Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828950 | BAU98053.1 | 96.369 | 358 | 13 | 0 | 1 | 358 | 1 | 358 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828950 | sp|Q9XHP0|11S2_SESIN | 22.276 | 413 | 244 | 13 | 10 | 350 | 42 | 449 | 1.52e-28 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828950 | A0A161JQR4 | 96.369 | 358 | 13 | 0 | 1 | 358 | 1 | 358 | 0.0 | 687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017670 | Msa0828950 | 0.823631 | 1.248621e-53 | -8.615850e-47 |
| Msa0025160 | Msa0828950 | 0.805519 | 1.283741e-49 | -8.615850e-47 |
| Msa0025560 | Msa0828950 | 0.821642 | 3.622442e-53 | -8.615850e-47 |
| Msa0028690 | Msa0828950 | 0.809683 | 1.675979e-50 | -8.615850e-47 |
| Msa0030700 | Msa0828950 | 0.806281 | 8.877997e-50 | -8.615850e-47 |
| Msa0032710 | Msa0828950 | 0.808272 | 3.360808e-50 | -8.615850e-47 |
| Msa0033220 | Msa0828950 | 0.830701 | 2.531865e-55 | -8.615850e-47 |
| Msa0044160 | Msa0828950 | 0.830663 | 2.587396e-55 | -8.615850e-47 |
| Msa0051980 | Msa0828950 | 0.812118 | 4.980104e-51 | -8.615850e-47 |
| Msa0060410 | Msa0828950 | 0.818291 | 2.116171e-52 | -8.615850e-47 |
| Msa0072180 | Msa0828950 | 0.845295 | 4.439365e-59 | -8.615850e-47 |
| Msa0077570 | Msa0828950 | -0.820923 | 5.307746e-53 | -8.615850e-47 |
| Msa0078120 | Msa0828950 | 0.802701 | 4.952569e-49 | -8.615850e-47 |
| Msa0079880 | Msa0828950 | 0.826482 | 2.647630e-54 | -8.615850e-47 |
| Msa0080030 | Msa0828950 | 0.828308 | 9.665765e-55 | -8.615850e-47 |
| Msa0096120 | Msa0828950 | 0.803834 | 2.884769e-49 | -8.615850e-47 |
| Msa0097010 | Msa0828950 | 0.811725 | 6.063442e-51 | -8.615850e-47 |
| Msa0098040 | Msa0828950 | 0.812111 | 4.997792e-51 | -8.615850e-47 |
| Msa0119240 | Msa0828950 | 0.808729 | 2.683632e-50 | -8.615850e-47 |
| Msa0120450 | Msa0828950 | 0.804714 | 1.891962e-49 | -8.615850e-47 |
| Msa0604190 | Msa0828950 | 0.803882 | 2.819156e-49 | -8.615850e-47 |
| Msa0605560 | Msa0828950 | 0.816495 | 5.370370e-52 | -8.615850e-47 |
| Msa0610690 | Msa0828950 | 0.820758 | 5.791922e-53 | -8.615850e-47 |
| Msa0612350 | Msa0828950 | 0.821178 | 4.636051e-53 | -8.615850e-47 |
| Msa0616210 | Msa0828950 | 0.801099 | 1.056256e-48 | -8.615850e-47 |
| Msa0619710 | Msa0828950 | 0.802465 | 5.539122e-49 | -8.615850e-47 |
| Msa0620900 | Msa0828950 | 0.804394 | 2.206546e-49 | -8.615850e-47 |
| Msa0636540 | Msa0828950 | 0.810924 | 9.048226e-51 | -8.615850e-47 |
| Msa0657710 | Msa0828950 | 0.931045 | 6.739021e-94 | -8.615850e-47 |
| Msa0657720 | Msa0828950 | 0.992325 | 1.283405e-192 | -8.615850e-47 |
| Msa0674480 | Msa0828950 | 0.814915 | 1.208169e-51 | -8.615850e-47 |
| Msa0678380 | Msa0828950 | 0.802686 | 4.987909e-49 | -8.615850e-47 |
| Msa0682110 | Msa0828950 | 0.816637 | 4.989390e-52 | -8.615850e-47 |
| Msa0682160 | Msa0828950 | 0.820255 | 7.553629e-53 | -8.615850e-47 |
| Msa0687580 | Msa0828950 | 0.824824 | 6.547131e-54 | -8.615850e-47 |
| Msa0699290 | Msa0828950 | 0.824859 | 6.422626e-54 | -8.615850e-47 |
| Msa0699540 | Msa0828950 | 0.806140 | 9.506920e-50 | -8.615850e-47 |
| Msa0702410 | Msa0828950 | 0.804229 | 2.388062e-49 | -8.615850e-47 |
| Msa0702720 | Msa0828950 | 0.803532 | 3.332556e-49 | -8.615850e-47 |
| Msa0702790 | Msa0828950 | 0.995453 | 2.037803e-216 | -8.615850e-47 |
| Msa0702800 | Msa0828950 | 0.929783 | 4.229162e-93 | -8.615850e-47 |
| Msa0703950 | Msa0828950 | 0.806368 | 8.511396e-50 | -8.615850e-47 |
| Msa0706150 | Msa0828950 | 0.810827 | 9.497771e-51 | -8.615850e-47 |
| Msa0712880 | Msa0828950 | 0.815868 | 7.416199e-52 | -8.615850e-47 |
| Msa0722890 | Msa0828950 | 0.850826 | 1.320458e-60 | -8.615850e-47 |
| Msa0723090 | Msa0828950 | 0.872157 | 3.945670e-67 | -8.615850e-47 |
| Msa0731590 | Msa0828950 | 0.826035 | 3.382587e-54 | -8.615850e-47 |
| Msa0734250 | Msa0828950 | 0.810386 | 1.182818e-50 | -8.615850e-47 |
| Msa0736920 | Msa0828950 | 0.833180 | 6.182745e-56 | -8.615850e-47 |
| Msa0742370 | Msa0828950 | -0.810467 | 1.135966e-50 | -8.615850e-47 |
| Msa0758990 | Msa0828950 | 0.809450 | 1.880760e-50 | -8.615850e-47 |
| Msa0771790 | Msa0828950 | 0.823597 | 1.271763e-53 | -8.615850e-47 |
| Msa0778570 | Msa0828950 | 0.833875 | 4.148572e-56 | -8.615850e-47 |
| Msa0780570 | Msa0828950 | 0.807742 | 4.355642e-50 | -8.615850e-47 |
| Msa0792370 | Msa0828950 | 0.822945 | 1.805291e-53 | -8.615850e-47 |
| Msa0795750 | Msa0828950 | 0.805735 | 1.156359e-49 | -8.615850e-47 |
| Msa0800120 | Msa0828950 | 0.846066 | 2.743587e-59 | -8.615850e-47 |
| Msa0800150 | Msa0828950 | 0.831527 | 1.586926e-55 | -8.615850e-47 |
| Msa0800180 | Msa0828950 | 0.856014 | 4.281737e-62 | -8.615850e-47 |
| Msa0805050 | Msa0828950 | 0.800562 | 1.359506e-48 | -8.615850e-47 |
| Msa0810330 | Msa0828950 | 0.826176 | 3.131665e-54 | -8.615850e-47 |
| Msa0815940 | Msa0828950 | 0.819900 | 9.109769e-53 | -8.615850e-47 |
| Msa0823480 | Msa0828950 | -0.807470 | 4.976206e-50 | -8.615850e-47 |
| Msa0828950 | Msa0828960 | 0.928286 | 3.581137e-92 | -8.615850e-47 |
| Msa0828950 | Msa0838210 | 0.805743 | 1.151911e-49 | -8.615850e-47 |
| Msa0828950 | Msa0842330 | 0.822972 | 1.778881e-53 | -8.615850e-47 |
| Msa0828950 | Msa0843240 | 0.802637 | 5.104087e-49 | -8.615850e-47 |
| Msa0828950 | Msa0848910 | 0.818970 | 1.484654e-52 | -8.615850e-47 |
| Msa0828950 | Msa0850640 | 0.819617 | 1.056922e-52 | -8.615850e-47 |
| Msa0828950 | Msa0862480 | -0.817279 | 3.581645e-52 | -8.615850e-47 |
| Msa0828950 | Msa0865420 | 0.800254 | 1.570748e-48 | -8.615850e-47 |
| Msa0828950 | Msa0867660 | -0.830574 | 2.720231e-55 | -8.615850e-47 |
| Msa0828950 | Msa0873910 | 0.816388 | 5.674787e-52 | -8.615850e-47 |
| Msa0828950 | Msa0876940 | 0.823158 | 1.610582e-53 | -8.615850e-47 |
| Msa0828950 | Msa0879930 | 0.812570 | 3.967502e-51 | -8.615850e-47 |
| Msa0828950 | Msa0882780 | 0.831067 | 2.059667e-55 | -8.615850e-47 |
| Msa0828950 | Msa0900330 | 0.823522 | 1.324067e-53 | -8.615850e-47 |
| Msa0828950 | Msa0903590 | -0.831284 | 1.821439e-55 | -8.615850e-47 |
| Msa0828950 | Msa0906660 | 0.814034 | 1.891559e-51 | -8.615850e-47 |
| Msa0828950 | Msa0907880 | 0.821101 | 4.829203e-53 | -8.615850e-47 |
| Msa0828950 | Msa0908260 | -0.815894 | 7.317843e-52 | -8.615850e-47 |
| Msa0828950 | Msa0908270 | -0.821615 | 3.673956e-53 | -8.615850e-47 |
| Msa0828950 | Msa0908280 | -0.817344 | 3.461796e-52 | -8.615850e-47 |
| Msa0828950 | Msa0908350 | -0.815405 | 9.403223e-52 | -8.615850e-47 |
| Msa0828950 | Msa0908470 | -0.824634 | 7.259574e-54 | -8.615850e-47 |
| Msa0828950 | Msa0908500 | -0.810460 | 1.140254e-50 | -8.615850e-47 |
| Msa0828950 | Msa0908510 | -0.822225 | 2.654664e-53 | -8.615850e-47 |
| Msa0828950 | Msa0908630 | -0.818260 | 2.150794e-52 | -8.615850e-47 |
| Msa0828950 | Msa0908690 | -0.810709 | 1.007471e-50 | -8.615850e-47 |
| Msa0828950 | Msa0908700 | -0.823528 | 1.319302e-53 | -8.615850e-47 |
| Msa0828950 | Msa0909260 | 0.872469 | 3.105992e-67 | -8.615850e-47 |
| Msa0828950 | Msa0924900 | -0.826364 | 2.825101e-54 | -8.615850e-47 |
| Msa0828950 | Msa0928450 | 0.825603 | 4.284212e-54 | -8.615850e-47 |
| Msa0828950 | Msa0940910 | 0.836399 | 9.572013e-57 | -8.615850e-47 |
| Msa0828950 | Msa0942220 | 0.817555 | 3.104004e-52 | -8.615850e-47 |
| Msa0828950 | Msa0946330 | 0.811431 | 7.024759e-51 | -8.615850e-47 |
| Msa0828950 | Msa0947870 | 0.803668 | 3.123321e-49 | -8.615850e-47 |
| Msa0828950 | Msa0972680 | 0.835544 | 1.577942e-56 | -8.615850e-47 |
| Msa0828950 | Msa0973080 | -0.817732 | 2.831519e-52 | -8.615850e-47 |
| Msa0828950 | Msa0983600 | -0.825955 | 3.534903e-54 | -8.615850e-47 |
| Msa0828950 | Msa0983610 | -0.826952 | 2.045174e-54 | -8.615850e-47 |
| Msa0828950 | Msa0984520 | 0.805946 | 1.044357e-49 | -8.615850e-47 |
| Msa0828950 | Msa1015360 | 0.806452 | 8.170264e-50 | -8.615850e-47 |
| Msa0828950 | Msa1019420 | 0.851511 | 8.462729e-61 | -8.615850e-47 |
| Msa0828950 | Msa1022420 | 0.832107 | 1.141712e-55 | -8.615850e-47 |
| Msa0828950 | Msa1029820 | 0.847205 | 1.339974e-59 | -8.615850e-47 |
| Msa0828950 | Msa1035190 | 0.802161 | 6.396972e-49 | -8.615850e-47 |
| Msa0828950 | Msa1039100 | 0.807407 | 5.132091e-50 | -8.615850e-47 |
| Msa0828950 | Msa1041060 | 0.815410 | 9.376159e-52 | -8.615850e-47 |
| Msa0828950 | Msa1042300 | 0.805280 | 1.440893e-49 | -8.615850e-47 |
| Msa0828950 | Msa1044250 | 0.874327 | 7.363619e-68 | -8.615850e-47 |
| Msa0828950 | Msa1068940 | 0.851359 | 9.342722e-61 | -8.615850e-47 |
| Msa0828950 | Msa1081170 | 0.805841 | 1.098722e-49 | -8.615850e-47 |
| Msa0828950 | Msa1082410 | 0.815400 | 9.426033e-52 | -8.615850e-47 |
| Msa0828950 | Msa1086760 | -0.823213 | 1.563105e-53 | -8.615850e-47 |
| Msa0828950 | Msa1086770 | -0.825345 | 4.931962e-54 | -8.615850e-47 |
| Msa0828950 | Msa1086940 | -0.824953 | 6.103210e-54 | -8.615850e-47 |
| Msa0828950 | Msa1087070 | -0.820088 | 8.251682e-53 | -8.615850e-47 |
| Msa0828950 | Msa1087080 | -0.815513 | 8.897063e-52 | -8.615850e-47 |
| Msa0828950 | Msa1087090 | -0.825895 | 3.651549e-54 | -8.615850e-47 |
| Msa0828950 | Msa1092310 | 0.836145 | 1.110963e-56 | -8.615850e-47 |
| Msa0828950 | Msa1106590 | 0.850453 | 1.681910e-60 | -8.615850e-47 |
| Msa0828950 | Msa1111910 | 0.832476 | 9.249295e-56 | -8.615850e-47 |
| Msa0828950 | Msa1125250 | 0.823225 | 1.553047e-53 | -8.615850e-47 |
| Msa0828950 | Msa1131270 | 0.817923 | 2.563637e-52 | -8.615850e-47 |
| Msa0828950 | Msa1133750 | 0.810011 | 1.424606e-50 | -8.615850e-47 |
| Msa0828950 | Msa1149910 | 0.846716 | 1.823933e-59 | -8.615850e-47 |
| Msa0828950 | Msa1154060 | 0.804085 | 2.558252e-49 | -8.615850e-47 |
| Msa0828950 | Msa1154320 | 0.868683 | 5.439770e-66 | -8.615850e-47 |
| Msa0828950 | Msa1156710 | 0.850437 | 1.698756e-60 | -8.615850e-47 |
| Msa0828950 | Msa1166190 | 0.814435 | 1.543031e-51 | -8.615850e-47 |
| Msa0828950 | Msa1166290 | 0.806276 | 8.897138e-50 | -8.615850e-47 |
| Msa0828950 | Msa1167310 | 0.816557 | 5.200677e-52 | -8.615850e-47 |
| Msa0828950 | Msa1184680 | 0.810929 | 9.027721e-51 | -8.615850e-47 |
| Msa0828950 | Msa1192360 | 0.804041 | 2.612608e-49 | -8.615850e-47 |
| Msa0828950 | Msa1202800 | 0.866858 | 2.096615e-65 | -8.615850e-47 |
| Msa0828950 | Msa1203440 | 0.842156 | 3.070343e-58 | -8.615850e-47 |
| Msa0828950 | Msa1203650 | 0.818731 | 1.682315e-52 | -8.615850e-47 |
| Msa0828950 | Msa1207390 | 0.831462 | 1.647113e-55 | -8.615850e-47 |
| Msa0828950 | Msa1207430 | 0.824562 | 7.547575e-54 | -8.615850e-47 |
| Msa0828950 | Msa1207920 | -0.816651 | 4.953513e-52 | -8.615850e-47 |
| Msa0828950 | Msa1214310 | 0.807631 | 4.599560e-50 | -8.615850e-47 |
| Msa0828950 | Msa1238190 | 0.808196 | 3.488357e-50 | -8.615850e-47 |
| Msa0828950 | Msa1238660 | 0.800942 | 1.137604e-48 | -8.615850e-47 |
| Msa0828950 | Msa1242130 | 0.847958 | 8.316080e-60 | -8.615850e-47 |
| Msa0828950 | Msa1242160 | 0.865676 | 4.968276e-65 | -8.615850e-47 |
| Msa0828950 | Msa1250610 | 0.865984 | 3.971406e-65 | -8.615850e-47 |
| Msa0828950 | Msa1250660 | 0.833159 | 6.260573e-56 | -8.615850e-47 |
| Msa0828950 | Msa1255210 | 0.872192 | 3.840513e-67 | -8.615850e-47 |
| Msa0828950 | Msa1255690 | 0.820899 | 5.375570e-53 | -8.615850e-47 |
| Msa0828950 | Msa1257610 | 0.829040 | 6.430689e-55 | -8.615850e-47 |
| Msa0828950 | Msa1268360 | 0.854759 | 9.940529e-62 | -8.615850e-47 |
| Msa0828950 | Msa1268390 | 0.864579 | 1.098955e-64 | -8.615850e-47 |
| Msa0828950 | Msa1268420 | 0.855993 | 4.342665e-62 | -8.615850e-47 |
| Msa0828950 | Msa1273320 | 0.813677 | 2.267483e-51 | -8.615850e-47 |
| Msa0828950 | Msa1275160 | 0.811729 | 6.051837e-51 | -8.615850e-47 |
| Msa0828950 | Msa1283930 | 0.891894 | 2.618062e-74 | -8.615850e-47 |
| Msa0828950 | Msa1283960 | 0.854668 | 1.056154e-61 | -8.615850e-47 |
| Msa0828950 | Msa1283980 | 0.800513 | 1.391139e-48 | -8.615850e-47 |
| Msa0828950 | Msa1284000 | 0.838430 | 2.889671e-57 | -8.615850e-47 |
| Msa0828950 | Msa1284020 | 0.845163 | 4.818626e-59 | -8.615850e-47 |
| Msa0828950 | Msa1295650 | 0.871001 | 9.527307e-67 | -8.615850e-47 |
| Msa0828950 | Msa1301280 | -0.815741 | 7.912687e-52 | -8.615850e-47 |
| Msa0828950 | Msa1322960 | 0.888540 | 5.393138e-73 | -8.615850e-47 |
| Msa0828950 | Msa1322980 | 0.827615 | 1.418670e-54 | -8.615850e-47 |
| Msa0828950 | Msa1323010 | 0.810960 | 8.886223e-51 | -8.615850e-47 |
| Msa0828950 | Msa1323070 | 0.854791 | 9.725188e-62 | -8.615850e-47 |
| Msa0828950 | Msa1326640 | 0.852217 | 5.337671e-61 | -8.615850e-47 |
| Msa0828950 | Msa1326680 | 0.867115 | 1.736255e-65 | -8.615850e-47 |
| Msa0828950 | Msa1326710 | 0.872094 | 4.140832e-67 | -8.615850e-47 |
| Msa0828950 | Msa1331570 | -0.811484 | 6.841260e-51 | -8.615850e-47 |
| Msa0828950 | Msa1341840 | 0.824968 | 6.055215e-54 | -8.615850e-47 |
| Msa0828950 | Msa1343600 | 0.835959 | 1.238244e-56 | -8.615850e-47 |
| Msa0828950 | Msa1348170 | -0.845191 | 4.736422e-59 | -8.615850e-47 |
| Msa0828950 | Msa1354360 | -0.828277 | 9.831164e-55 | -8.615850e-47 |
| Msa0828950 | Msa1354370 | -0.810014 | 1.422823e-50 | -8.615850e-47 |
| Msa0828950 | Msa1354400 | -0.826692 | 2.359852e-54 | -8.615850e-47 |
| Msa0828950 | Msa1354520 | -0.827176 | 1.808183e-54 | -8.615850e-47 |
| Msa0828950 | Msa1354530 | -0.825409 | 4.763466e-54 | -8.615850e-47 |
| Msa0828950 | Msa1354650 | -0.825167 | 5.432368e-54 | -8.615850e-47 |
| Msa0828950 | Msa1354660 | -0.831908 | 1.278535e-55 | -8.615850e-47 |
| Msa0828950 | Msa1354780 | -0.819461 | 1.147709e-52 | -8.615850e-47 |
| Msa0828950 | Msa1354790 | -0.826207 | 3.078357e-54 | -8.615850e-47 |
| Msa0828950 | Msa1354960 | -0.828954 | 6.745289e-55 | -8.615850e-47 |
| Msa0828950 | Msa1356600 | -0.809696 | 1.665324e-50 | -8.615850e-47 |
| Msa0828950 | Msa1357070 | 0.820090 | 8.240701e-53 | -8.615850e-47 |
| Msa0828950 | Msa1365990 | -0.819956 | 8.843067e-53 | -8.615850e-47 |
| Msa0828950 | Msa1366020 | -0.827705 | 1.349949e-54 | -8.615850e-47 |
| Msa0828950 | Msa1366030 | -0.824822 | 6.554686e-54 | -8.615850e-47 |
| Msa0828950 | Msa1366060 | -0.825950 | 3.543461e-54 | -8.615850e-47 |
| Msa0828950 | Msa1368260 | -0.820589 | 6.334490e-53 | -8.615850e-47 |
| Msa0828950 | Msa1368390 | 0.825619 | 4.247224e-54 | -8.615850e-47 |
| Msa0828950 | Msa1385260 | 0.806461 | 8.135311e-50 | -8.615850e-47 |
| Msa0828950 | Msa1385360 | -0.820815 | 5.618348e-53 | -8.615850e-47 |
| Msa0828950 | Msa1385390 | -0.823000 | 1.752431e-53 | -8.615850e-47 |
| Msa0828950 | Msa1391130 | -0.823819 | 1.128044e-53 | -8.615850e-47 |
| Msa0828950 | Msa1391140 | -0.826034 | 3.384305e-54 | -8.615850e-47 |
| Msa0828950 | Msa1391260 | -0.823146 | 1.620916e-53 | -8.615850e-47 |
| Msa0828950 | Msa1396200 | -0.804891 | 1.737761e-49 | -8.615850e-47 |
| Msa0828950 | Msa1407810 | 0.844710 | 6.387564e-59 | -8.615850e-47 |
| Msa0828950 | Msa1407840 | 0.808424 | 3.118996e-50 | -8.615850e-47 |
| Msa0828950 | Msa1408390 | 0.824219 | 9.087136e-54 | -8.615850e-47 |
| Msa0828950 | Msa1410160 | 0.813002 | 3.189873e-51 | -8.615850e-47 |
| Msa0828950 | Msa1417370 | 0.824182 | 9.269193e-54 | -8.615850e-47 |
| Msa0828950 | Msa1417380 | 0.818294 | 2.112703e-52 | -8.615850e-47 |
| Msa0828950 | Msa1422860 | 0.858825 | 6.315806e-63 | -8.615850e-47 |
| Msa0828950 | Msa1433040 | 0.801664 | 8.092598e-49 | -8.615850e-47 |
| Msa0828950 | Msa1433360 | 0.875375 | 3.238128e-68 | -8.615850e-47 |
| Msa0828950 | Msa1433570 | 0.805015 | 1.637097e-49 | -8.615850e-47 |
| Msa0828950 | Msa1437780 | 0.845612 | 3.643893e-59 | -8.615850e-47 |
| Msa0828950 | Msa1437810 | 0.804646 | 1.955077e-49 | -8.615850e-47 |
| Msa0828950 | Msa1439250 | 0.859000 | 5.597064e-63 | -8.615850e-47 |
| Msa0828950 | Msa1439270 | 0.851047 | 1.144278e-60 | -8.615850e-47 |
| Msa0828950 | Msa1439930 | 0.803391 | 3.565167e-49 | -8.615850e-47 |
| Msa0828950 | Msa1445530 | 0.890280 | 1.136599e-73 | -8.615850e-47 |
| Msa0828950 | Msa1447100 | 0.818285 | 2.122862e-52 | -8.615850e-47 |
| Msa0828950 | Msa1449900 | 0.816889 | 4.382094e-52 | -8.615850e-47 |
| Msa0828950 | Msa1451520 | 0.813767 | 2.166412e-51 | -8.615850e-47 |
| Msa0828950 | Msa1454500 | 0.809264 | 2.061870e-50 | -8.615850e-47 |
| Msa0828950 | Msa1461370 | 0.822164 | 2.742036e-53 | -8.615850e-47 |
| Msa0121300 | Msa0828950 | 0.836310 | 1.008677e-56 | -8.615850e-47 |
| Msa0127770 | Msa0828950 | 0.809490 | 1.844413e-50 | -8.615850e-47 |
| Msa0134780 | Msa0828950 | 0.822475 | 2.321972e-53 | -8.615850e-47 |
| Msa0152850 | Msa0828950 | 0.854815 | 9.571174e-62 | -8.615850e-47 |
| Msa0165640 | Msa0828950 | 0.814692 | 1.353613e-51 | -8.615850e-47 |
| Msa0166190 | Msa0828950 | 0.832922 | 7.170619e-56 | -8.615850e-47 |
| Msa0183710 | Msa0828950 | 0.820141 | 8.023527e-53 | -8.615850e-47 |
| Msa0192680 | Msa0828950 | 0.814631 | 1.396246e-51 | -8.615850e-47 |
| Msa0198990 | Msa0828950 | 0.841110 | 5.796639e-58 | -8.615850e-47 |
| Msa0203080 | Msa0828950 | 0.818376 | 2.024350e-52 | -8.615850e-47 |
| Msa0217060 | Msa0828950 | 0.831385 | 1.720103e-55 | -8.615850e-47 |
| Msa0218500 | Msa0828950 | 0.812066 | 5.109804e-51 | -8.615850e-47 |
| Msa0224870 | Msa0828950 | 0.817893 | 2.603162e-52 | -8.615850e-47 |
| Msa0226310 | Msa0828950 | 0.865973 | 4.001544e-65 | -8.615850e-47 |
| Msa0235290 | Msa0828950 | 0.825055 | 5.775987e-54 | -8.615850e-47 |
| Msa0365210 | Msa0828950 | 0.840521 | 8.269953e-58 | -8.615850e-47 |
| Msa0375330 | Msa0828950 | -0.841030 | 6.081566e-58 | -8.615850e-47 |
| Msa0376430 | Msa0828950 | 0.814492 | 1.498856e-51 | -8.615850e-47 |
| Msa0386880 | Msa0828950 | 0.809260 | 2.065606e-50 | -8.615850e-47 |
| Msa0400650 | Msa0828950 | 0.808128 | 3.606611e-50 | -8.615850e-47 |
| Msa0401860 | Msa0828950 | -0.811991 | 5.308021e-51 | -8.615850e-47 |
| Msa0402070 | Msa0828950 | -0.851104 | 1.103060e-60 | -8.615850e-47 |
| Msa0405460 | Msa0828950 | -0.807457 | 5.007004e-50 | -8.615850e-47 |
| Msa0405470 | Msa0828950 | -0.811819 | 5.783733e-51 | -8.615850e-47 |
| Msa0405550 | Msa0828950 | -0.813827 | 2.102151e-51 | -8.615850e-47 |
| Msa0412790 | Msa0828950 | 0.824423 | 8.138417e-54 | -8.615850e-47 |
| Msa0415100 | Msa0828950 | 0.800325 | 1.519348e-48 | -8.615850e-47 |
| Msa0418450 | Msa0828950 | 0.803294 | 3.733577e-49 | -8.615850e-47 |
| Msa0420610 | Msa0828950 | 0.804204 | 2.417155e-49 | -8.615850e-47 |
| Msa0433650 | Msa0828950 | 0.807266 | 5.496683e-50 | -8.615850e-47 |
| Msa0437440 | Msa0828950 | -0.820258 | 7.541975e-53 | -8.615850e-47 |
| Msa0437520 | Msa0828950 | 0.827448 | 1.555564e-54 | -8.615850e-47 |
| Msa0453040 | Msa0828950 | 0.808549 | 2.932945e-50 | -8.615850e-47 |
| Msa0457060 | Msa0828950 | 0.804163 | 2.464115e-49 | -8.615850e-47 |
| Msa0457560 | Msa0828950 | 0.825672 | 4.126534e-54 | -8.615850e-47 |
| Msa0457570 | Msa0828950 | 0.846312 | 2.350567e-59 | -8.615850e-47 |
| Msa0480900 | Msa0828950 | -0.809529 | 1.809070e-50 | -8.615850e-47 |
| Msa0241750 | Msa0828950 | 0.837426 | 5.236205e-57 | -8.615850e-47 |
| Msa0246210 | Msa0828950 | 0.823754 | 1.168477e-53 | -8.615850e-47 |
| Msa0256920 | Msa0828950 | 0.821682 | 3.546979e-53 | -8.615850e-47 |
| Msa0269170 | Msa0828950 | -0.827321 | 1.668973e-54 | -8.615850e-47 |
| Msa0272600 | Msa0828950 | 0.820635 | 6.181912e-53 | -8.615850e-47 |
| Msa0279810 | Msa0828950 | 0.805379 | 1.373170e-49 | -8.615850e-47 |
| Msa0282960 | Msa0828950 | 0.809124 | 2.209265e-50 | -8.615850e-47 |
| Msa0284800 | Msa0828950 | 0.860398 | 2.124580e-63 | -8.615850e-47 |
| Msa0287480 | Msa0828950 | 0.804274 | 2.337266e-49 | -8.615850e-47 |
| Msa0298000 | Msa0828950 | 0.803352 | 3.631120e-49 | -8.615850e-47 |
| Msa0304570 | Msa0828950 | 0.856599 | 2.884392e-62 | -8.615850e-47 |
| Msa0304680 | Msa0828950 | 0.862399 | 5.209895e-64 | -8.615850e-47 |
| Msa0307670 | Msa0828950 | 0.828283 | 9.796675e-55 | -8.615850e-47 |
| Msa0307740 | Msa0828950 | 0.811135 | 8.146020e-51 | -8.615850e-47 |
| Msa0308470 | Msa0828950 | 0.848594 | 5.548691e-60 | -8.615850e-47 |
| Msa0312810 | Msa0828950 | 0.826573 | 2.518907e-54 | -8.615850e-47 |
| Msa0313900 | Msa0828950 | 0.839968 | 1.153354e-57 | -8.615850e-47 |
| Msa0330520 | Msa0828950 | 0.864875 | 8.873041e-65 | -8.615850e-47 |
| Msa0334630 | Msa0828950 | 0.817094 | 3.940685e-52 | -8.615850e-47 |
| Msa0334660 | Msa0828950 | 0.839129 | 1.905905e-57 | -8.615850e-47 |
| Msa0336110 | Msa0828950 | 0.835096 | 2.046993e-56 | -8.615850e-47 |
| Msa0343210 | Msa0828950 | 0.826608 | 2.471172e-54 | -8.615850e-47 |
| Msa0355080 | Msa0828950 | -0.801330 | 9.472345e-49 | -8.615850e-47 |
| Msa0356270 | Msa0828950 | 0.814070 | 1.857983e-51 | -8.615850e-47 |
| Msa0357300 | Msa0828950 | 0.809658 | 1.696973e-50 | -8.615850e-47 |
| Msa0357310 | Msa0828950 | 0.822409 | 2.406054e-53 | -8.615850e-47 |
| Msa0358300 | Msa0828950 | 0.850418 | 1.720565e-60 | -8.615850e-47 |
| Msa0483970 | Msa0828950 | -0.817620 | 3.001030e-52 | -8.615850e-47 |
| Msa0512630 | Msa0828950 | 0.821932 | 3.103039e-53 | -8.615850e-47 |
| Msa0513970 | Msa0828950 | 0.818412 | 1.986507e-52 | -8.615850e-47 |
| Msa0521490 | Msa0828950 | 0.800993 | 1.110188e-48 | -8.615850e-47 |
| Msa0543560 | Msa0828950 | 0.819301 | 1.248294e-52 | -8.615850e-47 |
| Msa0544490 | Msa0828950 | 0.810409 | 1.169494e-50 | -8.615850e-47 |
| Msa0566280 | Msa0828950 | 0.883544 | 4.099984e-71 | -8.615850e-47 |
| Msa0567330 | Msa0828950 | 0.850824 | 1.322668e-60 | -8.615850e-47 |
| Msa0567570 | Msa0828950 | 0.818795 | 1.626731e-52 | -8.615850e-47 |
| Msa0576320 | Msa0828950 | 0.833746 | 4.467034e-56 | -8.615850e-47 |
| Msa0579160 | Msa0828950 | 0.803577 | 3.262944e-49 | -8.615850e-47 |
| Msa0591340 | Msa0828950 | -0.806168 | 9.378301e-50 | -8.615850e-47 |
| Msa0596830 | Msa0828950 | 0.800731 | 1.255755e-48 | -8.615850e-47 |
| Msa0596840 | Msa0828950 | 0.826691 | 2.361138e-54 | -8.615850e-47 |
| Msa0599420 | Msa0828950 | 0.815865 | 7.427617e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828950 | MtrunA17_Chr8g0380731 | 93.872 | 359 | 21 | 1 | 1 | 358 | 1 | 359 | 0.0 | 673 |
| Msa0828950 | MtrunA17_Chr8g0380741 | 84.358 | 358 | 56 | 0 | 1 | 358 | 1 | 358 | 0.0 | 602 |
| Msa0828950 | MtrunA17_Chr8g0380751 | 71.477 | 298 | 85 | 0 | 31 | 328 | 3 | 300 | 8.32e-153 | 432 |
| Msa0828950 | MtrunA17_Chr4g0030791 | 41.292 | 356 | 207 | 2 | 1 | 356 | 1 | 354 | 5.54e-102 | 305 |
| Msa0828950 | MtrunA17_Chr4g0036721 | 41.011 | 356 | 208 | 2 | 1 | 356 | 1 | 354 | 8.75e-101 | 301 |
| Msa0828950 | MtrunA17_Chr4g0030781 | 40.730 | 356 | 209 | 2 | 1 | 356 | 1 | 354 | 1.98e-100 | 301 |
| Msa0828950 | MtrunA17_Chr4g0014171 | 41.011 | 356 | 208 | 2 | 1 | 356 | 1 | 354 | 4.46e-100 | 300 |
| Msa0828950 | MtrunA17_Chr5g0405881 | 32.157 | 255 | 130 | 4 | 96 | 348 | 33 | 246 | 2.37e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828950 | AT1G07750.1 | 40.563 | 355 | 207 | 3 | 1 | 355 | 1 | 351 | 1.78e-95 | 288 |
| Msa0828950 | AT2G28680.1 | 40.336 | 357 | 211 | 2 | 1 | 357 | 1 | 355 | 8.47e-95 | 286 |
| Msa0828950 | AT1G03890.1 | 24.679 | 389 | 223 | 13 | 32 | 357 | 67 | 448 | 1.54e-19 | 89.7 |
| Msa0828950 | AT2G28490.1 | 23.810 | 420 | 236 | 15 | 8 | 357 | 89 | 494 | 1.24e-17 | 84.3 |
| Msa0828950 | AT1G03880.1 | 22.222 | 405 | 243 | 10 | 13 | 351 | 43 | 441 | 1.97e-17 | 83.6 |
| Msa0828950 | AT5G44120.3 | 22.276 | 413 | 240 | 13 | 13 | 351 | 49 | 454 | 2.40e-16 | 80.5 |
| Msa0828950 | AT5G44120.1 | 31.507 | 146 | 99 | 1 | 206 | 351 | 123 | 267 | 1.66e-13 | 70.5 |
| Msa0828950 | AT5G44120.2 | 31.507 | 146 | 99 | 1 | 206 | 351 | 206 | 350 | 3.51e-13 | 70.5 |
| Msa0828950 | AT4G28520.3 | 30.822 | 146 | 100 | 1 | 206 | 351 | 290 | 434 | 1.36e-12 | 68.9 |
| Msa0828950 | AT4G28520.1 | 30.822 | 146 | 100 | 1 | 206 | 351 | 361 | 505 | 1.68e-12 | 68.9 |
Find 108 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTAACATTATATTTCT+TGG | 0.148846 | 5_4:-1900502 | Msa0828950:CDS |
| TCCACTCATAAGAAATTTAT+TGG | 0.149911 | 5_4:+1899464 | None:intergenic |
| TCGTGACTAATCCCACATTT+TGG | 0.192541 | 5_4:+1900218 | None:intergenic |
| CGATAATTAAAATTTATTAA+TGG | 0.209904 | 5_4:+1899316 | None:intergenic |
| AGAAGAAGTTTAATCAAATA+TGG | 0.225837 | 5_4:-1901076 | Msa0828950:exon |
| ACTTGAACCTAATGCTATTA+AGG | 0.231472 | 5_4:-1900134 | Msa0828950:CDS |
| AACCCAACATCCTTAATAAA+AGG | 0.256810 | 5_4:+1900175 | None:intergenic |
| TGTTGGGTTAAGTGTGATTA+GGG | 0.277054 | 5_4:-1900161 | Msa0828950:CDS |
| AAGCTAACACAAAGCCAAAA+AGG | 0.292183 | 5_4:-1900349 | Msa0828950:CDS |
| ATGTTGGGTTAAGTGTGATT+AGG | 0.298094 | 5_4:-1900162 | Msa0828950:CDS |
| TGTATGGAATTCATGTAATA+AGG | 0.302209 | 5_4:-1899424 | Msa0828950:three_prime_UTR |
| ACTGAATCCCAGGGGTAGTT+AGG | 0.303206 | 5_4:+1900101 | None:intergenic |
| AGCAACGAACTCAGCAATAT+TGG | 0.316090 | 5_4:+1903676 | None:intergenic |
| TGCTAAAACACCATATATTA+AGG | 0.317069 | 5_4:-1900242 | Msa0828950:CDS |
| AGTTTAATCAAATATGGATT+TGG | 0.320782 | 5_4:-1901070 | Msa0828950:exon |
| TATAAACAAGTCAAACTAAA+TGG | 0.330642 | 5_4:+1899497 | None:intergenic |
| ATACTACTAATATGATTAGA+TGG | 0.332584 | 5_4:+1904019 | None:intergenic |
| GTGATAATCAAGTTAGAAAA+AGG | 0.339715 | 5_4:-1900322 | Msa0828950:CDS |
| AGGAAAATCTTTATCCGTTA+AGG | 0.342094 | 5_4:+1900195 | None:intergenic |
| TACCTATTGGAGGTGTTTCA+TGG | 0.356456 | 5_4:-1900546 | Msa0828950:CDS |
| ATGGTGGTGGTTACTACATT+TGG | 0.379198 | 5_4:-1901008 | Msa0828950:CDS |
| ATACAACTCTACCCACCATT+TGG | 0.381031 | 5_4:+1899359 | None:intergenic |
| ATAGAAATTGTGGGATTGAA+TGG | 0.390973 | 5_4:-1900049 | Msa0828950:CDS |
| CCACTCATAAGAAATTTATT+GGG | 0.391366 | 5_4:+1899465 | None:intergenic |
| GAAGGTGCCTTAATAGCATT+AGG | 0.400052 | 5_4:+1900127 | None:intergenic |
| CATAAACAAAGTCTTTAGTT+AGG | 0.401436 | 5_4:+1900272 | None:intergenic |
| TCCCATGTTGTAAGCATGAT+TGG | 0.402393 | 5_4:+1904062 | None:intergenic |
| ACTTCAATAGCTCATGTTCC+AGG | 0.412111 | 5_4:-1900475 | Msa0828950:CDS |
| ATTTACATTGCTAGAGGAAG+TGG | 0.419131 | 5_4:-1900076 | Msa0828950:CDS |
| GCTAAAGTTGCTGGTGAAGA+AGG | 0.419914 | 5_4:-1899959 | Msa0828950:CDS |
| ACCTATGCCTAAGCCACAAT+TGG | 0.420447 | 5_4:-1900296 | Msa0828950:CDS |
| CCCAATAAATTTCTTATGAG+TGG | 0.423152 | 5_4:-1899465 | Msa0828950:three_prime_UTR |
| AAGTTCTCAAGTTCAAGTTT+TGG | 0.426929 | 5_4:-1900983 | Msa0828950:CDS |
| TACAACTCTACCCACCATTT+GGG | 0.435680 | 5_4:+1899360 | None:intergenic |
| TAGCCGGAGAGACATCAGTA+TGG | 0.435918 | 5_4:-1899626 | Msa0828950:CDS |
| GCAGGGACTGATGGCGTAGT+TGG | 0.443394 | 5_4:-1900634 | Msa0828950:intron |
| ATTAATAAACCCTTCCCAAA+TGG | 0.445272 | 5_4:-1899374 | Msa0828950:three_prime_UTR |
| CCAGGGGTAGTTAGGGTTGA+AGG | 0.458140 | 5_4:+1900109 | None:intergenic |
| CTGAATCCCAGGGGTAGTTA+GGG | 0.459551 | 5_4:+1900102 | None:intergenic |
| GTTAGGTCCAATTGTGGCTT+AGG | 0.462868 | 5_4:+1900289 | None:intergenic |
| CCTTCAACCCTAACTACCCC+TGG | 0.463501 | 5_4:-1900109 | Msa0828950:CDS |
| GTCAACTTGTTCTTCAGCCA+AGG | 0.466314 | 5_4:-1900939 | Msa0828950:CDS |
| AGCAATGGTTGTGCTGTCTT+CGG | 0.471177 | 5_4:+1901039 | None:intergenic |
| ATTACGCTTTGTAGAAAAGT+CGG | 0.476078 | 5_4:-1903637 | Msa0828950:intron |
| TTACGCTTTGTAGAAAAGTC+GGG | 0.479463 | 5_4:-1903636 | Msa0828950:intron |
| GATGTCATACCTGTACCTAT+TGG | 0.485348 | 5_4:-1900559 | Msa0828950:CDS |
| TGTCTTGGATGCTCAAGTTA+AGG | 0.494376 | 5_4:-1900020 | Msa0828950:CDS |
| AAAGTGGGTTATGTCATAGA+AGG | 0.498483 | 5_4:-1900883 | Msa0828950:intron |
| GGGATTAGTCACGACCTTAA+CGG | 0.507459 | 5_4:-1900209 | Msa0828950:CDS |
| CACCATGAAACACCTCCAAT+AGG | 0.508936 | 5_4:+1900544 | None:intergenic |
| ATGTAAATCAACTGAATCCC+AGG | 0.510868 | 5_4:+1900091 | None:intergenic |
| GAGAATAAGCCTCTCATGGT+TGG | 0.528668 | 5_4:+1899229 | None:intergenic |
| AGCCGGAGAGACATCAGTAT+GGG | 0.531399 | 5_4:-1899625 | Msa0828950:CDS |
| AATAAACCCTTCCCAAATGG+TGG | 0.531487 | 5_4:-1899371 | Msa0828950:three_prime_UTR |
| AACAAGTCAAACTAAATGGT+AGG | 0.531603 | 5_4:+1899501 | None:intergenic |
| AAAGACACTTGTTGCACAGT+AGG | 0.532747 | 5_4:+1899591 | None:intergenic |
| GTTTCATGGTGGTTCAATGA+TGG | 0.534589 | 5_4:-1900532 | Msa0828950:CDS |
| CAACCATTGCTTGAGGGAGA+TGG | 0.544530 | 5_4:-1901027 | Msa0828950:CDS |
| GACTGATGGCGTAGTTGGAA+TGG | 0.544651 | 5_4:-1900629 | Msa0828950:CDS |
| GCTAAGACCAATGTTGGTGC+TGG | 0.545292 | 5_4:-1900961 | Msa0828950:CDS |
| TCAACTTGTTCTTCAGCCAA+GGG | 0.545644 | 5_4:-1900938 | Msa0828950:CDS |
| ATTGAATGGAAAACGTGTCT+TGG | 0.545710 | 5_4:-1900035 | Msa0828950:CDS |
| TTGGCAAACGCAGGGACTGA+TGG | 0.551265 | 5_4:-1900643 | Msa0828950:intron |
| CTCTACCCACCATTTGGGAA+GGG | 0.551588 | 5_4:+1899365 | None:intergenic |
| TTGGATGCTCAAGTTAAGGC+TGG | 0.552687 | 5_4:-1900016 | Msa0828950:CDS |
| TACTACTAATATGATTAGAT+GGG | 0.552892 | 5_4:+1904020 | None:intergenic |
| TTGTTCGAATCTGCATAATG+AGG | 0.553966 | 5_4:+1900904 | None:intergenic |
| CCTTTGTTTGAAGAGTTAGC+CGG | 0.556322 | 5_4:-1899642 | Msa0828950:CDS |
| GTCATACCTGTACCTATTGG+AGG | 0.560557 | 5_4:-1900556 | Msa0828950:CDS |
| CATAGAGAATAAGCCTCTCA+TGG | 0.562142 | 5_4:+1899225 | None:intergenic |
| TCCAATTGTGGCTTAGGCAT+AGG | 0.563240 | 5_4:+1900295 | None:intergenic |
| TTGCTTGAGGGAGATGGTGG+TGG | 0.563550 | 5_4:-1901021 | Msa0828950:CDS |
| TCCAATCATGCTTACAACAT+GGG | 0.564046 | 5_4:-1904063 | Msa0828950:five_prime_UTR |
| TCCCCATACTGATGTCTCTC+CGG | 0.565683 | 5_4:+1899623 | None:intergenic |
| GGAATGGTACTCCCCAGCAC+TGG | 0.566146 | 5_4:-1900613 | Msa0828950:CDS |
| ATATATTAAGGCCCAAAATG+TGG | 0.568201 | 5_4:-1900230 | Msa0828950:CDS |
| ACAGCACAACCATTGCTTGA+GGG | 0.569100 | 5_4:-1901033 | Msa0828950:CDS |
| AAAGTCCTTGAACACCACTT+AGG | 0.569759 | 5_4:+1900434 | None:intergenic |
| AGTTGCTGGTGAAGAAGGAA+TGG | 0.570497 | 5_4:-1899954 | Msa0828950:CDS |
| GAAACACCTCCAATAGGTAC+AGG | 0.571470 | 5_4:+1900550 | None:intergenic |
| ACAAGTCAAACTAAATGGTA+GGG | 0.575189 | 5_4:+1899502 | None:intergenic |
| TCTTTAGTTAGGTCCAATTG+TGG | 0.584862 | 5_4:+1900283 | None:intergenic |
| ACTCTACCCACCATTTGGGA+AGG | 0.584895 | 5_4:+1899364 | None:intergenic |
| ATCCAATCATGCTTACAACA+TGG | 0.590309 | 5_4:-1904064 | Msa0828950:five_prime_UTR |
| TATATTAAGGCCCAAAATGT+GGG | 0.592612 | 5_4:-1900229 | Msa0828950:CDS |
| CAGTTGATTTACATTGCTAG+AGG | 0.600562 | 5_4:-1900082 | Msa0828950:CDS |
| CTTCAACCCTAACTACCCCT+GGG | 0.606286 | 5_4:-1900108 | Msa0828950:CDS |
| CCACCATCTCCCTCAAGCAA+TGG | 0.609709 | 5_4:+1901024 | None:intergenic |
| TGAGGAAGAGCAAATCCCCT+TGG | 0.612076 | 5_4:+1900922 | None:intergenic |
| TATGCAGATTCGAACAAAGT+GGG | 0.614043 | 5_4:-1900898 | Msa0828950:CDS |
| TGTAAATCAACTGAATCCCA+GGG | 0.616370 | 5_4:+1900092 | None:intergenic |
| ATAAACCCTTCCCAAATGGT+GGG | 0.621623 | 5_4:-1899370 | Msa0828950:three_prime_UTR |
| CATGGACATCCAACCATGAG+AGG | 0.623434 | 5_4:-1899238 | Msa0828950:three_prime_UTR |
| GGTAGGGAGAATGAGACTTG+TGG | 0.625569 | 5_4:+1899518 | None:intergenic |
| TTATGCAGATTCGAACAAAG+TGG | 0.626214 | 5_4:-1900899 | Msa0828950:CDS |
| CAACTTGTTCTTCAGCCAAG+GGG | 0.631432 | 5_4:-1900937 | Msa0828950:CDS |
| ATGTGAATTGTGAAACGACA+TGG | 0.633456 | 5_4:-1899256 | Msa0828950:three_prime_UTR |
| AAGTTGACCAGCACCAACAT+TGG | 0.633587 | 5_4:+1900954 | None:intergenic |
| CCGGCTAACTCTTCAAACAA+AGG | 0.634501 | 5_4:+1899642 | None:intergenic |
| GACAGCACAACCATTGCTTG+AGG | 0.639965 | 5_4:-1901034 | Msa0828950:CDS |
| CTATTGGAGGTGTTTCATGG+TGG | 0.653727 | 5_4:-1900543 | Msa0828950:CDS |
| TGTATGTCATGATGTTACAC+AGG | 0.654240 | 5_4:-1899341 | Msa0828950:three_prime_UTR |
| CCATTGCTTGAGGGAGATGG+TGG | 0.656696 | 5_4:-1901024 | Msa0828950:CDS |
| CGTGAATGCGTTGAAGACTG+AGG | 0.665241 | 5_4:+1903714 | None:intergenic |
| TTGTTGCACAGTAGGTGACA+AGG | 0.665977 | 5_4:+1899599 | None:intergenic |
| GCCGGAGAGACATCAGTATG+GGG | 0.687095 | 5_4:-1899624 | Msa0828950:CDS |
| GTGAATGCGTTGAAGACTGA+GGG | 0.696537 | 5_4:+1903715 | None:intergenic |
| GTAAATCAACTGAATCCCAG+GGG | 0.756773 | 5_4:+1900093 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAACTATTTTTTTTTTTTT+TGG | - | chr5_4:1899441-1899460 | Msa0828950:three_prime_UTR | 10.0% |
| !!! | TATATTGAGTTTTTTTTTTA+AGG | + | chr5_4:1901624-1901643 | None:intergenic | 10.0% |
| !! | TTAAAAAAAAAACTCAATAT+AGG | - | chr5_4:1901623-1901642 | Msa0828950:intron | 10.0% |
| !!! | AATTAATTTGTAAATTGAAA+TGG | - | chr5_4:1902148-1902167 | Msa0828950:intron | 10.0% |
| !!! | TTTTTTTTATTGAATATGTA+TGG | - | chr5_4:1903826-1903845 | Msa0828950:intron | 10.0% |
| !! | CGATAATTAAAATTTATTAA+TGG | + | chr5_4:1903953-1903972 | None:intergenic | 10.0% |
| !!! | CGTTGTAATTAAATTTTTTT+AGG | + | chr5_4:1899489-1899508 | None:intergenic | 15.0% |
| !! | TAAACAAAATGATTTATGTT+TGG | - | chr5_4:1899814-1899833 | Msa0828950:intron | 15.0% |
| !! | AAATTGTAAAAATGATTCTA+AGG | - | chr5_4:1900575-1900594 | Msa0828950:CDS | 15.0% |
| !! | AATAAATGAAGAATAATTTG+AGG | + | chr5_4:1900874-1900893 | None:intergenic | 15.0% |
| !!! | ATGTATTATTTTCTATAACA+TGG | - | chr5_4:1901336-1901355 | Msa0828950:intron | 15.0% |
| !! | TTAATAAAATGAATCCTATT+TGG | - | chr5_4:1901476-1901495 | Msa0828950:intron | 15.0% |
| !! | AATATTATAGATCTAATGTA+GGG | + | chr5_4:1901842-1901861 | None:intergenic | 15.0% |
| !! | AAATATTATAGATCTAATGT+AGG | + | chr5_4:1901843-1901862 | None:intergenic | 15.0% |
| !! | AATACATTTACATTATCATT+AGG | - | chr5_4:1901976-1901995 | Msa0828950:intron | 15.0% |
| !!! | ATACAATTTTAATAAAGATG+AGG | - | chr5_4:1902889-1902908 | Msa0828950:intron | 15.0% |
| !!! | TAAAGATTTTCCTTTTATTA+AGG | - | chr5_4:1903081-1903100 | Msa0828950:intron | 15.0% |
| !! | TACTACTAATATGATTAGAT+GGG | + | chr5_4:1899249-1899268 | None:intergenic | 20.0% |
| !! | ATACTACTAATATGATTAGA+TGG | + | chr5_4:1899250-1899269 | None:intergenic | 20.0% |
| !! | ATCTAATCATATTAGTAGTA+TGG | - | chr5_4:1899249-1899268 | Msa0828950:three_prime_UTR | 20.0% |
| !! | AAGACAAAATTTCTCTTTAT+AGG | - | chr5_4:1899381-1899400 | Msa0828950:three_prime_UTR | 20.0% |
| !! | TAAAGAATGAGAATTGATAA+AGG | - | chr5_4:1899904-1899923 | Msa0828950:intron | 20.0% |
| !! | AAAGAATGAGAATTGATAAA+GGG | - | chr5_4:1899905-1899924 | Msa0828950:intron | 20.0% |
| !! | CAAGAAAAAGTTAGAAAATT+AGG | + | chr5_4:1900416-1900435 | None:intergenic | 20.0% |
| !!! | TTTTTCCAAAATTTGAAACT+TGG | + | chr5_4:1900624-1900643 | None:intergenic | 20.0% |
| !!! | TAGCTAGAACATTTTTTAAA+AGG | + | chr5_4:1900702-1900721 | None:intergenic | 20.0% |
| !! | ACACACAAATTGTTTATAAA+TGG | + | chr5_4:1901046-1901065 | None:intergenic | 20.0% |
| !!! | TGCTGAAATAATAATGTTTT+GGG | + | chr5_4:1901683-1901702 | None:intergenic | 20.0% |
| !!! | ATGCTGAAATAATAATGTTT+TGG | + | chr5_4:1901684-1901703 | None:intergenic | 20.0% |
| !! | CACAATTATAAACAAAAAAG+TGG | - | chr5_4:1901723-1901742 | Msa0828950:intron | 20.0% |
| !! | TTAGATCTATAATATTTGTG+AGG | - | chr5_4:1901846-1901865 | Msa0828950:intron | 20.0% |
| !! | TGGTAAAAAAAAACTAATAG+TGG | - | chr5_4:1901873-1901892 | Msa0828950:intron | 20.0% |
| !! | GGTAAAAAAAAACTAATAGT+GGG | - | chr5_4:1901874-1901893 | Msa0828950:intron | 20.0% |
| !! | GTAAAAAAAAACTAATAGTG+GGG | - | chr5_4:1901875-1901894 | Msa0828950:intron | 20.0% |
| !!! | TGATAATGTAAATGTATTAG+TGG | + | chr5_4:1901974-1901993 | None:intergenic | 20.0% |
| !!! | ATTGCTTTTTGAACTAAAAA+AGG | - | chr5_4:1902116-1902135 | Msa0828950:intron | 20.0% |
| !!! | TAAATTGAAATGGTTTTTTC+AGG | - | chr5_4:1902158-1902177 | Msa0828950:intron | 20.0% |
| !! | AGAAGAAGTTTAATCAAATA+TGG | - | chr5_4:1902190-1902209 | Msa0828950:intron | 20.0% |
| !! | AGTTTAATCAAATATGGATT+TGG | - | chr5_4:1902196-1902215 | Msa0828950:intron | 20.0% |
| !! | GATCTTAACATTATATTTCT+TGG | - | chr5_4:1902764-1902783 | Msa0828950:intron | 20.0% |
| !! | TTAGCAAAAACAAAAAAATG+TGG | + | chr5_4:1903292-1903311 | None:intergenic | 20.0% |
| !!! | TTTTGATTCACAAATCAATT+TGG | - | chr5_4:1903503-1903522 | Msa0828950:intron | 20.0% |
| !!! | ATTTGAAATTATTTTCGATC+TGG | - | chr5_4:1903537-1903556 | Msa0828950:intron | 20.0% |
| !! | TATAAACAAGTCAAACTAAA+TGG | + | chr5_4:1903772-1903791 | None:intergenic | 20.0% |
| ! | ATGCTTAAACAATGTCTTAA+GGG | + | chr5_4:1899291-1899310 | None:intergenic | 25.0% |
| !! | TTTATAAAGCGTGTTTTACT+GGG | + | chr5_4:1899515-1899534 | None:intergenic | 25.0% |
| !! | TGAGAGAATTGATTTATGTT+TGG | - | chr5_4:1899770-1899789 | Msa0828950:intron | 25.0% |
| ! | ACTAAAATAGACATAGCTAA+AGG | - | chr5_4:1899873-1899892 | Msa0828950:intron | 25.0% |
| ! | GTGCAAATATAAAATTTGAG+GGG | + | chr5_4:1900394-1900413 | None:intergenic | 25.0% |
| ! | GGTGCAAATATAAAATTTGA+GGG | + | chr5_4:1900395-1900414 | None:intergenic | 25.0% |
| ! | AGGTGCAAATATAAAATTTG+AGG | + | chr5_4:1900396-1900415 | None:intergenic | 25.0% |
| !!! | TTCATAGTTAAATTTTCAGG+GGG | + | chr5_4:1900445-1900464 | None:intergenic | 25.0% |
| !! | GTTCATAGTTAAATTTTCAG+GGG | + | chr5_4:1900446-1900465 | None:intergenic | 25.0% |
| !! | GGTTCATAGTTAAATTTTCA+GGG | + | chr5_4:1900447-1900466 | None:intergenic | 25.0% |
| ! | AAACAAAATGTAATGTATGG+TGG | + | chr5_4:1900506-1900525 | None:intergenic | 25.0% |
| ! | GTCAAACAAAATGTAATGTA+TGG | + | chr5_4:1900509-1900528 | None:intergenic | 25.0% |
| ! | TGTTTATAAATGGTTAGATC+AGG | + | chr5_4:1901036-1901055 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGCTGTTAACAC+TGG | + | chr5_4:1901097-1901116 | None:intergenic | 25.0% |
| !! | ACAGTTTGAGTTATACATAT+AGG | - | chr5_4:1901236-1901255 | Msa0828950:intron | 25.0% |
| !!! | TTTTTAAGCGTTGAGTTAAT+TGG | - | chr5_4:1901378-1901397 | Msa0828950:intron | 25.0% |
| !!! | TTTGTTAGTTTGTTAAAGAC+AGG | + | chr5_4:1901586-1901605 | None:intergenic | 25.0% |
| ! | TATAATATTTGTGAGGAGAT+TGG | - | chr5_4:1901853-1901872 | Msa0828950:intron | 25.0% |
| ! | AGTTAGTATATATTGTGTGT+TGG | - | chr5_4:1902075-1902094 | Msa0828950:intron | 25.0% |
| ! | TTATCTAAATGATGATCTCT+TGG | - | chr5_4:1902448-1902467 | Msa0828950:intron | 25.0% |
| ! | ATCACTTATTTGGTCAAATT+TGG | - | chr5_4:1902604-1902623 | Msa0828950:intron | 25.0% |
| ! | AAAAAATAAGTGAATTCTCC+TGG | + | chr5_4:1902812-1902831 | None:intergenic | 25.0% |
| !!! | TTCACTTATTTTTTCCTAAG+TGG | - | chr5_4:1902818-1902837 | Msa0828950:intron | 25.0% |
| ! | GTGATAATCAAGTTAGAAAA+AGG | - | chr5_4:1902944-1902963 | Msa0828950:intron | 25.0% |
| ! | CATAAACAAAGTCTTTAGTT+AGG | + | chr5_4:1902997-1903016 | None:intergenic | 25.0% |
| ! | TGCTAAAACACCATATATTA+AGG | - | chr5_4:1903024-1903043 | Msa0828950:intron | 25.0% |
| !! | TTTCCTTTTATTAAGGATGT+TGG | - | chr5_4:1903088-1903107 | Msa0828950:intron | 25.0% |
| !! | TTCCTTTTATTAAGGATGTT+GGG | - | chr5_4:1903089-1903108 | Msa0828950:intron | 25.0% |
| ! | AAGTGGAAAAATAGAAATTG+TGG | - | chr5_4:1903207-1903226 | Msa0828950:intron | 25.0% |
| ! | AGTGGAAAAATAGAAATTGT+GGG | - | chr5_4:1903208-1903227 | Msa0828950:intron | 25.0% |
| ! | CCACTCATAAGAAATTTATT+GGG | + | chr5_4:1903804-1903823 | None:intergenic | 25.0% |
| ! | TCCACTCATAAGAAATTTAT+TGG | + | chr5_4:1903805-1903824 | None:intergenic | 25.0% |
| ! | TGTATGGAATTCATGTAATA+AGG | - | chr5_4:1903842-1903861 | Msa0828950:intron | 25.0% |
| GATGCTTAAACAATGTCTTA+AGG | + | chr5_4:1899292-1899311 | None:intergenic | 30.0% | |
| TTTCTCTTTATAGGTTCCTT+AGG | - | chr5_4:1899390-1899409 | Msa0828950:three_prime_UTR | 30.0% | |
| TTCTCTTTATAGGTTCCTTA+GGG | - | chr5_4:1899391-1899410 | Msa0828950:three_prime_UTR | 30.0% | |
| ! | CTTTATAAAGCGTGTTTTAC+TGG | + | chr5_4:1899516-1899535 | None:intergenic | 30.0% |
| ATTACGCTTTGTAGAAAAGT+CGG | - | chr5_4:1899629-1899648 | Msa0828950:CDS | 30.0% | |
| ATATTCAAAGCTGAACCAAA+CGG | + | chr5_4:1899696-1899715 | None:intergenic | 30.0% | |
| !!! | TTTTTGGCTAGAATTGCTTT+TGG | - | chr5_4:1900091-1900110 | Msa0828950:CDS | 30.0% |
| !! | CACTGTAGAGAATTGATTTT+GGG | - | chr5_4:1900114-1900133 | Msa0828950:CDS | 30.0% |
| !! | AGACTTTTCTGGAAAATACT+TGG | + | chr5_4:1900305-1900324 | None:intergenic | 30.0% |
| CAGGTATATACTATATACCA+GGG | - | chr5_4:1900332-1900351 | Msa0828950:CDS | 30.0% | |
| TATATACTATATACCAGGGA+CGG | - | chr5_4:1900336-1900355 | Msa0828950:CDS | 30.0% | |
| ! | GGGTTCATAGTTAAATTTTC+AGG | + | chr5_4:1900448-1900467 | None:intergenic | 30.0% |
| ! | TGACACCAAGTTTCAAATTT+TGG | - | chr5_4:1900616-1900635 | Msa0828950:CDS | 30.0% |
| CTCAAATGATAGAGATATTG+CGG | - | chr5_4:1900836-1900855 | Msa0828950:intron | 30.0% | |
| ! | TTGACATTGATGGTTAAATC+AGG | + | chr5_4:1900970-1900989 | None:intergenic | 30.0% |
| CTTATCAATCTTGACATTGA+TGG | + | chr5_4:1900980-1900999 | None:intergenic | 30.0% | |
| AAAATGAATCCTATTTGGCA+AGG | - | chr5_4:1901481-1901500 | Msa0828950:intron | 30.0% | |
| TACGGATGGATAACTAAATA+AGG | - | chr5_4:1901513-1901532 | Msa0828950:intron | 30.0% | |
| GATGGATAACTAAATAAGGA+AGG | - | chr5_4:1901517-1901536 | Msa0828950:intron | 30.0% | |
| !! | GATCTAATGTAGGGTATTTT+TGG | + | chr5_4:1901833-1901852 | None:intergenic | 30.0% |
| TACTAACTTTCACACTTGTT+AGG | + | chr5_4:1902063-1902082 | None:intergenic | 30.0% | |
| TAGTATATATTGTGTGTTGG+AGG | - | chr5_4:1902078-1902097 | Msa0828950:intron | 30.0% | |
| !! | AAGTTCTCAAGTTCAAGTTT+TGG | - | chr5_4:1902283-1902302 | Msa0828950:intron | 30.0% |
| GTATCACAACATCACTTATT+TGG | - | chr5_4:1902594-1902613 | Msa0828950:intron | 30.0% | |
| !!! | GTTGTTTTGAAGCTTAAGAA+AGG | - | chr5_4:1902683-1902702 | Msa0828950:intron | 30.0% |
| ! | ACATTTTGGGCCTTAATATA+TGG | + | chr5_4:1903037-1903056 | None:intergenic | 30.0% |
| ATATATTAAGGCCCAAAATG+TGG | - | chr5_4:1903036-1903055 | Msa0828950:intron | 30.0% | |
| TATATTAAGGCCCAAAATGT+GGG | - | chr5_4:1903037-1903056 | Msa0828950:intron | 30.0% | |
| AGGAAAATCTTTATCCGTTA+AGG | + | chr5_4:1903074-1903093 | None:intergenic | 30.0% | |
| AACCCAACATCCTTAATAAA+AGG | + | chr5_4:1903094-1903113 | None:intergenic | 30.0% | |
| ACTTGAACCTAATGCTATTA+AGG | - | chr5_4:1903132-1903151 | Msa0828950:intron | 30.0% | |
| ATAGAAATTGTGGGATTGAA+TGG | - | chr5_4:1903217-1903236 | Msa0828950:intron | 30.0% | |
| !!! | TTTGTTTTTGCTAAAGTTGC+TGG | - | chr5_4:1903298-1903317 | Msa0828950:intron | 30.0% |
| ! | GTTTAAAACTCCAACTTACT+TGG | + | chr5_4:1903362-1903381 | None:intergenic | 30.0% |
| ACAAGTCAAACTAAATGGTA+GGG | + | chr5_4:1903767-1903786 | None:intergenic | 30.0% | |
| AACAAGTCAAACTAAATGGT+AGG | + | chr5_4:1903768-1903787 | None:intergenic | 30.0% | |
| CCCAATAAATTTCTTATGAG+TGG | - | chr5_4:1903801-1903820 | Msa0828950:five_prime_UTR | 30.0% | |
| ATTAATAAACCCTTCCCAAA+TGG | - | chr5_4:1903892-1903911 | Msa0828950:intron | 30.0% | |
| ATCCAATCATGCTTACAACA+TGG | - | chr5_4:1899202-1899221 | Msa0828950:three_prime_UTR | 35.0% | |
| TCCAATCATGCTTACAACAT+GGG | - | chr5_4:1899203-1899222 | Msa0828950:three_prime_UTR | 35.0% | |
| TTACGCTTTGTAGAAAAGTC+GGG | - | chr5_4:1899630-1899649 | Msa0828950:CDS | 35.0% | |
| TATTCAAAGCTGAACCAAAC+GGG | + | chr5_4:1899695-1899714 | None:intergenic | 35.0% | |
| AAACCTATACACGTTGTTCA+AGG | - | chr5_4:1899967-1899986 | Msa0828950:CDS | 35.0% | |
| AGCTAGAATTTGTAGCTTCA+TGG | - | chr5_4:1900014-1900033 | Msa0828950:CDS | 35.0% | |
| !! | TGAACCAAACACGTTGTTTT+TGG | - | chr5_4:1900075-1900094 | Msa0828950:CDS | 35.0% |
| !! | GCACTGTAGAGAATTGATTT+TGG | - | chr5_4:1900113-1900132 | Msa0828950:CDS | 35.0% |
| ACAACACATACAACACATCT+GGG | - | chr5_4:1900221-1900240 | Msa0828950:CDS | 35.0% | |
| ATTAAATCTGGACCACACAA+AGG | + | chr5_4:1900262-1900281 | None:intergenic | 35.0% | |
| GTGGTCCAGATTTAATATCA+CGG | - | chr5_4:1900266-1900285 | Msa0828950:CDS | 35.0% | |
| GCAGGTATATACTATATACC+AGG | - | chr5_4:1900331-1900350 | Msa0828950:CDS | 35.0% | |
| ATATACTATATACCAGGGAC+GGG | - | chr5_4:1900337-1900356 | Msa0828950:CDS | 35.0% | |
| AGTGAAAGAGAAAAGACAGA+GGG | + | chr5_4:1900468-1900487 | None:intergenic | 35.0% | |
| ! | AGCTAGATCGTTTGATGATA+TGG | - | chr5_4:1900654-1900673 | Msa0828950:intron | 35.0% |
| AATCAGGCTCTCTATCATAT+GGG | + | chr5_4:1900954-1900973 | None:intergenic | 35.0% | |
| AAATCAGGCTCTCTATCATA+TGG | + | chr5_4:1900955-1900974 | None:intergenic | 35.0% | |
| CATAGTAGTATATACTGCAG+TGG | + | chr5_4:1901152-1901171 | None:intergenic | 35.0% | |
| GGAAAAGAACACAAATTACG+TGG | - | chr5_4:1901538-1901557 | Msa0828950:intron | 35.0% | |
| TAAAGACAGGAACAAATTCC+TGG | + | chr5_4:1901573-1901592 | None:intergenic | 35.0% | |
| ! | AAAGTGTTTAGATTCTGCTG+AGG | - | chr5_4:1901648-1901667 | Msa0828950:intron | 35.0% |
| AGCATAAATACATTCTGCTG+AGG | - | chr5_4:1901699-1901718 | Msa0828950:intron | 35.0% | |
| CATTATCATTAGGAGTAAGC+TGG | - | chr5_4:1901986-1902005 | Msa0828950:intron | 35.0% | |
| ! | TTCACACTTGTTAGGATGAT+AGG | + | chr5_4:1902055-1902074 | None:intergenic | 35.0% |
| !!! | ATGGTTTTTTCAGGAGCAAA+AGG | - | chr5_4:1902167-1902186 | Msa0828950:intron | 35.0% |
| TTGTTCGAATCTGCATAATG+AGG | + | chr5_4:1902365-1902384 | None:intergenic | 35.0% | |
| TTATGCAGATTCGAACAAAG+TGG | - | chr5_4:1902367-1902386 | Msa0828950:intron | 35.0% | |
| TATGCAGATTCGAACAAAGT+GGG | - | chr5_4:1902368-1902387 | Msa0828950:intron | 35.0% | |
| !! | AAAGTGGGTTATGTCATAGA+AGG | - | chr5_4:1902383-1902402 | Msa0828950:intron | 35.0% |
| ! | TTTTTCCTAAGTGGTGTTCA+AGG | - | chr5_4:1902827-1902846 | Msa0828950:intron | 35.0% |
| AAGCTAACACAAAGCCAAAA+AGG | - | chr5_4:1902917-1902936 | Msa0828950:intron | 35.0% | |
| AGCTAACACAAAGCCAAAAA+GGG | - | chr5_4:1902918-1902937 | Msa0828950:intron | 35.0% | |
| ! | TGATTATCACAACCCCTTTT+TGG | + | chr5_4:1902934-1902953 | None:intergenic | 35.0% |
| TCTTTAGTTAGGTCCAATTG+TGG | + | chr5_4:1902986-1903005 | None:intergenic | 35.0% | |
| ATGTTGGGTTAAGTGTGATT+AGG | - | chr5_4:1903104-1903123 | Msa0828950:intron | 35.0% | |
| TGTTGGGTTAAGTGTGATTA+GGG | - | chr5_4:1903105-1903124 | Msa0828950:intron | 35.0% | |
| TGTAAATCAACTGAATCCCA+GGG | + | chr5_4:1903177-1903196 | None:intergenic | 35.0% | |
| ATGTAAATCAACTGAATCCC+AGG | + | chr5_4:1903178-1903197 | None:intergenic | 35.0% | |
| ! | CAGTTGATTTACATTGCTAG+AGG | - | chr5_4:1903184-1903203 | Msa0828950:intron | 35.0% |
| ATTTACATTGCTAGAGGAAG+TGG | - | chr5_4:1903190-1903209 | Msa0828950:intron | 35.0% | |
| ATTGAATGGAAAACGTGTCT+TGG | - | chr5_4:1903231-1903250 | Msa0828950:intron | 35.0% | |
| TGTATGTCATGATGTTACAC+AGG | - | chr5_4:1903925-1903944 | Msa0828950:intron | 35.0% | |
| ATGTGAATTGTGAAACGACA+TGG | - | chr5_4:1904010-1904029 | Msa0828950:intron | 35.0% | |
| TCCCATGTTGTAAGCATGAT+TGG | + | chr5_4:1899207-1899226 | None:intergenic | 40.0% | |
| TCTTACTAACAAGTGCCCTA+AGG | + | chr5_4:1899409-1899428 | None:intergenic | 40.0% | |
| AGCAACGAACTCAGCAATAT+TGG | + | chr5_4:1899593-1899612 | None:intergenic | 40.0% | |
| TCTCCTTGAACAACGTGTAT+AGG | + | chr5_4:1899973-1899992 | None:intergenic | 40.0% | |
| ! | GCTTCATGGAGAATTGCTTT+TGG | - | chr5_4:1900028-1900047 | Msa0828950:CDS | 40.0% |
| !! | TCATGGAGAATTGCTTTTGG+AGG | - | chr5_4:1900031-1900050 | Msa0828950:CDS | 40.0% |
| CTAGCCAAAAACAACGTGTT+TGG | + | chr5_4:1900082-1900101 | None:intergenic | 40.0% | |
| TATTGTGTGACCCGGATTTA+GGG | + | chr5_4:1900174-1900193 | None:intergenic | 40.0% | |
| GATGTGTTGTATGTGTTGTG+TGG | + | chr5_4:1900220-1900239 | None:intergenic | 40.0% | |
| CACAACACATACAACACATC+TGG | - | chr5_4:1900220-1900239 | Msa0828950:CDS | 40.0% | |
| CGTCACCGTGATATTAAATC+TGG | + | chr5_4:1900274-1900293 | None:intergenic | 40.0% | |
| CAGTGAAAGAGAAAAGACAG+AGG | + | chr5_4:1900469-1900488 | None:intergenic | 40.0% | |
| !! | GAAACTTGGTGTCATGTGTT+GGG | + | chr5_4:1900610-1900629 | None:intergenic | 40.0% |
| !! | TGAAACTTGGTGTCATGTGT+TGG | + | chr5_4:1900611-1900630 | None:intergenic | 40.0% |
| ! | CATCAAACGATCTAGCTTAG+TGG | + | chr5_4:1900651-1900670 | None:intergenic | 40.0% |
| ATCAGGCTCTCTATCATATG+GGG | + | chr5_4:1900953-1900972 | None:intergenic | 40.0% | |
| ! | TCGAGCATCAGCTTAACTTT+TGG | - | chr5_4:1901270-1901289 | Msa0828950:intron | 40.0% |
| ! | CGAGCATCAGCTTAACTTTT+GGG | - | chr5_4:1901271-1901290 | Msa0828950:intron | 40.0% |
| ! | ATGCATGCAGAAGCATGAAT+AGG | - | chr5_4:1901402-1901421 | Msa0828950:intron | 40.0% |
| GTGGCAGTGTGTTTATAGTA+AGG | + | chr5_4:1901955-1901974 | None:intergenic | 40.0% | |
| TATATTGTGTGTTGGAGGAG+TGG | - | chr5_4:1902083-1902102 | Msa0828950:intron | 40.0% | |
| GTTGGAGGAGTGGTATATTT+AGG | - | chr5_4:1902093-1902112 | Msa0828950:intron | 40.0% | |
| !! | ATGGTGGTGGTTACTACATT+TGG | - | chr5_4:1902258-1902277 | Msa0828950:intron | 40.0% |
| !!! | GTTTTGGCTAAGACCAATGT+TGG | - | chr5_4:1902299-1902318 | Msa0828950:intron | 40.0% |
| ! | TCAACTTGTTCTTCAGCCAA+GGG | - | chr5_4:1902328-1902347 | Msa0828950:intron | 40.0% |
| ! | ACAACTTCTTTTCCAGTGCT+GGG | + | chr5_4:1902668-1902687 | None:intergenic | 40.0% |
| ! | AACAACTTCTTTTCCAGTGC+TGG | + | chr5_4:1902669-1902688 | None:intergenic | 40.0% |
| GATGTCATACCTGTACCTAT+TGG | - | chr5_4:1902707-1902726 | Msa0828950:intron | 40.0% | |
| !! | TACCTATTGGAGGTGTTTCA+TGG | - | chr5_4:1902720-1902739 | Msa0828950:intron | 40.0% |
| GTTTCATGGTGGTTCAATGA+TGG | - | chr5_4:1902734-1902753 | Msa0828950:intron | 40.0% | |
| ACTTCAATAGCTCATGTTCC+AGG | - | chr5_4:1902791-1902810 | Msa0828950:intron | 40.0% | |
| AAAGTCCTTGAACACCACTT+AGG | + | chr5_4:1902835-1902854 | None:intergenic | 40.0% | |
| GCTAACACAAAGCCAAAAAG+GGG | - | chr5_4:1902919-1902938 | Msa0828950:intron | 40.0% | |
| ! | CGTGACTAATCCCACATTTT+GGG | + | chr5_4:1903050-1903069 | None:intergenic | 40.0% |
| ! | TCGTGACTAATCCCACATTT+TGG | + | chr5_4:1903051-1903070 | None:intergenic | 40.0% |
| !! | GAAGGTGCCTTAATAGCATT+AGG | + | chr5_4:1903142-1903161 | None:intergenic | 40.0% |
| GTAAATCAACTGAATCCCAG+GGG | + | chr5_4:1903176-1903195 | None:intergenic | 40.0% | |
| TGTCTTGGATGCTCAAGTTA+AGG | - | chr5_4:1903246-1903265 | Msa0828950:intron | 40.0% | |
| GTGACAACTACCAAGTAAGT+TGG | - | chr5_4:1903349-1903368 | Msa0828950:intron | 40.0% | |
| ! | CGATCTGGAGTACGTTATTA+AGG | - | chr5_4:1903552-1903571 | Msa0828950:intron | 40.0% |
| ! | CCTTTGTTTGAAGAGTTAGC+CGG | - | chr5_4:1903624-1903643 | Msa0828950:intron | 40.0% |
| ! | AAAGACACTTGTTGCACAGT+AGG | + | chr5_4:1903678-1903697 | None:intergenic | 40.0% |
| ! | GCAACAAGTGTCTTTTAACG+TGG | - | chr5_4:1903683-1903702 | Msa0828950:five_prime_UTR | 40.0% |
| AATAAACCCTTCCCAAATGG+TGG | - | chr5_4:1903895-1903914 | Msa0828950:intron | 40.0% | |
| ATAAACCCTTCCCAAATGGT+GGG | - | chr5_4:1903896-1903915 | Msa0828950:intron | 40.0% | |
| TACAACTCTACCCACCATTT+GGG | + | chr5_4:1903909-1903928 | None:intergenic | 40.0% | |
| ATACAACTCTACCCACCATT+TGG | + | chr5_4:1903910-1903929 | None:intergenic | 40.0% | |
| CATAGAGAATAAGCCTCTCA+TGG | + | chr5_4:1904044-1904063 | None:intergenic | 40.0% | |
| GTGAATGCGTTGAAGACTGA+GGG | + | chr5_4:1899554-1899573 | None:intergenic | 45.0% | |
| !! | TAGAAAAGTCGGGAAGCACT+TGG | - | chr5_4:1899640-1899659 | Msa0828950:CDS | 45.0% |
| !! | AGAAAAGTCGGGAAGCACTT+GGG | - | chr5_4:1899641-1899660 | Msa0828950:CDS | 45.0% |
| CAAACGGGCACTTAATGTCA+CGG | + | chr5_4:1899680-1899699 | None:intergenic | 45.0% | |
| TCTCAGAAGCCAAACCAAAC+AGG | - | chr5_4:1900148-1900167 | Msa0828950:CDS | 45.0% | |
| ! | GATTTAGGGCCTGTTTGGTT+TGG | + | chr5_4:1900160-1900179 | None:intergenic | 45.0% |
| AACCAAACAGGCCCTAAATC+CGG | - | chr5_4:1900160-1900179 | Msa0828950:CDS | 45.0% | |
| GTATTGTGTGACCCGGATTT+AGG | + | chr5_4:1900175-1900194 | None:intergenic | 45.0% | |
| GCAATGTGTATTGTGTGACC+CGG | + | chr5_4:1900182-1900201 | None:intergenic | 45.0% | |
| ACACATTGCCACACAACATC+TGG | - | chr5_4:1900193-1900212 | Msa0828950:CDS | 45.0% | |
| CACATTGCCACACAACATCT+GGG | - | chr5_4:1900194-1900213 | Msa0828950:CDS | 45.0% | |
| !! | CACAAAGGTGTTGTGTTGTG+TGG | + | chr5_4:1900247-1900266 | None:intergenic | 45.0% |
| CACAACACAACACCTTTGTG+TGG | - | chr5_4:1900247-1900266 | Msa0828950:CDS | 45.0% | |
| ! | CCTGCGATTGAAGACTTTTC+TGG | + | chr5_4:1900316-1900335 | None:intergenic | 45.0% |
| CCAGAAAAGTCTTCAATCGC+AGG | - | chr5_4:1900313-1900332 | Msa0828950:CDS | 45.0% | |
| TCAGGCTCTCTATCATATGG+GGG | + | chr5_4:1900952-1900971 | None:intergenic | 45.0% | |
| AAATTTGCATCCCCTGAGTC+AGG | - | chr5_4:1901114-1901133 | Msa0828950:intron | 45.0% | |
| AATTTGCATCCCCTGAGTCA+GGG | - | chr5_4:1901115-1901134 | Msa0828950:intron | 45.0% | |
| CGTCAATGTCCTTGCCAAAT+AGG | + | chr5_4:1901493-1901512 | None:intergenic | 45.0% | |
| TTGGCAAGGACATTGACGTA+CGG | - | chr5_4:1901495-1901514 | Msa0828950:intron | 45.0% | |
| ACAGGAACAAATTCCTGGAC+GGG | + | chr5_4:1901568-1901587 | None:intergenic | 45.0% | |
| GACAGGAACAAATTCCTGGA+CGG | + | chr5_4:1901569-1901588 | None:intergenic | 45.0% | |
| AGCAATGGTTGTGCTGTCTT+CGG | + | chr5_4:1902230-1902249 | None:intergenic | 45.0% | |
| ACAGCACAACCATTGCTTGA+GGG | - | chr5_4:1902233-1902252 | Msa0828950:intron | 45.0% | |
| AAGTTGACCAGCACCAACAT+TGG | + | chr5_4:1902315-1902334 | None:intergenic | 45.0% | |
| ! | GTCAACTTGTTCTTCAGCCA+AGG | - | chr5_4:1902327-1902346 | Msa0828950:intron | 45.0% |
| ! | CAACTTGTTCTTCAGCCAAG+GGG | - | chr5_4:1902329-1902348 | Msa0828950:intron | 45.0% |
| TGGTCAAATTTGGCAAACGC+AGG | - | chr5_4:1902614-1902633 | Msa0828950:intron | 45.0% | |
| GGTCAAATTTGGCAAACGCA+GGG | - | chr5_4:1902615-1902634 | Msa0828950:intron | 45.0% | |
| ! | CAACTTCTTTTCCAGTGCTG+GGG | + | chr5_4:1902667-1902686 | None:intergenic | 45.0% |
| GTCATACCTGTACCTATTGG+AGG | - | chr5_4:1902710-1902729 | Msa0828950:intron | 45.0% | |
| GAAACACCTCCAATAGGTAC+AGG | + | chr5_4:1902719-1902738 | None:intergenic | 45.0% | |
| CACCATGAAACACCTCCAAT+AGG | + | chr5_4:1902725-1902744 | None:intergenic | 45.0% | |
| !! | CTATTGGAGGTGTTTCATGG+TGG | - | chr5_4:1902723-1902742 | Msa0828950:intron | 45.0% |
| ACCTATGCCTAAGCCACAAT+TGG | - | chr5_4:1902970-1902989 | Msa0828950:intron | 45.0% | |
| TCCAATTGTGGCTTAGGCAT+AGG | + | chr5_4:1902974-1902993 | None:intergenic | 45.0% | |
| GTTAGGTCCAATTGTGGCTT+AGG | + | chr5_4:1902980-1902999 | None:intergenic | 45.0% | |
| !! | GGGATTAGTCACGACCTTAA+CGG | - | chr5_4:1903057-1903076 | Msa0828950:intron | 45.0% |
| TTGGATGCTCAAGTTAAGGC+TGG | - | chr5_4:1903250-1903269 | Msa0828950:intron | 45.0% | |
| GCTAAAGTTGCTGGTGAAGA+AGG | - | chr5_4:1903307-1903326 | Msa0828950:intron | 45.0% | |
| AGTTGCTGGTGAAGAAGGAA+TGG | - | chr5_4:1903312-1903331 | Msa0828950:intron | 45.0% | |
| CCGGCTAACTCTTCAAACAA+AGG | + | chr5_4:1903627-1903646 | None:intergenic | 45.0% | |
| TTGTTGCACAGTAGGTGACA+AGG | + | chr5_4:1903670-1903689 | None:intergenic | 45.0% | |
| GAGAATAAGCCTCTCATGGT+TGG | + | chr5_4:1904040-1904059 | None:intergenic | 45.0% | |
| !! | TTATATGAATTTAATAATTA+TGG | - | chr5_4:1901180-1901199 | Msa0828950:intron | 5.0% |
| !!! | TATTATAAACAAAAATTTTA+TGG | + | chr5_4:1902573-1902592 | None:intergenic | 5.0% |
| !! | TTTAAATAGAATATATTTAT+CGG | - | chr5_4:1903449-1903468 | Msa0828950:intron | 5.0% |
| CGTGAATGCGTTGAAGACTG+AGG | + | chr5_4:1899555-1899574 | None:intergenic | 50.0% | |
| CGTGACATTAAGTGCCCGTT+TGG | - | chr5_4:1899678-1899697 | Msa0828950:intron | 50.0% | |
| ACCAAACAGGCCCTAAATCC+GGG | - | chr5_4:1900161-1900180 | Msa0828950:CDS | 50.0% | |
| CAAGGACATTGACGTACGGA+TGG | - | chr5_4:1901499-1901518 | Msa0828950:intron | 50.0% | |
| GACAGCACAACCATTGCTTG+AGG | - | chr5_4:1902232-1902251 | Msa0828950:intron | 50.0% | |
| CAACCATTGCTTGAGGGAGA+TGG | - | chr5_4:1902239-1902258 | Msa0828950:intron | 50.0% | |
| GCTAAGACCAATGTTGGTGC+TGG | - | chr5_4:1902305-1902324 | Msa0828950:intron | 50.0% | |
| TGAGGAAGAGCAAATCCCCT+TGG | + | chr5_4:1902347-1902366 | None:intergenic | 50.0% | |
| ! | GACTGATGGCGTAGTTGGAA+TGG | - | chr5_4:1902637-1902656 | Msa0828950:intron | 50.0% |
| CTTCAACCCTAACTACCCCT+GGG | - | chr5_4:1903158-1903177 | Msa0828950:intron | 50.0% | |
| CTGAATCCCAGGGGTAGTTA+GGG | + | chr5_4:1903167-1903186 | None:intergenic | 50.0% | |
| ACTGAATCCCAGGGGTAGTT+AGG | + | chr5_4:1903168-1903187 | None:intergenic | 50.0% | |
| TAGCCGGAGAGACATCAGTA+TGG | - | chr5_4:1903640-1903659 | Msa0828950:five_prime_UTR | 50.0% | |
| AGCCGGAGAGACATCAGTAT+GGG | - | chr5_4:1903641-1903660 | Msa0828950:five_prime_UTR | 50.0% | |
| TCCCCATACTGATGTCTCTC+CGG | + | chr5_4:1903646-1903665 | None:intergenic | 50.0% | |
| GGTAGGGAGAATGAGACTTG+TGG | + | chr5_4:1903751-1903770 | None:intergenic | 50.0% | |
| CTCTACCCACCATTTGGGAA+GGG | + | chr5_4:1903904-1903923 | None:intergenic | 50.0% | |
| ACTCTACCCACCATTTGGGA+AGG | + | chr5_4:1903905-1903924 | None:intergenic | 50.0% | |
| CATGGACATCCAACCATGAG+AGG | - | chr5_4:1904028-1904047 | Msa0828950:five_prime_UTR | 50.0% | |
| ! | ACCCGGATTTAGGGCCTGTT+TGG | + | chr5_4:1900165-1900184 | None:intergenic | 55.0% |
| TGTGTGGCCCAGATGTTGTG+TGG | + | chr5_4:1900204-1900223 | None:intergenic | 55.0% | |
| TATACTGCAGTGGCGTTGCC+AGG | + | chr5_4:1901142-1901161 | None:intergenic | 55.0% | |
| GGAACAAATTCCTGGACGGG+TGG | + | chr5_4:1901565-1901584 | None:intergenic | 55.0% | |
| CCACCATCTCCCTCAAGCAA+TGG | + | chr5_4:1902245-1902264 | None:intergenic | 55.0% | |
| CCATTGCTTGAGGGAGATGG+TGG | - | chr5_4:1902242-1902261 | Msa0828950:intron | 55.0% | |
| ! | TTGCTTGAGGGAGATGGTGG+TGG | - | chr5_4:1902245-1902264 | Msa0828950:intron | 55.0% |
| TTGGCAAACGCAGGGACTGA+TGG | - | chr5_4:1902623-1902642 | Msa0828950:intron | 55.0% | |
| CCAGGGGTAGTTAGGGTTGA+AGG | + | chr5_4:1903160-1903179 | None:intergenic | 55.0% | |
| CCTTCAACCCTAACTACCCC+TGG | - | chr5_4:1903157-1903176 | Msa0828950:intron | 55.0% | |
| GCCGGAGAGACATCAGTATG+GGG | - | chr5_4:1903642-1903661 | Msa0828950:five_prime_UTR | 55.0% | |
| TTGCCAGGACCCTGACTCAG+GGG | + | chr5_4:1901127-1901146 | None:intergenic | 60.0% | |
| GTTGCCAGGACCCTGACTCA+GGG | + | chr5_4:1901128-1901147 | None:intergenic | 60.0% | |
| ATTACGTGGTCCACCCGTCC+AGG | - | chr5_4:1901552-1901571 | Msa0828950:intron | 60.0% | |
| ! | GCAGGGACTGATGGCGTAGT+TGG | - | chr5_4:1902632-1902651 | Msa0828950:intron | 60.0% |
| GGAATGGTACTCCCCAGCAC+TGG | - | chr5_4:1902653-1902672 | Msa0828950:intron | 60.0% | |
| TACCAGGGACGGGTCCACGT+TGG | - | chr5_4:1900347-1900366 | Msa0828950:CDS | 65.0% | |
| ACCAGGGACGGGTCCACGTT+GGG | - | chr5_4:1900348-1900367 | Msa0828950:CDS | 65.0% | |
| GGGATGCAGCTGCATCCCCT+GGG | + | chr5_4:1900376-1900395 | None:intergenic | 65.0% | |
| CATCCCCTGAGTCAGGGTCC+TGG | - | chr5_4:1901121-1901140 | Msa0828950:intron | 65.0% | |
| CGTTGCCAGGACCCTGACTC+AGG | + | chr5_4:1901129-1901148 | None:intergenic | 65.0% | |
| ACGGGTCCACGTTGGGCCCA+GGG | - | chr5_4:1900355-1900374 | Msa0828950:CDS | 70.0% | |
| TGCATCCCCTGGGCCCAACG+TGG | + | chr5_4:1900364-1900383 | None:intergenic | 70.0% | |
| GGGGATGCAGCTGCATCCCC+TGG | + | chr5_4:1900375-1900394 | None:intergenic | 70.0% | |
| GCCCAACGTGGACCCGTCCC+TGG | + | chr5_4:1900352-1900371 | None:intergenic | 75.0% | |
| GACGGGTCCACGTTGGGCCC+AGG | - | chr5_4:1900354-1900373 | Msa0828950:CDS | 75.0% | |
| CGGGTCCACGTTGGGCCCAG+GGG | - | chr5_4:1900356-1900375 | Msa0828950:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 1899199 | 1904089 | 1899199 | ID=Msa0828950;Name=Msa0828950 |
| chr5_4 | mRNA | 1899199 | 1904089 | 1899199 | ID=Msa0828950-mRNA-1;Parent=Msa0828950;Name=Msa0828950-mRNA-1;_AED=0.00;_eAED=0.00;_QI=274|1|1|1|0.5|0.4|5|313|358 |
| chr5_4 | exon | 1899199 | 1899665 | 1899199 | ID=Msa0828950-mRNA-1:exon:539;Parent=Msa0828950-mRNA-1 |
| chr5_4 | exon | 1899926 | 1900652 | 1899926 | ID=Msa0828950-mRNA-1:exon:538;Parent=Msa0828950-mRNA-1 |
| chr5_4 | exon | 1900884 | 1901102 | 1900884 | ID=Msa0828950-mRNA-1:exon:537;Parent=Msa0828950-mRNA-1 |
| chr5_4 | exon | 1903638 | 1903821 | 1903638 | ID=Msa0828950-mRNA-1:exon:536;Parent=Msa0828950-mRNA-1 |
| chr5_4 | exon | 1904023 | 1904089 | 1904023 | ID=Msa0828950-mRNA-1:exon:535;Parent=Msa0828950-mRNA-1 |
| chr5_4 | five_prime_UTR | 1904023 | 1904089 | 1904023 | ID=Msa0828950-mRNA-1:five_prime_utr;Parent=Msa0828950-mRNA-1 |
| chr5_4 | five_prime_UTR | 1903638 | 1903821 | 1903638 | ID=Msa0828950-mRNA-1:five_prime_utr;Parent=Msa0828950-mRNA-1 |
| chr5_4 | five_prime_UTR | 1901080 | 1901102 | 1901080 | ID=Msa0828950-mRNA-1:five_prime_utr;Parent=Msa0828950-mRNA-1 |
| chr5_4 | CDS | 1900884 | 1901079 | 1900884 | ID=Msa0828950-mRNA-1:cds;Parent=Msa0828950-mRNA-1 |
| chr5_4 | CDS | 1899926 | 1900652 | 1899926 | ID=Msa0828950-mRNA-1:cds;Parent=Msa0828950-mRNA-1 |
| chr5_4 | CDS | 1899512 | 1899665 | 1899512 | ID=Msa0828950-mRNA-1:cds;Parent=Msa0828950-mRNA-1 |
| chr5_4 | three_prime_UTR | 1899199 | 1899511 | 1899199 | ID=Msa0828950-mRNA-1:three_prime_utr;Parent=Msa0828950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
