Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805170 | sp|O22715|AP1M2_ARATH | 84.813 | 428 | 44 | 1 | 1 | 407 | 1 | 428 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805170 | G7K043 | 95.093 | 428 | 0 | 1 | 1 | 407 | 1 | 428 | 0.0 | 830 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0762680 | Msa0805170 | 0.894287 | 2.840648e-75 | -8.615850e-47 |
| Msa0805170 | Msa1165090 | 0.830656 | 2.597349e-55 | -8.615850e-47 |
| Msa0805170 | Msa1368080 | 0.801261 | 9.785459e-49 | -8.615850e-47 |
| Msa0805170 | Msa1373170 | 0.821265 | 4.425240e-53 | -8.615850e-47 |
| Msa0805170 | Msa1403560 | 0.823932 | 1.061407e-53 | -8.615850e-47 |
| Msa0805170 | Msa1403570 | 0.815507 | 8.922549e-52 | -8.615850e-47 |
| Msa0138050 | Msa0805170 | 0.802464 | 5.540639e-49 | -8.615850e-47 |
| Msa0188700 | Msa0805170 | 0.803926 | 2.760255e-49 | -8.615850e-47 |
| Msa0209140 | Msa0805170 | 0.812593 | 3.921557e-51 | -8.615850e-47 |
| Msa0225480 | Msa0805170 | 0.812151 | 4.898087e-51 | -8.615850e-47 |
| Msa0428210 | Msa0805170 | 0.806156 | 9.433141e-50 | -8.615850e-47 |
| Msa0430230 | Msa0805170 | 0.815996 | 6.943216e-52 | -8.615850e-47 |
| Msa0270200 | Msa0805170 | 0.811370 | 7.243496e-51 | -8.615850e-47 |
| Msa0270210 | Msa0805170 | 0.815172 | 1.059204e-51 | -8.615850e-47 |
| Msa0519150 | Msa0805170 | 0.836009 | 1.203024e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805170 | MtrunA17_Chr5g0413081 | 95.093 | 428 | 0 | 1 | 1 | 407 | 1 | 428 | 0.0 | 830 |
| Msa0805170 | MtrunA17_Chr8g0368141 | 89.019 | 428 | 26 | 1 | 1 | 407 | 1 | 428 | 0.0 | 794 |
| Msa0805170 | MtrunA17_Chr5g0400501 | 41.364 | 440 | 220 | 6 | 1 | 405 | 1 | 437 | 2.84e-113 | 338 |
| Msa0805170 | MtrunA17_Chr3g0141861 | 30.474 | 443 | 263 | 9 | 6 | 406 | 3 | 442 | 9.09e-68 | 221 |
| Msa0805170 | MtrunA17_Chr5g0427331 | 30.396 | 454 | 258 | 11 | 6 | 406 | 3 | 451 | 2.16e-65 | 215 |
| Msa0805170 | MtrunA17_Chr7g0271601 | 24.138 | 435 | 266 | 12 | 7 | 405 | 4 | 410 | 8.82e-35 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805170 | AT1G60780.1 | 84.813 | 428 | 44 | 1 | 1 | 407 | 1 | 428 | 0.0 | 770 |
| Msa0805170 | AT1G10730.1 | 80.374 | 428 | 63 | 1 | 1 | 407 | 1 | 428 | 0.0 | 731 |
| Msa0805170 | AT5G46630.1 | 41.364 | 440 | 220 | 5 | 1 | 405 | 1 | 437 | 1.98e-116 | 347 |
| Msa0805170 | AT5G46630.2 | 39.904 | 416 | 212 | 5 | 1 | 381 | 1 | 413 | 3.43e-103 | 313 |
| Msa0805170 | AT4G24550.2 | 28.889 | 450 | 269 | 8 | 6 | 406 | 4 | 451 | 1.41e-68 | 224 |
| Msa0805170 | AT4G24550.3 | 28.698 | 338 | 196 | 5 | 6 | 299 | 4 | 340 | 1.31e-51 | 177 |
| Msa0805170 | AT4G24550.1 | 28.698 | 338 | 196 | 5 | 6 | 299 | 4 | 340 | 1.52e-51 | 177 |
| Msa0805170 | AT1G56590.1 | 25.285 | 439 | 262 | 12 | 7 | 406 | 4 | 415 | 2.20e-34 | 132 |
Find 120 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCTTCCACCCAAATTAA+AGG | 0.175025 | 5_3:-21646461 | None:intergenic |
| TAGAGAAGTTGGAATTTATT+TGG | 0.187428 | 5_3:+21648552 | Msa0805170:three_prime_UTR |
| TTCAGGTTAAGCCTTTAATT+TGG | 0.191238 | 5_3:+21646450 | Msa0805170:intron |
| TATGAGCTAAGGCTTATTTA+AGG | 0.229610 | 5_3:+21648451 | Msa0805170:CDS |
| AAAGAGTCGGATTGAAATTA+TGG | 0.266135 | 5_3:+21646499 | Msa0805170:CDS |
| TGCTTCCTCATCTGTTATAC+TGG | 0.267401 | 5_3:-21646991 | None:intergenic |
| AAAAGCTAGGAGTCAGTTTA+AGG | 0.275911 | 5_3:+21646523 | Msa0805170:CDS |
| TCAAACAGGTGGATGGGGTT+TGG | 0.276922 | 5_3:+21648522 | Msa0805170:three_prime_UTR |
| ATCATGAAGAGAAAGATATT+TGG | 0.291945 | 5_3:-21648575 | None:intergenic |
| CAAACAGGTGGATGGGGTTT+GGG | 0.292884 | 5_3:+21648523 | Msa0805170:three_prime_UTR |
| GAATGTCTAGATATATTAAA+TGG | 0.293243 | 5_3:-21648940 | None:intergenic |
| TGAGCTACTTGATGAAATTA+TGG | 0.307055 | 5_3:+21644406 | Msa0805170:CDS |
| TCAGGTTAAGCCTTTAATTT+GGG | 0.308649 | 5_3:+21646451 | Msa0805170:intron |
| CCCATTGACGTTCGAACATT+AGG | 0.309842 | 5_3:-21646769 | None:intergenic |
| TAATTAGATCTGACGTTGTT+GGG | 0.329471 | 5_3:+21644731 | Msa0805170:CDS |
| TCGGTGGATTGGATCGGATT+TGG | 0.331185 | 5_3:-21643572 | None:intergenic |
| CACCAAACTCATTGATAAAC+AGG | 0.331688 | 5_3:+21643720 | Msa0805170:CDS |
| TGAAGAAGACGACGGAGAAT+TGG | 0.342083 | 5_3:-21643526 | None:intergenic |
| TATTGAGAAGAGTGGGTATC+AGG | 0.353475 | 5_3:+21648390 | Msa0805170:CDS |
| GAAGAAGACGACGGAGAATT+GGG | 0.364416 | 5_3:-21643525 | None:intergenic |
| TTGGGACTCTTTAGAGAAGT+TGG | 0.384217 | 5_3:+21648541 | Msa0805170:three_prime_UTR |
| AACCTGTTTATCAATGAGTT+TGG | 0.398256 | 5_3:-21643722 | None:intergenic |
| TTGAAGATTATTGAGAAGAG+TGG | 0.401908 | 5_3:+21648382 | Msa0805170:CDS |
| TTAGGATTGGTTGCATCAAC+AGG | 0.412796 | 5_3:-21646751 | None:intergenic |
| CTTGATGAAATTATGGACTT+TGG | 0.414029 | 5_3:+21644413 | Msa0805170:CDS |
| TCAAAGGCCGCATCCTCGTC+TGG | 0.420613 | 5_3:+21643650 | Msa0805170:CDS |
| TAAGACTGATGCTTATAGAA+TGG | 0.429934 | 5_3:+21644478 | Msa0805170:CDS |
| AAATGATAGAGTGTTATTAG+AGG | 0.432015 | 5_3:+21646030 | Msa0805170:CDS |
| ATCTCAAATTTCACGCGTAT+AGG | 0.434573 | 5_3:-21647032 | None:intergenic |
| TCCTAATGTTCGAACGTCAA+TGG | 0.438449 | 5_3:+21646768 | Msa0805170:CDS |
| TGGAAAATTCGATCCTTCCC+TGG | 0.461482 | 5_3:+21646829 | Msa0805170:CDS |
| AACTATCAGCGAATTCAAAC+AGG | 0.461612 | 5_3:+21648508 | Msa0805170:three_prime_UTR |
| GATCCGGTTGTTTACGATAA+CGG | 0.462375 | 5_3:+21643859 | Msa0805170:CDS |
| TTGGTTGCATCAACAGGAAC+AGG | 0.463558 | 5_3:-21646745 | None:intergenic |
| CCTAATGTTCGAACGTCAAT+GGG | 0.466244 | 5_3:+21646769 | Msa0805170:CDS |
| CGTTCGATTTGATGACATAC+AGG | 0.467708 | 5_3:+21646301 | Msa0805170:CDS |
| TTGGAGCAGTGTTGCGGTGG+TGG | 0.471905 | 5_3:-21643553 | None:intergenic |
| ATCTTTGCCTCGGTATATTG+AGG | 0.473686 | 5_3:-21644440 | None:intergenic |
| TTCGAAGATACCTTGCCTCC+AGG | 0.475747 | 5_3:-21646847 | None:intergenic |
| ACCACCGCATCATCAATGTC+AGG | 0.484386 | 5_3:+21643598 | Msa0805170:exon |
| GAGTTTGGTGAAGAAACGTT+CGG | 0.488898 | 5_3:-21643707 | None:intergenic |
| CAACTCAATCTCGACATTTG+TGG | 0.490408 | 5_3:-21646722 | None:intergenic |
| GGTATGCCCGAGTGTAAACT+TGG | 0.500011 | 5_3:+21646004 | Msa0805170:CDS |
| CGAATTCAAACAGGTGGATG+GGG | 0.504622 | 5_3:+21648517 | Msa0805170:three_prime_UTR |
| AGTTACTCAAAGACCTCCTA+TGG | 0.508336 | 5_3:+21644502 | Msa0805170:CDS |
| ATTTCTTTCATCCCTCCTGA+TGG | 0.509512 | 5_3:+21646276 | Msa0805170:CDS |
| ATCAAATCGAACGATCCATC+AGG | 0.513755 | 5_3:-21646291 | None:intergenic |
| GAAGAAACGTTCGGCTTCGA+TGG | 0.521450 | 5_3:-21643698 | None:intergenic |
| AGCGAATTCAAACAGGTGGA+TGG | 0.522712 | 5_3:+21648515 | Msa0805170:three_prime_UTR |
| GCGAATTCAAACAGGTGGAT+GGG | 0.523106 | 5_3:+21648516 | Msa0805170:three_prime_UTR |
| ATTCCAGAAACAGTAAAATA+CGG | 0.525326 | 5_3:-21647056 | None:intergenic |
| CTCACTTAAAATCTTTGCCT+CGG | 0.525393 | 5_3:-21644450 | None:intergenic |
| GCGGTGGTTGATCGGTGGAT+TGG | 0.526014 | 5_3:-21643583 | None:intergenic |
| GTGGGTATCAGGCTCTTCCA+TGG | 0.527442 | 5_3:+21648401 | Msa0805170:CDS |
| TGACGTTCGAACATTAGGAT+TGG | 0.528631 | 5_3:-21646764 | None:intergenic |
| TTAATTAGATCTGACGTTGT+TGG | 0.530637 | 5_3:+21644730 | Msa0805170:CDS |
| AATATTCTTGTCAATAGCAA+TGG | 0.531888 | 5_3:+21644703 | Msa0805170:CDS |
| TGAAGATTATTGAGAAGAGT+GGG | 0.536978 | 5_3:+21648383 | Msa0805170:CDS |
| TGTATAATGAAGATGACTAA+AGG | 0.537800 | 5_3:-21648890 | None:intergenic |
| CAAGGGAAAAGCGATAGACT+TGG | 0.539799 | 5_3:+21646069 | Msa0805170:CDS |
| TTGAAATTATGGTAAAAGCT+AGG | 0.542366 | 5_3:+21646510 | Msa0805170:CDS |
| TTTATGAAGGTGTGTCCGGT+TGG | 0.542485 | 5_3:+21646230 | Msa0805170:intron |
| TGATGAACAATCTCAAGATC+CGG | 0.542836 | 5_3:+21643843 | Msa0805170:CDS |
| GGTTAAGCCTTTAATTTGGG+TGG | 0.544300 | 5_3:+21646454 | Msa0805170:intron |
| ACACCGTTATCGTAAACAAC+CGG | 0.544469 | 5_3:-21643862 | None:intergenic |
| CTGTTCCTCCTCGACATCAA+AGG | 0.548111 | 5_3:+21643634 | Msa0805170:CDS |
| CGCGGTAGTCACGCCAGACG+AGG | 0.552252 | 5_3:-21643663 | None:intergenic |
| AATTAGATCTGACGTTGTTG+GGG | 0.553267 | 5_3:+21644732 | Msa0805170:CDS |
| ATTTAAACCAAGTTTACACT+CGG | 0.555581 | 5_3:-21646011 | None:intergenic |
| TCGAAGATACCTTGCCTCCA+GGG | 0.564558 | 5_3:-21646846 | None:intergenic |
| TTGATGATGCGGTGGTTGAT+CGG | 0.567883 | 5_3:-21643591 | None:intergenic |
| TCGATCCTTCCCTGGAGGCA+AGG | 0.573782 | 5_3:+21646837 | Msa0805170:CDS |
| GGTTGATCGGTGGATTGGAT+CGG | 0.575156 | 5_3:-21643578 | None:intergenic |
| TTGAAAAGCACTCAAAGAGT+CGG | 0.576501 | 5_3:+21646486 | Msa0805170:CDS |
| GACATACAGGCTCAGTACAC+AGG | 0.577294 | 5_3:+21646314 | Msa0805170:CDS |
| CCTCATCTGTTATACTGGGA+AGG | 0.577347 | 5_3:-21646986 | None:intergenic |
| AGATACCTTGCCTCCAGGGA+AGG | 0.578555 | 5_3:-21646842 | None:intergenic |
| TGGGTATCAGGCTCTTCCAT+GGG | 0.580053 | 5_3:+21648402 | Msa0805170:CDS |
| GGCACAAGGCAGAACAACCA+AGG | 0.585733 | 5_3:+21646051 | Msa0805170:CDS |
| AGTCACGCCAGACGAGGATG+CGG | 0.585775 | 5_3:-21643657 | None:intergenic |
| GTGAGATACATAACAATGGC+GGG | 0.586630 | 5_3:+21648424 | Msa0805170:CDS |
| ATTGTTATGTATCTCACCCA+TGG | 0.588077 | 5_3:-21648418 | None:intergenic |
| GCACAAGGCAGAACAACCAA+GGG | 0.590241 | 5_3:+21646052 | Msa0805170:CDS |
| CCACCGCATCATCAATGTCA+GGG | 0.593019 | 5_3:+21643599 | Msa0805170:exon |
| ACAGCATTAGTCACTGCCAT+AGG | 0.595173 | 5_3:-21644518 | None:intergenic |
| GCTTCCTCATCTGTTATACT+GGG | 0.596982 | 5_3:-21646990 | None:intergenic |
| GCATTAGTCACTGCCATAGG+AGG | 0.598918 | 5_3:-21644515 | None:intergenic |
| ATGATGCGGTGGTTGATCGG+TGG | 0.601666 | 5_3:-21643588 | None:intergenic |
| CAGTGACTAATGCTGTGTCT+TGG | 0.615245 | 5_3:+21644525 | Msa0805170:CDS |
| AAATCGAACGATCCATCAGG+AGG | 0.615509 | 5_3:-21646288 | None:intergenic |
| GCTGTGTCTTGGCGAAGTGA+AGG | 0.616774 | 5_3:+21644536 | Msa0805170:CDS |
| CCCTGACATTGATGATGCGG+TGG | 0.617425 | 5_3:-21643599 | None:intergenic |
| CTGTGTCTTGGCGAAGTGAA+GGG | 0.618939 | 5_3:+21644537 | Msa0805170:CDS |
| AAATTACTATATAAAGACAA+TGG | 0.621155 | 5_3:-21648812 | None:intergenic |
| GAAACGTTCGGCTTCGATGG+CGG | 0.623972 | 5_3:-21643695 | None:intergenic |
| TTCAATAACTTGTTTCCTCG+CGG | 0.627732 | 5_3:+21643481 | Msa0805170:five_prime_UTR |
| AAGAAGACGACGGAGAATTG+GGG | 0.629055 | 5_3:-21643524 | None:intergenic |
| CCTTCCCAGTATAACAGATG+AGG | 0.630177 | 5_3:+21646986 | Msa0805170:CDS |
| GGATGCGGCCTTTGATGTCG+AGG | 0.631816 | 5_3:-21643642 | None:intergenic |
| TCGGATTTGGAGCAGTGTTG+CGG | 0.632108 | 5_3:-21643559 | None:intergenic |
| AATAACTTGTTTCCTCGCGG+TGG | 0.632879 | 5_3:+21643484 | Msa0805170:five_prime_UTR |
| TGCCCCTGACATTGATGATG+CGG | 0.635315 | 5_3:-21643602 | None:intergenic |
| TTTAAACCAAGTTTACACTC+GGG | 0.636655 | 5_3:-21646010 | None:intergenic |
| TATCAGCGAATTCAAACAGG+TGG | 0.641812 | 5_3:+21648511 | Msa0805170:three_prime_UTR |
| TGGCGGGAGAGTATGAGCTA+AGG | 0.642064 | 5_3:+21648440 | Msa0805170:CDS |
| CACCGCATCATCAATGTCAG+GGG | 0.662861 | 5_3:+21643600 | Msa0805170:exon |
| GATTTGGAGCAGTGTTGCGG+TGG | 0.671129 | 5_3:-21643556 | None:intergenic |
| CTCGTCTGGCGTGACTACCG+CGG | 0.677454 | 5_3:+21643664 | Msa0805170:CDS |
| GGAGTCAGTTTAAGGAACGT+AGG | 0.677567 | 5_3:+21646531 | Msa0805170:CDS |
| TGCGGCCTTTGATGTCGAGG+AGG | 0.677780 | 5_3:-21643639 | None:intergenic |
| TGGTTATCCTCAATATACCG+AGG | 0.679386 | 5_3:+21644433 | Msa0805170:CDS |
| AATCGAACGATCCATCAGGA+GGG | 0.687261 | 5_3:-21646287 | None:intergenic |
| TTGGAGAAAAGGACTACACA+AGG | 0.693619 | 5_3:-21648713 | None:intergenic |
| GGTGAGATACATAACAATGG+CGG | 0.696604 | 5_3:+21648423 | Msa0805170:CDS |
| ATGGGTGAGATACATAACAA+TGG | 0.702359 | 5_3:+21648420 | Msa0805170:CDS |
| AAAATTCGATCCTTCCCTGG+AGG | 0.705831 | 5_3:+21646832 | Msa0805170:CDS |
| AGAGTGTTATTAGAGGCACA+AGG | 0.715426 | 5_3:+21646037 | Msa0805170:CDS |
| ACGACGTCGTTGCCACCGCG+AGG | 0.718150 | 5_3:-21643496 | None:intergenic |
| CGATGGCGGAGACGTCGCCG+CGG | 0.726811 | 5_3:-21643681 | None:intergenic |
| GTGGTGAATGAAGAAGACGA+CGG | 0.782226 | 5_3:-21643534 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGTATATAAAATTTCAT+GGG | - | chr5_3:21645617-21645636 | None:intergenic | 10.0% |
| !! | TTAAAGTATATAAAATTTCA+TGG | - | chr5_3:21645618-21645637 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTAAAAAACTGTT+TGG | - | chr5_3:21645694-21645713 | None:intergenic | 10.0% |
| !!! | TTTTTCTTTATTTTTTTTCT+TGG | + | chr5_3:21646583-21646602 | Msa0805170:intron | 10.0% |
| !!! | TTAAAAATTATGCATAATTT+TGG | + | chr5_3:21648228-21648247 | Msa0805170:intron | 10.0% |
| !! | TCAAATTATACATAAAATCA+CGG | - | chr5_3:21643795-21643814 | None:intergenic | 15.0% |
| !!! | TATTGTGTTGTTTTAATTTT+TGG | + | chr5_3:21644356-21644375 | Msa0805170:intron | 15.0% |
| !! | TGTATAAATAGAAGAATATA+TGG | + | chr5_3:21644960-21644979 | Msa0805170:intron | 15.0% |
| !! | TTTCTATTAAATCTAATTTC+TGG | + | chr5_3:21645088-21645107 | Msa0805170:intron | 15.0% |
| !! | TTCTATTAAATCTAATTTCT+GGG | + | chr5_3:21645089-21645108 | Msa0805170:intron | 15.0% |
| !!! | AAGTTTAAAATTTACATTTC+TGG | + | chr5_3:21645433-21645452 | Msa0805170:intron | 15.0% |
| !!! | AGTTTAAAATTTACATTTCT+GGG | + | chr5_3:21645434-21645453 | Msa0805170:intron | 15.0% |
| !! | ATAAAATAAATCCTATTAGT+TGG | - | chr5_3:21646695-21646714 | None:intergenic | 15.0% |
| !!! | AATATAAGAAAATCATGTTT+TGG | - | chr5_3:21647094-21647113 | None:intergenic | 15.0% |
| !!! | TTTTCTTATATTCTAAATGT+TGG | + | chr5_3:21647102-21647121 | Msa0805170:intron | 15.0% |
| !!! | TAACATTTTGATTATTTCAA+TGG | + | chr5_3:21647284-21647303 | Msa0805170:intron | 15.0% |
| !! | TGAAAATTTATGAATATCAA+TGG | - | chr5_3:21647366-21647385 | None:intergenic | 15.0% |
| !! | TTTCATAAAAAACAAAAACT+TGG | - | chr5_3:21647958-21647977 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTATGAAACATT+AGG | + | chr5_3:21647962-21647981 | Msa0805170:intron | 15.0% |
| !!! | TTGTTTTTTATGAAACATTA+GGG | + | chr5_3:21647963-21647982 | Msa0805170:intron | 15.0% |
| !!! | TTAGTATGTTTTAATAGTTT+AGG | + | chr5_3:21648153-21648172 | Msa0805170:intron | 15.0% |
| !! | AAATTACTATATAAAGACAA+TGG | - | chr5_3:21648815-21648834 | None:intergenic | 15.0% |
| !!! | TAAGCATTATTTTGAAGAAT+TGG | + | chr5_3:21644096-21644115 | Msa0805170:intron | 20.0% |
| !!! | GTTGTTTTAATTTTTGGATT+TGG | + | chr5_3:21644362-21644381 | Msa0805170:intron | 20.0% |
| !! | TATGTTTATGAGTTGTAATT+TGG | + | chr5_3:21644610-21644629 | Msa0805170:intron | 20.0% |
| !!! | ACTTTTCTATTTTTGTATTC+AGG | + | chr5_3:21644654-21644673 | Msa0805170:intron | 20.0% |
| !! | AAATATATAAGAATCAGCTT+AGG | - | chr5_3:21645241-21645260 | None:intergenic | 20.0% |
| !! | TAACTTGGGAATAATTTAAT+GGG | - | chr5_3:21645575-21645594 | None:intergenic | 20.0% |
| !!! | TTAACTTGGGAATAATTTAA+TGG | - | chr5_3:21645576-21645595 | None:intergenic | 20.0% |
| !! | TTAAATTATTCCCAAGTTAA+AGG | + | chr5_3:21645576-21645595 | Msa0805170:intron | 20.0% |
| !!! | GTTTTTTAAAAAAAATACGC+AGG | + | chr5_3:21645698-21645717 | Msa0805170:intron | 20.0% |
| !! | ATCAAATTTAGGTATCAAAA+TGG | - | chr5_3:21646897-21646916 | None:intergenic | 20.0% |
| !! | GATTAATCACAATCAAATTT+AGG | - | chr5_3:21646908-21646927 | None:intergenic | 20.0% |
| !! | AGAGTAATAAACCATTAATT+TGG | + | chr5_3:21647486-21647505 | Msa0805170:intron | 20.0% |
| !! | TGCAATAAAACATACTAAAA+AGG | + | chr5_3:21647571-21647590 | Msa0805170:intron | 20.0% |
| !! | TCAATTTCAAATTGCAAAAT+AGG | - | chr5_3:21647873-21647892 | None:intergenic | 20.0% |
| !!! | AACTTATAATTCACACATTT+TGG | - | chr5_3:21648027-21648046 | None:intergenic | 20.0% |
| !! | AATAGTTTAGGTACTAAATT+AGG | + | chr5_3:21648165-21648184 | Msa0805170:intron | 20.0% |
| !! | ATAGTTTAGGTACTAAATTA+GGG | + | chr5_3:21648166-21648185 | Msa0805170:intron | 20.0% |
| !! | AATTTCACAGATATATCATA+CGG | - | chr5_3:21648273-21648292 | None:intergenic | 20.0% |
| !! | CTTCTCTCAAAAAAAAAAAA+AGG | - | chr5_3:21648683-21648702 | None:intergenic | 20.0% |
| !!! | TTTTCTCAACAAAAACATAT+TGG | - | chr5_3:21648735-21648754 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTAATCCTCTTTT+TGG | + | chr5_3:21648757-21648776 | Msa0805170:three_prime_UTR | 20.0% |
| !! | GAATGTCTAGATATATTAAA+TGG | - | chr5_3:21648943-21648962 | None:intergenic | 20.0% |
| !!! | CAATTTTCGCATTTTTTGTT+AGG | + | chr5_3:21643819-21643838 | Msa0805170:intron | 25.0% |
| ! | TCAATTCTCAATTCAAACAA+AGG | - | chr5_3:21644017-21644036 | None:intergenic | 25.0% |
| !!! | TTATTTTGAAGAATTGGAAG+AGG | + | chr5_3:21644102-21644121 | Msa0805170:intron | 25.0% |
| ! | TTCATAGTACAAAATACTTC+GGG | - | chr5_3:21644182-21644201 | None:intergenic | 25.0% |
| ! | CTTCATAGTACAAAATACTT+CGG | - | chr5_3:21644183-21644202 | None:intergenic | 25.0% |
| ! | GATAAGTTACAAGAAAAATG+AGG | + | chr5_3:21644559-21644578 | Msa0805170:CDS | 25.0% |
| ! | AATGAGGTAGTTATTATTAG+AGG | + | chr5_3:21644575-21644594 | Msa0805170:intron | 25.0% |
| !!! | TTTTTGTATTCAGGTTTTCT+TGG | + | chr5_3:21644663-21644682 | Msa0805170:intron | 25.0% |
| ! | AATATTCTTGTCAATAGCAA+TGG | + | chr5_3:21644703-21644722 | Msa0805170:CDS | 25.0% |
| ! | CCTTATTCTATAACATATCA+CGG | - | chr5_3:21644882-21644901 | None:intergenic | 25.0% |
| ! | CGTGATATGTTATAGAATAA+GGG | + | chr5_3:21644880-21644899 | Msa0805170:intron | 25.0% |
| ! | ATAGAAGAATATATGGATAG+AGG | + | chr5_3:21644967-21644986 | Msa0805170:intron | 25.0% |
| !!! | ACAATCTGTTTTTGACTTTT+TGG | + | chr5_3:21645118-21645137 | Msa0805170:intron | 25.0% |
| ! | ATATTGATATGTGTGGTTAT+TGG | + | chr5_3:21645174-21645193 | Msa0805170:intron | 25.0% |
| ! | AACGATATACATTAGAGATT+AGG | + | chr5_3:21645207-21645226 | Msa0805170:intron | 25.0% |
| ! | ACGATATACATTAGAGATTA+GGG | + | chr5_3:21645208-21645227 | Msa0805170:intron | 25.0% |
| ! | TGCAAATGAAATTAGCAATT+TGG | + | chr5_3:21645320-21645339 | Msa0805170:intron | 25.0% |
| ! | ATTGAGAAATCATTATTCCT+GGG | + | chr5_3:21645502-21645521 | Msa0805170:intron | 25.0% |
| ! | GAATAATTTAATGGGAATGA+TGG | - | chr5_3:21645567-21645586 | None:intergenic | 25.0% |
| !! | AAATAACTTCCAATTTTCCT+AGG | + | chr5_3:21645652-21645671 | Msa0805170:intron | 25.0% |
| ! | TTGAATATTCCTAGGAAAAT+TGG | - | chr5_3:21645664-21645683 | None:intergenic | 25.0% |
| ! | GCTCAAAAATTATTATTCCT+AGG | - | chr5_3:21645762-21645781 | None:intergenic | 25.0% |
| ! | ATTTAAACCAAGTTTACACT+CGG | - | chr5_3:21646014-21646033 | None:intergenic | 25.0% |
| !! | AAATGATAGAGTGTTATTAG+AGG | + | chr5_3:21646030-21646049 | Msa0805170:CDS | 25.0% |
| !!! | TAATAAGTTTCTGTTTTGAG+AGG | + | chr5_3:21646356-21646375 | Msa0805170:intron | 25.0% |
| ! | TTGAAATTATGGTAAAAGCT+AGG | + | chr5_3:21646510-21646529 | Msa0805170:CDS | 25.0% |
| ! | TATCAAAATGGATGTTATTG+AGG | - | chr5_3:21646885-21646904 | None:intergenic | 25.0% |
| ! | TTGATTGTGATTAATCAGAT+TGG | + | chr5_3:21646912-21646931 | Msa0805170:intron | 25.0% |
| ! | TGATTGTGATTAATCAGATT+GGG | + | chr5_3:21646913-21646932 | Msa0805170:intron | 25.0% |
| ! | ATTCCAGAAACAGTAAAATA+CGG | - | chr5_3:21647059-21647078 | None:intergenic | 25.0% |
| ! | TCTTATATTCTAAATGTTGG+AGG | + | chr5_3:21647105-21647124 | Msa0805170:intron | 25.0% |
| ! | AATCAAAATGTTAACAGAGA+CGG | - | chr5_3:21647277-21647296 | None:intergenic | 25.0% |
| !!! | TGATTATTTCAATGGATTGA+TGG | + | chr5_3:21647292-21647311 | Msa0805170:intron | 25.0% |
| ! | TAATAGTTTAGGGACTAATT+TGG | - | chr5_3:21647534-21647553 | None:intergenic | 25.0% |
| ! | AATTAGTCCCTAAACTATTA+AGG | + | chr5_3:21647534-21647553 | Msa0805170:intron | 25.0% |
| ! | ATTAGTCCCTAAACTATTAA+GGG | + | chr5_3:21647535-21647554 | Msa0805170:intron | 25.0% |
| ! | AAACTTCATTACAAAAAACC+AGG | - | chr5_3:21647699-21647718 | None:intergenic | 25.0% |
| ! | TTTCGGTTTCTTATGATATT+TGG | + | chr5_3:21647741-21647760 | Msa0805170:intron | 25.0% |
| ! | TTACATATGAGATTATCGAT+TGG | + | chr5_3:21647898-21647917 | Msa0805170:intron | 25.0% |
| !! | TTGATGTATTTTCATGCTTT+AGG | + | chr5_3:21647991-21648010 | Msa0805170:intron | 25.0% |
| !! | TGATGTATTTTCATGCTTTA+GGG | + | chr5_3:21647992-21648011 | Msa0805170:intron | 25.0% |
| ! | GTGAATTATAAGTTTGACAT+AGG | + | chr5_3:21648033-21648052 | Msa0805170:intron | 25.0% |
| !!! | TTTTTCAAGGACAAAATTGA+CGG | + | chr5_3:21648200-21648219 | Msa0805170:intron | 25.0% |
| ! | TAGAGAAGTTGGAATTTATT+TGG | + | chr5_3:21648552-21648571 | Msa0805170:three_prime_UTR | 25.0% |
| ! | ATCATGAAGAGAAAGATATT+TGG | - | chr5_3:21648578-21648597 | None:intergenic | 25.0% |
| ! | ACAAAAACATATTGGAGAAA+AGG | - | chr5_3:21648727-21648746 | None:intergenic | 25.0% |
| ! | TGTATAATGAAGATGACTAA+AGG | - | chr5_3:21648893-21648912 | None:intergenic | 25.0% |
| AACCTGTTTATCAATGAGTT+TGG | - | chr5_3:21643725-21643744 | None:intergenic | 30.0% | |
| TTGAAATTGGATCTGAGAAA+TGG | - | chr5_3:21643758-21643777 | None:intergenic | 30.0% | |
| ! | GTTGAGTGTGAATTTGAAAT+TGG | - | chr5_3:21643771-21643790 | None:intergenic | 30.0% |
| TGAGCTACTTGATGAAATTA+TGG | + | chr5_3:21644406-21644425 | Msa0805170:CDS | 30.0% | |
| CTTGATGAAATTATGGACTT+TGG | + | chr5_3:21644413-21644432 | Msa0805170:CDS | 30.0% | |
| TAAGACTGATGCTTATAGAA+TGG | + | chr5_3:21644478-21644497 | Msa0805170:CDS | 30.0% | |
| GTTTATGAGTTGTAATTTGG+TGG | + | chr5_3:21644613-21644632 | Msa0805170:intron | 30.0% | |
| TTAATTAGATCTGACGTTGT+TGG | + | chr5_3:21644730-21644749 | Msa0805170:CDS | 30.0% | |
| TAATTAGATCTGACGTTGTT+GGG | + | chr5_3:21644731-21644750 | Msa0805170:CDS | 30.0% | |
| ! | TGAAGATGAGAACATTTTTG+AGG | + | chr5_3:21644758-21644777 | Msa0805170:CDS | 30.0% |
| !!! | TTTTGAGATCATCTAGCTTT+TGG | + | chr5_3:21644826-21644845 | Msa0805170:intron | 30.0% |
| ! | GATTGCAACATACAGTTTTA+TGG | + | chr5_3:21644853-21644872 | Msa0805170:intron | 30.0% |
| CCGTGATATGTTATAGAATA+AGG | + | chr5_3:21644879-21644898 | Msa0805170:intron | 30.0% | |
| !! | TGTTAGAGAAGTTTGTTAGT+TGG | + | chr5_3:21644923-21644942 | Msa0805170:intron | 30.0% |
| TCTATTGAAGGGAAAACTAT+TGG | + | chr5_3:21645026-21645045 | Msa0805170:intron | 30.0% | |
| TCTCCTATGTTCCTAATTAA+TGG | + | chr5_3:21645061-21645080 | Msa0805170:intron | 30.0% | |
| CTCCTATGTTCCTAATTAAT+GGG | + | chr5_3:21645062-21645081 | Msa0805170:intron | 30.0% | |
| !! | ATAGAAAGCACCCATTAATT+AGG | - | chr5_3:21645075-21645094 | None:intergenic | 30.0% |
| AAAGTCAAAAACAGATTGTG+AGG | - | chr5_3:21645117-21645136 | None:intergenic | 30.0% | |
| TTGTATCTAGCTGAAATTTG+AGG | + | chr5_3:21645295-21645314 | Msa0805170:intron | 30.0% | |
| TGAAATTAGCAATTTGGACT+TGG | + | chr5_3:21645326-21645345 | Msa0805170:intron | 30.0% | |
| ATTAAACCAATCCATAAGCA+TGG | - | chr5_3:21645382-21645401 | None:intergenic | 30.0% | |
| TTTAATCAGCTAGTACACTT+GGG | + | chr5_3:21645396-21645415 | Msa0805170:intron | 30.0% | |
| ! | TTTACATTTCTGGGAATACA+TGG | + | chr5_3:21645443-21645462 | Msa0805170:intron | 30.0% |
| ! | TTACATTTCTGGGAATACAT+GGG | + | chr5_3:21645444-21645463 | Msa0805170:intron | 30.0% |
| CTCAATCTTGTAACAAACAT+GGG | - | chr5_3:21645488-21645507 | None:intergenic | 30.0% | |
| TCTCAATCTTGTAACAAACA+TGG | - | chr5_3:21645489-21645508 | None:intergenic | 30.0% | |
| GATTGAGAAATCATTATTCC+TGG | + | chr5_3:21645501-21645520 | Msa0805170:intron | 30.0% | |
| ATTATTCCCAAGTTAAAGGA+TGG | + | chr5_3:21645580-21645599 | Msa0805170:intron | 30.0% | |
| TTATTCCCAAGTTAAAGGAT+GGG | + | chr5_3:21645581-21645600 | Msa0805170:intron | 30.0% | |
| ATACCCAGGAATATAAAGAA+GGG | - | chr5_3:21645733-21645752 | None:intergenic | 30.0% | |
| CTATTAACCAACATTCATGA+TGG | + | chr5_3:21645932-21645951 | Msa0805170:intron | 30.0% | |
| AAATACTCCATCATGAATGT+TGG | - | chr5_3:21645942-21645961 | None:intergenic | 30.0% | |
| ! | TGAAAACTGACATGTGTTTT+TGG | + | chr5_3:21645965-21645984 | Msa0805170:intron | 30.0% |
| TTTAAACCAAGTTTACACTC+GGG | - | chr5_3:21646013-21646032 | None:intergenic | 30.0% | |
| TCTAATGTTGAACTCTAAGT+GGG | - | chr5_3:21646150-21646169 | None:intergenic | 30.0% | |
| ATCTAATGTTGAACTCTAAG+TGG | - | chr5_3:21646151-21646170 | None:intergenic | 30.0% | |
| !! | GCTAGTTCTAAAATTATGTC+TGG | + | chr5_3:21646204-21646223 | Msa0805170:intron | 30.0% |
| ! | TTATGTCTGGCATTTTATGA+AGG | + | chr5_3:21646217-21646236 | Msa0805170:intron | 30.0% |
| AAAATGCTTTCTCTTTCTGT+GGG | - | chr5_3:21646402-21646421 | None:intergenic | 30.0% | |
| ! | TTCAGGTTAAGCCTTTAATT+TGG | + | chr5_3:21646450-21646469 | Msa0805170:intron | 30.0% |
| ! | TCAGGTTAAGCCTTTAATTT+GGG | + | chr5_3:21646451-21646470 | Msa0805170:intron | 30.0% |
| AAAGAGTCGGATTGAAATTA+TGG | + | chr5_3:21646499-21646518 | Msa0805170:CDS | 30.0% | |
| !!! | TTTTTTTCTTGGCAGAAGAT+TGG | + | chr5_3:21646594-21646613 | Msa0805170:intron | 30.0% |
| !!! | TTTTTTCTTGGCAGAAGATT+GGG | + | chr5_3:21646595-21646614 | Msa0805170:intron | 30.0% |
| TGGTGAAACAAGGATATTTA+GGG | - | chr5_3:21646675-21646694 | None:intergenic | 30.0% | |
| TTGGTGAAACAAGGATATTT+AGG | - | chr5_3:21646676-21646695 | None:intergenic | 30.0% | |
| ! | ATACCGTATTTTACTGTTTC+TGG | + | chr5_3:21647053-21647072 | Msa0805170:CDS | 30.0% |
| !!! | TTTTACTGTTTCTGGAATAC+AGG | + | chr5_3:21647061-21647080 | Msa0805170:CDS | 30.0% |
| !!! | AGGCTATTTTTTTCTGCATT+GGG | + | chr5_3:21647125-21647144 | Msa0805170:intron | 30.0% |
| CCTCTGTCTGATAAAAAATT+GGG | + | chr5_3:21647171-21647190 | Msa0805170:intron | 30.0% | |
| ACACTATACACAATATGCAA+TGG | - | chr5_3:21647246-21647265 | None:intergenic | 30.0% | |
| TAGAATCGAATCGAATCAAT+TGG | + | chr5_3:21647417-21647436 | Msa0805170:intron | 30.0% | |
| GACAAACCCTTAATAGTTTA+GGG | - | chr5_3:21647544-21647563 | None:intergenic | 30.0% | |
| AGACAAACCCTTAATAGTTT+AGG | - | chr5_3:21647545-21647564 | None:intergenic | 30.0% | |
| AAACTAACCAAAGGACTAAA+GGG | - | chr5_3:21647619-21647638 | None:intergenic | 30.0% | |
| TAAACTAACCAAAGGACTAA+AGG | - | chr5_3:21647620-21647639 | None:intergenic | 30.0% | |
| !! | TGAAGGTTTTATAGAGTACA+AGG | - | chr5_3:21647645-21647664 | None:intergenic | 30.0% |
| AGGGAAGAAACAAAAATTGA+AGG | - | chr5_3:21647662-21647681 | None:intergenic | 30.0% | |
| AACCGAAATCATCACATAAT+CGG | - | chr5_3:21647729-21647748 | None:intergenic | 30.0% | |
| ATTTGGTCTGTAATGAATTC+TGG | + | chr5_3:21647758-21647777 | Msa0805170:intron | 30.0% | |
| ! | AGAGACTAAATAGATGGATT+GGG | + | chr5_3:21648112-21648131 | Msa0805170:intron | 30.0% |
| ! | GGAGAGAATGATATTTTTCA+AGG | + | chr5_3:21648187-21648206 | Msa0805170:intron | 30.0% |
| AGTAGATGCTTTGATTGATT+TGG | + | chr5_3:21648312-21648331 | Msa0805170:intron | 30.0% | |
| !! | TTTGATTGATTTGGTTGAGA+TGG | + | chr5_3:21648321-21648340 | Msa0805170:intron | 30.0% |
| TTGAAGATTATTGAGAAGAG+TGG | + | chr5_3:21648382-21648401 | Msa0805170:CDS | 30.0% | |
| TGAAGATTATTGAGAAGAGT+GGG | + | chr5_3:21648383-21648402 | Msa0805170:CDS | 30.0% | |
| TAAAGTTCACACCAAAAATC+AGG | + | chr5_3:21648637-21648656 | Msa0805170:three_prime_UTR | 30.0% | |
| GTGAATAAAAAGCCAAAAAG+AGG | - | chr5_3:21648772-21648791 | None:intergenic | 30.0% | |
| !! | TTCAATAACTTGTTTCCTCG+CGG | + | chr5_3:21643481-21643500 | Msa0805170:five_prime_UTR | 35.0% |
| CACCAAACTCATTGATAAAC+AGG | + | chr5_3:21643720-21643739 | Msa0805170:CDS | 35.0% | |
| TGATGAACAATCTCAAGATC+CGG | + | chr5_3:21643843-21643862 | Msa0805170:CDS | 35.0% | |
| ! | GATGTAAGCGTTTTTCTGAT+TGG | + | chr5_3:21643985-21644004 | Msa0805170:intron | 35.0% |
| !!! | ATTCGTGTGTTTTTTCTTGC+AGG | + | chr5_3:21644069-21644088 | Msa0805170:intron | 35.0% |
| AATTGGAAGAGGAATCACTT+AGG | + | chr5_3:21644113-21644132 | Msa0805170:intron | 35.0% | |
| ATTGGAAGAGGAATCACTTA+GGG | + | chr5_3:21644114-21644133 | Msa0805170:intron | 35.0% | |
| !! | TAGGGATAACTTTGTTGTTG+TGG | + | chr5_3:21644132-21644151 | Msa0805170:intron | 35.0% |
| ACTAACGTTAGTGTTGTGTT+TGG | - | chr5_3:21644220-21644239 | None:intergenic | 35.0% | |
| CTCACTTAAAATCTTTGCCT+CGG | - | chr5_3:21644453-21644472 | None:intergenic | 35.0% | |
| ! | AGTTGTAATTTGGTGGTTTG+AGG | + | chr5_3:21644620-21644639 | Msa0805170:intron | 35.0% |
| !! | TATTCAGGTTTTCTTGGATG+TGG | + | chr5_3:21644669-21644688 | Msa0805170:intron | 35.0% |
| AATTAGATCTGACGTTGTTG+GGG | + | chr5_3:21644732-21644751 | Msa0805170:CDS | 35.0% | |
| TTGAGATCTACTGCATTTGT+AGG | + | chr5_3:21644798-21644817 | Msa0805170:intron | 35.0% | |
| AAGGGTAATTAGAGTAGTTC+AGG | + | chr5_3:21644898-21644917 | Msa0805170:intron | 35.0% | |
| AGGGTAATTAGAGTAGTTCA+GGG | + | chr5_3:21644899-21644918 | Msa0805170:intron | 35.0% | |
| TAGAGTAGTGACTCTATTGA+AGG | + | chr5_3:21645014-21645033 | Msa0805170:intron | 35.0% | |
| AGAGTAGTGACTCTATTGAA+GGG | + | chr5_3:21645015-21645034 | Msa0805170:intron | 35.0% | |
| CACCCATTAATTAGGAACAT+AGG | - | chr5_3:21645067-21645086 | None:intergenic | 35.0% | |
| TATAAGAATCAGCTTAGGCT+TGG | - | chr5_3:21645236-21645255 | None:intergenic | 35.0% | |
| AATCCATAAGCATGGAGAAT+CGG | - | chr5_3:21645374-21645393 | None:intergenic | 35.0% | |
| GTTTAATCAGCTAGTACACT+TGG | + | chr5_3:21645395-21645414 | Msa0805170:intron | 35.0% | |
| TTAATCAGCTAGTACACTTG+GGG | + | chr5_3:21645397-21645416 | Msa0805170:intron | 35.0% | |
| ATCATTATTCCTGGGTATCA+AGG | + | chr5_3:21645510-21645529 | Msa0805170:intron | 35.0% | |
| ! | TGGGAAGTTATTTCATTCCT+GGG | - | chr5_3:21645538-21645557 | None:intergenic | 35.0% |
| ! | ATGGGAAGTTATTTCATTCC+TGG | - | chr5_3:21645539-21645558 | None:intergenic | 35.0% |
| ! | ATGGGAATGATGGAAGTTAT+GGG | - | chr5_3:21645557-21645576 | None:intergenic | 35.0% |
| ! | AATGGGAATGATGGAAGTTA+TGG | - | chr5_3:21645558-21645577 | None:intergenic | 35.0% |
| ! | ACTTTCCCATCCTTTAACTT+GGG | - | chr5_3:21645589-21645608 | None:intergenic | 35.0% |
| AAGTTAAAGGATGGGAAAGT+GGG | + | chr5_3:21645589-21645608 | Msa0805170:intron | 35.0% | |
| AACTCCCTTCTTTATATTCC+TGG | + | chr5_3:21645726-21645745 | Msa0805170:intron | 35.0% | |
| ACTCCCTTCTTTATATTCCT+GGG | + | chr5_3:21645727-21645746 | Msa0805170:intron | 35.0% | |
| CATACCCAGGAATATAAAGA+AGG | - | chr5_3:21645734-21645753 | None:intergenic | 35.0% | |
| ! | CATATCTGTCAATTTTCTGC+CGG | + | chr5_3:21645842-21645861 | Msa0805170:intron | 35.0% |
| GCTATCTGCAAAATATCTAC+CGG | - | chr5_3:21645864-21645883 | None:intergenic | 35.0% | |
| TTTGGCATATTCTAATGCAG+TGG | + | chr5_3:21645983-21646002 | Msa0805170:intron | 35.0% | |
| !!! | TAAGTTTCTGTTTTGAGAGG+TGG | + | chr5_3:21646359-21646378 | Msa0805170:intron | 35.0% |
| CAAAATGCTTTCTCTTTCTG+TGG | - | chr5_3:21646403-21646422 | None:intergenic | 35.0% | |
| AAGATACGGTACAATCAACA+AGG | - | chr5_3:21646430-21646449 | None:intergenic | 35.0% | |
| ! | TGATTGTACCGTATCTTTTC+AGG | + | chr5_3:21646433-21646452 | Msa0805170:intron | 35.0% |
| AGGCTTAACCTGAAAAGATA+CGG | - | chr5_3:21646444-21646463 | None:intergenic | 35.0% | |
| TTTGCTTCCACCCAAATTAA+AGG | - | chr5_3:21646464-21646483 | None:intergenic | 35.0% | |
| !! | TTGAAAAGCACTCAAAGAGT+CGG | + | chr5_3:21646486-21646505 | Msa0805170:CDS | 35.0% |
| AAAAGCTAGGAGTCAGTTTA+AGG | + | chr5_3:21646523-21646542 | Msa0805170:CDS | 35.0% | |
| ! | TTTTTCTTGGCAGAAGATTG+GGG | + | chr5_3:21646596-21646615 | Msa0805170:intron | 35.0% |
| ! | TTTAGGGCAGTCTAAATTCT+GGG | - | chr5_3:21646659-21646678 | None:intergenic | 35.0% |
| ! | ATTTAGGGCAGTCTAAATTC+TGG | - | chr5_3:21646660-21646679 | None:intergenic | 35.0% |
| ! | TCCTTGTTTCACCAACTAAT+AGG | + | chr5_3:21646681-21646700 | Msa0805170:intron | 35.0% |
| !! | TCCTATTAGTTGGTGAAACA+AGG | - | chr5_3:21646685-21646704 | None:intergenic | 35.0% |
| ! | CAGATCAATGCATCTTTTTC+AGG | - | chr5_3:21646811-21646830 | None:intergenic | 35.0% |
| ! | CTGAAAAAGATGCATTGATC+TGG | + | chr5_3:21646809-21646828 | Msa0805170:CDS | 35.0% |
| CTCCTTTCTTTGATACTTTC+AGG | + | chr5_3:21646938-21646957 | Msa0805170:intron | 35.0% | |
| !! | CTCCTGAAAGTATCAAAGAA+AGG | - | chr5_3:21646943-21646962 | None:intergenic | 35.0% |
| ATCTCAAATTTCACGCGTAT+AGG | - | chr5_3:21647035-21647054 | None:intergenic | 35.0% | |
| !!! | GAGGCTATTTTTTTCTGCAT+TGG | + | chr5_3:21647124-21647143 | Msa0805170:intron | 35.0% |
| GCCTCTGTCTGATAAAAAAT+TGG | + | chr5_3:21647170-21647189 | Msa0805170:intron | 35.0% | |
| !!! | CCCAATTTTTTATCAGACAG+AGG | - | chr5_3:21647174-21647193 | None:intergenic | 35.0% |
| CGAATCGAATCAATTGGTAA+TGG | + | chr5_3:21647423-21647442 | Msa0805170:intron | 35.0% | |
| !! | TTGGTAATGGAAAAGAGAAC+TGG | + | chr5_3:21647436-21647455 | Msa0805170:intron | 35.0% |
| TAGTTCAGGAGCCAAATTAA+TGG | - | chr5_3:21647500-21647519 | None:intergenic | 35.0% | |
| ACAAGGACTAAACTAACCAA+AGG | - | chr5_3:21647628-21647647 | None:intergenic | 35.0% | |
| CTCCGATTATGTGATGATTT+CGG | + | chr5_3:21647724-21647743 | Msa0805170:intron | 35.0% | |
| ATACCAGTGAATCTGCTAAT+CGG | - | chr5_3:21647799-21647818 | None:intergenic | 35.0% | |
| ! | CATATGAGATTATCGATTGG+AGG | + | chr5_3:21647901-21647920 | Msa0805170:intron | 35.0% |
| CATCAATTTGACCATTTGGA+TGG | - | chr5_3:21648091-21648110 | None:intergenic | 35.0% | |
| CATCCAAATGGTCAAATTGA+TGG | + | chr5_3:21648089-21648108 | Msa0805170:intron | 35.0% | |
| TCTCCATCAATTTGACCATT+TGG | - | chr5_3:21648095-21648114 | None:intergenic | 35.0% | |
| TGATGGAGAGACTAAATAGA+TGG | + | chr5_3:21648106-21648125 | Msa0805170:intron | 35.0% | |
| GAGAGACTAAATAGATGGAT+TGG | + | chr5_3:21648111-21648130 | Msa0805170:intron | 35.0% | |
| !! | GAGACTAAATAGATGGATTG+GGG | + | chr5_3:21648113-21648132 | Msa0805170:intron | 35.0% |
| !! | ATGGATTGGGGAATGATTTA+AGG | + | chr5_3:21648125-21648144 | Msa0805170:intron | 35.0% |
| CTAAAAGACCAAGACAAACA+TGG | - | chr5_3:21648353-21648372 | None:intergenic | 35.0% | |
| !! | CATGTTTGTCTTGGTCTTTT+AGG | + | chr5_3:21648351-21648370 | Msa0805170:intron | 35.0% |
| ATTGTTATGTATCTCACCCA+TGG | - | chr5_3:21648421-21648440 | None:intergenic | 35.0% | |
| ATGGGTGAGATACATAACAA+TGG | + | chr5_3:21648420-21648439 | Msa0805170:CDS | 35.0% | |
| AACTATCAGCGAATTCAAAC+AGG | + | chr5_3:21648508-21648527 | Msa0805170:three_prime_UTR | 35.0% | |
| ! | GAGTTTGGTGAAGAAACGTT+CGG | - | chr5_3:21643710-21643729 | None:intergenic | 40.0% |
| TTGGATCTGAGAAATGGAAG+TGG | - | chr5_3:21643752-21643771 | None:intergenic | 40.0% | |
| GATCCGGTTGTTTACGATAA+CGG | + | chr5_3:21643859-21643878 | Msa0805170:CDS | 40.0% | |
| ACACCGTTATCGTAAACAAC+CGG | - | chr5_3:21643865-21643884 | None:intergenic | 40.0% | |
| ATACTTGTCTTGTCGATGTC+TGG | + | chr5_3:21644275-21644294 | Msa0805170:intron | 40.0% | |
| TACTTGTCTTGTCGATGTCT+GGG | + | chr5_3:21644276-21644295 | Msa0805170:intron | 40.0% | |
| ! | AAGCTTTCGATTGGAAGTGT+TGG | + | chr5_3:21644308-21644327 | Msa0805170:intron | 40.0% |
| TGGTTATCCTCAATATACCG+AGG | + | chr5_3:21644433-21644452 | Msa0805170:CDS | 40.0% | |
| ATCTTTGCCTCGGTATATTG+AGG | - | chr5_3:21644443-21644462 | None:intergenic | 40.0% | |
| AGTTACTCAAAGACCTCCTA+TGG | + | chr5_3:21644502-21644521 | Msa0805170:CDS | 40.0% | |
| ! | TTGGTGTTTCTACTCGTATG+TGG | + | chr5_3:21645137-21645156 | Msa0805170:intron | 40.0% |
| ! | GGAGGGTATATTGATATGTG+TGG | + | chr5_3:21645167-21645186 | Msa0805170:intron | 40.0% |
| ATATGTGTGGTTATTGGCGA+GGG | + | chr5_3:21645180-21645199 | Msa0805170:intron | 40.0% | |
| GATTCTCCATGCTTATGGAT+TGG | + | chr5_3:21645373-21645392 | Msa0805170:intron | 40.0% | |
| TAATCAGCTAGTACACTTGG+GGG | + | chr5_3:21645398-21645417 | Msa0805170:intron | 40.0% | |
| ! | ATTTCTGGGAATACATGGGT+AGG | + | chr5_3:21645448-21645467 | Msa0805170:intron | 40.0% |
| ! | TTTCTGGGAATACATGGGTA+GGG | + | chr5_3:21645449-21645468 | Msa0805170:intron | 40.0% |
| CACTTTCCCATCCTTTAACT+TGG | - | chr5_3:21645590-21645609 | None:intergenic | 40.0% | |
| CAAGTTAAAGGATGGGAAAG+TGG | + | chr5_3:21645588-21645607 | Msa0805170:intron | 40.0% | |
| GCACACTCTTGAATATTCCT+AGG | - | chr5_3:21645672-21645691 | None:intergenic | 40.0% | |
| AGGTCGGTCATACTGAATAA+TGG | + | chr5_3:21645818-21645837 | Msa0805170:intron | 40.0% | |
| TCAGCTGTGAATGTATACAG+TGG | - | chr5_3:21645892-21645911 | None:intergenic | 40.0% | |
| ! | AGAGTGTTATTAGAGGCACA+AGG | + | chr5_3:21646037-21646056 | Msa0805170:CDS | 40.0% |
| !! | GCATTTTATGAAGGTGTGTC+CGG | + | chr5_3:21646226-21646245 | Msa0805170:intron | 40.0% |
| ! | CATTTTCAAATCGAGCCAAC+CGG | - | chr5_3:21646248-21646267 | None:intergenic | 40.0% |
| ATTTCTTTCATCCCTCCTGA+TGG | + | chr5_3:21646276-21646295 | Msa0805170:CDS | 40.0% | |
| ATCAAATCGAACGATCCATC+AGG | - | chr5_3:21646294-21646313 | None:intergenic | 40.0% | |
| ! | CGTTCGATTTGATGACATAC+AGG | + | chr5_3:21646301-21646320 | Msa0805170:CDS | 40.0% |
| !! | GGTTAAGCCTTTAATTTGGG+TGG | + | chr5_3:21646454-21646473 | Msa0805170:intron | 40.0% |
| !! | TCCTTTTAATTCACGCAGTG+AGG | + | chr5_3:21646626-21646645 | Msa0805170:intron | 40.0% |
| ACCTCACTGCGTGAATTAAA+AGG | - | chr5_3:21646630-21646649 | None:intergenic | 40.0% | |
| CAACTCAATCTCGACATTTG+TGG | - | chr5_3:21646725-21646744 | None:intergenic | 40.0% | |
| !! | TTAGGATTGGTTGCATCAAC+AGG | - | chr5_3:21646754-21646773 | None:intergenic | 40.0% |
| TGACGTTCGAACATTAGGAT+TGG | - | chr5_3:21646767-21646786 | None:intergenic | 40.0% | |
| TCCTAATGTTCGAACGTCAA+TGG | + | chr5_3:21646768-21646787 | Msa0805170:CDS | 40.0% | |
| CCTAATGTTCGAACGTCAAT+GGG | + | chr5_3:21646769-21646788 | Msa0805170:CDS | 40.0% | |
| GCTTCCTCATCTGTTATACT+GGG | - | chr5_3:21646993-21647012 | None:intergenic | 40.0% | |
| TGCTTCCTCATCTGTTATAC+TGG | - | chr5_3:21646994-21647013 | None:intergenic | 40.0% | |
| ! | CGTATAGGAGCTTTTCTTTC+AGG | - | chr5_3:21647020-21647039 | None:intergenic | 40.0% |
| GAGAACTGGACATCAGAAAA+AGG | + | chr5_3:21647450-21647469 | Msa0805170:intron | 40.0% | |
| TGGACATCAGAAAAAGGATC+TGG | + | chr5_3:21647456-21647475 | Msa0805170:intron | 40.0% | |
| TGGAGAGAAAGTGATAGTTC+AGG | - | chr5_3:21647514-21647533 | None:intergenic | 40.0% | |
| AAAGGACTAAAGGGATAGAC+GGG | - | chr5_3:21647610-21647629 | None:intergenic | 40.0% | |
| CAAAGGACTAAAGGGATAGA+CGG | - | chr5_3:21647611-21647630 | None:intergenic | 40.0% | |
| TTTCCGATTAGCAGATTCAC+TGG | + | chr5_3:21647793-21647812 | Msa0805170:intron | 40.0% | |
| AATAGGTCGAGTTTCAGTCA+TGG | - | chr5_3:21647856-21647875 | None:intergenic | 40.0% | |
| AGTTTGACATAGGAGACAGT+TGG | + | chr5_3:21648043-21648062 | Msa0805170:intron | 40.0% | |
| GTTTGACATAGGAGACAGTT+GGG | + | chr5_3:21648044-21648063 | Msa0805170:intron | 40.0% | |
| GGTAATCACCATGTTTGTCT+TGG | + | chr5_3:21648342-21648361 | Msa0805170:intron | 40.0% | |
| TATTGAGAAGAGTGGGTATC+AGG | + | chr5_3:21648390-21648409 | Msa0805170:CDS | 40.0% | |
| GGTGAGATACATAACAATGG+CGG | + | chr5_3:21648423-21648442 | Msa0805170:CDS | 40.0% | |
| GTGAGATACATAACAATGGC+GGG | + | chr5_3:21648424-21648443 | Msa0805170:CDS | 40.0% | |
| TATCAGCGAATTCAAACAGG+TGG | + | chr5_3:21648511-21648530 | Msa0805170:three_prime_UTR | 40.0% | |
| ! | TTGGGACTCTTTAGAGAAGT+TGG | + | chr5_3:21648541-21648560 | Msa0805170:three_prime_UTR | 40.0% |
| ! | GCTTGCGAATTCCTGATTTT+TGG | - | chr5_3:21648651-21648670 | None:intergenic | 40.0% |
| TTGGAGAAAAGGACTACACA+AGG | - | chr5_3:21648716-21648735 | None:intergenic | 40.0% | |
| !! | AATAACTTGTTTCCTCGCGG+TGG | + | chr5_3:21643484-21643503 | Msa0805170:five_prime_UTR | 45.0% |
| AAGAAGACGACGGAGAATTG+GGG | - | chr5_3:21643527-21643546 | None:intergenic | 45.0% | |
| GAAGAAGACGACGGAGAATT+GGG | - | chr5_3:21643528-21643547 | None:intergenic | 45.0% | |
| TGAAGAAGACGACGGAGAAT+TGG | - | chr5_3:21643529-21643548 | None:intergenic | 45.0% | |
| GTGGTGAATGAAGAAGACGA+CGG | - | chr5_3:21643537-21643556 | None:intergenic | 45.0% | |
| !! | TTGATGATGCGGTGGTTGAT+CGG | - | chr5_3:21643594-21643613 | None:intergenic | 45.0% |
| ACTTGTCTTGTCGATGTCTG+GGG | + | chr5_3:21644277-21644296 | Msa0805170:intron | 45.0% | |
| GCAATGGACAAGCTTTCGAT+TGG | + | chr5_3:21644299-21644318 | Msa0805170:intron | 45.0% | |
| ACAGCATTAGTCACTGCCAT+AGG | - | chr5_3:21644521-21644540 | None:intergenic | 45.0% | |
| CAGTGACTAATGCTGTGTCT+TGG | + | chr5_3:21644525-21644544 | Msa0805170:CDS | 45.0% | |
| ! | TCAGGTTTTCTTGGATGTGG+TGG | + | chr5_3:21644672-21644691 | Msa0805170:intron | 45.0% |
| CTACTCGTATGTGGATACTC+TGG | + | chr5_3:21645146-21645165 | Msa0805170:intron | 45.0% | |
| TCGTATGTGGATACTCTGGA+GGG | + | chr5_3:21645150-21645169 | Msa0805170:intron | 45.0% | |
| GATATGTGTGGTTATTGGCG+AGG | + | chr5_3:21645179-21645198 | Msa0805170:intron | 45.0% | |
| !! | GTACCGATTCTCCATGCTTA+TGG | + | chr5_3:21645368-21645387 | Msa0805170:intron | 45.0% |
| AATCAGCTAGTACACTTGGG+GGG | + | chr5_3:21645399-21645418 | Msa0805170:intron | 45.0% | |
| TTCCTGGGTATGTTGTTCCT+AGG | + | chr5_3:21645742-21645761 | Msa0805170:intron | 45.0% | |
| TTCCTAGGAACAACATACCC+AGG | - | chr5_3:21645747-21645766 | None:intergenic | 45.0% | |
| !! | TCGTGGGGGCATTTATTTCA+CGG | - | chr5_3:21645785-21645804 | None:intergenic | 45.0% |
| !! | CAAGTCTATCGCTTTTCCCT+TGG | - | chr5_3:21646071-21646090 | None:intergenic | 45.0% |
| CAAGGGAAAAGCGATAGACT+TGG | + | chr5_3:21646069-21646088 | Msa0805170:CDS | 45.0% | |
| ! | TTTATGAAGGTGTGTCCGGT+TGG | + | chr5_3:21646230-21646249 | Msa0805170:intron | 45.0% |
| AATCGAACGATCCATCAGGA+GGG | - | chr5_3:21646290-21646309 | None:intergenic | 45.0% | |
| AAATCGAACGATCCATCAGG+AGG | - | chr5_3:21646291-21646310 | None:intergenic | 45.0% | |
| GGAGTCAGTTTAAGGAACGT+AGG | + | chr5_3:21646531-21646550 | Msa0805170:CDS | 45.0% | |
| TTGGTTGCATCAACAGGAAC+AGG | - | chr5_3:21646748-21646767 | None:intergenic | 45.0% | |
| CCCATTGACGTTCGAACATT+AGG | - | chr5_3:21646772-21646791 | None:intergenic | 45.0% | |
| TGGAAAATTCGATCCTTCCC+TGG | + | chr5_3:21646829-21646848 | Msa0805170:CDS | 45.0% | |
| AAAATTCGATCCTTCCCTGG+AGG | + | chr5_3:21646832-21646851 | Msa0805170:CDS | 45.0% | |
| CCTCATCTGTTATACTGGGA+AGG | - | chr5_3:21646989-21647008 | None:intergenic | 45.0% | |
| CCTTCCCAGTATAACAGATG+AGG | + | chr5_3:21646986-21647005 | Msa0805170:CDS | 45.0% | |
| !! | CAGACAGAGGCATTGAATGA+AGG | - | chr5_3:21647161-21647180 | None:intergenic | 45.0% |
| AAGGACTAAAGGGATAGACG+GGG | - | chr5_3:21647609-21647628 | None:intergenic | 45.0% | |
| CGTCTATCCCTTTAGTCCTT+TGG | + | chr5_3:21647609-21647628 | Msa0805170:intron | 45.0% | |
| CCAGGAGAAAGAGAAAGTGA+GGG | - | chr5_3:21647681-21647700 | None:intergenic | 45.0% | |
| ACCAGGAGAAAGAGAAAGTG+AGG | - | chr5_3:21647682-21647701 | None:intergenic | 45.0% | |
| TCGAGTTTCAGTCATGGTTG+GGG | - | chr5_3:21647850-21647869 | None:intergenic | 45.0% | |
| GTCGAGTTTCAGTCATGGTT+GGG | - | chr5_3:21647851-21647870 | None:intergenic | 45.0% | |
| AGCGAATTCAAACAGGTGGA+TGG | + | chr5_3:21648515-21648534 | Msa0805170:three_prime_UTR | 45.0% | |
| GCGAATTCAAACAGGTGGAT+GGG | + | chr5_3:21648516-21648535 | Msa0805170:three_prime_UTR | 45.0% | |
| CGAATTCAAACAGGTGGATG+GGG | + | chr5_3:21648517-21648536 | Msa0805170:three_prime_UTR | 45.0% | |
| !!! | ATACTTTAAAAAAAAAAAAA+AGG | + | chr5_3:21645629-21645648 | Msa0805170:intron | 5.0% |
| ! | TCGGATTTGGAGCAGTGTTG+CGG | - | chr5_3:21643562-21643581 | None:intergenic | 50.0% |
| !! | TCGGTGGATTGGATCGGATT+TGG | - | chr5_3:21643575-21643594 | None:intergenic | 50.0% |
| !! | GGTTGATCGGTGGATTGGAT+CGG | - | chr5_3:21643581-21643600 | None:intergenic | 50.0% |
| ACCACCGCATCATCAATGTC+AGG | + | chr5_3:21643598-21643617 | Msa0805170:exon | 50.0% | |
| CCACCGCATCATCAATGTCA+GGG | + | chr5_3:21643599-21643618 | Msa0805170:exon | 50.0% | |
| CACCGCATCATCAATGTCAG+GGG | + | chr5_3:21643600-21643619 | Msa0805170:exon | 50.0% | |
| !! | TGCCCCTGACATTGATGATG+CGG | - | chr5_3:21643605-21643624 | None:intergenic | 50.0% |
| CTGTTCCTCCTCGACATCAA+AGG | + | chr5_3:21643634-21643653 | Msa0805170:CDS | 50.0% | |
| GAAGAAACGTTCGGCTTCGA+TGG | - | chr5_3:21643701-21643720 | None:intergenic | 50.0% | |
| GCATTAGTCACTGCCATAGG+AGG | - | chr5_3:21644518-21644537 | None:intergenic | 50.0% | |
| CTGTGTCTTGGCGAAGTGAA+GGG | + | chr5_3:21644537-21644556 | Msa0805170:CDS | 50.0% | |
| CTCGTATGTGGATACTCTGG+AGG | + | chr5_3:21645149-21645168 | Msa0805170:intron | 50.0% | |
| ATCAGCTAGTACACTTGGGG+GGG | + | chr5_3:21645400-21645419 | Msa0805170:intron | 50.0% | |
| !! | CGTGGGGGCATTTATTTCAC+GGG | - | chr5_3:21645784-21645803 | None:intergenic | 50.0% |
| GTGAAATAAATGCCCCCACG+AGG | + | chr5_3:21645784-21645803 | Msa0805170:intron | 50.0% | |
| TCCTAAAGAACACCTCGTGG+GGG | - | chr5_3:21645799-21645818 | None:intergenic | 50.0% | |
| CTCCTAAAGAACACCTCGTG+GGG | - | chr5_3:21645800-21645819 | None:intergenic | 50.0% | |
| CCTCCTAAAGAACACCTCGT+GGG | - | chr5_3:21645801-21645820 | None:intergenic | 50.0% | |
| ACCTCCTAAAGAACACCTCG+TGG | - | chr5_3:21645802-21645821 | None:intergenic | 50.0% | |
| ! | CGAGGTGTTCTTTAGGAGGT+CGG | + | chr5_3:21645802-21645821 | Msa0805170:intron | 50.0% |
| GGTATGCCCGAGTGTAAACT+TGG | + | chr5_3:21646004-21646023 | Msa0805170:CDS | 50.0% | |
| GCACAAGGCAGAACAACCAA+GGG | + | chr5_3:21646052-21646071 | Msa0805170:CDS | 50.0% | |
| GACATACAGGCTCAGTACAC+AGG | + | chr5_3:21646314-21646333 | Msa0805170:CDS | 50.0% | |
| TCGAAGATACCTTGCCTCCA+GGG | - | chr5_3:21646849-21646868 | None:intergenic | 50.0% | |
| TTCGAAGATACCTTGCCTCC+AGG | - | chr5_3:21646850-21646869 | None:intergenic | 50.0% | |
| ! | GAGGCAAGGTATCTTCGAAG+TGG | + | chr5_3:21646851-21646870 | Msa0805170:intron | 50.0% |
| GGATAGACGGGGAATAGCTT+AGG | - | chr5_3:21647598-21647617 | None:intergenic | 50.0% | |
| CCCTCACTTTCTCTTTCTCC+TGG | + | chr5_3:21647678-21647697 | Msa0805170:intron | 50.0% | |
| CGAGTTTCAGTCATGGTTGG+GGG | - | chr5_3:21647849-21647868 | None:intergenic | 50.0% | |
| GGTCGAGTTTCAGTCATGGT+TGG | - | chr5_3:21647852-21647871 | None:intergenic | 50.0% | |
| GGCAGTTAACGCCATCCAAA+TGG | + | chr5_3:21648077-21648096 | Msa0805170:intron | 50.0% | |
| TGGGTATCAGGCTCTTCCAT+GGG | + | chr5_3:21648402-21648421 | Msa0805170:CDS | 50.0% | |
| TCAAACAGGTGGATGGGGTT+TGG | + | chr5_3:21648522-21648541 | Msa0805170:three_prime_UTR | 50.0% | |
| CAAACAGGTGGATGGGGTTT+GGG | + | chr5_3:21648523-21648542 | Msa0805170:three_prime_UTR | 50.0% | |
| ! | GATTTGGAGCAGTGTTGCGG+TGG | - | chr5_3:21643559-21643578 | None:intergenic | 55.0% |
| ATGATGCGGTGGTTGATCGG+TGG | - | chr5_3:21643591-21643610 | None:intergenic | 55.0% | |
| !! | CCCTGACATTGATGATGCGG+TGG | - | chr5_3:21643602-21643621 | None:intergenic | 55.0% |
| GAAACGTTCGGCTTCGATGG+CGG | - | chr5_3:21643698-21643717 | None:intergenic | 55.0% | |
| ! | CTTGTCGATGTCTGGGGCAA+TGG | + | chr5_3:21644283-21644302 | Msa0805170:intron | 55.0% |
| GCTGTGTCTTGGCGAAGTGA+AGG | + | chr5_3:21644536-21644555 | Msa0805170:CDS | 55.0% | |
| TCCTGGGTATCAAGGTTCCC+AGG | + | chr5_3:21645518-21645537 | Msa0805170:intron | 55.0% | |
| TCCTGGGAACCTTGATACCC+AGG | - | chr5_3:21645522-21645541 | None:intergenic | 55.0% | |
| ! | CCCACGAGGTGTTCTTTAGG+AGG | + | chr5_3:21645798-21645817 | Msa0805170:intron | 55.0% |
| GGCACAAGGCAGAACAACCA+AGG | + | chr5_3:21646051-21646070 | Msa0805170:CDS | 55.0% | |
| AGATACCTTGCCTCCAGGGA+AGG | - | chr5_3:21646845-21646864 | None:intergenic | 55.0% | |
| TGGTGAGAGAGACAGCAGGA+AGG | - | chr5_3:21647226-21647245 | None:intergenic | 55.0% | |
| GCAATGGTGAGAGAGACAGC+AGG | - | chr5_3:21647230-21647249 | None:intergenic | 55.0% | |
| ! | AGACAGTTGGGTTGCCAACG+TGG | + | chr5_3:21648056-21648075 | Msa0805170:intron | 55.0% |
| GATGGCGTTAACTGCCACGT+TGG | - | chr5_3:21648073-21648092 | None:intergenic | 55.0% | |
| GTGGGTATCAGGCTCTTCCA+TGG | + | chr5_3:21648401-21648420 | Msa0805170:CDS | 55.0% | |
| TTGGAGCAGTGTTGCGGTGG+TGG | - | chr5_3:21643556-21643575 | None:intergenic | 60.0% | |
| GCGGTGGTTGATCGGTGGAT+TGG | - | chr5_3:21643586-21643605 | None:intergenic | 60.0% | |
| TGCGGCCTTTGATGTCGAGG+AGG | - | chr5_3:21643642-21643661 | None:intergenic | 60.0% | |
| GGATGCGGCCTTTGATGTCG+AGG | - | chr5_3:21643645-21643664 | None:intergenic | 60.0% | |
| TCAAAGGCCGCATCCTCGTC+TGG | + | chr5_3:21643650-21643669 | Msa0805170:CDS | 60.0% | |
| AGTCACGCCAGACGAGGATG+CGG | - | chr5_3:21643660-21643679 | None:intergenic | 60.0% | |
| GTGTGGTTATTGGCGAGGGC+TGG | + | chr5_3:21645184-21645203 | Msa0805170:intron | 60.0% | |
| ! | GCCCCCACGAGGTGTTCTTT+AGG | + | chr5_3:21645795-21645814 | Msa0805170:intron | 60.0% |
| TCGATCCTTCCCTGGAGGCA+AGG | + | chr5_3:21646837-21646856 | Msa0805170:CDS | 60.0% | |
| CTCGTCTGGCGTGACTACCG+CGG | + | chr5_3:21643664-21643683 | Msa0805170:CDS | 65.0% | |
| ACGACGTCGTTGCCACCGCG+AGG | - | chr5_3:21643499-21643518 | None:intergenic | 70.0% | |
| CGCGGTAGTCACGCCAGACG+AGG | - | chr5_3:21643666-21643685 | None:intergenic | 70.0% | |
| !! | CGATGGCGGAGACGTCGCCG+CGG | - | chr5_3:21643684-21643703 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 21643456 | 21648969 | 21643456 | ID=Msa0805170;Name=Msa0805170 |
| chr5_3 | mRNA | 21643456 | 21648969 | 21643456 | ID=Msa0805170-mRNA-1;Parent=Msa0805170;Name=Msa0805170-mRNA-1;_AED=0.10;_eAED=0.10;_QI=157|0.9|1|1|0.8|0.81|11|465|407 |
| chr5_3 | exon | 21643456 | 21643741 | 21643456 | ID=Msa0805170-mRNA-1:exon:8652;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21643841 | 21643987 | 21643841 | ID=Msa0805170-mRNA-1:exon:8653;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21644404 | 21644580 | 21644404 | ID=Msa0805170-mRNA-1:exon:8654;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21644676 | 21644779 | 21644676 | ID=Msa0805170-mRNA-1:exon:8655;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21646003 | 21646110 | 21646003 | ID=Msa0805170-mRNA-1:exon:8656;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21646239 | 21646335 | 21646239 | ID=Msa0805170-mRNA-1:exon:8657;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21646455 | 21646552 | 21646455 | ID=Msa0805170-mRNA-1:exon:8658;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21646717 | 21646858 | 21646717 | ID=Msa0805170-mRNA-1:exon:8659;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21646960 | 21647082 | 21646960 | ID=Msa0805170-mRNA-1:exon:8660;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21648373 | 21648668 | 21648373 | ID=Msa0805170-mRNA-1:exon:8661;Parent=Msa0805170-mRNA-1 |
| chr5_3 | exon | 21648702 | 21648969 | 21648702 | ID=Msa0805170-mRNA-1:exon:8662;Parent=Msa0805170-mRNA-1 |
| chr5_3 | five_prime_UTR | 21643456 | 21643612 | 21643456 | ID=Msa0805170-mRNA-1:five_prime_utr;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21643613 | 21643741 | 21643613 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21643841 | 21643987 | 21643841 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21644404 | 21644580 | 21644404 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21644676 | 21644779 | 21644676 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21646003 | 21646110 | 21646003 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21646239 | 21646335 | 21646239 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21646455 | 21646552 | 21646455 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21646717 | 21646858 | 21646717 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21646960 | 21647082 | 21646960 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | CDS | 21648373 | 21648471 | 21648373 | ID=Msa0805170-mRNA-1:cds;Parent=Msa0805170-mRNA-1 |
| chr5_3 | three_prime_UTR | 21648472 | 21648668 | 21648472 | ID=Msa0805170-mRNA-1:three_prime_utr;Parent=Msa0805170-mRNA-1 |
| chr5_3 | three_prime_UTR | 21648702 | 21648969 | 21648702 | ID=Msa0805170-mRNA-1:three_prime_utr;Parent=Msa0805170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
