Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805050 | PNX96654.1 | 58.590 | 227 | 88 | 3 | 213 | 439 | 243 | 463 | 2.51e-90 | 292 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805050 | sp|P93218|GP3_SOLLC | 52.564 | 234 | 104 | 4 | 207 | 439 | 405 | 632 | 1.44e-81 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805050 | A0A2K3N0V5 | 58.590 | 227 | 88 | 3 | 213 | 439 | 243 | 463 | 1.20e-90 | 292 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0657710 | Msa0805050 | 0.800181 | 1.625851e-48 | -8.615850e-47 |
| Msa0702800 | Msa0805050 | 0.806044 | 9.958293e-50 | -8.615850e-47 |
| Msa0805020 | Msa0805050 | 0.991826 | 9.357215e-190 | -8.615850e-47 |
| Msa0805050 | Msa0828950 | 0.800562 | 1.359506e-48 | -8.615850e-47 |
| Msa0805050 | Msa0828960 | 0.807039 | 6.140897e-50 | -8.615850e-47 |
| Msa0805050 | Msa0842330 | 0.958877 | 7.897481e-117 | -8.615850e-47 |
| Msa0805050 | Msa0972680 | 0.834446 | 2.983460e-56 | -8.615850e-47 |
| Msa0805050 | Msa1202800 | 0.801328 | 9.485003e-49 | -8.615850e-47 |
| Msa0805050 | Msa1255210 | 0.801167 | 1.023045e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805050 | MtrunA17_Chr5g0413591 | 57.709 | 227 | 90 | 3 | 213 | 439 | 410 | 630 | 3.49e-89 | 283 |
| Msa0805050 | MtrunA17_Chr8g0365361 | 48.062 | 258 | 126 | 4 | 184 | 439 | 145 | 396 | 2.52e-83 | 261 |
| Msa0805050 | MtrunA17_Chr8g0365381 | 54.185 | 227 | 98 | 3 | 213 | 439 | 424 | 644 | 8.25e-83 | 267 |
| Msa0805050 | MtrunA17_Chr8g0365401 | 53.744 | 227 | 99 | 3 | 213 | 439 | 407 | 627 | 1.84e-82 | 266 |
| Msa0805050 | MtrunA17_Chr3g0117791 | 45.306 | 245 | 127 | 4 | 196 | 439 | 390 | 628 | 8.41e-70 | 232 |
| Msa0805050 | MtrunA17_Chr5g0412981 | 49.772 | 219 | 104 | 3 | 218 | 436 | 197 | 409 | 2.18e-69 | 226 |
| Msa0805050 | MtrunA17_Chr5g0412981 | 48.148 | 189 | 92 | 3 | 231 | 419 | 2 | 184 | 1.11e-51 | 179 |
| Msa0805050 | MtrunA17_Chr5g0412991 | 49.772 | 219 | 104 | 3 | 218 | 436 | 197 | 409 | 2.35e-69 | 226 |
| Msa0805050 | MtrunA17_Chr5g0412991 | 47.619 | 189 | 93 | 3 | 231 | 419 | 2 | 184 | 2.89e-51 | 178 |
| Msa0805050 | MtrunA17_Chr5g0412951 | 47.664 | 214 | 106 | 3 | 223 | 436 | 1 | 208 | 2.90e-65 | 208 |
| Msa0805050 | MtrunA17_Chr4g0076231 | 58.385 | 161 | 65 | 2 | 280 | 439 | 1 | 160 | 7.32e-65 | 205 |
| Msa0805050 | MtrunA17_Chr5g0413021 | 55.469 | 128 | 55 | 2 | 309 | 436 | 3 | 128 | 1.55e-47 | 159 |
| Msa0805050 | MtrunA17_Chr8g0371951 | 64.773 | 88 | 30 | 1 | 339 | 426 | 1 | 87 | 2.97e-36 | 128 |
| Msa0805050 | MtrunA17_Chr1g0147271 | 31.034 | 290 | 181 | 11 | 150 | 435 | 108 | 382 | 1.27e-29 | 119 |
| Msa0805050 | MtrunA17_Chr1g0147301 | 33.929 | 224 | 133 | 8 | 218 | 436 | 70 | 283 | 2.27e-29 | 116 |
| Msa0805050 | MtrunA17_Chr1g0147321 | 33.482 | 224 | 134 | 8 | 218 | 438 | 27 | 238 | 6.90e-29 | 114 |
| Msa0805050 | MtrunA17_Chr1g0147291 | 33.333 | 222 | 133 | 8 | 218 | 436 | 56 | 265 | 2.78e-28 | 112 |
| Msa0805050 | MtrunA17_Chr1g0146631 | 32.231 | 242 | 149 | 9 | 199 | 437 | 95 | 324 | 6.23e-28 | 113 |
| Msa0805050 | MtrunA17_Chr1g0147331 | 32.645 | 242 | 148 | 9 | 199 | 437 | 95 | 324 | 9.26e-28 | 112 |
| Msa0805050 | MtrunA17_Chr1g0147311 | 33.929 | 224 | 133 | 8 | 218 | 436 | 141 | 354 | 1.84e-27 | 112 |
| Msa0805050 | MtrunA17_Chr1g0147241 | 32.800 | 250 | 147 | 12 | 191 | 435 | 77 | 310 | 2.07e-27 | 111 |
| Msa0805050 | MtrunA17_Chr1g0147261 | 34.247 | 219 | 133 | 7 | 218 | 435 | 89 | 297 | 3.23e-27 | 110 |
| Msa0805050 | MtrunA17_Chr5g0413001 | 54.930 | 71 | 31 | 1 | 365 | 435 | 1 | 70 | 3.03e-26 | 101 |
| Msa0805050 | MtrunA17_Chr3g0139431 | 34.375 | 224 | 130 | 10 | 218 | 435 | 107 | 319 | 1.68e-25 | 106 |
| Msa0805050 | MtrunA17_Chr1g0147251 | 32.273 | 220 | 133 | 9 | 218 | 435 | 35 | 240 | 4.35e-24 | 100 |
| Msa0805050 | MtrunA17_Chr4g0034731 | 27.612 | 268 | 167 | 9 | 185 | 435 | 173 | 430 | 1.25e-23 | 102 |
| Msa0805050 | MtrunA17_Chr5g0412961 | 56.923 | 65 | 27 | 1 | 365 | 429 | 1 | 64 | 1.80e-23 | 93.2 |
| Msa0805050 | MtrunA17_Chr5g0413011 | 43.220 | 118 | 63 | 1 | 231 | 348 | 2 | 115 | 4.35e-23 | 94.0 |
| Msa0805050 | MtrunA17_Chr5g0412971 | 43.220 | 118 | 63 | 1 | 231 | 348 | 2 | 115 | 6.11e-23 | 93.6 |
| Msa0805050 | MtrunA17_Chr4g0034821 | 30.159 | 189 | 115 | 7 | 255 | 436 | 112 | 290 | 2.50e-22 | 96.7 |
| Msa0805050 | MtrunA17_Chr4g0034451 | 29.947 | 187 | 120 | 7 | 255 | 436 | 345 | 525 | 9.64e-22 | 97.8 |
| Msa0805050 | MtrunA17_Chr4g0034721 | 29.032 | 186 | 121 | 7 | 255 | 435 | 395 | 574 | 8.03e-19 | 89.0 |
| Msa0805050 | MtrunA17_Chr3g0138231 | 27.957 | 186 | 123 | 6 | 255 | 436 | 87 | 265 | 8.98e-19 | 86.3 |
| Msa0805050 | MtrunA17_Chr3g0144451 | 29.032 | 186 | 121 | 7 | 255 | 436 | 96 | 274 | 1.26e-18 | 85.9 |
| Msa0805050 | MtrunA17_Chr3g0144421 | 29.464 | 224 | 146 | 8 | 217 | 436 | 86 | 301 | 8.50e-18 | 84.0 |
| Msa0805050 | MtrunA17_Chr3g0144411 | 30.131 | 229 | 136 | 12 | 217 | 436 | 324 | 537 | 8.34e-17 | 82.8 |
| Msa0805050 | MtrunA17_Chr4g0034691 | 26.882 | 186 | 125 | 7 | 255 | 435 | 527 | 706 | 4.25e-16 | 80.9 |
| Msa0805050 | MtrunA17_Chr3g0144391 | 29.694 | 229 | 137 | 12 | 217 | 436 | 291 | 504 | 7.03e-16 | 79.7 |
| Msa0805050 | MtrunA17_Chr6g0485051 | 28.342 | 187 | 122 | 8 | 255 | 435 | 23 | 203 | 6.23e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805050 | AT1G60390.1 | 46.097 | 269 | 125 | 4 | 167 | 435 | 372 | 620 | 7.49e-79 | 256 |
| Msa0805050 | AT1G23760.1 | 47.967 | 246 | 121 | 4 | 195 | 439 | 383 | 622 | 2.96e-75 | 247 |
| Msa0805050 | AT1G70370.2 | 48.305 | 236 | 116 | 3 | 204 | 439 | 397 | 626 | 4.19e-74 | 244 |
| Msa0805050 | AT1G70370.1 | 48.305 | 236 | 116 | 3 | 204 | 439 | 397 | 626 | 4.19e-74 | 244 |
| Msa0805050 | AT5G25610.1 | 32.444 | 225 | 134 | 10 | 218 | 435 | 176 | 389 | 1.66e-22 | 99.4 |
| Msa0805050 | AT1G49320.1 | 26.190 | 210 | 137 | 7 | 237 | 436 | 77 | 278 | 5.61e-16 | 78.6 |
Find 95 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGTTTATGACATGTTAT+TGG | 0.248642 | 5_3:+21463752 | None:intergenic |
| TTTACTAGAACCCAAGAATA+AGG | 0.276829 | 5_3:-21463666 | Msa0805050:CDS |
| TCAGTTCGTAACATCTGTTT+TGG | 0.285524 | 5_3:-21463876 | Msa0805050:CDS |
| TTATACTTCTTTCTTGCGTT+TGG | 0.310930 | 5_3:+21464241 | None:intergenic |
| TTATACTTCTTTCTTGCGTT+TGG | 0.310930 | 5_3:+21464529 | None:intergenic |
| GCCTTATCGAGGCGTGTCAC+TGG | 0.323045 | 5_3:-21463550 | Msa0805050:CDS |
| GCCTTTCAGACTCTTGGTTT+CGG | 0.331580 | 5_3:-21463578 | Msa0805050:CDS |
| CATCCAGCCTTTCAGACTCT+TGG | 0.334821 | 5_3:-21463584 | Msa0805050:CDS |
| GGTAAGGTCAGTAAACTTAA+TGG | 0.336020 | 5_3:-21463791 | Msa0805050:CDS |
| GTCATGTAGATACTACTTCT+TGG | 0.336964 | 5_3:-21463616 | Msa0805050:CDS |
| GAACTGAACCATTTCCTTTG+TGG | 0.361304 | 5_3:+21463892 | None:intergenic |
| TTATACTTCTCTCTTGCGTT+TGG | 0.370596 | 5_3:+21464385 | None:intergenic |
| TTATACTTCTCTCTTGCGTT+TGG | 0.370596 | 5_3:+21464673 | None:intergenic |
| TTTATCTCATCTATCATTGC+CGG | 0.383821 | 5_3:-21464766 | Msa0805050:CDS |
| CAGACTCTTGGTTTCGGACC+AGG | 0.384715 | 5_3:-21463572 | Msa0805050:CDS |
| ATCAATGTTTGACGTTGAAA+AGG | 0.387350 | 5_3:+21464045 | None:intergenic |
| CAGTAATATACAAGCATGTA+TGG | 0.388598 | 5_3:+21463725 | None:intergenic |
| AGAGAGAAAATGTTGACAAA+AGG | 0.391575 | 5_3:-21464151 | Msa0805050:CDS |
| ACTGAGAATGTGAACGGGTC+GGG | 0.397130 | 5_3:-21463830 | Msa0805050:CDS |
| ACACGAGCATATTCAGAAAC+AGG | 0.399675 | 5_3:+21463992 | None:intergenic |
| GAGAGAAAATGTTGACAAAA+GGG | 0.423828 | 5_3:-21464150 | Msa0805050:CDS |
| TGTCAAGTCCACAAAGGAAA+TGG | 0.430204 | 5_3:-21463900 | Msa0805050:CDS |
| GTAGAGTTTGAGAAGTTTCA+CGG | 0.446193 | 5_3:-21464562 | Msa0805050:CDS |
| AGTAGTATCTACATGACATA+TGG | 0.468171 | 5_3:+21463622 | None:intergenic |
| TTTGAATGAAGAACCTTGTC+CGG | 0.468695 | 5_3:+21464733 | None:intergenic |
| CCCAGTGACACGCCTCGATA+AGG | 0.472754 | 5_3:+21463549 | None:intergenic |
| TCAATGTTTGACGTTGAAAA+GGG | 0.489173 | 5_3:+21464046 | None:intergenic |
| AAACCAAGAGTCTGAAAGGC+TGG | 0.490717 | 5_3:+21463581 | None:intergenic |
| TCGGGGAAGACTGTGGTGAT+TGG | 0.493788 | 5_3:-21463812 | Msa0805050:CDS |
| CCTTATCGAGGCGTGTCACT+GGG | 0.499150 | 5_3:-21463549 | Msa0805050:CDS |
| TGTGAAGATCGTGCTGCTCC+AGG | 0.512753 | 5_3:-21463938 | Msa0805050:CDS |
| ATCTATCATTGCCGGAGATG+TGG | 0.518196 | 5_3:-21464758 | Msa0805050:CDS |
| AATGATGCAGAAGGTGAGGA+GGG | 0.530994 | 5_3:-21464355 | Msa0805050:CDS |
| AATGATGCAGAAGGTGAGGA+GGG | 0.530994 | 5_3:-21464499 | Msa0805050:CDS |
| AATGATGCAGAAGGTGAGGA+GGG | 0.530994 | 5_3:-21464643 | Msa0805050:CDS |
| CTGAGAATGTGAACGGGTCG+GGG | 0.533198 | 5_3:-21463829 | Msa0805050:CDS |
| CATTGCCGGAGATGTGGATC+CGG | 0.537803 | 5_3:-21464752 | Msa0805050:CDS |
| CGCAGAACTGAGAATGTGAA+CGG | 0.551196 | 5_3:-21463836 | Msa0805050:CDS |
| AACTTGATATAGACGCACCA+TGG | 0.555359 | 5_3:+21463691 | None:intergenic |
| CTTGTCCGGATCCACATCTC+CGG | 0.559598 | 5_3:+21464747 | None:intergenic |
| CGGAGATGTGGATCCGGACA+AGG | 0.563519 | 5_3:-21464746 | Msa0805050:CDS |
| GCATAAAGCTGAGAAAGATA+AGG | 0.568780 | 5_3:+21464791 | None:intergenic |
| TAATGATGCAGAAGGTGAGG+AGG | 0.569416 | 5_3:-21464356 | Msa0805050:CDS |
| TAATGATGCAGAAGGTGAGG+AGG | 0.569416 | 5_3:-21464500 | Msa0805050:CDS |
| TAATGATGCAGAAGGTGAGG+AGG | 0.569416 | 5_3:-21464644 | Msa0805050:CDS |
| CATGACATATGGCTATAGCT+TGG | 0.569841 | 5_3:+21463633 | None:intergenic |
| ACTTGATATAGACGCACCAT+GGG | 0.571384 | 5_3:+21463692 | None:intergenic |
| GCAGAACTGAGAATGTGAAC+GGG | 0.573207 | 5_3:-21463835 | Msa0805050:CDS |
| CCTTGTCCTCATCTCCATGT+TGG | 0.575942 | 5_3:+21464314 | None:intergenic |
| CCTTGTCCTCATCTCCATGT+TGG | 0.575942 | 5_3:+21464458 | None:intergenic |
| CCTTGTCCTCATCTCCATGT+TGG | 0.575942 | 5_3:+21464602 | None:intergenic |
| TCCGAAACCAAGAGTCTGAA+AGG | 0.581024 | 5_3:+21463577 | None:intergenic |
| AACTGAGAATGTGAACGGGT+CGG | 0.581467 | 5_3:-21463831 | Msa0805050:CDS |
| AAGGTCAGTAAACTTAATGG+TGG | 0.582160 | 5_3:-21463788 | Msa0805050:CDS |
| TGACACGCCTCGATAAGGCC+TGG | 0.583625 | 5_3:+21463554 | None:intergenic |
| GAAGACTGTGGTGATTGGTA+AGG | 0.585023 | 5_3:-21463807 | Msa0805050:CDS |
| GGAGGGAAAGATGACGGTGA+GGG | 0.585849 | 5_3:-21464338 | Msa0805050:CDS |
| GGAGGGAAAGATGACGGTGA+GGG | 0.585849 | 5_3:-21464482 | Msa0805050:CDS |
| GGAGGGAAAGATGACGGTGA+GGG | 0.585849 | 5_3:-21464626 | Msa0805050:CDS |
| AAACATTATAATGATGCAGA+AGG | 0.587451 | 5_3:-21464364 | Msa0805050:CDS |
| AAACATTATAATGATGCAGA+AGG | 0.587451 | 5_3:-21464508 | Msa0805050:CDS |
| AAACATTATAATGATGCAGA+AGG | 0.587451 | 5_3:-21464652 | Msa0805050:CDS |
| AGAGAAAATGTTGACAAAAG+GGG | 0.605845 | 5_3:-21464149 | Msa0805050:CDS |
| AAACATTATAATGACGCAGA+AGG | 0.608284 | 5_3:-21464220 | Msa0805050:CDS |
| AGTAATATACAAGCATGTAT+GGG | 0.610632 | 5_3:+21463726 | None:intergenic |
| AGGTCAGTAAACTTAATGGT+GGG | 0.612539 | 5_3:-21463787 | Msa0805050:CDS |
| TTATAATGATGCAGAAGGTG+AGG | 0.626601 | 5_3:-21464359 | Msa0805050:CDS |
| TTATAATGATGCAGAAGGTG+AGG | 0.626601 | 5_3:-21464503 | Msa0805050:CDS |
| TTATAATGATGCAGAAGGTG+AGG | 0.626601 | 5_3:-21464647 | Msa0805050:CDS |
| AGGTGAGGAGGGAAAGATGA+CGG | 0.628323 | 5_3:-21464344 | Msa0805050:CDS |
| AGGTGAGGAGGGAAAGATGA+CGG | 0.628323 | 5_3:-21464488 | Msa0805050:CDS |
| AGGTGAGGAGGGAAAGATGA+CGG | 0.628323 | 5_3:-21464632 | Msa0805050:CDS |
| CACCACAATGAAGAAACAAG+TGG | 0.628328 | 5_3:-21464815 | None:intergenic |
| TTATAATGACGCAGAAGGTG+AGG | 0.631820 | 5_3:-21464215 | Msa0805050:CDS |
| AAAAGGGGTGATGACGCAAA+TGG | 0.640943 | 5_3:-21464134 | Msa0805050:CDS |
| GAGGGTCCAACATGGAGATG+AGG | 0.641612 | 5_3:-21464320 | Msa0805050:CDS |
| GAGGGTCCAACATGGAGATG+AGG | 0.641612 | 5_3:-21464464 | Msa0805050:CDS |
| GAGGGTCCAACATGGAGATG+AGG | 0.641612 | 5_3:-21464608 | Msa0805050:CDS |
| ATGACGGTGAGGGTCCAACA+TGG | 0.641738 | 5_3:-21464328 | Msa0805050:CDS |
| ATGACGGTGAGGGTCCAACA+TGG | 0.641738 | 5_3:-21464472 | Msa0805050:CDS |
| ATGACGGTGAGGGTCCAACA+TGG | 0.641738 | 5_3:-21464616 | Msa0805050:CDS |
| CCAACATGGAGATGAGGACA+AGG | 0.645853 | 5_3:-21464314 | Msa0805050:CDS |
| CCAACATGGAGATGAGGACA+AGG | 0.645853 | 5_3:-21464458 | Msa0805050:CDS |
| CCAACATGGAGATGAGGACA+AGG | 0.645853 | 5_3:-21464602 | Msa0805050:CDS |
| AGGAGGGAAAGATGACGGTG+AGG | 0.649960 | 5_3:-21464339 | Msa0805050:CDS |
| AGGAGGGAAAGATGACGGTG+AGG | 0.649960 | 5_3:-21464483 | Msa0805050:CDS |
| AGGAGGGAAAGATGACGGTG+AGG | 0.649960 | 5_3:-21464627 | Msa0805050:CDS |
| TTTCGGACCAGGCCTTATCG+AGG | 0.665072 | 5_3:-21463561 | Msa0805050:CDS |
| TTACTGTCACTCAAACCCCA+TGG | 0.666579 | 5_3:-21463708 | Msa0805050:CDS |
| ACAATGTGTCAAGTCCACAA+AGG | 0.692788 | 5_3:-21463906 | Msa0805050:CDS |
| GAACGGGTCGGGGAAGACTG+TGG | 0.694128 | 5_3:-21463819 | Msa0805050:CDS |
| ATGACAACGAGGGTCCACCC+TGG | 0.696791 | 5_3:-21464184 | Msa0805050:CDS |
| GGAGAGAAAGATGACAACGA+GGG | 0.698398 | 5_3:-21464194 | Msa0805050:CDS |
| AGGAGAGAAAGATGACAACG+AGG | 0.732766 | 5_3:-21464195 | Msa0805050:CDS |
| CTTGATATAGACGCACCATG+GGG | 0.752050 | 5_3:+21463693 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTGCAAGTATATTTTC+TGG | + | chr5_3:21464246-21464265 | None:intergenic | 20.0% |
| !! | AAATGTTTATGACATGTTAT+TGG | + | chr5_3:21464567-21464586 | None:intergenic | 20.0% |
| !!! | TTAATCTTTTCCTTATTCTT+GGG | + | chr5_3:21464663-21464682 | None:intergenic | 20.0% |
| !!! | AATTTTGCAAGTATATTTTC+TGG | + | chr5_3:21464246-21464265 | None:intergenic | 20.0% |
| !! | AAATGTTTATGACATGTTAT+TGG | + | chr5_3:21464567-21464586 | None:intergenic | 20.0% |
| !!! | TTAATCTTTTCCTTATTCTT+GGG | + | chr5_3:21464663-21464682 | None:intergenic | 20.0% |
| ! | AAACATTATAATGATGCAGA+AGG | - | chr5_3:21463664-21463683 | Msa0805050:CDS | 25.0% |
| ! | AAACATTATAATGATGCAGA+AGG | - | chr5_3:21463664-21463683 | Msa0805050:CDS | 25.0% |
| ! | AAACATTATAATGATGCAGA+AGG | - | chr5_3:21463664-21463683 | Msa0805050:CDS | 25.0% |
| ! | AGTAATATACAAGCATGTAT+GGG | + | chr5_3:21464593-21464612 | None:intergenic | 25.0% |
| !! | GTTAATCTTTTCCTTATTCT+TGG | + | chr5_3:21464664-21464683 | None:intergenic | 25.0% |
| ! | AAACATTATAATGATGCAGA+AGG | - | chr5_3:21463664-21463683 | Msa0805050:CDS | 25.0% |
| ! | AAACATTATAATGATGCAGA+AGG | - | chr5_3:21463664-21463683 | Msa0805050:CDS | 25.0% |
| ! | AAACATTATAATGATGCAGA+AGG | - | chr5_3:21463664-21463683 | Msa0805050:CDS | 25.0% |
| ! | AGTAATATACAAGCATGTAT+GGG | + | chr5_3:21464593-21464612 | None:intergenic | 25.0% |
| !! | GTTAATCTTTTCCTTATTCT+TGG | + | chr5_3:21464664-21464683 | None:intergenic | 25.0% |
| TTTATCTCATCTATCATTGC+CGG | - | chr5_3:21463550-21463569 | Msa0805050:CDS | 30.0% | |
| TTATACTTCTTTCTTGCGTT+TGG | + | chr5_3:21463790-21463809 | None:intergenic | 30.0% | |
| TTATACTTCTTTCTTGCGTT+TGG | + | chr5_3:21463790-21463809 | None:intergenic | 30.0% | |
| AAACATTATAATGACGCAGA+AGG | - | chr5_3:21464096-21464115 | Msa0805050:CDS | 30.0% | |
| AGAGAGAAAATGTTGACAAA+AGG | - | chr5_3:21464165-21464184 | Msa0805050:CDS | 30.0% | |
| GAGAGAAAATGTTGACAAAA+GGG | - | chr5_3:21464166-21464185 | Msa0805050:CDS | 30.0% | |
| AGAGAAAATGTTGACAAAAG+GGG | - | chr5_3:21464167-21464186 | Msa0805050:CDS | 30.0% | |
| TCAATGTTTGACGTTGAAAA+GGG | + | chr5_3:21464273-21464292 | None:intergenic | 30.0% | |
| ATCAATGTTTGACGTTGAAA+AGG | + | chr5_3:21464274-21464293 | None:intergenic | 30.0% | |
| TCGTGTTAAAAAGATGATGA+GGG | - | chr5_3:21464341-21464360 | Msa0805050:CDS | 30.0% | |
| !!! | ACACATTGTTTTTTTTCACC+TGG | + | chr5_3:21464399-21464418 | None:intergenic | 30.0% |
| CAGTAATATACAAGCATGTA+TGG | + | chr5_3:21464594-21464613 | None:intergenic | 30.0% | |
| TTTACTAGAACCCAAGAATA+AGG | - | chr5_3:21464650-21464669 | Msa0805050:CDS | 30.0% | |
| AGTAGTATCTACATGACATA+TGG | + | chr5_3:21464697-21464716 | None:intergenic | 30.0% | |
| ! | TGTTTGAGAATGAGTTTTCT+TGG | - | chr5_3:21464790-21464809 | Msa0805050:CDS | 30.0% |
| ! | GTTTGAGAATGAGTTTTCTT+GGG | - | chr5_3:21464791-21464810 | Msa0805050:CDS | 30.0% |
| TTTATCTCATCTATCATTGC+CGG | - | chr5_3:21463550-21463569 | Msa0805050:CDS | 30.0% | |
| TTATACTTCTTTCTTGCGTT+TGG | + | chr5_3:21463790-21463809 | None:intergenic | 30.0% | |
| TTATACTTCTTTCTTGCGTT+TGG | + | chr5_3:21463790-21463809 | None:intergenic | 30.0% | |
| AAACATTATAATGACGCAGA+AGG | - | chr5_3:21464096-21464115 | Msa0805050:CDS | 30.0% | |
| AGAGAGAAAATGTTGACAAA+AGG | - | chr5_3:21464165-21464184 | Msa0805050:CDS | 30.0% | |
| GAGAGAAAATGTTGACAAAA+GGG | - | chr5_3:21464166-21464185 | Msa0805050:CDS | 30.0% | |
| AGAGAAAATGTTGACAAAAG+GGG | - | chr5_3:21464167-21464186 | Msa0805050:CDS | 30.0% | |
| TCAATGTTTGACGTTGAAAA+GGG | + | chr5_3:21464273-21464292 | None:intergenic | 30.0% | |
| ATCAATGTTTGACGTTGAAA+AGG | + | chr5_3:21464274-21464293 | None:intergenic | 30.0% | |
| TCGTGTTAAAAAGATGATGA+GGG | - | chr5_3:21464341-21464360 | Msa0805050:CDS | 30.0% | |
| !!! | ACACATTGTTTTTTTTCACC+TGG | + | chr5_3:21464399-21464418 | None:intergenic | 30.0% |
| CAGTAATATACAAGCATGTA+TGG | + | chr5_3:21464594-21464613 | None:intergenic | 30.0% | |
| TTTACTAGAACCCAAGAATA+AGG | - | chr5_3:21464650-21464669 | Msa0805050:CDS | 30.0% | |
| AGTAGTATCTACATGACATA+TGG | + | chr5_3:21464697-21464716 | None:intergenic | 30.0% | |
| ! | TGTTTGAGAATGAGTTTTCT+TGG | - | chr5_3:21464790-21464809 | Msa0805050:CDS | 30.0% |
| ! | GTTTGAGAATGAGTTTTCTT+GGG | - | chr5_3:21464791-21464810 | Msa0805050:CDS | 30.0% |
| GCATAAAGCTGAGAAAGATA+AGG | + | chr5_3:21463528-21463547 | None:intergenic | 35.0% | |
| TTTGAATGAAGAACCTTGTC+CGG | + | chr5_3:21463586-21463605 | None:intergenic | 35.0% | |
| TTATACTTCTCTCTTGCGTT+TGG | + | chr5_3:21463646-21463665 | None:intergenic | 35.0% | |
| TTATAATGATGCAGAAGGTG+AGG | - | chr5_3:21463669-21463688 | Msa0805050:CDS | 35.0% | |
| GTAGAGTTTGAGAAGTTTCA+CGG | - | chr5_3:21463610-21463629 | Msa0805050:CDS | 35.0% | |
| TTATAATGATGCAGAAGGTG+AGG | - | chr5_3:21463669-21463688 | Msa0805050:CDS | 35.0% | |
| TTATACTTCTCTCTTGCGTT+TGG | + | chr5_3:21463646-21463665 | None:intergenic | 35.0% | |
| TTATAATGATGCAGAAGGTG+AGG | - | chr5_3:21463669-21463688 | Msa0805050:CDS | 35.0% | |
| TCTGGTAAAAACGACATCTT+AGG | + | chr5_3:21464228-21464247 | None:intergenic | 35.0% | |
| CTCGTGTTAAAAAGATGATG+AGG | - | chr5_3:21464340-21464359 | Msa0805050:CDS | 35.0% | |
| ! | TCAGTTCGTAACATCTGTTT+TGG | - | chr5_3:21464440-21464459 | Msa0805050:CDS | 35.0% |
| ! | CAGTTCGTAACATCTGTTTT+GGG | - | chr5_3:21464441-21464460 | Msa0805050:CDS | 35.0% |
| !! | TGTTTTGGGTAACAATGTTG+TGG | - | chr5_3:21464455-21464474 | Msa0805050:CDS | 35.0% |
| GGTAAGGTCAGTAAACTTAA+TGG | - | chr5_3:21464525-21464544 | Msa0805050:CDS | 35.0% | |
| AAGGTCAGTAAACTTAATGG+TGG | - | chr5_3:21464528-21464547 | Msa0805050:CDS | 35.0% | |
| AGGTCAGTAAACTTAATGGT+GGG | - | chr5_3:21464529-21464548 | Msa0805050:CDS | 35.0% | |
| GTCATGTAGATACTACTTCT+TGG | - | chr5_3:21464700-21464719 | Msa0805050:CDS | 35.0% | |
| GCATAAAGCTGAGAAAGATA+AGG | + | chr5_3:21463528-21463547 | None:intergenic | 35.0% | |
| TTTGAATGAAGAACCTTGTC+CGG | + | chr5_3:21463586-21463605 | None:intergenic | 35.0% | |
| TTATACTTCTCTCTTGCGTT+TGG | + | chr5_3:21463646-21463665 | None:intergenic | 35.0% | |
| TTATAATGATGCAGAAGGTG+AGG | - | chr5_3:21463669-21463688 | Msa0805050:CDS | 35.0% | |
| GTAGAGTTTGAGAAGTTTCA+CGG | - | chr5_3:21463610-21463629 | Msa0805050:CDS | 35.0% | |
| TTATAATGATGCAGAAGGTG+AGG | - | chr5_3:21463669-21463688 | Msa0805050:CDS | 35.0% | |
| TTATACTTCTCTCTTGCGTT+TGG | + | chr5_3:21463646-21463665 | None:intergenic | 35.0% | |
| TTATAATGATGCAGAAGGTG+AGG | - | chr5_3:21463669-21463688 | Msa0805050:CDS | 35.0% | |
| TCTGGTAAAAACGACATCTT+AGG | + | chr5_3:21464228-21464247 | None:intergenic | 35.0% | |
| CTCGTGTTAAAAAGATGATG+AGG | - | chr5_3:21464340-21464359 | Msa0805050:CDS | 35.0% | |
| ! | TCAGTTCGTAACATCTGTTT+TGG | - | chr5_3:21464440-21464459 | Msa0805050:CDS | 35.0% |
| ! | CAGTTCGTAACATCTGTTTT+GGG | - | chr5_3:21464441-21464460 | Msa0805050:CDS | 35.0% |
| !! | TGTTTTGGGTAACAATGTTG+TGG | - | chr5_3:21464455-21464474 | Msa0805050:CDS | 35.0% |
| GGTAAGGTCAGTAAACTTAA+TGG | - | chr5_3:21464525-21464544 | Msa0805050:CDS | 35.0% | |
| AAGGTCAGTAAACTTAATGG+TGG | - | chr5_3:21464528-21464547 | Msa0805050:CDS | 35.0% | |
| AGGTCAGTAAACTTAATGGT+GGG | - | chr5_3:21464529-21464548 | Msa0805050:CDS | 35.0% | |
| GTCATGTAGATACTACTTCT+TGG | - | chr5_3:21464700-21464719 | Msa0805050:CDS | 35.0% | |
| TTATAATGACGCAGAAGGTG+AGG | - | chr5_3:21464101-21464120 | Msa0805050:CDS | 40.0% | |
| ! | TCTCTCTGAAAAATGCACCA+GGG | + | chr5_3:21464152-21464171 | None:intergenic | 40.0% |
| ! | TTCTCTCTGAAAAATGCACC+AGG | + | chr5_3:21464153-21464172 | None:intergenic | 40.0% |
| ACACGAGCATATTCAGAAAC+AGG | + | chr5_3:21464327-21464346 | None:intergenic | 40.0% | |
| ACAATGTGTCAAGTCCACAA+AGG | - | chr5_3:21464410-21464429 | Msa0805050:CDS | 40.0% | |
| TGTCAAGTCCACAAAGGAAA+TGG | - | chr5_3:21464416-21464435 | Msa0805050:CDS | 40.0% | |
| GAACTGAACCATTTCCTTTG+TGG | + | chr5_3:21464427-21464446 | None:intergenic | 40.0% | |
| ACTTGATATAGACGCACCAT+GGG | + | chr5_3:21464627-21464646 | None:intergenic | 40.0% | |
| AACTTGATATAGACGCACCA+TGG | + | chr5_3:21464628-21464647 | None:intergenic | 40.0% | |
| CATGACATATGGCTATAGCT+TGG | + | chr5_3:21464686-21464705 | None:intergenic | 40.0% | |
| ! | GAATGAGTTTTCTTGGGCTA+AGG | - | chr5_3:21464797-21464816 | Msa0805050:CDS | 40.0% |
| TTATAATGACGCAGAAGGTG+AGG | - | chr5_3:21464101-21464120 | Msa0805050:CDS | 40.0% | |
| ! | TCTCTCTGAAAAATGCACCA+GGG | + | chr5_3:21464152-21464171 | None:intergenic | 40.0% |
| ! | TTCTCTCTGAAAAATGCACC+AGG | + | chr5_3:21464153-21464172 | None:intergenic | 40.0% |
| ACACGAGCATATTCAGAAAC+AGG | + | chr5_3:21464327-21464346 | None:intergenic | 40.0% | |
| ACAATGTGTCAAGTCCACAA+AGG | - | chr5_3:21464410-21464429 | Msa0805050:CDS | 40.0% | |
| TGTCAAGTCCACAAAGGAAA+TGG | - | chr5_3:21464416-21464435 | Msa0805050:CDS | 40.0% | |
| GAACTGAACCATTTCCTTTG+TGG | + | chr5_3:21464427-21464446 | None:intergenic | 40.0% | |
| ACTTGATATAGACGCACCAT+GGG | + | chr5_3:21464627-21464646 | None:intergenic | 40.0% | |
| AACTTGATATAGACGCACCA+TGG | + | chr5_3:21464628-21464647 | None:intergenic | 40.0% | |
| CATGACATATGGCTATAGCT+TGG | + | chr5_3:21464686-21464705 | None:intergenic | 40.0% | |
| ! | GAATGAGTTTTCTTGGGCTA+AGG | - | chr5_3:21464797-21464816 | Msa0805050:CDS | 40.0% |
| ATCTATCATTGCCGGAGATG+TGG | - | chr5_3:21463558-21463577 | Msa0805050:CDS | 45.0% | |
| TAATGATGCAGAAGGTGAGG+AGG | - | chr5_3:21463672-21463691 | Msa0805050:CDS | 45.0% | |
| AATGATGCAGAAGGTGAGGA+GGG | - | chr5_3:21463673-21463692 | Msa0805050:CDS | 45.0% | |
| TAATGATGCAGAAGGTGAGG+AGG | - | chr5_3:21463672-21463691 | Msa0805050:CDS | 45.0% | |
| AATGATGCAGAAGGTGAGGA+GGG | - | chr5_3:21463673-21463692 | Msa0805050:CDS | 45.0% | |
| TAATGATGCAGAAGGTGAGG+AGG | - | chr5_3:21463672-21463691 | Msa0805050:CDS | 45.0% | |
| AATGATGCAGAAGGTGAGGA+GGG | - | chr5_3:21463673-21463692 | Msa0805050:CDS | 45.0% | |
| AGGAGAGAAAGATGACAACG+AGG | - | chr5_3:21464121-21464140 | Msa0805050:CDS | 45.0% | |
| GGAGAGAAAGATGACAACGA+GGG | - | chr5_3:21464122-21464141 | Msa0805050:CDS | 45.0% | |
| ! | AAAAGGGGTGATGACGCAAA+TGG | - | chr5_3:21464182-21464201 | Msa0805050:CDS | 45.0% |
| CGCAGAACTGAGAATGTGAA+CGG | - | chr5_3:21464480-21464499 | Msa0805050:CDS | 45.0% | |
| GCAGAACTGAGAATGTGAAC+GGG | - | chr5_3:21464481-21464500 | Msa0805050:CDS | 45.0% | |
| AACTGAGAATGTGAACGGGT+CGG | - | chr5_3:21464485-21464504 | Msa0805050:CDS | 45.0% | |
| GAAGACTGTGGTGATTGGTA+AGG | - | chr5_3:21464509-21464528 | Msa0805050:CDS | 45.0% | |
| TTACTGTCACTCAAACCCCA+TGG | - | chr5_3:21464608-21464627 | Msa0805050:CDS | 45.0% | |
| CTTGATATAGACGCACCATG+GGG | + | chr5_3:21464626-21464645 | None:intergenic | 45.0% | |
| AAACCAAGAGTCTGAAAGGC+TGG | + | chr5_3:21464738-21464757 | None:intergenic | 45.0% | |
| GCCTTTCAGACTCTTGGTTT+CGG | - | chr5_3:21464738-21464757 | Msa0805050:CDS | 45.0% | |
| TCCGAAACCAAGAGTCTGAA+AGG | + | chr5_3:21464742-21464761 | None:intergenic | 45.0% | |
| ATCTATCATTGCCGGAGATG+TGG | - | chr5_3:21463558-21463577 | Msa0805050:CDS | 45.0% | |
| TAATGATGCAGAAGGTGAGG+AGG | - | chr5_3:21463672-21463691 | Msa0805050:CDS | 45.0% | |
| AATGATGCAGAAGGTGAGGA+GGG | - | chr5_3:21463673-21463692 | Msa0805050:CDS | 45.0% | |
| TAATGATGCAGAAGGTGAGG+AGG | - | chr5_3:21463672-21463691 | Msa0805050:CDS | 45.0% | |
| AATGATGCAGAAGGTGAGGA+GGG | - | chr5_3:21463673-21463692 | Msa0805050:CDS | 45.0% | |
| TAATGATGCAGAAGGTGAGG+AGG | - | chr5_3:21463672-21463691 | Msa0805050:CDS | 45.0% | |
| AATGATGCAGAAGGTGAGGA+GGG | - | chr5_3:21463673-21463692 | Msa0805050:CDS | 45.0% | |
| AGGAGAGAAAGATGACAACG+AGG | - | chr5_3:21464121-21464140 | Msa0805050:CDS | 45.0% | |
| GGAGAGAAAGATGACAACGA+GGG | - | chr5_3:21464122-21464141 | Msa0805050:CDS | 45.0% | |
| ! | AAAAGGGGTGATGACGCAAA+TGG | - | chr5_3:21464182-21464201 | Msa0805050:CDS | 45.0% |
| CGCAGAACTGAGAATGTGAA+CGG | - | chr5_3:21464480-21464499 | Msa0805050:CDS | 45.0% | |
| GCAGAACTGAGAATGTGAAC+GGG | - | chr5_3:21464481-21464500 | Msa0805050:CDS | 45.0% | |
| AACTGAGAATGTGAACGGGT+CGG | - | chr5_3:21464485-21464504 | Msa0805050:CDS | 45.0% | |
| GAAGACTGTGGTGATTGGTA+AGG | - | chr5_3:21464509-21464528 | Msa0805050:CDS | 45.0% | |
| TTACTGTCACTCAAACCCCA+TGG | - | chr5_3:21464608-21464627 | Msa0805050:CDS | 45.0% | |
| CTTGATATAGACGCACCATG+GGG | + | chr5_3:21464626-21464645 | None:intergenic | 45.0% | |
| AAACCAAGAGTCTGAAAGGC+TGG | + | chr5_3:21464738-21464757 | None:intergenic | 45.0% | |
| GCCTTTCAGACTCTTGGTTT+CGG | - | chr5_3:21464738-21464757 | Msa0805050:CDS | 45.0% | |
| TCCGAAACCAAGAGTCTGAA+AGG | + | chr5_3:21464742-21464761 | None:intergenic | 45.0% | |
| AGGTGAGGAGGGAAAGATGA+CGG | - | chr5_3:21463684-21463703 | Msa0805050:CDS | 50.0% | |
| CCTTGTCCTCATCTCCATGT+TGG | + | chr5_3:21463717-21463736 | None:intergenic | 50.0% | |
| CCAACATGGAGATGAGGACA+AGG | - | chr5_3:21463714-21463733 | Msa0805050:CDS | 50.0% | |
| AGGTGAGGAGGGAAAGATGA+CGG | - | chr5_3:21463684-21463703 | Msa0805050:CDS | 50.0% | |
| CCTTGTCCTCATCTCCATGT+TGG | + | chr5_3:21463717-21463736 | None:intergenic | 50.0% | |
| CCAACATGGAGATGAGGACA+AGG | - | chr5_3:21463714-21463733 | Msa0805050:CDS | 50.0% | |
| AGGTGAGGAGGGAAAGATGA+CGG | - | chr5_3:21463684-21463703 | Msa0805050:CDS | 50.0% | |
| CCTTGTCCTCATCTCCATGT+TGG | + | chr5_3:21463717-21463736 | None:intergenic | 50.0% | |
| CCAACATGGAGATGAGGACA+AGG | - | chr5_3:21463714-21463733 | Msa0805050:CDS | 50.0% | |
| ! | CTCTGAAAAATGCACCAGGG+TGG | + | chr5_3:21464149-21464168 | None:intergenic | 50.0% |
| ACTGAGAATGTGAACGGGTC+GGG | - | chr5_3:21464486-21464505 | Msa0805050:CDS | 50.0% | |
| CATCCAGCCTTTCAGACTCT+TGG | - | chr5_3:21464732-21464751 | Msa0805050:CDS | 50.0% | |
| AGGTGAGGAGGGAAAGATGA+CGG | - | chr5_3:21463684-21463703 | Msa0805050:CDS | 50.0% | |
| CCTTGTCCTCATCTCCATGT+TGG | + | chr5_3:21463717-21463736 | None:intergenic | 50.0% | |
| CCAACATGGAGATGAGGACA+AGG | - | chr5_3:21463714-21463733 | Msa0805050:CDS | 50.0% | |
| AGGTGAGGAGGGAAAGATGA+CGG | - | chr5_3:21463684-21463703 | Msa0805050:CDS | 50.0% | |
| CCTTGTCCTCATCTCCATGT+TGG | + | chr5_3:21463717-21463736 | None:intergenic | 50.0% | |
| CCAACATGGAGATGAGGACA+AGG | - | chr5_3:21463714-21463733 | Msa0805050:CDS | 50.0% | |
| AGGTGAGGAGGGAAAGATGA+CGG | - | chr5_3:21463684-21463703 | Msa0805050:CDS | 50.0% | |
| CCTTGTCCTCATCTCCATGT+TGG | + | chr5_3:21463717-21463736 | None:intergenic | 50.0% | |
| CCAACATGGAGATGAGGACA+AGG | - | chr5_3:21463714-21463733 | Msa0805050:CDS | 50.0% | |
| ! | CTCTGAAAAATGCACCAGGG+TGG | + | chr5_3:21464149-21464168 | None:intergenic | 50.0% |
| ACTGAGAATGTGAACGGGTC+GGG | - | chr5_3:21464486-21464505 | Msa0805050:CDS | 50.0% | |
| CATCCAGCCTTTCAGACTCT+TGG | - | chr5_3:21464732-21464751 | Msa0805050:CDS | 50.0% | |
| CATTGCCGGAGATGTGGATC+CGG | - | chr5_3:21463564-21463583 | Msa0805050:CDS | 55.0% | |
| CTTGTCCGGATCCACATCTC+CGG | + | chr5_3:21463572-21463591 | None:intergenic | 55.0% | |
| ! | AGGAGGGAAAGATGACGGTG+AGG | - | chr5_3:21463689-21463708 | Msa0805050:CDS | 55.0% |
| ! | GGAGGGAAAGATGACGGTGA+GGG | - | chr5_3:21463690-21463709 | Msa0805050:CDS | 55.0% |
| ATGACGGTGAGGGTCCAACA+TGG | - | chr5_3:21463700-21463719 | Msa0805050:CDS | 55.0% | |
| GAGGGTCCAACATGGAGATG+AGG | - | chr5_3:21463708-21463727 | Msa0805050:CDS | 55.0% | |
| ! | AGGAGGGAAAGATGACGGTG+AGG | - | chr5_3:21463689-21463708 | Msa0805050:CDS | 55.0% |
| ! | GGAGGGAAAGATGACGGTGA+GGG | - | chr5_3:21463690-21463709 | Msa0805050:CDS | 55.0% |
| ATGACGGTGAGGGTCCAACA+TGG | - | chr5_3:21463700-21463719 | Msa0805050:CDS | 55.0% | |
| GAGGGTCCAACATGGAGATG+AGG | - | chr5_3:21463708-21463727 | Msa0805050:CDS | 55.0% | |
| ! | AGGAGGGAAAGATGACGGTG+AGG | - | chr5_3:21463689-21463708 | Msa0805050:CDS | 55.0% |
| ! | GGAGGGAAAGATGACGGTGA+GGG | - | chr5_3:21463690-21463709 | Msa0805050:CDS | 55.0% |
| ATGACGGTGAGGGTCCAACA+TGG | - | chr5_3:21463700-21463719 | Msa0805050:CDS | 55.0% | |
| GAGGGTCCAACATGGAGATG+AGG | - | chr5_3:21463708-21463727 | Msa0805050:CDS | 55.0% | |
| ! | TGTGAAGATCGTGCTGCTCC+AGG | - | chr5_3:21464378-21464397 | Msa0805050:CDS | 55.0% |
| CTGAGAATGTGAACGGGTCG+GGG | - | chr5_3:21464487-21464506 | Msa0805050:CDS | 55.0% | |
| TCGGGGAAGACTGTGGTGAT+TGG | - | chr5_3:21464504-21464523 | Msa0805050:CDS | 55.0% | |
| CAGACTCTTGGTTTCGGACC+AGG | - | chr5_3:21464744-21464763 | Msa0805050:CDS | 55.0% | |
| ! | TTTCGGACCAGGCCTTATCG+AGG | - | chr5_3:21464755-21464774 | Msa0805050:CDS | 55.0% |
| ! | CCTTATCGAGGCGTGTCACT+GGG | - | chr5_3:21464767-21464786 | Msa0805050:CDS | 55.0% |
| CATTGCCGGAGATGTGGATC+CGG | - | chr5_3:21463564-21463583 | Msa0805050:CDS | 55.0% | |
| CTTGTCCGGATCCACATCTC+CGG | + | chr5_3:21463572-21463591 | None:intergenic | 55.0% | |
| ! | AGGAGGGAAAGATGACGGTG+AGG | - | chr5_3:21463689-21463708 | Msa0805050:CDS | 55.0% |
| ! | GGAGGGAAAGATGACGGTGA+GGG | - | chr5_3:21463690-21463709 | Msa0805050:CDS | 55.0% |
| ATGACGGTGAGGGTCCAACA+TGG | - | chr5_3:21463700-21463719 | Msa0805050:CDS | 55.0% | |
| GAGGGTCCAACATGGAGATG+AGG | - | chr5_3:21463708-21463727 | Msa0805050:CDS | 55.0% | |
| ! | AGGAGGGAAAGATGACGGTG+AGG | - | chr5_3:21463689-21463708 | Msa0805050:CDS | 55.0% |
| ! | GGAGGGAAAGATGACGGTGA+GGG | - | chr5_3:21463690-21463709 | Msa0805050:CDS | 55.0% |
| ATGACGGTGAGGGTCCAACA+TGG | - | chr5_3:21463700-21463719 | Msa0805050:CDS | 55.0% | |
| GAGGGTCCAACATGGAGATG+AGG | - | chr5_3:21463708-21463727 | Msa0805050:CDS | 55.0% | |
| ! | AGGAGGGAAAGATGACGGTG+AGG | - | chr5_3:21463689-21463708 | Msa0805050:CDS | 55.0% |
| ! | GGAGGGAAAGATGACGGTGA+GGG | - | chr5_3:21463690-21463709 | Msa0805050:CDS | 55.0% |
| ATGACGGTGAGGGTCCAACA+TGG | - | chr5_3:21463700-21463719 | Msa0805050:CDS | 55.0% | |
| GAGGGTCCAACATGGAGATG+AGG | - | chr5_3:21463708-21463727 | Msa0805050:CDS | 55.0% | |
| ! | TGTGAAGATCGTGCTGCTCC+AGG | - | chr5_3:21464378-21464397 | Msa0805050:CDS | 55.0% |
| CTGAGAATGTGAACGGGTCG+GGG | - | chr5_3:21464487-21464506 | Msa0805050:CDS | 55.0% | |
| TCGGGGAAGACTGTGGTGAT+TGG | - | chr5_3:21464504-21464523 | Msa0805050:CDS | 55.0% | |
| CAGACTCTTGGTTTCGGACC+AGG | - | chr5_3:21464744-21464763 | Msa0805050:CDS | 55.0% | |
| ! | TTTCGGACCAGGCCTTATCG+AGG | - | chr5_3:21464755-21464774 | Msa0805050:CDS | 55.0% |
| ! | CCTTATCGAGGCGTGTCACT+GGG | - | chr5_3:21464767-21464786 | Msa0805050:CDS | 55.0% |
| CGGAGATGTGGATCCGGACA+AGG | - | chr5_3:21463570-21463589 | Msa0805050:CDS | 60.0% | |
| ATGACAACGAGGGTCCACCC+TGG | - | chr5_3:21464132-21464151 | Msa0805050:CDS | 60.0% | |
| TGACACGCCTCGATAAGGCC+TGG | + | chr5_3:21464765-21464784 | None:intergenic | 60.0% | |
| GCCTTATCGAGGCGTGTCAC+TGG | - | chr5_3:21464766-21464785 | Msa0805050:CDS | 60.0% | |
| CCCAGTGACACGCCTCGATA+AGG | + | chr5_3:21464770-21464789 | None:intergenic | 60.0% | |
| CGGAGATGTGGATCCGGACA+AGG | - | chr5_3:21463570-21463589 | Msa0805050:CDS | 60.0% | |
| ATGACAACGAGGGTCCACCC+TGG | - | chr5_3:21464132-21464151 | Msa0805050:CDS | 60.0% | |
| TGACACGCCTCGATAAGGCC+TGG | + | chr5_3:21464765-21464784 | None:intergenic | 60.0% | |
| GCCTTATCGAGGCGTGTCAC+TGG | - | chr5_3:21464766-21464785 | Msa0805050:CDS | 60.0% | |
| CCCAGTGACACGCCTCGATA+AGG | + | chr5_3:21464770-21464789 | None:intergenic | 60.0% | |
| GAACGGGTCGGGGAAGACTG+TGG | - | chr5_3:21464497-21464516 | Msa0805050:CDS | 65.0% | |
| GAACGGGTCGGGGAAGACTG+TGG | - | chr5_3:21464497-21464516 | Msa0805050:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 21463508 | 21464830 | 21463508 | ID=Msa0805050;Name=Msa0805050 |
| chr5_3 | mRNA | 21463508 | 21464830 | 21463508 | ID=Msa0805050-mRNA-1;Parent=Msa0805050;Name=Msa0805050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|440 |
| chr5_3 | exon | 21463508 | 21464830 | 21463508 | ID=Msa0805050-mRNA-1:exon:8582;Parent=Msa0805050-mRNA-1 |
| chr5_3 | CDS | 21463508 | 21464830 | 21463508 | ID=Msa0805050-mRNA-1:cds;Parent=Msa0805050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
