG + chr3_1:53648966-53648985 None:intergenic 30.0%
ATCTGAACATTATACAAGCA+TGG - chr3_1:53649016-53649035 Msa0362450:CDS 30.0%
TTATACAAGCATGGATGATA+TGG - chr3_1:53649025-53649044 Msa0362450:CDS 30.0%
TATACAAGCATGGATGATAT+GGG - chr3_1:53649026-53649045 Msa0362450:CDS 30.0%
TGATGAAATGCATATGATGA+AGG - chr3_1:53649375-53649394 Msa0362450:CDS 30.0%
AGTACAGAGATGAACAAATT+TGG - chr3_1:53649677-53649696 Msa0362450:CDS 30.0%
GTACAGAGATGAACAAATTT+GGG - chr3_1:53649678-53649697 Msa0362450:CDS 30.0%
! GTAATTTGTAATCATAAGCC+TGG - chr3_1:53649896-53649915 Msa0362450:CDS 30.0%
TGTCATTCTTTGCAACATTA+AGG + chr3_1:53650114-53650133 None:intergenic 30.0%
CATTACACTACATATGTTCT+TGG - chr3_1:53650375-53650394 Msa0362450:CDS 30.0%
ATTTGATACAGCAAACTCTT+CGG - chr3_1:53650564-53650583 Msa0362450:CDS 30.0%
ATCGTTCTACTACTTAATGA+AGG - chr3_1:53650653-53650672 Msa0362450:CDS 30.0%
!! GCATTCGACTTTATTTCTTT+TGG - chr3_1:53650946-53650965 Msa0362450:CDS 30.0%
TTTGAACGCCAAATCCAAAA+GGG + chr3_1:53644303-53644322 None:intergenic 35.0%
! TTTTGAACGCCAAATCCAAA+AGG + chr3_1:53644304-53644323 None:intergenic 35.0%
GGTTTGAAGAACAATGACAT+TGG + chr3_1:53644395-53644414 None:intergenic 35.0%
TGTCATTGTTCTTCAAACCT+TGG - chr3_1:53644396-53644415 Msa0362450:CDS 35.0%
TTCATGTTATTGCTTTACCG+TGG - chr3_1:53644439-53644458 Msa0362450:CDS 35.0%
TGCTATTCCAATTCAATGCT+TGG - chr3_1:53644487-53644506 Msa0362450:CDS 35.0%
!! TCAGAAACCAAGCATTGAAT+TGG + chr3_1:53644497-53644516 None:intergenic 35.0%
! GATGTTTTCTCTGTTTGTGT+TGG - chr3_1:53644515-53644534 Msa0362450:CDS 35.0%
! CTTCATGAACCTCTTTTGAA+TGG - chr3_1:53644599-53644618 Msa0362450:CDS 35.0%
TCAGCATTCTTACATTCTCT+TGG - chr3_1:53644681-53644700 Msa0362450:intron 35.0%
CAGCATTCTTACATTCTCTT+GGG - chr3_1:53644682-53644701 Msa0362450:intron 35.0%
ATTCTTACATTCTCTTGGGT+TGG - chr3_1:53644686-53644705 Msa0362450:intron 35.0%
GTTGGTCCATTAATTTCTGT+TGG - chr3_1:53644704-53644723 Msa0362450:intron 35.0%
GTATTTCAAGGATAAGCTTG+AGG - chr3_1:53644799-53644818 Msa0362450:intron 35.0%
! TGACTTCACTAGCTTAAATG+TGG + chr3_1:53644855-53644874 None:intergenic 35.0%
CTTTCATGTCAATCCAAACA+AGG - chr3_1:53645154-53645173 Msa0362450:intron 35.0%
GTTATCACTTGCATGATCTT+TGG - chr3_1:53645239-53645258 Msa0362450:intron 35.0%
!!! TCTTTGGTTGGTAGTTTTTC+AGG - chr3_1:53645255-53645274 Msa0362450:intron 35.0%
!! TTCTCTAGGATTGACACTAA+AGG + chr3_1:53645373-53645392 None:intergenic 35.0%
!! CTGAGATTTTAAGGAACATG+AGG - chr3_1:53645443-53645462 Msa0362450:CDS 35.0%
ATGAGGATTCTCAAACTTCA+AGG - chr3_1:53645460-53645479 Msa0362450:CDS 35.0%
GATTCTCAAACTTCAAGGAT+GGG - chr3_1:53645465-53645484 Msa0362450:CDS 35.0%
! TCAGAAAGAGTGAGCAATTT+TGG - chr3_1:53645518-53645537 Msa0362450:CDS 35.0%
!! TTTGTGTCTGTGGTTACTTT+TGG - chr3_1:53645601-53645620 Msa0362450:CDS 35.0%
!!! GGTTACTTTTGGTTCTTGTA+TGG - chr3_1:53645612-53645631 Msa0362450:CDS 35.0%
TGGTTCTTGTATGGTTATAG+GGG - chr3_1:53645621-53645640 Msa0362450:CDS 35.0%
TTCAACGATGTCACAATGTA+AGG - chr3_1:53645729-53645748 Msa0362450:intron 35.0%
AATGTAAGGTTTCTCTTGAC+AGG - chr3_1:53645743-53645762 Msa0362450:intron 35.0%
! GATTGCATCTTTTCTTTGTC+AGG - chr3_1:53645765-53645784 Msa0362450:intron 35.0%
TATTGTTGAGAAGCTTCCAA+AGG - chr3_1:53645804-53645823 Msa0362450:intron 35.0%
ATTGTTGAGAAGCTTCCAAA+GGG - chr3_1:53645805-53645824 Msa0362450:intron 35.0%
!! TAGTTGATGGAAACTTCTCT+TGG - chr3_1:53645851-53645870 Msa0362450:intron 35.0%
!! AGTTGATGGAAACTTCTCTT+GGG - chr3_1:53645852-53645871 Msa0362450:intron 35.0%
!! GGAATGAAAGTTGCTATTTG+TGG - chr3_1:53645928-53645947 Msa0362450:CDS 35.0%
!! GGAGAAGTACCAAAAATTTC+AGG - chr3_1:53645994-53646013 Msa0362450:CDS 35.0%
!! ATCTTGCTACTTTGTATCCA+TGG + chr3_1:53646063-53646082 None:intergenic 35.0%
! CATATTGTTTGGGATGGATA+TGG - chr3_1:53646092-53646111 Msa0362450:intron 35.0%
TGAAGCATGTTCACTAAAGA+AGG - chr3_1:53646140-53646159 Msa0362450:intron 35.0%
ATGTTCACTAAAGAAGGATC+TGG - chr3_1:53646146-53646165 Msa0362450:intron 35.0%
TGGCGATCAAACAATTATTG+GGG - chr3_1:53646182-53646201 Msa0362450:CDS 35.0%
ATCAAACAATTATTGGGGAG+AGG - chr3_1:53646187-53646206 Msa0362450:CDS 35.0%
TCAAACAATTATTGGGGAGA+GGG - chr3_1:53646188-53646207 Msa0362450:CDS 35.0%
GTAATAATTCGAATAACCGG+TGG - chr3_1:53646461-53646480 Msa0362450:intron 35.0%
TGGTTACATTCAATAACCAC+CGG + chr3_1:53646480-53646499 None:intergenic 35.0%
GATGGAGAAATTACTCAATG+TGG - chr3_1:53646803-53646822 Msa0362450:intron 35.0%
! GAGAAGAAAGAAGTACAGAA+TGG - chr3_1:53647001-53647020 Msa0362450:CDS 35.0%
! AAGAAAGAAGTACAGAATGG+TGG - chr3_1:53647004-53647023 Msa0362450:CDS 35.0%
! TCTTGAACAAGTTGTCCTTT+TGG + chr3_1:53647049-53647068 None:intergenic 35.0%
AATTGGAAGCAACTATTGGA+TGG - chr3_1:53647189-53647208 Msa0362450:intron 35.0%
CCAAACATACATAGACAACT+AGG + chr3_1:53647270-53647289 None:intergenic 35.0%
CCTAGTTGTCTATGTATGTT+TGG - chr3_1:53647267-53647286 Msa0362450:intron 35.0%
GACACATAAAGAACTTCCTA+TGG + chr3_1:53647293-53647312 None:intergenic 35.0%
! GATGCATTTTGTTGAAGAGT+AGG + chr3_1:53647363-53647382 None:intergenic 35.0%
GTGGCATCAAAAAATGACAT+TGG + chr3_1:53647403-53647422 None:intergenic 35.0%
CTATTAAGGATTCTTCCACT+TGG + chr3_1:53647427-53647446 None:intergenic 35.0%
CAAGTGGAAGAATCCTTAAT+AGG - chr3_1:53647425-53647444 Msa0362450:intron 35.0%
AGAATCCTTAATAGGGTATG+AGG - chr3_1:53647433-53647452 Msa0362450:intron 35.0%
!! AGGTTCTCATTTTTGCGAAT+TGG - chr3_1:53647538-53647557 Msa0362450:intron 35.0%
!! CTCTGAGATAAGGTTAATAG+AGG - chr3_1:53647710-53647729 Msa0362450:CDS 35.0%
GAACATTAGGGACTATGATT+TGG + chr3_1:53647756-53647775 None:intergenic 35.0%
ATCCACAAAACTGTAAGCAT+CGG + chr3_1:53647865-53647884 None:intergenic 35.0%
!! AAAATGTTTTGTTCTCCTGC+AGG - chr3_1:53648015-53648034 Msa0362450:CDS 35.0%
TACTTGTATCCACTTCACTT+TGG + chr3_1:53648051-53648070 None:intergenic 35.0%
GCACATAATGCAGTTTGAAA+AGG + chr3_1:53648076-53648095 None:intergenic 35.0%
!! AATTCCAAGGAGATGGATTA+TGG + chr3_1:53648104-53648123 None:intergenic 35.0%
CCATTATAATTCCAAGGAGA+TGG + chr3_1:53648111-53648130 None:intergenic 35.0%
CCATCTCCTTGGAATTATAA+TGG - chr3_1:53648108-53648127 Msa0362450:CDS 35.0%
TCTTGTGATGTCATCAACAT+AGG + chr3_1:53648406-53648425 None:intergenic 35.0%
!! ATGTTGATGACATCACAAGA+TGG - chr3_1:53648406-53648425 Msa0362450:CDS 35.0%
TGCATTTCTCATCGTTATTC+AGG - chr3_1:53648526-53648545 Msa0362450:intron 35.0%
! AACAATCAGAAGCTTTGATC+AGG - chr3_1:53648693-53648712 Msa0362450:intron 35.0%
TTCTTGATATCAGTTCCACA+AGG - chr3_1:53648853-53648872 Msa0362450:CDS 35.0%
TCAGGTAAGAAACTCAATTC+TGG - chr3_1:53648886-53648905 Msa0362450:CDS 35.0%
AAACAACAAATAGGGAGTTC+GGG + chr3_1:53648957-53648976 None:intergenic 35.0%
ATATCAACCGTTCCATATGA+TGG + chr3_1:53649165-53649184 None:intergenic 35.0%
! GGTTGATATACAAAACTTGC+AGG - chr3_1:53649176-53649195 Msa0362450:CDS 35.0%
!! CGTTGTTGATTTACAAGACA+AGG - chr3_1:53649242-53649261 Msa0362450:CDS 35.0%
TACGACATAGCTATTATACG+AGG + chr3_1:53649310-53649329 None:intergenic 35.0%
TTTGTTGGAGGAATGAAAAC+TGG - chr3_1:53649448-53649467 Msa0362450:CDS 35.0%
GGAATGAAAACTGGAATTGT+TGG - chr3_1:53649457-53649476 Msa0362450:CDS 35.0%
AAGATTGAGCATTATTCCTC+AGG - chr3_1:53649603-53649622 Msa0362450:CDS 35.0%
ACAGTACCTTCAAACATAGT+TGG + chr3_1:53649631-53649650 None:intergenic 35.0%
!! CTATGTTTGAAGGTACTGTA+AGG - chr3_1:53649632-53649651 Msa0362450:CDS 35.0%
! AGGTACTGTAAGGAGTAATT+TGG - chr3_1:53649642-53649661 Msa0362450:CDS 35.0%
ACACAGTATACTCTATCTGT+TGG - chr3_1:53649821-53649840 Msa0362450:CDS 35.0%
CACAGTATACTCTATCTGTT+GGG - chr3_1:53649822-53649841 Msa0362450:CDS 35.0%
TATCTGTTGGGTATGATTCA+TGG - chr3_1:53649834-53649853 Msa0362450:CDS 35.0%
AACACACAAGATTTGATCAG+AGG + chr3_1:53649980-53649999 None:intergenic 35.0%
AAAGGTTTGTAACTACGATC+TGG + chr3_1:53650196-53650215 None:intergenic 35.0%
! ACTCACTGCAACATACATTT+TGG + chr3_1:53650420-53650439 None:intergenic 35.0%
AATGGTGAGAATTGGAGTAT+GGG - chr3_1:53650443-53650462 Msa0362450:CDS 35.0%
ATTTCATTGGACACTAATGC+AGG - chr3_1:53650747-53650766 Msa0362450:CDS 35.0%
TGTTCTCTAGCAATCTTGTT+GGG + chr3_1:53650794-53650813 None:intergenic 35.0%
TTGTTCTCTAGCAATCTTGT+TGG + chr3_1:53650795-53650814 None:intergenic 35.0%
CTATTATTGTGGACGAAAAC+TGG + chr3_1:53650868-53650887 None:intergenic 35.0%
! GTGAAACCAGTTTTCTTGCA+TGG - chr3_1:53644047-53644066 Msa0362450:three_prime_UTR 40.0%
GAAAAGCCATGCAAGAAAAC+TGG + chr3_1:53644056-53644075 None:intergenic 40.0%
! GTTTTCTTGCATGGCTTTTC+TGG - chr3_1:53644056-53644075 Msa0362450:three_prime_UTR 40.0%
!! AGACTAAAAGTGCCACTAAC+AGG + chr3_1:53644097-53644116 None:intergenic 40.0%
! TAGTGGCACTTTTAGTCTCA+TGG - chr3_1:53644099-53644118 Msa0362450:three_prime_UTR 40.0%
! TGAAAAGCTTGTGACCCTTT+TGG - chr3_1:53644286-53644305 Msa0362450:intron 40.0%
TGGCGTTCAAAACAGTTTCT+TGG - chr3_1:53644312-53644331 Msa0362450:intron 40.0%
GGCGTTCAAAACAGTTTCTT+GGG - chr3_1:53644313-53644332 Msa0362450:intron 40.0%
GCGTTCAAAACAGTTTCTTG+GGG - chr3_1:53644314-53644333 Msa0362450:intron 40.0%
AAGAGGTAAAAGACACACCA+AGG + chr3_1:53644416-53644435 None:intergenic 40.0%
TACGTAGAGAACAATCTCCA+CGG + chr3_1:53644459-53644478 None:intergenic 40.0%
GTTACTCCTTACTCTAATGC+TGG - chr3_1:53644653-53644672 Msa0362450:intron 40.0%
! TGGAGCTTTTCCGTATTTCA+AGG - chr3_1:53644787-53644806 Msa0362450:intron 40.0%
GATAAGCTTGAGGCATATTG+TGG - chr3_1:53644809-53644828 Msa0362450:intron 40.0%
AGTCATTAGCATTCTCAGCT+CGG - chr3_1:53644870-53644889 Msa0362450:intron 40.0%
!! TAACACATTGGCTTCTTACG+TGG - chr3_1:53644928-53644947 Msa0362450:intron 40.0%
!! AACACATTGGCTTCTTACGT+GGG - chr3_1:53644929-53644948 Msa0362450:intron 40.0%
! TTGTGGAGTGTCTTACAAAG+AGG - chr3_1:53645050-53645069 Msa0362450:intron 40.0%
AGTGTCTTACAAAGAGGCAA+TGG - chr3_1:53645056-53645075 Msa0362450:intron 40.0%
GTGTCTTACAAAGAGGCAAT+GGG - chr3_1:53645057-53645076 Msa0362450:intron 40.0%
ACTGTTGATGCTGAAAGAGT+TGG - chr3_1:53645208-53645227 Msa0362450:intron 40.0%
TCACTTGCATGATCTTTGGT+TGG - chr3_1:53645243-53645262 Msa0362450:intron 40.0%
AATGATAGTTGCAACAAGCC+CGG + chr3_1:53645332-53645351 None:intergenic 40.0%
GTTCCTTAAAATCTCAGACG+TGG + chr3_1:53645440-53645459 None:intergenic 40.0%
GGATTCTCAAACTTCAAGGA+TGG - chr3_1:53645464-53645483 Msa0362450:CDS 40.0%
AGATCTTCCCTGATTCAAGT+GGG + chr3_1:53645648-53645667 None:intergenic 40.0%
AAGATCTTCCCTGATTCAAG+TGG + chr3_1:53645649-53645668 None:intergenic 40.0%
GACATCGTTGAAATTGTGTC+TGG + chr3_1:53645721-53645740 None:intergenic 40.0%
GCTATATGTGAACTTCCCTT+TGG + chr3_1:53645823-53645842 None:intergenic 40.0%
TATTTGTGGTACCGTTGGAT+CGG - chr3_1:53645942-53645961 Msa0362450:CDS 40.0%
! AGTAGATTTTCCCGATCCAA+CGG + chr3_1:53645956-53645975 None:intergenic 40.0%
CATGAAGTTGTGTGGAACAA+AGG - chr3_1:53646020-53646039 Msa0362450:CDS 40.0%
! TGTTTGGGATGGATATGGAA+AGG - chr3_1:53646097-53646116 Msa0362450:intron 40.0%
! GTTTGGGATGGATATGGAAA+GGG - chr3_1:53646098-53646117 Msa0362450:intron 40.0%
CAAACAATTATTGGGGAGAG+GGG - chr3_1:53646189-53646208 Msa0362450:CDS 40.0%
GAGAGGGGAATAAATTTGAG+TGG - chr3_1:53646204-53646223 Msa0362450:CDS 40.0%
AGGGGAATAAATTTGAGTGG+TGG - chr3_1:53646207-53646226 Msa0362450:CDS 40.0%
!! TGAGCATCAAGAGCACTAAA+AGG + chr3_1:53646300-53646319 None:intergenic 40.0%
AGTGTAGATATTGACACACG+TGG - chr3_1:53646509-53646528 Msa0362450:intron 40.0%
! GCACTGACACTTCATATTGA+AGG + chr3_1:53646547-53646566 None:intergenic 40.0%
TATGGCACGATCCTTGTATA+TGG - chr3_1:53646595-53646614 Msa0362450:intron 40.0%
AAGCATTCCTGCCATATACA+AGG + chr3_1:53646609-53646628 None:intergenic 40.0%
TCTGCACTTGATTCATCAGA+TGG - chr3_1:53646896-53646915 Msa0362450:CDS 40.0%
CTTGATTCATCAGATGGAGA+TGG - chr3_1:53646902-53646921 Msa0362450:CDS 40.0%
! TCAATTTTGTCGACACCAAG+AGG + chr3_1:53646980-53646999 None:intergenic 40.0%
AATGGCAAGTTTGAGCCAAA+AGG - chr3_1:53647031-53647050 Msa0362450:intron 40.0%
CAAGAAGAAGAAAGAGAGCA+AGG - chr3_1:53647064-53647083 Msa0362450:intron 40.0%
AAAGAGAGCAAGGTGAAGTT+GGG - chr3_1:53647074-53647093 Msa0362450:intron 40.0%
! AAGTTGGGTTTTCAGTGTAC+TGG - chr3_1:53647089-53647108 Msa0362450:intron 40.0%
AACTACATCACGACAGCATA+TGG - chr3_1:53647112-53647131 Msa0362450:intron 40.0%
!!! GGCTCAACATCTTTTGAGAT+GGG + chr3_1:53647226-53647245 None:intergenic 40.0%
!! TGGCTCAACATCTTTTGAGA+TGG + chr3_1:53647227-53647246 None:intergenic 40.0%
GTCTATGTATGTTTGGCCAT+AGG - chr3_1:53647274-53647293 Msa0362450:intron 40.0%
!!! TTTTTTGATGCCACTCCAAG+TGG - chr3_1:53647409-53647428 Msa0362450:intron 40.0%
TAACACGGAAATTCATGGAG+GGG + chr3_1:53647605-53647624 None:intergenic 40.0%
CTAACACGGAAATTCATGGA+GGG + chr3_1:53647606-53647625 None:intergenic 40.0%
TCTAACACGGAAATTCATGG+AGG + chr3_1:53647607-53647626 None:intergenic 40.0%
TCCATGAATTTCCGTGTTAG+AGG - chr3_1:53647606-53647625 Msa0362450:intron 40.0%
AATTTCCGTGTTAGAGGCTA+TGG - chr3_1:53647612-53647631 Msa0362450:intron 40.0%
TTGTGAGCACACATTGATGT+GGG + chr3_1:53647659-53647678 None:intergenic 40.0%
! TACCGATGCTTACAGTTTTG+TGG - chr3_1:53647860-53647879 Msa0362450:CDS 40.0%
AACATAGGAGAAAGCTCTCA+AGG + chr3_1:53648391-53648410 None:intergenic 40.0%
ACATCACAAGATGGAGCTTA+TGG - chr3_1:53648415-53648434 Msa0362450:CDS 40.0%
CGACTAAACGAGATAGTTCA+CGG + chr3_1:53648618-53648637 None:intergenic 40.0%
CGTGAACTATCTCGTTTAGT+CGG - chr3_1:53648616-53648635 Msa0362450:intron 40.0%
CCTGAATTTATGACTCCTTG+TGG + chr3_1:53648871-53648890 None:intergenic 40.0%
CCACAAGGAGTCATAAATTC+AGG - chr3_1:53648868-53648887 Msa0362450:CDS 40.0%
!!! GTTGTTTTTGAAGGTGTTGC+TGG - chr3_1:53648970-53648989 Msa0362450:CDS 40.0%
! TTTTCCTCTACAACGAGAGA+AGG + chr3_1:53649123-53649142 None:intergenic 40.0%
TATGATGGCCAAGAATCATG+TGG + chr3_1:53649150-53649169 None:intergenic 40.0%
CATGATTCTTGGCCATCATA+TGG - chr3_1:53649150-53649169 Msa0362450:CDS 40.0%
TTCTTGGCCATCATATGGAA+CGG - chr3_1:53649155-53649174 Msa0362450:CDS 40.0%
CTCCAACAAATGTGCATGTA+AGG + chr3_1:53649438-53649457 None:intergenic 40.0%
! CTTACATGCACATTTGTTGG+AGG - chr3_1:53649436-53649455 Msa0362450:CDS 40.0%
ACTGGAATTGTTGGAAGAAC+AGG - chr3_1:53649466-53649485 Msa0362450:CDS 40.0%
ATTGTTGGAAGAACAGGAAG+TGG - chr3_1:53649472-53649491 Msa0362450:CDS 40.0%
CAAAAGTAGGCTCAACGATT+CGG + chr3_1:53649525-53649544 None:intergenic 40.0%
CCTCAAATCATGAAGTCCAA+TGG + chr3_1:53649581-53649600 None:intergenic 40.0%
CCATTGGACTTCATGATTTG+AGG - chr3_1:53649578-53649597 Msa0362450:CDS 40.0%
TCAAACATAGTTGGATCCTG+AGG + chr3_1:53649622-53649641 None:intergenic 40.0%
CAGGATCCAACTATGTTTGA+AGG - chr3_1:53649622-53649641 Msa0362450:CDS 40.0%
TCATCTCTGTACTCTTCTAG+TGG + chr3_1:53649670-53649689 None:intergenic 40.0%
CAGAGATGAACAAATTTGGG+AGG - chr3_1:53649681-53649700 Msa0362450:CDS 40.0%
AGATGAACAAATTTGGGAGG+TGG - chr3_1:53649684-53649703 Msa0362450:CDS 40.0%
GATGAACAAATTTGGGAGGT+GGG - chr3_1:53649685-53649704 Msa0362450:CDS 40.0%
AATAATCGTAGCCACTCTCT+AGG - chr3_1:53649929-53649948 Msa0362450:CDS 40.0%
AATTGATATAGCCTCAACCG+TGG - chr3_1:53650143-53650162 Msa0362450:CDS 40.0%
ATTGATATAGCCTCAACCGT+GGG - chr3_1:53650144-53650163 Msa0362450:CDS 40.0%
!!! CAAGGTCTGTTATTTTCCCA+CGG + chr3_1:53650163-53650182 None:intergenic 40.0%
GTTTGTAACTACGATCTGGA+TGG + chr3_1:53650192-53650211 None:intergenic 40.0%
AACTTGGAGACGAAGTTAGA+AGG - chr3_1:53650296-53650315 Msa0362450:CDS 40.0%
GACGAAGTTAGAAGGAAAGA+AGG - chr3_1:53650304-53650323 Msa0362450:CDS 40.0%
GAAGGAAAATTAGACTCAGC+AGG - chr3_1:53650322-53650341 Msa0362450:CDS 40.0%
AGGTTTGTCTCTTAAGGCTA+AGG - chr3_1:53650342-53650361 Msa0362450:CDS 40.0%
TATGTTGCAGTGAGTGAGAA+TGG - chr3_1:53650425-53650444 Msa0362450:CDS 40.0%
TGAGTGAGAATGGTGAGAAT+TGG - chr3_1:53650435-53650454 Msa0362450:CDS 40.0%
GAATGGTGAGAATTGGAGTA+TGG - chr3_1:53650442-53650461 Msa0362450:CDS 40.0%
CACTAATGCAGGACTAATTG+AGG - chr3_1:53650758-53650777 Msa0362450:CDS 40.0%
GTTCTCTAGCAATCTTGTTG+GGG + chr3_1:53650793-53650812 None:intergenic 40.0%
AAAACTGGAGTTCGATCTAG+TGG + chr3_1:53650853-53650872 None:intergenic 40.0%
TCTCCATCTACTCCTGTTAG+TGG - chr3_1:53644082-53644101 Msa0362450:three_prime_UTR 45.0%
TCTCTCTTTGCTACTGTCTC+TGG + chr3_1:53644153-53644172 None:intergenic 45.0%
! GCTTGTGACCCTTTTGGATT+TGG - chr3_1:53644292-53644311 Msa0362450:intron 45.0%
!! CTGTCTTTTCTGTCGAGTTG+TGG + chr3_1:53644761-53644780 None:intergenic 45.0%
!! CAAAGAGGCAATGGGTTTTC+AGG - chr3_1:53645065-53645084 Msa0362450:intron 45.0%
CTTGGCATCGCTTCAATTTC+CGG - chr3_1:53645310-53645329 Msa0362450:intron 45.0%
TTGGCATCGCTTCAATTTCC+GGG - chr3_1:53645311-53645330 Msa0362450:intron 45.0%
!! AGGCCACGTCTGAGATTTTA+AGG - chr3_1:53645434-53645453 Msa0362450:CDS 45.0%
GTAACCACAGACACAAATGC+TGG + chr3_1:53645598-53645617 None:intergenic 45.0%
!! GTTGCTATTTGTGGTACCGT+TGG - chr3_1:53645937-53645956 Msa0362450:CDS 45.0%
ATTTGTGGTACCGTTGGATC+GGG - chr3_1:53645943-53645962 Msa0362450:CDS 45.0%
TCAGGGATCATGAAGTTGTG+TGG - chr3_1:53646012-53646031 Msa0362450:CDS 45.0%
CTTATGTAGCACAGTCACCA+TGG - chr3_1:53646043-53646062 Msa0362450:CDS 45.0%
AGTGCTCTTGATGCTCATAC+AGG - chr3_1:53646303-53646322 Msa0362450:CDS 45.0%
ACGACACACTGACACAAACA+AGG - chr3_1:53646415-53646434 Msa0362450:CDS 45.0%
CGACACACTGACACAAACAA+GGG - chr3_1:53646416-53646435 Msa0362450:CDS 45.0%
! CTTCATATTGAAGGCGTGTC+TGG + chr3_1:53646538-53646557 None:intergenic 45.0%
TGATCTACTCAACTCAGGCA+CGG - chr3_1:53646835-53646854 Msa0362450:intron 45.0%
! CAACTCAGGCACGGATTTTA+TGG - chr3_1:53646844-53646863 Msa0362450:intron 45.0%
CTATGTGTCTCTCTTCCTCT+TGG - chr3_1:53646962-53646981 Msa0362450:CDS 45.0%
! GTACAGAATGGTGGAACGAA+TGG - chr3_1:53647013-53647032 Msa0362450:intron 45.0%
GAAAGAGAGCAAGGTGAAGT+TGG - chr3_1:53647073-53647092 Msa0362450:intron 45.0%
TACATCACGACAGCATATGG+AGG - chr3_1:53647115-53647134 Msa0362450:intron 45.0%
AAAGATGTTGAGCCACCTGT+TGG - chr3_1:53647232-53647251 Msa0362450:intron 45.0%
! CAACAAGTGTTGCTCGAGAT+AGG + chr3_1:53647315-53647334 None:intergenic 45.0%
GGTAGCTGTCTTATATCCAG+CGG + chr3_1:53647341-53647360 None:intergenic 45.0%
AAGGATTCTTCCACTTGGAG+TGG + chr3_1:53647422-53647441 None:intergenic 45.0%
CAGCTCCTCATACCCTATTA+AGG + chr3_1:53647441-53647460 None:intergenic 45.0%
GCCTCTAACACGGAAATTCA+TGG + chr3_1:53647610-53647629 None:intergenic 45.0%
ACATGCCATAGCCTCTAACA+CGG + chr3_1:53647620-53647639 None:intergenic 45.0%
CTTGTGAGCACACATTGATG+TGG + chr3_1:53647660-53647679 None:intergenic 45.0%
TGCTCCATAATCCATCTCCT+TGG - chr3_1:53648097-53648116 Msa0362450:CDS 45.0%
! CAGATGCTGATTGCTGTCAT+AGG + chr3_1:53648175-53648194 None:intergenic 45.0%
CTATGACAGCAATCAGCATC+TGG - chr3_1:53648173-53648192 Msa0362450:CDS 45.0%
AGCAATCAGCATCTGGTATC+AGG - chr3_1:53648180-53648199 Msa0362450:CDS 45.0%
GTGTTGAATGACAGGAGCTT+TGG + chr3_1:53648647-53648666 None:intergenic 45.0%
CACTTCGCCGAAACAATTTC+AGG - chr3_1:53648664-53648683 Msa0362450:intron 45.0%
! GCTGGTTTAGCTGTGACATA+TGG - chr3_1:53648988-53649007 Msa0362450:CDS 45.0%
CTCTCGTTGTAGAGGAAAAC+CGG - chr3_1:53649124-53649143 Msa0362450:CDS 45.0%
AAAACCGGCCACATGATTCT+TGG - chr3_1:53649139-53649158 Msa0362450:CDS 45.0%
TGCAACACAAGTGGCATATG+TGG + chr3_1:53649412-53649431 None:intergenic 45.0%
! CATATGCCACTTGTGTTGCA+TGG - chr3_1:53649412-53649431 Msa0362450:CDS 45.0%
GGCCTTACATGCACATTTGT+TGG - chr3_1:53649433-53649452 Msa0362450:CDS 45.0%
! CGAATCGTTGAGCCTACTTT+TGG - chr3_1:53649523-53649542 Msa0362450:CDS 45.0%
TAGTGTTAGATCGGCAATCC+TGG + chr3_1:53650039-53650058 None:intergenic 45.0%
!!! CTGTTATTTTCCCACGGTTG+AGG + chr3_1:53650157-53650176 None:intergenic 45.0%
CGATCTGGATGGCAAAATCA+AGG + chr3_1:53650181-53650200 None:intergenic 45.0%
GCACTAGACAAGTGTCAACT+TGG - chr3_1:53650280-53650299 Msa0362450:CDS 45.0%
CTCAGCAGGTTTGTCTCTTA+AGG - chr3_1:53650336-53650355 Msa0362450:CDS 45.0%
AGAATTGGAGTATGGGTCAG+AGG - chr3_1:53650450-53650469 Msa0362450:CDS 45.0%
!! GCAGTTGGTTTGTCTAGGTA+GGG - chr3_1:53650472-53650491 Msa0362450:CDS 45.0%
! GTGCCACTAACAGGAGTAGA+TGG + chr3_1:53644088-53644107 None:intergenic 50.0%
CGAGTTGTGGAACGTCTTCA+AGG + chr3_1:53644748-53644767 None:intergenic 50.0%
TCCAAACAAGGCCACACTAG+CGG - chr3_1:53645166-53645185 Msa0362450:intron 50.0%
TGATTATCTCGCCGCTAGTG+TGG + chr3_1:53645180-53645199 None:intergenic 50.0%
TGCACCAGCATTTGTGTCTG+TGG - chr3_1:53645591-53645610 Msa0362450:CDS 50.0%
ATAGGGGTCCCACTTGAATC+AGG - chr3_1:53645637-53645656 Msa0362450:CDS 50.0%
TAGGGGTCCCACTTGAATCA+GGG - chr3_1:53645638-53645657 Msa0362450:CDS 50.0%
! CACAAACAAGGGCATGACAC+TGG - chr3_1:53646427-53646446 Msa0362450:CDS 50.0%
GCACGATCCTTGTATATGGC+AGG - chr3_1:53646599-53646618 Msa0362450:intron 50.0%
ACCTGCTGCTGACCTTATCT+TGG - chr3_1:53646686-53646705 Msa0362450:intron 50.0%
ACCAAGATAAGGTCAGCAGC+AGG + chr3_1:53646690-53646709 None:intergenic 50.0%
AGTGTAGTTCCTCCAACAGG+TGG + chr3_1:53647247-53647266 None:intergenic 50.0%
! AGGAGTGTAGTTCCTCCAAC+AGG + chr3_1:53647250-53647269 None:intergenic 50.0%
! TGGTGATGTCTCAGGTTGCA+TGG - chr3_1:53648128-53648147 Msa0362450:CDS 50.0%
!! TCGGCGAAGTGTTGAATGAC+AGG + chr3_1:53648655-53648674 None:intergenic 50.0%
CGCCCCAAGTTCAATATTGC+CGG - chr3_1:53648763-53648782 Msa0362450:CDS 50.0%
GCCCCAAGTTCAATATTGCC+GGG - chr3_1:53648764-53648783 Msa0362450:CDS 50.0%
CCCCGGCAATATTGAACTTG+GGG + chr3_1:53648768-53648787 None:intergenic 50.0%
CCCCAAGTTCAATATTGCCG+GGG - chr3_1:53648765-53648784 Msa0362450:CDS 50.0%
GCCCCGGCAATATTGAACTT+GGG + chr3_1:53648769-53648788 None:intergenic 50.0%
AGCCCCGGCAATATTGAACT+TGG + chr3_1:53648770-53648789 None:intergenic 50.0%
GTTCAATATTGCCGGGGCTA+TGG - chr3_1:53648771-53648790 Msa0362450:CDS 50.0%
ATATTGCCGGGGCTATGGAA+TGG - chr3_1:53648776-53648795 Msa0362450:CDS 50.0%
AGACAACCATTCCATAGCCC+CGG + chr3_1:53648785-53648804 None:intergenic 50.0%
ATGGCCAAGAATCATGTGGC+CGG + chr3_1:53649146-53649165 None:intergenic 50.0%
GTAAGGCCATGCAACACAAG+TGG + chr3_1:53649421-53649440 None:intergenic 50.0%
AATCGTAGCCACTCTCTAGG+CGG - chr3_1:53649932-53649951 Msa0362450:CDS 50.0%
!! CAGAGGCAGTTGGTTTGTCT+AGG - chr3_1:53650467-53650486 Msa0362450:CDS 50.0%
!! GGCAGTTGGTTTGTCTAGGT+AGG - chr3_1:53650471-53650490 Msa0362450:CDS 50.0%
AGCCACTGCATCAGTTGACA+CGG - chr3_1:53650532-53650551 Msa0362450:CDS 50.0%
GATGTTGAGCCACCTGTTGG+AGG - chr3_1:53647235-53647254 Msa0362450:intron 55.0%
!! GCAACACTTGTTGTCACCGC+TGG - chr3_1:53647322-53647341 Msa0362450:intron 55.0%
! GATGTCTCAGGTTGCATGGC+AGG - chr3_1:53648132-53648151 Msa0362450:CDS 55.0%
CGAGATAGTTCACGGCCTGA+TGG + chr3_1:53648610-53648629 None:intergenic 55.0%
ACAACGAGAGAAGGCTCGCT+AGG + chr3_1:53649114-53649133 None:intergenic 55.0%
CGAGCCTTCTCTCGTTGTAG+AGG - chr3_1:53649116-53649135 Msa0362450:CDS 55.0%
GAGTATGGGTCAGAGGCAGT+TGG - chr3_1:53650457-53650476 Msa0362450:CDS 55.0%
AGCCGTGTCAACTGATGCAG+TGG + chr3_1:53650537-53650556 None:intergenic 55.0%
!! GCCGCTAGTGTGGCCTTGTT+TGG + chr3_1:53645170-53645189 None:intergenic 60.0%
! GGCGGAGGCGCATACATAGT+TGG - chr3_1:53649950-53649969 Msa0362450:CDS 60.0%
CGTAGCCACTCTCTAGGCGG+AGG - chr3_1:53649935-53649954 Msa0362450:CDS 65.0%
ATGCGCCTCCGCCTAGAGAG+TGG + chr3_1:53649943-53649962 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 53644041 53651023 53644041 ID=Msa0362450;Name=Msa0362450
chr3_1 mRNA 53644041 53651023 53644041 ID=Msa0362450-mRNA-1;Parent=Msa0362450;Name=Msa0362450-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.88|0.7|1|1|1|10|139|1480
chr3_1 exon 53644041 53644295 53644041 ID=Msa0362450-mRNA-1:exon:9732;Parent=Msa0362450-mRNA-1
chr3_1 exon 53644390 53644629 53644390 ID=Msa0362450-mRNA-1:exon:9731;Parent=Msa0362450-mRNA-1
chr3_1 exon 53644721 53644784 53644721 ID=Msa0362450-mRNA-1:exon:9730;Parent=Msa0362450-mRNA-1
chr3_1 exon 53645362 53645667 53645362 ID=Msa0362450-mRNA-1:exon:9729;Parent=Msa0362450-mRNA-1
chr3_1 exon 53645867 53646081 53645867 ID=Msa0362450-mRNA-1:exon:9728;Parent=Msa0362450-mRNA-1
chr3_1 exon 53646175 53646469 53646175 ID=Msa0362450-mRNA-1:exon:9727;Parent=Msa0362450-mRNA-1
chr3_1 exon 53646863 53647027 53646863 ID=Msa0362450-mRNA-1:exon:9726;Parent=Msa0362450-mRNA-1
chr3_1 exon 53647617 53648270 53647617 ID=Msa0362450-mRNA-1:exon:9725;Parent=Msa0362450-mRNA-1
chr3_1 exon 53648357 53648443 53648357 ID=Msa0362450-mRNA-1:exon:9724;Parent=Msa0362450-mRNA-1
chr3_1 exon 53648723 53651023 53648723 ID=Msa0362450-mRNA-1:exon:9723;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53648723 53651023 53648723 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53648357 53648443 53648357 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53647617 53648270 53647617 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53646863 53647027 53646863 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53646175 53646469 53646175 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53645867 53646081 53645867 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53645362 53645667 53645362 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53644721 53644784 53644721 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53644390 53644629 53644390 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 CDS 53644180 53644295 53644180 ID=Msa0362450-mRNA-1:cds;Parent=Msa0362450-mRNA-1
chr3_1 three_prime_UTR 53644041 53644179 53644041 ID=Msa0362450-mRNA-1:three_prime_utr;Parent=Msa0362450-mRNA-1
Gene Sequence

>Msa0362450

ATGAGTGTGAAACCAGTTTTCTTGCATGGCTTTTCTGGTTTTCTCCATCTACTCCTGTTAGTGGCACTTTTAGTCTCATGGTTGTGTAAGAAAGTCAGTAACATTGAATCCAGAGACAGTAGCAAAGAGAGAATAAAAAACACTCTCTTCACAAGGACTCTTTATTGTTCTATTAGTATTTCAGTTTTCAATCTTCTTCTCTTTTTGTTTGATTACTTCAGTTGGCATAGAAATGATTTTTCAAGTGAAAAGCTTGTGACCCTTTTGGATTTGGCGTTCAAAACAGTTTCTTGGGGAGTTGTTTGTGTCTTTCTTGAAAGGAGACTCTTATATTCATGTGAAACAAAATTTCCAATGTCATTGTTCTTCAAACCTTGGTGTGTCTTTTACCTCTTTGTTTCATGTTATTGCTTTACCGTGGAGATTGTTCTCTACGTAAAACGAGCTGCTATTCCAATTCAATGCTTGGTTTCTGATGTTTTCTCTGTTTGTGTTGGTTTATTTATTTGCTACATGTGTTTTTTTATGAAAAATGAGGGTGAAATAGAAGATAGATCTCTTCATGAACCTCTTTTGAATGGTAATACAAAAGAAACTAGAGGGTTTGACACAGTTACTCCTTACTCTAATGCTGGAATTTTCAGCATTCTTACATTCTCTTGGGTTGGTCCATTAATTTCTGTTGGAAAGAAGAAAACTTTAAACCTTGAAGACGTTCCACAACTCGACAGAAAAGACAGTTTATTTGGAGCTTTTCCGTATTTCAAGGATAAGCTTGAGGCATATTGTGGTGACAACATCAACAAAGTGACCACATTTAAGCTAGTGAAGTCATTAGCATTCTCAGCTCGGAAAGAGATTCTTTTAACAGCTATTTTTGCATTTGTTAACACATTGGCTTCTTACGTGGGTCCGTATCTTATAGATAATTTTGTTCAATATCTTAATGGACAAAGGAGTTTTGAAAATGAAGGCCTTATTTTGGTGTCTGCATTTTTCGTAGCAAAGATTGTGGAGTGTCTTACAAAGAGGCAATGGGTTTTCAGGTTACAGAAAATTGGAATAAGAATCCAAGCTCTTCTTGTAACAATTATTTATAATAAGACTTTGACACTTTCATGTCAATCCAAACAAGGCCACACTAGCGGCGAGATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGCGAATTCAGTTATCACTTGCATGATCTTTGGTTGGTAGTTTTTCAGGTTTTAGTAGCTATGTTTGTTTTGTATAAAAATCTTGGCATCGCTTCAATTTCCGGGCTTGTTGCAACTATCATTGTAATGTTGGCAAATGTTCCTTTAGTGTCAATCCTAGAGAAGTTTCAAAACAAGTTGATGGTATCAAGAGATAAAAGAATGAAGGCCACGTCTGAGATTTTAAGGAACATGAGGATTCTCAAACTTCAAGGATGGGAAATGAAGTTTCTGTCTAAGATAACTGAACTCAGAAAGAGTGAGCAATTTTGGTTAAAGAAATTTTTACACACTATAGCTGTGATCATATTTGTATTTTGGAGTGCACCAGCATTTGTGTCTGTGGTTACTTTTGGTTCTTGTATGGTTATAGGGGTCCCACTTGAATCAGGGAAGATCTTATCTTCACTTGCAACATTTCAGATTCTGCAAGAACCTATTTATAATCTTCCAGACACAATTTCAACGATGTCACAATGTAAGGTTTCTCTTGACAGGATTGCATCTTTTCTTTGTCAGGATGAAATGCGATCTGATATTGTTGAGAAGCTTCCAAAGGGAAGTTCACATATAGCTATTGAAGTAGTTGATGGAAACTTCTCTTGGGATTTATCTTCTCCGAATGCAGTATTGAAAAACATAAATCTTAAAGTTTTTCATGGAATGAAAGTTGCTATTTGTGGTACCGTTGGATCGGGAAAATCTACTTTACTTTCAAGTGTATTAGGAGAAGTACCAAAAATTTCAGGGATCATGAAGTTGTGTGGAACAAAGGCTTATGTAGCACAGTCACCATGGATACAAAGTAGCAAGATAGAAGATAACATATTGTTTGGGATGGATATGGAAAGGGAAAGATATGAGAACGTTCTTGAAGCATGTTCACTAAAGAAGGATCTGGAGATTTTATCATTTGGCGATCAAACAATTATTGGGGAGAGGGGAATAAATTTGAGTGGTGGACAGAAACAAAGAGTACAAATTGCTCGTGCTTTATATCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCTCTTGATGCTCATACAGGATCTCATCTATTTAAGGAATGCTTGCTGAAACTTTTAAGTTCAAAGACAGTGATTTATGTCACACATCAAGTAGAGTTCTTACCTGCTGCTGACCTTATCTTGGTTATGAAAGATGGAGAAATTACTCAATGTGGAAAGTATAATGATCTACTCAACTCAGGCACGGATTTTATGGAACTTATTGGTGCTCATAGAGACGCATTGTCTGCACTTGATTCATCAGATGGAGATGGTACAGTATCTGATAAGATAAGTACATCACAACAGGATCTATGTGTCTCTCTTCCTCTTGGTGTCGACAAAATTGAAGAGAAGAAAGAAGTACAGAATGGTGGAACGAATGGCAAGTTTGAGCCAAAAGGACAACTTGTTCAAGAAGAAGAAAGAGAGCAAGGTGAAGTTGGGTTTTCAGTGTACTGGAACTACATCACGACAGCATATGGAGGTGCTCTTGTGCCGCTCGTATTAATAGCTGAAATCTTGTTTCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCTTCTTCAACTCCCATCTCAAAAGATGTTGAGCCACCTGTTGGAGGAACTACACTCCTAGTTGTCTATGTATGTTTGGCCATAGGAAGTTCTTTATGTGTCCTATCTCGAGCAACACTTGTTGTCACCGCTGGATATAAGACAGCTACCCTACTCTTCAACAAAATGCATCTCTGTATTTTTCGCGCTCCAATGTCATTTTTTGATGCCACTCCAAGTGGAAGAATCCTTAATAGGGCTTCTACTGACCAAAGTGAAGTGGATACAAGTATTCCTTTTCAAACTGCATTATGTGCTTGCTCCATAATCCATCTCCTTGGAATTATAATGGTGATGTCTCAGGTTGCATGGCAGGTTTTCATTGTCTTTATTCCTATGACAGCAATCAGCATCTGGTATCAGCAATATTATATACCATCAGGCCGTGAACTATCTCGTTTAGTCGGAGTATCCAAAGCTCCTGTCATTCAACACTTCGCCGAAACAATTTCAGGTACATCAACAATCAGAAGCTTTGATCAGGTGTCAAGATTCCAACAAACAAATATGAATTTGATGGATGGATATTCACGCCCCAAGTTCAATATTGCCGGGGCTATGGAATGGTTGTCTTTTCGCTTAGATATGTTGTCTTCCATTACATTTTCCTTTTGCTTGTTATTCTTGATATCAGTTCCACAAGGAGTCATAAATTCAGGTGTTGCTGGTTTAGCTGTGACATATGGCCTTAATCTGAACATTATACAAGCATGGATGATATGGGAACTTAGCAACTTAGAGACCAAAATTATATCCGTAGAAAGAATTCTTCAGTATACTTCTATTCCTAGCGAGCCTTCTCTCGTTGTAGAGGAAAACCGGCCACATGATTCTTGGCCATCATATGGAACGGTTGATATACAAAACTTGCAGGTGCGTTATGCTCCACATATGCCACTTGTGTTGCATGGCCTTACATGCACATTTGTTGGAGGAATGAAAACTGGAATTGTTGGAAGAACAGGAAGTGGTAAATCAACTCTCATACAAGCACTTTTCCGAATCGTTGAGCCTACTTTTGGAAGAATTATGATTGACAACATTAACATATCTTCCATTGGACTTCATGATTTGAGGTCAAGATTGAGCATTATTCCTCAGGATCCAACTATGTTTGAAGGTACTGTAAGGAGTAATTTGGATCCACTAGAAGAGTACAGAGATGAACAAATTTGGGAGGCACTAGACAAGTGTCAACTTGGAGACGAAGTTAGAAGGAAAGAAGGAAAATTAGACTCAGCAGTGAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTTTGTCTAGGTAGGGTGCTGCTTAAGAAAAGTAAAGTTTTGGTACTAGATGAAGCCACTGCATCAGTTGACACGGCTACCGATAATTTGATACAGCAAACTCTTCGGCAACATTTCACTGATTGCACAGTCATTACAATTGCACATAGAATAACTTCTGTTATTGACAGTGATATCGTTCTACTACTTAATGAAGGACTAATTGAGGAATATGATTCCCCAACAAGATTGCTAGAGAACAAGTTATCATCTTTTTCTCAACTTGTTTCTGAGTATACCACTAGATCGAACTCCAGTTTTCGTCCACAATAA
Protein sequence

>Msa0362450

MSVKPVFLHGFSGFLHLLLLVALLVSWLCKKVSNIESRDSSKERIKNTLFTRTLYCSISISVFNLLLFLFDYFSWHRNDFSSEKLVTLLDLAFKTVSWGVVCVFLERRLLYSCETKFPMSLFFKPWCVFYLFVSCYCFTVEIVLYVKRAAIPIQCLVSDVFSVCVGLFICYMCFFMKNEGEIEDRSLHEPLLNGNTKETRGFDTVTPYSNAGIFSILTFSWVGPLISVGKKKTLNLEDVPQLDRKDSLFGAFPYFKDKLEAYCGDNINKVTTFKLVKSLAFSARKEILLTAIFAFVNTLASYVGPYLIDNFVQYLNGQRSFENEGLILVSAFFVAKIVECLTKRQWVFRLQKIGIRIQALLVTIIYNKTLTLSCQSKQGHTSGEIINFMTVDAERVGEFSYHLHDLWLVVFQVLVAMFVLYKNLGIASISGLVATIIVMLANVPLVSILEKFQNKLMVSRDKRMKATSEILRNMRILKLQGWEMKFLSKITELRKSEQFWLKKFLHTIAVIIFVFWSAPAFVSVVTFGSCMVIGVPLESGKILSSLATFQILQEPIYNLPDTISTMSQCKVSLDRIASFLCQDEMRSDIVEKLPKGSSHIAIEVVDGNFSWDLSSPNAVLKNINLKVFHGMKVAICGTVGSGKSTLLSSVLGEVPKISGIMKLCGTKAYVAQSPWIQSSKIEDNILFGMDMERERYENVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRVQIARALYQDADIYLFDDPFSALDAHTGSHLFKECLLKLLSSKTVIYVTHQVEFLPAADLILVMKDGEITQCGKYNDLLNSGTDFMELIGAHRDALSALDSSDGDGTVSDKISTSQQDLCVSLPLGVDKIEEKKEVQNGGTNGKFEPKGQLVQEEEREQGEVGFSVYWNYITTAYGGALVPLVLIAEILFQLLQIGSNYWMASSTPISKDVEPPVGGTTLLVVYVCLAIGSSLCVLSRATLVVTAGYKTATLLFNKMHLCIFRAPMSFFDATPSGRILNRASTDQSEVDTSIPFQTALCACSIIHLLGIIMVMSQVAWQVFIVFIPMTAISIWYQQYYIPSGRELSRLVGVSKAPVIQHFAETISGTSTIRSFDQVSRFQQTNMNLMDGYSRPKFNIAGAMEWLSFRLDMLSSITFSFCLLFLISVPQGVINSGVAGLAVTYGLNLNIIQAWMIWELSNLETKIISVERILQYTSIPSEPSLVVEENRPHDSWPSYGTVDIQNLQVRYAPHMPLVLHGLTCTFVGGMKTGIVGRTGSGKSTLIQALFRIVEPTFGRIMIDNINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYRDEQIWEALDKCQLGDEVRRKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFTDCTVITIAHRITSVIDSDIVLLLNEGLIEEYDSPTRLLENKLSSFSQLVSEYTTRSNSSFRPQ*